BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780367|ref|YP_003064780.1| ribonuclease protein
[Candidatus Liberibacter asiaticus str. psy62]
(281 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|323464029|gb|ADX76182.1| ribonuclease BN-like family protein [Staphylococcus
pseudintermedius ED99]
Length = 445
Score = 225 bits (574), Expect = 5e-57, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +LS+FP ++F +L T+ +
Sbjct: 85 NFFNYLIYRIGKDDASGLAAQLAYYFMLSLFPMLIFILSLVPLFNIDS--DTITAQISKN 142
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + IT I V+ + GL +I + A + +SNG+ A+ + N AY V + R++
Sbjct: 143 APAETSSIITGIIDDVMGNASGGLLSIGLILALWTASNGMTAMMNAFNVAYDVEDSRNFV 202
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++L++ + LL +TL + +F + + + R +LA+
Sbjct: 203 VSKLLAIFFTLLIGITLPLTLVLFTFGEQIGNLLFGPLGLDEQVRWVFSLLRTALPVLAV 262
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ P K + S++PG +F+ I W++G++ F Y+ F+ YS Y + ++
Sbjct: 263 LIVFTIIYTLAPNVKIRFKSVIPGALFSTIVWILGSLAFGFYVSNFANYSKTYGSIGGVI 322
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY+ G I+GAE+NA + K
Sbjct: 323 VLMLWLYITGFILIIGAEINAIVHQRKVIK 352
>gi|319892923|ref|YP_004149798.1| Ribonuclease BN [Staphylococcus pseudintermedius HKU10-03]
gi|317162619|gb|ADV06162.1| Ribonuclease BN [Staphylococcus pseudintermedius HKU10-03]
Length = 445
Score = 222 bits (567), Expect = 3e-56, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +LS+FP ++F +L T+ +
Sbjct: 85 NFFNYLIYRIGKDDASGLAAQLAYYFMLSLFPMLIFILSLVPLFNIDS--DTITAQISKN 142
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + IT I V+ + GL +I + A + +SNG+ A+ + N AY V + R++
Sbjct: 143 APAETSSIITGIIDDVMGNASGGLLSIGLILALWTASNGMTAMMNAFNVAYDVEDSRNFV 202
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++L++ + LL +TL + +F + + + R +LA+
Sbjct: 203 VSKLLAIFFTLLIGITLPLTLVLFTFGEQIGNLLFGPLGLDEQVRWVFSLLRTALPVLAV 262
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ P K + S++PG +F+ I W++G++ F Y+ F+ YS Y + ++
Sbjct: 263 LIVFTIIYTLAPNVKIRFKSVIPGALFSTIVWILGSLAFGFYVSNFANYSKTYGSIGGVI 322
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY+ G I+GAE+NA + K
Sbjct: 323 VLMLWLYITGFILIIGAEINAIVHQRKVIK 352
>gi|325961896|ref|YP_004239802.1| YihY family protein [Arthrobacter phenanthrenivorans Sphe3]
gi|323467983|gb|ADX71668.1| YihY family protein [Arthrobacter phenanthrenivorans Sphe3]
Length = 404
Score = 208 bits (530), Expect = 6e-52, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 112/270 (41%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
I+ + F ++ +A+ ++ A+LS+FP I+ +L G G Q ++ +V G
Sbjct: 40 ILKKTLREFNKDQCPDLAAALTYYAVLSLFPAILALVSLIGLFGDPQKTTDALLQIVRGF 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P A + + + + PA GL I A + +S V A ++NR Y V E R +
Sbjct: 100 VPAETADTVGGVVSDLASAPAAGLTLIIGLATALWSASGYVGAFGRAMNRIYEVDEGRPF 159
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R LLA V + I++ + V V G L I + +
Sbjct: 160 VKLRGTMLVVTLLAVVIVAILAGMLVLSGPVAEAVGGLIGLSGVFLAIWDIAKWPVMVGL 219
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P K + G ++V ++ F Y+ F Y+ Y L
Sbjct: 220 IIVIIAVLYYATPNVKQPKFKWMSMGSGIALFVFLVASLGFGFYVGNFGNYNKTYGTLGG 279
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++L + + GAE +A M
Sbjct: 280 VIVMLLWLWILNMSLLFGAEFDAEMERGRQ 309
>gi|242371808|ref|ZP_04817382.1| ribonuclease BN [Staphylococcus epidermidis M23864:W1]
gi|242350509|gb|EES42110.1| ribonuclease BN [Staphylococcus epidermidis M23864:W1]
Length = 418
Score = 208 bits (530), Expect = 7e-52, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L G + V
Sbjct: 73 NFLKYLIYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLGQF-ITINTDQINHKVSQY 131
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A +T + G+ +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 132 IPDQSTADVVTKIFSSISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDARNG 191
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +++S Y L+ + V+ + P+ ++ + I RI ++
Sbjct: 192 IVLKILSVIYTLVLGIVFVVAIVLITLGPVISKFLFGPLGLDKQVEWIFDVVRIVLPLII 251
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ I ++ P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I
Sbjct: 252 IIILFTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGI 311
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++LY+ I+GAE+NA + K
Sbjct: 312 IILFLWLYITSFIIIIGAEINAIIHQRKVIK 342
>gi|223044001|ref|ZP_03614041.1| transporter [Staphylococcus capitis SK14]
gi|222442544|gb|EEE48649.1| transporter [Staphylococcus capitis SK14]
Length = 417
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L G + V
Sbjct: 73 NFLNYLIYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLGQF-ITINTDQINQKVSQY 131
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A IT + G+ +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 132 VPDQSTADVITKIFSGISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDSRNG 191
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ +++S Y L+ + V+ + P+ ++ + + RI ++
Sbjct: 192 FVLKILSVLYTLVLGIVFVVAIVLITLGPVISKFLFGPLGLDKQVEWVFDLVRIVLPLII 251
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ I ++ P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I
Sbjct: 252 IIILFTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGI 311
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++LY+ I+GAE+NA + K
Sbjct: 312 IILFLWLYITSFIIIIGAEINAIIHQRTVIK 342
>gi|73662219|ref|YP_301000.1| hypothetical protein SSP0910 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72494734|dbj|BAE18055.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 390
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 127/267 (47%), Gaps = 2/267 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + ++D +++ +S +LS+FP ++F ++ +G Q T+ D++
Sbjct: 73 NFFSYLVYRIGKDDASGLSAQLSYYFMLSLFPMLLFLLSIVPVVGVKQ--STIRDLIKDH 130
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A ++ I ++ + GL +I +AA + +SNG+ AL + N AY V + R++
Sbjct: 131 VPSDYAPQVSGIIGDIMENASGGLLSIGLIAALWSASNGMTALMNAFNVAYDVEDSRNFV 190
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L S + L + + + + + + + R ++ +
Sbjct: 191 VAKLYSVLFTLAMIIVMPVALVLPTFGQQIGDLLFGPLGLGDQVKWLFDTIRFVLPVIVV 250
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++ P K K++S++PG IF I ++ G+ LF YI F+ YS Y +A I+
Sbjct: 251 LIAFMVLYTLAPNVKIKLLSVIPGAIFATIVFLGGSYLFGIYISNFANYSKTYGSIAGII 310
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+++LY+ G I+GAE+NA
Sbjct: 311 ILMLWLYITGFIIIIGAEINAIFHQRK 337
>gi|269125476|ref|YP_003298846.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
gi|268310434|gb|ACY96808.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
Length = 445
Score = 202 bits (513), Expect = 6e-50, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 109/269 (40%), Gaps = 3/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ F E++ A+ ++ A+LS+FP ++ +L G G ++I V
Sbjct: 140 DLLKRTFREFKEDNLTDWAAALTYYAVLSIFPAMLVIISLIGL-GGASLSESIIRNVGDL 198
Query: 70 WPEVIAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + + ++ A A + I +AA + +S V A + N Y + E R
Sbjct: 199 APGAVRDVLATALTELQRGAGAAGLVAVIGLVAAVWSASGYVAAFMRASNAIYDLPEGRP 258
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ T I L++ L + V + + + ++
Sbjct: 259 IWKTLPIRIAVTLVSLTLLSASAIAVVISGPLARKAGDLLGLGDAAVTVWNIAKWPVLLV 318
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A+ ++ P AK + PG + W++ +V F Y+ F +Y+ Y LA
Sbjct: 319 AIAFLFALLYWASPNAKRGFTWVTPGGLLALAVWLLASVGFAFYVANFGSYNKTYGSLAG 378
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG ELNA +
Sbjct: 379 VIIFLVWLWISNIALLLGVELNAELQRAR 407
>gi|220911338|ref|YP_002486647.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
gi|219858216|gb|ACL38558.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
Length = 402
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 110/270 (40%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
I + F ++ +A+ ++ A+LS+FP I+ +L G G Q ++ +V G
Sbjct: 40 IAKKTLREFSKDQCPDLAASLTYYAVLSLFPAILALVSLVGLFGDPQKTTDALLQIVSGF 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + + PA G I A + +S V A +LNR Y V E R +
Sbjct: 100 VPGETMDTIGGVVKDLANAPAAGFTLVIGLGTALWSASGYVGAFGRALNRVYEVDEGRPF 159
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R LLA V + I++ + V V F G L + + ++
Sbjct: 160 VKLRGTMLAVTLLAIVIIAILAGMLVLSGPVAEAVGGFIGLSGVFLAVWNIAKWPVMVVL 219
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P K + G + +++ ++ F Y+ F Y+ Y L
Sbjct: 220 IIVIIAVLYYATPNVKQPKFKWMSMGSGIALVVFLLASLGFGFYVGNFGNYNKTYGALGG 279
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++L + + GAE +A
Sbjct: 280 VIVMLLWLWILNMSLLFGAEFDAETERGRQ 309
>gi|314934048|ref|ZP_07841411.1| YihY family protein [Staphylococcus caprae C87]
gi|313653159|gb|EFS16918.1| YihY family protein [Staphylococcus caprae C87]
Length = 417
Score = 199 bits (507), Expect = 3e-49, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ + +L++FP ++F L G + V
Sbjct: 73 NFLNYLIYRIGKDDASGLAAQMMYHFVLAMFPMLIFLLTLLGQF-ITINTDQINQKVSQY 131
Query: 70 WPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ A IT + G+ +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 132 VPDQSTADVITKIFSGISDSANGGVLSIGLILAIWSASNGMSAIINSFNVAYDVEDSRNG 191
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ +++S Y L+ + V+ + P+ ++ + + RI ++
Sbjct: 192 FVLKILSVLYTLVLGIVFVVAIVLITLGPVISKFLFGPLGLDKQVEWVFDLVRIVLPLII 251
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ I ++ P K+K+ S+LPG +FT I W+VG+ LF YI F Y+ Y LA I
Sbjct: 252 IIILFTVLYSVAPNVKTKLRSVLPGALFTSIIWLVGSFLFGWYISNFGNYNKTYGSLAGI 311
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++LY+ I+GAE+NA + K
Sbjct: 312 IILFLWLYITSFIIIIGAEINAIIHQRTVIK 342
>gi|111019911|ref|YP_702883.1| tRNA processing ribonuclease BN [Rhodococcus jostii RHA1]
gi|110819441|gb|ABG94725.1| tRNA processing ribonuclease BN [Rhodococcus jostii RHA1]
Length = 346
Score = 192 bits (489), Expect = 3e-47, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 112/273 (41%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ +I F + +A+ ++ A+LS+FP ++ +L G G + V+ +V
Sbjct: 28 WWYVIRKTAHEFTRDQCTDLAAALTYYAVLSLFPALLALVSLLGVFGQGQRTTDAVLQMV 87
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + D I Q++A P G+ + L A + +S + A ++NR Y V E
Sbjct: 88 DDLGPSSAVDTLRDPIAQLVAAPTAGMALVLGLLGAVWSASGYIGAFGRAMNRMYEVEEG 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + R ++ V + + + V L + R
Sbjct: 148 RPVWKLRPQMLAVTIVGLVLVAAAAAMLALSGPVARSVGDTIGFGDTALTVWNIARWPFV 207
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + + ++ P K I G ++W+V +VLF Y+ F +Y+ Y
Sbjct: 208 LGIVVVAVAILYYVTPNVKQPKFRWISAGAFLAIVTWIVASVLFGLYVANFGSYNKTYGS 267
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA ++ L++L++ + + GAEL+A +
Sbjct: 268 LAGVIVFLLWLWITNLALLFGAELDAELERGRE 300
>gi|329940661|ref|ZP_08289942.1| ribonuclease [Streptomyces griseoaurantiacus M045]
gi|329300722|gb|EGG44619.1| ribonuclease [Streptomyces griseoaurantiacus M045]
Length = 393
Score = 191 bits (485), Expect = 1e-46, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 106/270 (39%), Gaps = 4/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F ++ A+ ++ +LS+FP ++ + G G ++D V
Sbjct: 88 EVFKGTLREFKNDELTDRAAALTYYGVLSLFPALLVLVSFLGMTGK-STTDKLLDQVDSL 146
Query: 70 WPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + +T + Q+ G + + + A + +S + A + N Y V E R
Sbjct: 147 APGSASDIVTKAVRQLQDNGGTGSIMAVVGIVLALWSASGYIAAFIRTANAVYDVPEGRP 206
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + ++ V +I S + V L + + ++
Sbjct: 207 VWKVLPLRLAVTVVLMVLAIISSCIVVFTGGIAKRAGDALGLGDTALTVWSIAKWPVLVI 266
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ I + ++ P AK + I PG + + W+V + F Y+ F +Y+ Y +A
Sbjct: 267 LVTIMIAILYWSTPNAKVRGFRWITPGSLLALLIWLVASAGFAFYVANFGSYNKTYGTMA 326
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A
Sbjct: 327 GVIVFLVWLWISNLAILLGLEFDAETARQR 356
>gi|319399849|gb|EFV88096.1| YihY family protein [Staphylococcus epidermidis FRI909]
Length = 392
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 122/267 (45%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +L++FP ++F L G V
Sbjct: 66 NFFSYLIYRIGKDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQFITIDANQINQKVSQYV 125
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ A + + + + G+ ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 126 PDQETASIVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNGI 185
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S Y L+ V+ + P+ ++ + I RI ++ +
Sbjct: 186 VVKLLSILYTLVLGAVFVVAVVLITLGPVINKFLFGPLGIDNQIEWIFNLVRIVIPLIII 245
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI ++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I+
Sbjct: 246 FIIFTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGII 305
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
++LY+ I+GAE+NA +
Sbjct: 306 ILFLWLYITSFIIIIGAEINAIIHQRK 332
>gi|57867339|ref|YP_188990.1| ribonuclease BN [Staphylococcus epidermidis RP62A]
gi|251809911|ref|ZP_04824384.1| ribonuclease BN [Staphylococcus epidermidis BCM-HMP0060]
gi|282874567|ref|ZP_06283452.1| YihY family protein [Staphylococcus epidermidis SK135]
gi|293367803|ref|ZP_06614452.1| YihY family protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|57637997|gb|AAW54785.1| ribonuclease BN, putative [Staphylococcus epidermidis RP62A]
gi|251806576|gb|EES59233.1| ribonuclease BN [Staphylococcus epidermidis BCM-HMP0060]
gi|281296706|gb|EFA89215.1| YihY family protein [Staphylococcus epidermidis SK135]
gi|291318142|gb|EFE58539.1| YihY family protein [Staphylococcus epidermidis M23864:W2(grey)]
gi|329726921|gb|EGG63379.1| YihY family protein [Staphylococcus epidermidis VCU144]
gi|329734775|gb|EGG71081.1| YihY family protein [Staphylococcus epidermidis VCU045]
gi|329734799|gb|EGG71104.1| YihY family protein [Staphylococcus epidermidis VCU028]
Length = 392
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 122/267 (45%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +L++FP ++F L G V
Sbjct: 66 NFFSYLIYRIGKDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQFITIDANQINQKVSQYV 125
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ A + + + + G+ ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 126 PDQETASIVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNGV 185
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S Y L+ V+ + P+ ++ + I RI ++ +
Sbjct: 186 VVKLLSILYTLVLGAVFVVAVVLITLGPVINKFLFGPLGIDNQIEWIFNLVRIVIPLIII 245
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI ++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I+
Sbjct: 246 FIIFTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGII 305
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
++LY+ I+GAE+NA +
Sbjct: 306 ILFLWLYITSFIIIIGAEINAIIHQRK 332
>gi|27468486|ref|NP_765123.1| transporter [Staphylococcus epidermidis ATCC 12228]
gi|27316033|gb|AAO05167.1|AE016749_113 transporter [Staphylococcus epidermidis ATCC 12228]
Length = 392
Score = 190 bits (483), Expect = 2e-46, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 122/267 (45%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +L++FP ++F L G V
Sbjct: 66 NFFSYLIYRIGKDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQFITIDANQINQKVSQYV 125
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ A + + + + G+ ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 126 PDQETASIVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNGV 185
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S Y L+ V+ + P+ ++ + I RI ++ +
Sbjct: 186 VVKLLSILYTLVLGAVFVVAVVLITLGPVINKFLFGPLGIDNQIEWIFNLVRIVIPLIII 245
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI ++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I+
Sbjct: 246 FIIFTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGII 305
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
++LY+ I+GAE+NA +
Sbjct: 306 ILFLWLYITSFIIIIGAEINAIIHQRK 332
>gi|297196223|ref|ZP_06913621.1| ribonuclease BN family membrane protein [Streptomyces
pristinaespiralis ATCC 25486]
gi|197720035|gb|EDY63943.1| ribonuclease BN family membrane protein [Streptomyces
pristinaespiralis ATCC 25486]
Length = 390
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 116/279 (41%), Gaps = 7/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ F ++ ++ F +++ A+ ++ +L++FP ++ +L G +G
Sbjct: 85 LKKSFG---QVLRGTLKEFKDDELTDRAAALTYYGILALFPALLVLVSLLGIMG-QSTTQ 140
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
V++ + P IT+ + Q+ + G L I L A + +S V A S N
Sbjct: 141 KVLENIQQLAPGPARDVITNAVTQLQGSSSTGSILAIIGLLGALWSASGYVAAFIRSSNA 200
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y V E R + + G L + + + + + + + +
Sbjct: 201 VYDVPEGRPAWKVLPVRLGVTLALMIMACVSALIVILSGGIAQQLGTALGVGDTAMTVWT 260
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ + + + ++ P AK + I PG + W+V + F Y+ F +
Sbjct: 261 YAKWPVLVVLVSVMVALLYWATPNAKVRGFKWITPGSFIAVLIWLVASAGFAFYVANFGS 320
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y+ Y LA I+ LV+L++ + +LG E +A ++
Sbjct: 321 YNKTYGTLAGIIIFLVWLWITNLAILLGLEFDAELVRER 359
>gi|242241721|ref|ZP_04796166.1| ribonuclease BN [Staphylococcus epidermidis W23144]
gi|242234811|gb|EES37122.1| ribonuclease BN [Staphylococcus epidermidis W23144]
Length = 392
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 65/267 (24%), Positives = 122/267 (45%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I ++D +A+ ++ +L++FP ++F L G V
Sbjct: 66 NFFSYLIYRIGKDDAAGLAAQMTYHFVLALFPMLIFLLTLLGQFITIDANQINQKVSQYV 125
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ A + + + + G+ ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 126 PDQETASIVGGIVKDISDTASGGILSVGLILAIWSASNGMSAIINSFNVAYDVEDSRNGI 185
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S Y L+ V+ + P+ ++ + I RI ++ +
Sbjct: 186 VVKLLSILYTLVLGAVFVVAVVLITLGPVINKFLFGPLGIDNQIEWIFNLVRIVIPLIII 245
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI ++ P K+K+ S++PG IFT I W++G+ F +YI FS YS Y LA I+
Sbjct: 246 FIIFTVLYSVAPNVKTKLRSVIPGAIFTSIIWLLGSFAFGYYISNFSNYSKTYGSLAGII 305
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
++LY+ I+GAE+NA +
Sbjct: 306 ILFLWLYITSFIIIIGAEINAIIHQRK 332
>gi|226362631|ref|YP_002780409.1| ribonuclease [Rhodococcus opacus B4]
gi|226241116|dbj|BAH51464.1| putative ribonuclease [Rhodococcus opacus B4]
Length = 363
Score = 188 bits (478), Expect = 6e-46, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 116/273 (42%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ +I F ++ +A+ ++ A+LS+FP ++ +L G G + TV+ +V
Sbjct: 28 WWYVIRKTAHEFTRDECTDLAAALTYYAVLSLFPALLAMVSLLGVFGQGQRTTDTVLQIV 87
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + D I Q++ P+ G + L A + +S + A ++NR Y V E
Sbjct: 88 DDLGPSSAVDTLRDPITQLVQTPSAGAALILGLLGAVWSASGYIGAFGRAMNRIYEVEEG 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + R + L+ V + + + + V L + R
Sbjct: 148 RPVWKLRPLQLLVTLVGLVLVALAALMLAISGPVARSVGDAIGFGDTALTVWNIARWPFI 207
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + + ++ P + + G + ++W++ +VLF Y+ F +Y+ Y
Sbjct: 208 LGVVIVAVAILYYVTPNVQQPKFRWVSAGALVGIVTWILVSVLFGLYVSNFGSYNKTYGS 267
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA ++ L++L++ + + GAEL+A +
Sbjct: 268 LAGVIVFLLWLWITNLALLFGAELDAELERGRE 300
>gi|145224451|ref|YP_001135129.1| putative ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|145216937|gb|ABP46341.1| putative ribonuclease BN [Mycobacterium gilvum PYR-GCK]
Length = 401
Score = 188 bits (477), Expect = 9e-46, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 111/273 (40%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
++ F + +A+ ++ A+LS+FP +V +L G +G + V+ +V
Sbjct: 75 WLFVLRKTAREFTHDQCTDLAAALTYYAVLSLFPALVVVMSLLGVIGQSERTADAVLGIV 134
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + I Q++ P+ GL + + A + +S V A ++NR Y V E
Sbjct: 135 DDVSPGAAVDVLREPIQQLVNAPSAGLTLVLGIVGALWSASGFVGAFGRAMNRIYEVEEG 194
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + RL L+ + + + V + L + R
Sbjct: 195 RPGWKLRLQQLFLTLVGLIVAATAALLLAVSGPVAEAVGGYLGVGATGLTVWNIARWPLL 254
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + G+ ++ P + I G ++WV ++ F Y+ F Y+ +
Sbjct: 255 LVLVVFGVAMLYYVSPNVRQPKFRWISVGAAIAIVTWVCASLGFGFYVANFGNYNKTFGT 314
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA ++ L++L++ + + GAE++A +
Sbjct: 315 LAGVIVFLLWLWLTNLALLFGAEVDAELERGRQ 347
>gi|297625291|ref|YP_003687054.1| tRNA processing ribonuclease BN [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921056|emb|CBL55594.1| TRNA processing ribonuclease BN [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
Length = 364
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 103/270 (38%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ I F + +A+ ++ A+LS+FP ++ +L G +G V+ ++
Sbjct: 35 VLRKTIREFSSDQCTDIAASLTYYAVLSLFPCLIAIFSLLGVVGQGKAASDAVLGIIEQV 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I I Q+ P G L A + +S V A ++NR Y + E R +
Sbjct: 95 APGDTVDTIRGPIEQIAESPGAGFALITGILLAIWSASGYVGAFSRAMNRIYEIEEGRPF 154
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + ++ V LVI + + V + I + +
Sbjct: 155 WKLKPAQLLVTVITIVLLVIAAIILVVSGDVTKAIGDALGIGDVPQTIWSIAKWPLLIFI 214
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ P AK I G + I + F Y+ FS Y Y LA
Sbjct: 215 AVLVVAILYYATPNAKQPKFRWISMGALLAIIVLALATAAFGFYVGNFSNYDRTYGSLAG 274
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++ + + GAE +A +
Sbjct: 275 VIIFLLWLWIANLALLFGAEFDAELERGRQ 304
>gi|315444784|ref|YP_004077663.1| hypothetical protein Mspyr1_32120 [Mycobacterium sp. Spyr1]
gi|315263087|gb|ADT99828.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length = 401
Score = 187 bits (476), Expect = 1e-45, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 111/273 (40%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
++ F + +A+ ++ A+LS+FP +V +L G +G + V+ +V
Sbjct: 75 WLFVLRKTAREFTHDQCTDLAAALTYYAVLSLFPALVVVMSLLGVIGQSERTADAVLGIV 134
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + I Q++ P+ GL + + A + +S V A ++NR Y V E
Sbjct: 135 DDVSPGAAVDVLREPIQQLVNAPSAGLTLVLGIVGALWSASGFVGAFGRAMNRIYEVEEG 194
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + RL L+ + + + V + L + R
Sbjct: 195 RPGWKLRLQQLFLTLVGLIVAATAALLLAVSGPVAEAVGGYLGVGATGLTVWNITRWPLL 254
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + G+ ++ P + I G ++WV ++ F Y+ F Y+ +
Sbjct: 255 LVLVVFGVAMLYYVSPNVRQPKFRWISVGAAIAIVTWVCASLGFGFYVANFGNYNKTFGT 314
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA ++ L++L++ + + GAE++A +
Sbjct: 315 LAGVIVFLLWLWLTNLALLFGAEVDAELERGRQ 347
>gi|282866832|ref|ZP_06275868.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282558324|gb|EFB63890.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 360
Score = 187 bits (475), Expect = 2e-45, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 109/274 (39%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ + F +++ A+ ++ +LS+FP ++ +L G + V+D
Sbjct: 57 RSWWAVLRRTVREFADDELADRAAALTYYGVLSLFPALLVLVSLLG-IAGESATQQVMDN 115
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + ++D + Q+ G + + + A + +S + A S N Y +
Sbjct: 116 LRKLAPGPVRDILSDAVEQLQGNGGTGSLMAVLGLVLALWSASGYIAAFIRSSNAVYDIP 175
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + + V V+ + + V L +
Sbjct: 176 EGRPVWKVLPLRLALTVTLMVLAVVSALIVVFTGPLAQRAGSALGVGDTALTAWSIAKWP 235
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + + + ++ P A+ + + PG + W++ + F Y+ FS+Y+ Y
Sbjct: 236 VLVLLVTVMIALLYWAAPNARGRGFKWVTPGSFLALLLWMIASAGFALYVAYFSSYNKTY 295
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA ++ LV+L++ + +LG E +A M
Sbjct: 296 GALAGVIVFLVWLWITNLAILLGLEFDAEMARQR 329
>gi|229492024|ref|ZP_04385838.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
gi|229321048|gb|EEN86855.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 516
Score = 187 bits (474), Expect = 2e-45, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 108/273 (39%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ F + +A+ ++ A+LS+FP I+ +L G G Q + +
Sbjct: 30 WLYVLRSTARQFSRDQCTDLAAALTYYAVLSLFPAILAVVSLLGVFGQGQSTVDAVLQIV 89
Query: 68 GAWPEVIA-KPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
GA A + I Q++ PA G A + +S V A ++NR Y V E
Sbjct: 90 GALGPSSAVDTLRGPIQQLVQAPAAGFALIAGIAGALWSASGYVGAFGRAMNRMYEVDEG 149
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + R + ++A + + + + A L + R
Sbjct: 150 RPVWKLRPVMLLVTIVALTLIGCAAAMLAISGPVARAIGDVIGAGDTALTVWNIARWPVV 209
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + ++ P + I G + W++ +V F Y+ FS+Y+ Y
Sbjct: 210 LVFVVLAVAILYYATPNIQQPKFRWISGGAALAIVVWILASVGFGFYVANFSSYNKTYGS 269
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA + L++L++ + + GAEL++ +
Sbjct: 270 LAGAIVFLLWLWITNLALLFGAELDSELERGRQ 302
>gi|262202449|ref|YP_003273657.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085796|gb|ACY21764.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 349
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 114/273 (41%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
V+ I F + +A+ ++ A+LS+FP ++ +L G G + V V+ +V
Sbjct: 28 VWYITRKVAREFSRDQCTDLAAALTYYAVLSLFPALLAVVSLLGVFGQGQRTVDAVLQMV 87
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + D + Q+++ P+ G + A + +S V A ++NR Y + E
Sbjct: 88 DDVGPSSAVDTLRDPVQQLVSAPSAGFALVLGLAGALWSASGYVGAFGRAMNRMYEIDEG 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + R +A + ++ + V A L + R
Sbjct: 148 RPIWKLRPQMLLVTAVALLMAGAIAVMLAISGPVAKAVGDAIGAGDAALTVWNIARWPLV 207
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + ++ P K I G + W++ +VLF Y+ FS+Y+ Y
Sbjct: 208 LIFAILVVAILYYSTPNVKQPKFRWISIGATVAIVVWILASVLFGLYVANFSSYNKTYGA 267
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA ++ L++L++ + + GAE++A ++
Sbjct: 268 LAGVVVFLLWLWITNLALLFGAEIDAELVRGRQ 300
>gi|330685613|gb|EGG97259.1| YihY family protein [Staphylococcus epidermidis VCU121]
Length = 411
Score = 186 bits (472), Expect = 4e-45, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + ++D +A+ ++ +L++FP ++F L F Q I + +
Sbjct: 71 NFFSYLVYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLPFFNIEQSQ---ITSMLSS 127
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I V + GL ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 128 APSETSSIIKGVIGDVTKNSSGGLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 187
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V I + Y+ + + R+ ++ +
Sbjct: 188 LLKLLSVVFTVVMGVVFAIAMALPTLGSAISHYLFGPLGLDSEVKWVFNLIRVVLPLIII 247
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ I ++ P K+KI+S+LPG IFT I W++G+ F YI F YS Y +A I+
Sbjct: 248 LVLFIVLYSVAPNVKTKILSVLPGAIFTSIIWLLGSFAFGWYISNFGNYSKTYGSIAGII 307
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + + K
Sbjct: 308 ILLIWLYLTSFIIIIGAEINAIIHQRHVIK 337
>gi|332701683|ref|ZP_08421771.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
gi|332551832|gb|EGJ48876.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
Length = 373
Score = 186 bits (471), Expect = 4e-45, Method: Composition-based stats.
Identities = 57/275 (20%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DI+ +++ +A+ ++ A+L++FP I ++ G L + + I V
Sbjct: 78 WRDILKRTWAEQSKDNLSLVAAGVAFYAMLALFPAIAALISIYGLLADPAQLQSQIGEVS 137
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVE 124
G P I ++ +V++ L + L A + +S G++ L +LN +Y E
Sbjct: 138 GVLPGDARSIIQSQLSKVVSGAGGALSLGAAVGLLLALWSASKGMKGLIQALNISYGEEE 197
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + IS + + ++ VA+P L ++ + R
Sbjct: 198 SRGFLKLNAISLLLTVSGLIFFILALTAVVAMPALL----DNLGLPDAVMWTVSIARWPL 253
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LA + L ++ + P + + G ++W+ ++LF+ Y+ F Y+ Y
Sbjct: 254 LALAGMLALAVLYRYAPDRDEPRWRWVSWGSAGATMAWIAASLLFSLYVSQFGNYNETYG 313
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ L +L++ +LGAELNA M +
Sbjct: 314 TLGAVVILLTWLFLTAYVVLLGAELNAEMERQTRK 348
>gi|300114181|ref|YP_003760756.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540118|gb|ADJ28435.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 447
Score = 186 bits (471), Expect = 5e-45, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 115/270 (42%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E+ +A+ ++ ALL++FP + ++ G + V ++ + G
Sbjct: 32 DVLLRVKNELSEDKLTVIAAGVAFYALLAIFPALTALVSIYGLVADPADVQQQLNTLSGF 91
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D++ + A L S L A + ++ G++ L +LN Y E R
Sbjct: 92 IPAEAQTLLNDQLSSITAHSQTALGVGVIGSILLALWGATKGLKTLMEALNVVYDEKETR 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + A + VI + VA+P L F ++ + R
Sbjct: 152 GFLKLNATALILTFGALMLGVIAIGLVVALPALLG----NFGLGADVRTWVSLLRWPVLA 207
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+GL V+ + P+ + + + G + + W+ +V F++Y+ FS+Y+ Y L
Sbjct: 208 FVAMLGLAVVYRYGPSRSQPRWHWVSWGAVLATVLWIAASVGFSYYVSNFSSYNETYGSL 267
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
++ L++L++ +LGAELNA M
Sbjct: 268 GGVVVFLMWLFITAFIILLGAELNAEMEHQ 297
>gi|170739721|ref|YP_001768376.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168193995|gb|ACA15942.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 386
Score = 185 bits (470), Expect = 6e-45, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 122/273 (44%), Gaps = 4/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+Y F ++ ++A+ ++ LL++FP I +L G + + ++ G
Sbjct: 89 DILYRVYVEFQKDRVLSVAAGVTFYTLLAIFPAIAALVSLYGLFTDPATINDHLSLLQGV 148
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I D++ ++ A L S + + ++ GV+A+ +LN Y E R
Sbjct: 149 LPSGALDIIGDQVKRITAKGGTTLGLTFFTSLAISLWSANAGVKAIFDALNIVYEEEEKR 208
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L S + L + +V V +P+ L +V F ++ I R +
Sbjct: 209 SFIRLNLQSLAFTLGGLLFVVFALTGIVVLPVILNFVGTFGISISPKAWYIALLRWPILL 268
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + L ++ + P+ K + + PG + + W++G++ F+ Y+ F +Y+ Y L
Sbjct: 269 AVLLLALAVLYRYGPSRDKPQWRWVTPGSLIAGVVWIIGSIAFSWYVAHFGSYNETYGSL 328
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ +LG E+NA + R
Sbjct: 329 GAAVGFMTWIWISATIVLLGGEINAELEHQTIR 361
>gi|239638059|ref|ZP_04679018.1| transporter [Staphylococcus warneri L37603]
gi|239596342|gb|EEQ78880.1| transporter [Staphylococcus warneri L37603]
Length = 411
Score = 185 bits (469), Expect = 7e-45, Method: Composition-based stats.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + ++D +A+ ++ +L++FP ++F L F Q I + +
Sbjct: 71 NFFSYLVYRIGKDDASGLAAQMTYHFVLAMFPMLIFLLTLLPFFNIEQSQ---ITNMLSS 127
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I V + GL ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 128 APSETSSIIKGVIGDVTKNSSGGLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 187
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V I + Y+ + + R+ ++ +
Sbjct: 188 LLKLLSVVFTVVMGVVFAIAMALPTLGSAISHYLFGPLGLDSEVKWVFNLIRVVLPLIII 247
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ I ++ P K+KI+S+LPG IFT I W++G+ F YI F YS Y +A I+
Sbjct: 248 LVLFIVLYSVAPNVKTKILSVLPGAIFTSIIWLLGSFAFGWYISNFGNYSKTYGSIAGII 307
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + + K
Sbjct: 308 ILLIWLYLTSFIIIIGAEINAIIHQRHVIK 337
>gi|254381761|ref|ZP_04997125.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194340670|gb|EDX21636.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 379
Score = 184 bits (468), Expect = 9e-45, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 106/274 (38%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ ++ F +++ A+ ++ +L++FP ++ +L G G V+D
Sbjct: 44 RSWKAVLRGTLKEFKDDELADRAAALTYYGVLALFPALLVLVSLIGLAG-ESATKEVLDN 102
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V P +TD + Q+ G L + + A + +S + A + N Y +
Sbjct: 103 VQKLAPGSARDVVTDAVQQIQGHSGVGSLLAIVGLVVAVWSASGYIAAFIRASNAVYDMP 162
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + + V + + V V L + +
Sbjct: 163 EGRPVWKVLSLRMALTVTLMVLACASALIVVFSGNLARQVGSSLGIGDTALTVWSIVKWP 222
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + I + ++ P AK + + PG W+ + F Y+ F +Y+ Y
Sbjct: 223 VLVILVTIMIALLYWAAPNAKGRGFKWVSPGSFLALAIWMAASAGFAFYVANFGSYNKTY 282
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA ++ LV+L++ + +LG E +A ++
Sbjct: 283 GTLAGVIVFLVWLWITNLAILLGLEFDAELVRQR 316
>gi|116668913|ref|YP_829846.1| putative ribonuclease BN [Arthrobacter sp. FB24]
gi|116609022|gb|ABK01746.1| putative ribonuclease BN [Arthrobacter sp. FB24]
Length = 377
Score = 184 bits (468), Expect = 1e-44, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 112/270 (41%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
I F ++ +A+ ++ ++LS+FP ++ +L G G + ++D+V G
Sbjct: 53 IAKKTFREFTKDQCPDLAAALTYYSVLSIFPALLALVSLLGIFGDAQKTTSGLLDIVQGI 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + + + PA G I L A + +S V A ++NR Y V E R +
Sbjct: 113 APGDTVNTIRPVVEDLSSSPAAGFTLVIGLLTALWSASGYVGAFGRAMNRVYEVDEGRPF 172
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R G ++ + +V+++ + V V L + + ++
Sbjct: 173 LKLRGTMLGVTVVNLLIVVVLAAMLVLSGPVAESVGNVIGLGDAFLAVWNIAKWPVMLVL 232
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + P K + G + +++ ++ F Y+ F++Y+ Y +
Sbjct: 233 VIAAIAVLFYATPNVKQPKFRWMSMGSAIALVVFLLASLAFGFYVANFNSYNKTYGAIGG 292
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++L + + GAE +A M
Sbjct: 293 VIIALLWLWILNMSLLFGAEFDAEMERGRQ 322
>gi|29827533|ref|NP_822167.1| ribonuclease BN family membrane protein [Streptomyces avermitilis
MA-4680]
gi|29604633|dbj|BAC68702.1| putative membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 393
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 108/269 (40%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ +L G G V+ V
Sbjct: 93 VLKGSLREFKDDELTDRAAALTYYGVLALFPALLVLVSLLGITGK-STTDKVLTNVQKLA 151
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + I + A + +S V A + N Y + E R
Sbjct: 152 PGSARDIITRAVEQLQNNAGTGSVVAIIGLVLAVWSASGYVAAFIRASNAVYDIPEGRPV 211
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ I G ++ V VI + + V L + + ++
Sbjct: 212 WKILPIRVGVTVVLMVLAVISALIVVFTGGLARQAGDALGIGDTALTVWSIAKWPVLVIL 271
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P AK K I PG + W++ + F Y+ F++Y+ Y +A
Sbjct: 272 VTLMIAILYWASPNAKVKGWRWITPGSFLALVIWMIASAGFAFYVANFASYNKTYGTMAG 331
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A
Sbjct: 332 VIVFLVWLWITNLAILLGLEFDAETARQR 360
>gi|325676097|ref|ZP_08155779.1| tRNA processing ribonuclease BN [Rhodococcus equi ATCC 33707]
gi|325553137|gb|EGD22817.1| tRNA processing ribonuclease BN [Rhodococcus equi ATCC 33707]
Length = 362
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 112/270 (41%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ F + +A+ ++ A+L++FP ++ +L G G + V V+++V
Sbjct: 37 VLRKTAREFGTDQCTDLAAALTYYAVLALFPALLVIVSLLGVFGQGQRTVDAVMEMVGQL 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + Q++A P+ G+ I L A + +S V A ++NR Y + E R
Sbjct: 97 GPTNAVDTLREPVEQLVAAPSAGIALVIGVLGALWSASGYVGAFARAMNRIYEIEEGRPI 156
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R + F V + + V V + + +L
Sbjct: 157 WKLRPLMFVVTAFCLVAVGASGLMLVISGPVARSVGDVLGLGDAAVTAWDIAKWPVLLLV 216
Query: 189 LFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P + K I PG + W+ + LF Y+ F++Y+ Y LA
Sbjct: 217 VGVLVAVLYYVTPNVSQPKFRWISPGAAIAIVVWIGASALFAVYVSNFASYNKTYGSLAG 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L++ + + GAE +A +
Sbjct: 277 AVVFLLWLWITNLALLFGAEFDAELERGRE 306
>gi|312137801|ref|YP_004005137.1| ribonuclease bn [Rhodococcus equi 103S]
gi|311887140|emb|CBH46449.1| ribonuclease BN [Rhodococcus equi 103S]
Length = 362
Score = 184 bits (466), Expect = 2e-44, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 112/270 (41%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ F + +A+ ++ A+L++FP ++ +L G G + V V+++V
Sbjct: 37 VLRKTAREFGTDQCTDLAAALTYYAVLALFPALLVIVSLLGVFGQGQRTVDAVMEMVGQL 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + Q++A P+ G+ I L A + +S V A ++NR Y + E R
Sbjct: 97 GPTNAVDTLREPVEQLVAAPSAGIALVIGVLGALWSASGYVGAFARAMNRIYEIEEGRPI 156
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R + F V + + V V + + +L
Sbjct: 157 WKLRPLMFVVTAFCLVAVGASGLMLVISGPVARSVGDVLGLGDAAVTAWDIAKWPVLLLV 216
Query: 189 LFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P + K I PG + W+ + LF Y+ F++Y+ Y LA
Sbjct: 217 VGVLVAVLYYVTPNVSQPKFRWISPGAAIAIVVWIGASALFAVYVSNFASYNKTYGSLAG 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L++ + + GAE +A +
Sbjct: 277 AVVFLLWLWITNLALLFGAEFDAELERGRE 306
>gi|290961371|ref|YP_003492553.1| hypothetical protein SCAB_70211 [Streptomyces scabiei 87.22]
gi|260650897|emb|CBG74014.1| putative membrane protein, ribonuclease-like [Streptomyces scabiei
87.22]
Length = 365
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 110/274 (40%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ + F +++ A+ ++ +LS+FP I+ ++ G +G + ++D
Sbjct: 44 RSWWAVVRRTAKEFQDDELSDRAAALTYYGVLSLFPAILVLVSMLGVVG-QRATDRILDN 102
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + D ++Q+ G L + LAA + +S V A + N Y +
Sbjct: 103 IGDLAPGPARDILRDAVVQLSDSGGTGGLLAIVGLLAAVWSASGYVAAFIRTSNAVYDLP 162
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + G L+ V L + + V G + + +
Sbjct: 163 EGRPAWKVTPLRIGLTLVLMVMLAASALIVVFTGPLAERAGTTIGLGGAAIAVWNIAKWP 222
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + + + ++ P + + + PG I + W+ + F Y F +Y+ Y
Sbjct: 223 VLLVLVTLMIALLYWAAPNVRGRGFRWVSPGGIVATLIWLAASAGFAVYAANFGSYNKTY 282
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA + L++L++ + +LG E +A +
Sbjct: 283 GTLAGAVVFLIWLWLTNLAILLGLEFDAELSRER 316
>gi|220921071|ref|YP_002496372.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219945677|gb|ACL56069.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 386
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 121/273 (44%), Gaps = 4/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++Y F ++ ++A+ ++ LL++FP I +L G + + I ++ G
Sbjct: 89 DVLYRVYLEFQKDRVLSVAAGVTFYTLLAMFPAIAALVSLYGLIADPATINDHIALLQGV 148
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I +++ ++ + L + + ++ GV+A+ +LN Y E R
Sbjct: 149 LPSGALDIIGEQVKRISSKGGTTLGLTFFTTLALSLWSANAGVKAIFDALNIVYEEEEKR 208
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L S + L + +V+ V +P+ L ++ F ++ I R +
Sbjct: 209 SFIKLNLQSLTFTLGGLLFVVVALSGIVVLPVILNFIGNFGISISPKAWYIALLRWPLLL 268
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L ++ + P+ K + PG + + W+VG++ F+ Y+ F +Y+ Y L
Sbjct: 269 AILLFALALLYRYGPSRDEPKWRWVTPGSLIAGVVWLVGSIAFSWYVAHFGSYNETYGSL 328
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ +LG E+NA M R
Sbjct: 329 GAAIGFMTWIWISATIVLLGGEINAEMEHQTVR 361
>gi|302548984|ref|ZP_07301326.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
gi|302466602|gb|EFL29695.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
Length = 389
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 110/269 (40%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ +L++FP ++ ++ G G V++ V
Sbjct: 89 VLKGSLREFKDDELTDRAAALTYYGVLAMFPALLVLVSILGLTGR-STTDKVLENVQQFA 147
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + + + A + +S V A S N Y + E R
Sbjct: 148 PGSARDIITRAVEQLQGNAGVGSLMAVVGLVLAVWSASGYVAAFIRSANAVYDIPEGRPV 207
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G ++ V V + + V L + + ++
Sbjct: 208 WKLLPVRVGVTVVLMVLAVFSALIVVFTGGLARQAGSVLGIGDTALTVWSIAKWPVLVVL 267
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ I + ++ P AK K I PG + + W+V + F Y+ F++Y+ Y +A
Sbjct: 268 VTIMIAILYWATPNAKVKGFRWITPGSVLALLIWLVASAGFAVYVANFASYNKTYGTMAG 327
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 328 VIVFLVWLWITNLAILLGLEFDAETVRQR 356
>gi|302539626|ref|ZP_07291968.1| ribonuclease BN [Streptomyces hygroscopicus ATCC 53653]
gi|302457244|gb|EFL20337.1| ribonuclease BN [Streptomyces himastatinicus ATCC 53653]
Length = 395
Score = 182 bits (462), Expect = 5e-44, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 106/269 (39%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ ++ F +++ A+ ++ +LS+FP ++ +L G + V+ +
Sbjct: 95 VFKGSLREFKDDELTDRAAALTYYGVLSLFPALLVLVSLVG-IAGKSTTDEVLSNLKQLA 153
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + + A + +S V A + N Y + E R
Sbjct: 154 PGSARDLITRTVEQLQGNGGTGSIMAITGLVLAVWSASGYVAAFIRASNAVYEMPEGRPA 213
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G ++ V V + + V L + + ++
Sbjct: 214 WKILPVRVGVTVVLMVLTVASALIVVFTGGLARQTGAALGIGDTTLTVWSIAKWPVLVIL 273
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + L ++ P AK K I PG + W++ + FT Y+ F++Y+ Y +A
Sbjct: 274 ITVMLALLYWAAPNAKVKKFRWITPGSFLALVIWMIVSAGFTFYVANFASYNKTYGTMAG 333
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A
Sbjct: 334 VIVFLVWLWISNLAILLGLEFDAETARQR 362
>gi|222151855|ref|YP_002561015.1| hypothetical protein MCCL_1612 [Macrococcus caseolyticus JCSC5402]
gi|222120984|dbj|BAH18319.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
Length = 342
Score = 181 bits (460), Expect = 7e-44, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 123/267 (46%), Gaps = 2/267 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + ++D +++ ++ LLS+FP ++F L T+ +++
Sbjct: 73 NFLSMLLFRIGKDDAAGLSAQLAYYFLLSLFPMLIFLLTLVPLFKVSP--ETITNMIAKN 130
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A ITD I V+ GL + +AA + +SNG+ AL + N +Y V + R+
Sbjct: 131 APGDAANMITDVISDVMNNANGGLLSFGLIAALWSASNGMTALMNAFNVSYEVEDARNPI 190
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++L+S + ++ + + + V Y+ F I ++ ++
Sbjct: 191 VSKLLSVLFTVVMVLVFGVALALPVFGEQIGNYLFGQFGLESQFKWIFSLVKVALPLIVT 250
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI ++ P K + S++PG +F I W+ + LF +Y+ F YS Y + I+
Sbjct: 251 FIVFTTLYAIAPNIKLQFKSVIPGALFATIVWIGASFLFGYYVSNFGNYSKTYGSIGGII 310
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+++LY+ G I+G+++NA +
Sbjct: 311 VLMLWLYLTGFIIIIGSQINAIIHEKK 337
>gi|297204191|ref|ZP_06921588.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197714118|gb|EDY58152.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 359
Score = 181 bits (460), Expect = 8e-44, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 112/269 (41%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ F +++ A+ ++ LLS+FP I+ ++ G G TV+ +
Sbjct: 53 VLRGSLREFKDDELTDRAAALTYYGLLSLFPAILVLVSMLGLTGKSAT-DTVLKNLKQFT 111
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P IT + Q+ G + + + A + +S V A S NR Y + E R
Sbjct: 112 PGSARDIITGAVEQLQGNAGVGSVMAIVGLVLAVWSASGYVAAFMRSANRVYDMPEGRPI 171
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G ++ V V+ + + V L + + ++
Sbjct: 172 WKILPVRVGLTVVLMVLAVVSALIVVFTGTLAHKAGTALGIGDTALTVWAIAKWPVLVVL 231
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ I + ++ P A+ K I PG + + W++ + F Y+ F++Y+ Y +A
Sbjct: 232 VTIMIALLYWATPNARVKGFRWITPGSVLALLIWLIASAGFAFYVANFASYNKTYGTMAG 291
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 292 VIVFLVWLWISNLAILLGLEFDAETVRQR 320
>gi|319948212|ref|ZP_08022371.1| TRNA processing ribonuclease BN [Dietzia cinnamea P4]
gi|319438147|gb|EFV93108.1| TRNA processing ribonuclease BN [Dietzia cinnamea P4]
Length = 357
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 113/269 (42%), Gaps = 3/269 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAW 70
I A+ F + +A+ ++ A+LS+FP ++ +L G G V V++++ GA
Sbjct: 38 IKRALSEFSRDKCTDLAASLTYFAVLSLFPALLAVVSLLGVFGQGQATVDAVMELLEGAA 97
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I V+ PA G+ A + +S V A ++NR Y + E R ++
Sbjct: 98 PEETLAALRGPIESVVNTPAAGIALITGLAGALWSASGYVGAFGRAMNRIYEIEEGRPFW 157
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ ++ + + + + + V + + + + +L +
Sbjct: 158 KLKPVTVLLTAVLLLLVCLAGLILVVSGPIAEWAGNLIGLGETAVTVWGIAKWPVLVLVV 217
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ L ++ F P K I G + I W V F Y+ FS+Y+ Y LA +
Sbjct: 218 VVILAVLYGFAPNVKQPKFRWISIGAVIALIVWAVATGGFVFYVTNFSSYNATYGSLAGV 277
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L++ + GAE++A +
Sbjct: 278 IIFLLWLWITNNALLFGAEVDAEVERARE 306
>gi|315504286|ref|YP_004083173.1| ribonuclease bn [Micromonospora sp. L5]
gi|315410905|gb|ADU09022.1| ribonuclease BN [Micromonospora sp. L5]
Length = 363
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 106/268 (39%), Gaps = 3/268 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F ++ A+ ++ +LS+FP ++ ++ G LG V
Sbjct: 65 LKRTVREFQDDSLTDWAAALTYYGVLSIFPGVLVLISVLGLLGDRATEGVRDTVGQAVPE 124
Query: 72 EVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
E I + I I Q A + +AA + +S V A + N Y V E R +
Sbjct: 125 ENIRRIIESAIDQAGQSGGLASIAAIVGLVAAFWSASGYVAAFMRASNSIYDVPEGRPIW 184
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
T + G + V L+I + + V + + + ++ +
Sbjct: 185 KTLPVRLGVTAVIGVMLLISAVIVVFTGGLAEQAGNAIGLGETAVTVWNIAKWPVLLVLV 244
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ P A+ + PG + + W+V + LF Y+ F +Y+ Y +A +
Sbjct: 245 SLMFAILYWASPNARHGGFRWVSPGGVLAVVLWLVVSGLFALYVSNFGSYNKTYGAVAGV 304
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ LV+L++ V +LGAE +A +
Sbjct: 305 IIFLVWLWLSNVAILLGAEFDAELERSR 332
>gi|302869239|ref|YP_003837876.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|302572098|gb|ADL48300.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
Length = 363
Score = 181 bits (459), Expect = 1e-43, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 5/269 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++ F ++ A+ ++ +LS+FP ++ ++ G LG + V D V A P
Sbjct: 65 LKRTVQEFQDDSLTDWAAALTYYGVLSIFPGVLVLISVLGLLG-ERATEGVRDTVGQAVP 123
Query: 72 EVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E + I + + + +AA + +S V A + N Y V E R
Sbjct: 124 EENIRRIIESAIDQAGQSGGLASIAAIVGLVAAFWSASGYVAAFMRASNSIYDVPEGRPI 183
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ T + G + V L+I + + V + + + ++
Sbjct: 184 WKTLPVRLGVTAVIGVMLLISAVIVVFTGGLAEQAGNAIGLGETAVTVWNIAKWPVLLVL 243
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ P A+ + PG + + W+V + LF Y+ F +Y+ Y +A
Sbjct: 244 VSLMFAILYWASPNARHGGFRWVSPGGVLAVVLWLVVSGLFALYVSNFGSYNKTYGAVAG 303
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ V +LGAE +A +
Sbjct: 304 VIIFLVWLWLSNVAILLGAEFDAELERSR 332
>gi|108801303|ref|YP_641500.1| ribonuclease BN, putative [Mycobacterium sp. MCS]
gi|119870454|ref|YP_940406.1| putative ribonuclease BN [Mycobacterium sp. KMS]
gi|126437284|ref|YP_001072975.1| putative ribonuclease BN [Mycobacterium sp. JLS]
gi|108771722|gb|ABG10444.1| ribonuclease BN, putative [Mycobacterium sp. MCS]
gi|119696543|gb|ABL93616.1| putative ribonuclease BN [Mycobacterium sp. KMS]
gi|126237084|gb|ABO00485.1| putative ribonuclease BN [Mycobacterium sp. JLS]
Length = 350
Score = 180 bits (457), Expect = 2e-43, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 114/272 (41%), Gaps = 3/272 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVF 67
F ++ F + +A+ ++ A+LS+FP ++ +L G G + ++D+V
Sbjct: 32 FYVLRKTAREFGHDQCTDLAAALTYYAVLSLFPAVLVMVSLLGVFGQGRRTTDALLDIVS 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I Q++ P+ G I L A + +S V A ++NR Y V E R
Sbjct: 92 DVAPASTVDTLRPTIEQLVESPSAGFALVIGILTALWSASGYVGAFGRAMNRIYEVAEGR 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ R + A + +++F+ + + GR +
Sbjct: 152 PVWKLRPLQLVLTFAALLGAALVAFMLAVSGPVAEALGNAIGLGEAAVTAWSIGRWPVIL 211
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + + ++ P + I G ++W+V +V F Y+ FS+Y+ Y L
Sbjct: 212 LLVVVAVAVLYYATPNVQQPKFRWISLGAGLAILTWIVASVGFGFYVANFSSYNKTYGTL 271
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A ++ L++L++ + + GAEL+A +
Sbjct: 272 AGVIIFLLWLWITNLALLFGAELDAELERGRQ 303
>gi|184200660|ref|YP_001854867.1| hypothetical protein KRH_10140 [Kocuria rhizophila DC2201]
gi|183580890|dbj|BAG29361.1| hypothetical membrane protein [Kocuria rhizophila DC2201]
Length = 400
Score = 179 bits (455), Expect = 3e-43, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 112/270 (41%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
+ A+ F ++ +A+ ++ A+LSVFP ++ +L G G ++D +
Sbjct: 78 VFKRALSEFTKDGCTDLAASLTYFAVLSVFPALLALVSLLGVFGQGEATTKAILDFLNQY 137
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + ++D I Q+ GL + + A + +S A +LNR Y V E R +
Sbjct: 138 APSALVELLSDPISQLTTQSGAGLALVVGIVGALWTASGYTGAFSRALNRIYEVSEGRPF 197
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + + L+ + + + + + + + + +I +L
Sbjct: 198 WKLKPVMLLVTLIVVLIVAAVMVMVLLSGDLAQTLGDAVGLGSTAVTVWNWVKIPVVLLL 257
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + + P + + PG + + +V + F Y+ F+ Y+ Y + S
Sbjct: 258 LVLLIAILFYATPNVQQPKFRWMSPGAAISLVFMIVAGLAFAFYVANFAKYNATYGVIGS 317
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L+ L+++ + GAE++A +
Sbjct: 318 VIILLLGLWIMNNALLFGAEVDAELERGRQ 347
>gi|309812239|ref|ZP_07705997.1| YihY family protein [Dermacoccus sp. Ellin185]
gi|308433926|gb|EFP57800.1| YihY family protein [Dermacoccus sp. Ellin185]
Length = 522
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 104/274 (37%), Gaps = 6/274 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAW 70
A F ++ +A+ ++ ++ ++FP I+ + G G + +VI+ +
Sbjct: 21 FKRAAAKFSQDQCTDLAASLTYYSVQAMFPAIIAAVSTIGLFGNGQKTTDSVIEAIAEIV 80
Query: 71 PEVIAKP---ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ T I + A F + L + + +S V A NR Y V E R
Sbjct: 81 GKNKDDIPEGFTTFINNLQGGGAGLAFILGILVSLWSASGYVNAFSRMSNRIYDVAEGRP 140
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL + ++A V ++ +F V + + ++ ++
Sbjct: 141 VFKLRLWLYFVTIVAFVLAILAAFSLVVSGGIAEQIFDSVGLGTQAATVWDWAKVPFVVV 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSIL--PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + P K + PG + ++ W +G + F Y+ Y Y +
Sbjct: 201 VVIFIISLLFWGTPNVKRPFKQAMFNPGAVLAFVIWAIGTIAFAWYVSNMGNYGKTYGPM 260
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A+ + L++L++ + + GAE ++ + K
Sbjct: 261 ATPIILLLWLWITNLAMLFGAEFDSETLRTRQLK 294
>gi|21219215|ref|NP_624994.1| hypothetical protein SCO0686 [Streptomyces coelicolor A3(2)]
gi|6425606|emb|CAB60467.1| putative membrane protein [Streptomyces coelicolor A3(2)]
Length = 407
Score = 177 bits (450), Expect = 1e-42, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 108/269 (40%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F +++ A+ ++ +L++FP ++ +L G + V+D V
Sbjct: 106 LLRRVFAEFKDDELTDRAAALTYYGILALFPALLVLVSLLG-IAGDSATQEVLDNVKKLA 164
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +T+ + Q+ A G L + + A + +S V A S N Y V E R
Sbjct: 165 PGSARDVLTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPV 224
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + ++ V V+ + + V L + + +L
Sbjct: 225 WKVLPLRVALTVVLLVLAVVSALIVVFTGSLARQAGTALGVGDTALTVWSIAKWPVLVLL 284
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ P A+ K I PG + + W++ + F Y+ F +Y+ Y LA
Sbjct: 285 VTFMIAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLAG 344
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 345 VIIFLVWLWVTNLAILLGLEFDAELARQR 373
>gi|188580068|ref|YP_001923513.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179343566|gb|ACB78978.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 386
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+DI F ++ ++A+ ++ LLS+FP I G + + + +
Sbjct: 92 WWDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLH 151
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVE 124
G PE I +++ ++ A + L S + + ++ ++A+ +LN Y E
Sbjct: 152 GVLPESAIDIIGEQVKRISAKGSGTLGVTFFTSLTLSLWSANAAMKAMFDALNVVYEEEE 211
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+++ + S + A + +++ V +P+ ++ LG+ +I R
Sbjct: 212 KRNFFWLNVRSLTFTGGALLFIILALMSIVVLPVVFNFL-----GLGDGARLIAMARWPV 266
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L GL ++ + P+ +++ + G + + W+ ++LF+ Y+ F Y+ Y
Sbjct: 267 LLLVLLGGLAVLYRYGPSRERARWRWVGAGSVVAGLLWLAASILFSWYVANFGNYNETYG 326
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ + ++++ +LG E+NA + R
Sbjct: 327 SLGAVIGFMTWIWISATIVLLGGEINAEIEHQTAR 361
>gi|332670932|ref|YP_004453940.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
gi|332339970|gb|AEE46553.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
Length = 361
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 107/269 (39%), Gaps = 4/269 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW-- 70
+ F+ ++ A+ ++ A+L++ P ++ ++ G +G + + +
Sbjct: 41 RRTVREFLADECTDQAAALTYYAVLAIAPALLAVVSVLGLVGDPEQTLNRVMDLVADLGA 100
Query: 71 PEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE A+ + + V + A + L A + +S V A +NR Y V E R +
Sbjct: 101 PEDAAQTVEPIVQAVTSNSKAGVALVLGVLLALWSASGYVAAFGRGMNRIYEVDEGRPIW 160
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R + L + V++ V + G + + + ++ +
Sbjct: 161 KLRPVILLVTLALVLIAVLVVVAMVLSGPVARTIGDAVGLSGTAVTVWNVFKWPVVVVLV 220
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ P + I G + W + +V F Y+ TF++Y Y LA +
Sbjct: 221 VVAIAVLYHATPNVRQPKFRWISVGAAVALLVWALASVAFGFYVTTFASYDATYGSLAGV 280
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L++ + + GAEL+A +
Sbjct: 281 VVFLLWLWISNLALLFGAELDAELERGRQ 309
>gi|271961924|ref|YP_003336120.1| ribonuclease BN [Streptosporangium roseum DSM 43021]
gi|270505099|gb|ACZ83377.1| ribonuclease BN [Streptosporangium roseum DSM 43021]
Length = 334
Score = 177 bits (448), Expect = 2e-42, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 109/274 (39%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+D++ ++ F E++ A+ ++ A+LS+FP ++ ++ G G +++D
Sbjct: 38 RSWWDVLKRTVKEFQEDNLTDWAAALTYYAVLSIFPALLAVISVLGLFG-QSATQSLVDN 96
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL--AAAYFSSNGVEALRISLNRAYRVV 123
+ P + I + + + A + +S+ V A + N Y +
Sbjct: 97 LGALAPGPARQTIDTVLQALQSSQRAAGIAAIIGIAVALWSASSYVGAFMRAANVMYEMP 156
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + T + G + + + + S V K L + +
Sbjct: 157 EGRPVWKTLPLRLGITAVLVILMAVGSVAVVFTGGLAEQAGKVLGVGETGLAVWGVVKWP 216
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + + L ++ P + I PG + + W+ + F Y+ F +YS Y
Sbjct: 217 ILVIIVALVLALLYWAAPNVQHPGFRWITPGSMIAVVLWIAASAAFGFYVANFGSYSKTY 276
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A LA ++ L++L++ + +LG E +A +
Sbjct: 277 AALAGVVVFLIWLWITNIAVLLGVEFDAELARER 310
>gi|16264688|ref|NP_437480.1| hypothetical protein SM_b21363 [Sinorhizobium meliloti 1021]
gi|15140826|emb|CAC49340.1| conserved hypothetical membrane protein [Sinorhizobium meliloti
1021]
Length = 364
Score = 176 bits (447), Expect = 3e-42, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 125/277 (45%), Gaps = 10/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ D+ + + E+ +A+ ++ LLSVFP + ++ G + + +
Sbjct: 68 RGLRDVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATL 127
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + +TD++ + + L L A + + NGV AL ++N AY
Sbjct: 128 LAAVLPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDE 187
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS+ L+S G+ L + ++ +P LA++ ++ R
Sbjct: 188 TEKRSFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEG------LLRFVRW 241
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + G+ ++ + P+ + K+ + G + I W+V ++ F++YI F+ Y+
Sbjct: 242 PVMLLLIAAGITLIYRYGPSREPAKLRWLTWGAALSTICWLVASLAFSYYIDNFANYNAT 301
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ ++++++ + I+GAELNA + R
Sbjct: 302 YGALGALIGFMLWIWISTMIVIIGAELNAELEHQTAR 338
>gi|317124596|ref|YP_004098708.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
gi|315588684|gb|ADU47981.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
Length = 355
Score = 176 bits (445), Expect = 4e-42, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 112/275 (40%), Gaps = 3/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVID 64
I + A F ++ +A+ ++ +LS+FP ++ +L G G V +++D
Sbjct: 31 KIWRTSLKRAAHEFGHDECTDLAAGLTYYGVLSIFPGLLALVSLLGVFGRGRSTVESLLD 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ A + I ++ A GL + + A + +S V A ++NR Y V
Sbjct: 91 ILEAVGQGDSADTLRGPITDMVNSGAAGLTLVVGLVGAVWSASGYVGAFGRAMNRIYGVD 150
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + R ++ + + ++ V V G + +
Sbjct: 151 EGRPFIRLRPLNLALTVAFVIMAALILLGLVLTGDLARAVGDTIGLGGAAVTTWSIAKWP 210
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + + ++ P K + + G + ++ +V +V F Y+ FS Y Y
Sbjct: 211 VILILVIAMVALLYWATPNVKQPRFRWLSVGAVIAILAAIVASVGFGFYVSGFSNYDKTY 270
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA ++ L++++++ + + GAE++A M
Sbjct: 271 GSLAGVIVFLLWMWLMNLALLFGAEVDAEMERGRE 305
>gi|254559558|ref|YP_003066653.1| ribonuclease BN [Methylobacterium extorquens DM4]
gi|254266836|emb|CAX22635.1| Ribonuclease BN [Methylobacterium extorquens DM4]
Length = 388
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 123/275 (44%), Gaps = 9/275 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+DI F ++ ++A+ ++ LLS+FP I G + + + +
Sbjct: 94 WWDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLH 153
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVE 124
G PE + I +++ ++ + L S + + ++ ++A+ +LN Y E
Sbjct: 154 GVLPESAIEIIGEQVKRIATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEE 213
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+++ + S + A + +++ V +P+ ++ LG+ +I R
Sbjct: 214 KRNFFWLNVRSLTFTAGALLFIILALISIVVLPVVFNFL-----GLGDGARLIAMARWPM 268
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L GL ++ + P+ +++ + G I + W++ ++LF+ Y+ F Y+ Y
Sbjct: 269 LLLVLLGGLAVLYRYGPSRERARWRWVGAGSIVAGVLWLIASILFSWYVANFGNYNETYG 328
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ + ++++ +LG E+NA + R
Sbjct: 329 SLGAVIGFMTWIWISATIVLLGGEINAEIEHQTAR 363
>gi|218530643|ref|YP_002421459.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|218522946|gb|ACK83531.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 397
Score = 175 bits (444), Expect = 6e-42, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 117/273 (42%), Gaps = 9/273 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E +++ ++ LL++FP I ++ G + + I+ + G
Sbjct: 105 DVLKRTYRDIGENRLTLVSAGVTFFVLLAIFPAIAALVSVYGLIADVSTINHQIEALRGV 164
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L + + ++ GV+ + +LN Y E R
Sbjct: 165 LPSGGVDIVAEQVKRLTEKGDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQR 224
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +V+ VA+P+A+ ++ L + R
Sbjct: 225 GFFKLNLVSLAFTAGALLFVVLALAGIVAVPVAIQFL-----GLSGDAWWLALLRWPILF 279
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 280 VIVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 339
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ +LGA+LNA + +
Sbjct: 340 GAAIGFMTWIWLSTTIVLLGAQLNAELEHQTAK 372
>gi|240139015|ref|YP_002963490.1| Ribonuclease BN family protein [Methylobacterium extorquens AM1]
gi|240008987|gb|ACS40213.1| Ribonuclease BN family protein [Methylobacterium extorquens AM1]
Length = 397
Score = 175 bits (443), Expect = 7e-42, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 117/273 (42%), Gaps = 9/273 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E +++ ++ LL++FP I ++ G + + I+ + G
Sbjct: 105 DVLKRTYRDIGENRLTLVSAGVTFFVLLAIFPAIAALVSVYGLIADVSTINHQIEALRGV 164
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L + + ++ GV+ + +LN Y E R
Sbjct: 165 LPSGGVDIVAEQVKRLTEKGDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQR 224
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +V+ VA+P+A+ ++ L + R
Sbjct: 225 GFFKLNLVSLAFTAGALLFVVLALAGIVAVPVAIQFL-----GLSGDAWWLALLRWPILF 279
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 280 VIVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 339
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ +LGA+LNA + +
Sbjct: 340 GAAIGFMTWIWLSTTIVLLGAQLNAELEHQTAK 372
>gi|119715572|ref|YP_922537.1| putative ribonuclease BN [Nocardioides sp. JS614]
gi|119536233|gb|ABL80850.1| putative ribonuclease BN [Nocardioides sp. JS614]
Length = 377
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 112/273 (41%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ + F ++ +A+ ++ A+L+VFP + +L G +G V T++ +V
Sbjct: 53 WLFVARKTVREFSDDQCTDLAAALTYYAVLAVFPAAIALTSLLGLVGQGTSSVETLLGIV 112
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ K + D ++++ A GL F + A + +S V A ++NR Y + E
Sbjct: 113 DDLGGASVVKSVHDPLIEISRSQAAGLAFVLGLAGALWSASGYVGAFGRAMNRIYEIREG 172
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + R + L+ + V V LL + +
Sbjct: 173 RPVWKLRPLMLLLTLVLVTLAAAVLLALVVTGPVADSVGSALGVGSTLLGVWNIAKWPVI 232
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
LA+ + + ++ P + + G + ++W + ++ F Y+ FS+Y Y
Sbjct: 233 ALAVVVMVALLYYATPNVRQPRFRWVSVGAVLAIVTWALVSLAFGFYVANFSSYDKTYGA 292
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L ++ L+++++ + + GAEL+A +
Sbjct: 293 LGGVIAFLLWVWLTNLALLFGAELDAELERGRE 325
>gi|254561610|ref|YP_003068705.1| ribonuclease BN family protein [Methylobacterium extorquens DM4]
gi|254268888|emb|CAX24849.1| Ribonuclease BN family protein [Methylobacterium extorquens DM4]
Length = 397
Score = 175 bits (443), Expect = 8e-42, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 117/273 (42%), Gaps = 9/273 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E +++ ++ LL++FP I ++ G + + I+ + G
Sbjct: 105 DVLKRTYRDIGENRLTLVSAGVTFFVLLAIFPAIAALVSVYGLIADVSTINHQIEALRGV 164
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L + + ++ GV+ + +LN Y E R
Sbjct: 165 LPSGGVDIVAEQVKRLTEKGDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQR 224
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +V+ VA+P+A+ ++ L + R
Sbjct: 225 GFFKLNLVSLAFTAGALLFVVLALAGIVAVPVAIQFL-----GLSGDAWWLALLRWPILF 279
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 280 VIVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 339
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ +LGA+LNA + +
Sbjct: 340 GAAIGFMTWIWLSTTIVLLGAQLNAELEHQTAK 372
>gi|256789758|ref|ZP_05528189.1| hypothetical protein SlivT_35203 [Streptomyces lividans TK24]
Length = 402
Score = 175 bits (443), Expect = 9e-42, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 108/269 (40%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F +++ A+ ++ +L++FP ++ +L G + V+D V
Sbjct: 101 LLRRVFAEFKDDELTDRAAALTYYGILALFPALLVLVSLLG-IAGDSATQEVLDNVKKLA 159
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +T+ + Q+ A G L + + A + +S V A S N Y V E R
Sbjct: 160 PGSARDVLTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPV 219
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + ++ V V+ + + V L + + +L
Sbjct: 220 WKVLPLRVALTVVLLVLAVVSALIVVFTGSLARQAGTALGVGDTALTVWSIAKWPVLVLL 279
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ P A+ K I PG + + W++ + F Y+ F +Y+ Y LA
Sbjct: 280 VTFMIAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLAG 339
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 340 VIIFLVWLWVTNLAILLGLEFDAELARQR 368
>gi|163851892|ref|YP_001639935.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|163663497|gb|ABY30864.1| ribonuclease BN [Methylobacterium extorquens PA1]
Length = 397
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 117/273 (42%), Gaps = 9/273 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ E +++ ++ LL++FP I ++ G + + I+ + G
Sbjct: 105 DVLKRTYRDIGENRLTLVSAGVTFFVLLAIFPAIAALVSVYGLIADVSTINHQIEALRGV 164
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L + + ++ GV+ + +LN Y E R
Sbjct: 165 LPSGGVDIVAEQVKRLTEKGDTTLGLTALIGIALSVWSANGGVKHVFDALNLVYNEREQR 224
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +V+ VA+P+A+ ++ L + R
Sbjct: 225 GFFKLNLVSLAFTAGALLFVVLALAGIVAVPVAIQFL-----GLSGDAWWLALLRWPILF 279
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 280 VIVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 339
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ +LGA+LNA + +
Sbjct: 340 GAAIGFMTWIWLSTTIVLLGAQLNAELEHQTAK 372
>gi|224476940|ref|YP_002634546.1| hypothetical protein Sca_1456 [Staphylococcus carnosus subsp.
carnosus TM300]
gi|222421547|emb|CAL28361.1| hypothetical protein SCA_1456 [Staphylococcus carnosus subsp.
carnosus TM300]
Length = 358
Score = 174 bits (442), Expect = 9e-42, Method: Composition-based stats.
Identities = 54/271 (19%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ I ++D +A+ +S +LS+F + ++ +++++
Sbjct: 68 NLLSYLIYRIGKDDASGLAAQLSYYFMLSLF--PMLLFLMSLLPLFKIDRDKIVNMIANN 125
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A +T I ++ + + ++ + A + +SNG+ AL + N AY V + R+
Sbjct: 126 APASTADLLTGIIGDIMKNASGSILSVGLILALWSASNGMTALMNAFNVAYDVEDGRNPI 185
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +LIS + ++ + V + + I + +
Sbjct: 186 VLKLISVLFTVIMGAVFIAAMIFPVFGQQIGHLLFGPLGLDSQIKWIFNILSYALPFVVI 245
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ + ++ P K K+ S++PG +F + W++G F Y+ F+ YS Y + I+
Sbjct: 246 FLLFVTLYTLAPNIKIKMKSVIPGALFASVVWILGTAAFGLYVSNFANYSKTYGSIGGII 305
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++LY+ G I+GAE+NA + K
Sbjct: 306 VLMLWLYITGFIIIVGAEINAIINQRRTLKN 336
>gi|148271712|ref|YP_001221273.1| putative tRNA processing ribonuclease BN [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
gi|147829642|emb|CAN00558.1| putative tRNA processing ribonuclease BN [Clavibacter michiganensis
subsp. michiganensis NCPPB 382]
Length = 363
Score = 174 bits (441), Expect = 1e-41, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 113/270 (41%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ + F + +A+ ++ A+LS+FP ++ +L G G Q V V+D++ G
Sbjct: 36 VLRKTVREFGSDQCTDIAASLTYYAVLSLFPALIAIISLLGVFGQGQQTVTAVLDLLRGF 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + + PA G + A + +S V A ++NR Y + E R +
Sbjct: 96 APADALALIEPILTGFVESPAAGFALVSGIVLAIWSASGYVGAFTRAMNRIYEIPEGRPF 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + L+ V L++ + + + + + ++ + A
Sbjct: 156 LKLKPMQLAVTLIGIVILLVCALIIAISGPVTDAIGEALGLGPTVQIVWSIAKWPVLAFA 215
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P AK + G + VV +V F Y+ FS+Y+ Y LA
Sbjct: 216 IVLLIAILYYATPNAKQPKFRWMSVGAAIALVVLVVASVGFAFYVTEFSSYAKSYGALAG 275
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++ + + GAE +A +
Sbjct: 276 VVVFLLWLWIANLALLFGAEFDAELERGRQ 305
>gi|167620300|ref|ZP_02388931.1| YihY family protein [Burkholderia thailandensis Bt4]
Length = 636
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 93/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLLTAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + GA + +++
Sbjct: 244 AFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|289773646|ref|ZP_06533024.1| ribonuclease BN family membrane protein [Streptomyces lividans
TK24]
gi|289703845|gb|EFD71274.1| ribonuclease BN family membrane protein [Streptomyces lividans
TK24]
Length = 394
Score = 174 bits (440), Expect = 2e-41, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 108/269 (40%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F +++ A+ ++ +L++FP ++ +L G + V+D V
Sbjct: 93 LLRRVFAEFKDDELTDRAAALTYYGILALFPALLVLVSLLG-IAGDSATQEVLDNVKKLA 151
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +T+ + Q+ A G L + + A + +S V A S N Y V E R
Sbjct: 152 PGSARDVLTNAVEQLQAKAGLGSVLAVVGLVGAVWSASGYVAAFIRSANAVYDVPEGRPV 211
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + ++ V V+ + + V L + + +L
Sbjct: 212 WKVLPLRVALTVVLLVLAVVSALIVVFTGSLARQAGTALGVGDTALTVWSIAKWPVLVLL 271
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ P A+ K I PG + + W++ + F Y+ F +Y+ Y LA
Sbjct: 272 VTFMIAILYWAAPNARVKGFKWISPGSLVALLIWLLASAGFAFYVANFGSYNKTYGTLAG 331
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A +
Sbjct: 332 VIIFLVWLWVTNLAILLGLEFDAELARQR 360
>gi|300786173|ref|YP_003766464.1| ribonuclease [Amycolatopsis mediterranei U32]
gi|299795687|gb|ADJ46062.1| putative ribonuclease [Amycolatopsis mediterranei U32]
Length = 337
Score = 172 bits (437), Expect = 4e-41, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 105/268 (39%), Gaps = 4/268 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F ++ A+ ++ LS+FP I+ + G LG + TVID V P
Sbjct: 34 LKRTFKQFNRDNLTDWAAALTYYGALSLFPGIIVLTAILGLLG-PDKIQTVIDNVNQLVP 92
Query: 72 EVIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I ++ + L + L A + +S + A + N Y + E R Y
Sbjct: 93 GQGKDILVGAIKELTGSRSLAGPLAILGLLGALWSASGYIGAFMRASNAIYGMPEGRPIY 152
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + V L + + VA + +L+ + L +
Sbjct: 153 KVVPLRVALTIAIVVLLALCALGVVATGSVARRLGDLIGLGSTGVLVWEIAKWPVIALLV 212
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ P + + PG + + WV+ + F Y+ F +Y+ Y LA +
Sbjct: 213 SVAFALLYWVGPNVRQPGFRWLTPGGLLAVVLWVLASAGFALYVANFGSYNKTYGSLAGV 272
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ LV+L++ + +LGAEL+A +
Sbjct: 273 IAFLVWLWISNLAILLGAELDAELARGR 300
>gi|170780894|ref|YP_001709226.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169155462|emb|CAQ00570.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 363
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 112/270 (41%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
++ + F + +A+ ++ A+LS+FP ++ +L G G V V+D++ G
Sbjct: 36 VLRKTMREFGTDQCTDIAASLTYYAVLSLFPALIAIISLLGVFGQGESTVSAVLDLLRGF 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + + PA G + A + +S V A ++NR Y + E R +
Sbjct: 96 APADALALIEPILTGFVESPAAGFALVSGIVLAIWSASGYVGAFSRAMNRIYEIPEGRPF 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + ++ V L++ + + + + + ++ + A
Sbjct: 156 WKLKPTQLAVTVIGIVLLLVCALIIAISGPVTDAIGEALGLGQTVQIVWSIAKWPVLAFA 215
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ P AK + G + V+ +V F Y+ FS+Y+ Y LA
Sbjct: 216 IVLLIAILYYATPNAKQPKFRWMSMGAAIALVVLVIASVAFAFYVTEFSSYAKSYGALAG 275
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++ + + GAE +A +
Sbjct: 276 VVVFLLWLWIANLALLFGAEFDAELERGRQ 305
>gi|311893944|dbj|BAJ26352.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 358
Score = 172 bits (436), Expect = 5e-41, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 107/271 (39%), Gaps = 4/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ F++++ A+ ++ +L+VFP ++ ++ G LG V+D +
Sbjct: 49 LAVLRRTAGEFLDDELPDRAAALTYYGVLAVFPALLVLVSILGLLGGP-VTGAVLDNLRQ 107
Query: 69 AWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P ++ + Q+ G + L A + +S V A + N Y + E R
Sbjct: 108 LAPGPARDVLSGSVEQLRDGRGAGGVFAAVGLLGALWSASGYVAAFIRAANAVYDIREGR 167
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + G L+ V L+ + + V + + + +
Sbjct: 168 PVWKLTPLRVGLTLVLMVLLLASAVIVVFTGPLAERAGDLLGIGPTAVTVWSVAKWPVLV 227
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + + ++ P + + I PG + + W+ + F Y+ F +Y+ Y L
Sbjct: 228 LLVSVMIALLYWAAPNVRGRGWHWISPGSLLAVLLWLALSGGFAAYVAWFGSYNRTYGTL 287
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A ++ LV+L++ + +LG E +A +
Sbjct: 288 AGVVVFLVWLWLSNLAVLLGLEFDAELARER 318
>gi|188581649|ref|YP_001925094.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179345147|gb|ACB80559.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 396
Score = 172 bits (435), Expect = 7e-41, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 119/273 (43%), Gaps = 9/273 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ E +++ ++ LL++FP + ++ G + + I+ + G
Sbjct: 104 DILKRTYRDIGENRLTLVSAGVTFFVLLAIFPAVAALVSVYGLVADVATINQQIESLRGI 163
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ ++ L + + ++ GV+ + +LN Y E R
Sbjct: 164 LPSGGVDILAEQVKRLTEKGDTTLGLTALFGIALSVWSANGGVKHVFDALNLVYNEREQR 223
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L+S + A + +VI VA+P+A+ ++ L + + R A
Sbjct: 224 GFFKLNLVSLAFTAGALLFIVIALAGIVAVPVAIQFL-----GLSSDAWWLALLRWPALF 278
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ + P+ + + PG +F W+ G++LF+ Y+ F +Y Y L
Sbjct: 279 VVVILMLAVLYRYGPSRDAPRWRWVTPGGMFAAFLWLAGSLLFSWYVSNFGSYDKTYGSL 338
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ +LGA+LNA + +
Sbjct: 339 GAAIGFMTWIWLSTTIVLLGAQLNAELEHQTAK 371
>gi|308177256|ref|YP_003916662.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
gi|307744719|emb|CBT75691.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
Length = 376
Score = 171 bits (434), Expect = 8e-41, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 105/267 (39%), Gaps = 3/267 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPE 72
+I F + +A+ ++ A+LS+FP ++ +L G G ++ ++ +
Sbjct: 50 RSIREFSRKKCTDLAASLTYFAMLSIFPALLAVVSLLGVAGQAENMTRNILSLIQELASK 109
Query: 73 VIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + I Q+ + P+ GL L A + +S V A ++N+ Y V E R +Y
Sbjct: 110 EVVETLRQPIEQLASAPSAGLALVAGLLGALWSASGYVGAFGRAMNQIYEVYEGRPFYKL 169
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R + L+ V + ++ + + + + + I + +L +
Sbjct: 170 RPLMLALTLVLLVAVSVLGMLLIVSGPLAQAIGNVLGLGESAVAIWNIAKWPVIVLCAIV 229
Query: 192 GLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ P K + G + V V F Y+ F Y+ Y + ++
Sbjct: 230 LVAVLYYGAPNVKQPKFRWVSLGSAIALLVLAVATVGFFFYVSNFGNYNKTYGAIGGVIV 289
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
L++L++ + + GA +A
Sbjct: 290 LLLWLWIANLSLLFGAVFDAEAERGRQ 316
>gi|256824738|ref|YP_003148698.1| hypothetical protein Ksed_08810 [Kytococcus sedentarius DSM 20547]
gi|256688131|gb|ACV05933.1| predicted membrane protein [Kytococcus sedentarius DSM 20547]
Length = 417
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 104/275 (37%), Gaps = 5/275 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A+ F ++ +A+ ++ A+LS+FP I+ +L G G + +
Sbjct: 92 VARRALYEFTDDGCTDLAAGLTYFAVLSIFPAIIGLVSLLGVFGQGESTTQAFLQIAVDL 151
Query: 71 PEVIAKPITDEILQVLAVPAKG-----LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
I + + + L A + +SN V +NR Y V E
Sbjct: 152 GADPQSTGYTFIEDFITKQQESSGAGLALALGLLGALWSASNYVNGFSRMMNRIYEVPEG 211
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +++ R + +L + + ++ FV V I + A
Sbjct: 212 RPFWVLRPVMVLVTVLVLLLVAVLGLSFVLTGPVAESVFGVVGLGDLATTIWAWAKWPAA 271
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ P K + PG I ++ WV+ + F YI F Y Y +
Sbjct: 272 ALIVIFIIRLLYWATPNVKLPRQILTPGAILAFLIWVLASAAFGFYIANFGNYDATYGSM 331
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A ++ L++L++ +LGAE++A K+
Sbjct: 332 AGVIVFLLWLWLTNTVLLLGAEIDAEAERMRELKR 366
>gi|288962283|ref|YP_003452578.1| ribonuclease BN [Azospirillum sp. B510]
gi|288914549|dbj|BAI76034.1| ribonuclease BN [Azospirillum sp. B510]
Length = 353
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 120/273 (43%), Gaps = 7/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ + ++ +A+ +S ALL++FP + ++ G + + T + + G
Sbjct: 54 DILLRVWDEQSGDNVSMLAAGVSYYALLAIFPAVAALVSIFGLVADPAMIETQLSQLRGL 113
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P ++D+ +V P++GL L + +S G +L +LN AY E R
Sbjct: 114 LPPEALTIVSDQARKVATAPSQGLGFGLIFGLLLTLWSASRGTNSLVTALNIAYGEKETR 173
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + +S G + + +++ + +A+P A+A V I R
Sbjct: 174 GFLMLAALSMGLTVAGLLFVIVAMALIIAVPAAIAIVGLQ---DTPAGWIANLARWPILA 230
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ + L + + P + + + G + W++G++ F+ Y+ F +Y+ Y +
Sbjct: 231 AAIMLALAVFYRYAPDRREPRWRWVTWGSAMATMVWLLGSLGFSVYVSNFGSYNETYGSV 290
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ L++ + +LGAELNA + R
Sbjct: 291 GAVVILLLWFNLTSYVVLLGAELNAEIEHQTAR 323
>gi|284043536|ref|YP_003393876.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283947757|gb|ADB50501.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 328
Score = 171 bits (433), Expect = 1e-40, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 104/274 (37%), Gaps = 4/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F + + + E++ A+ ++ LLS+FP ++ ++ G G Q + +
Sbjct: 29 LFATLKRTVREYSEDNMSDWAAALTYYGLLSLFPALIALVSILGLFGDPQSTTRSLTDIV 88
Query: 68 GAW-PEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P A I + + A LF + AA + +S V A + N Y E
Sbjct: 89 TRLGPSSAADTFEGPIRSITSNRGAAGVLFFVGLGAAIWSASGYVGAFTRAANIVYETPE 148
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ R + L V L +++ V + V + + +
Sbjct: 149 GRPFWKLRPLQLLVTLAMVVMLALVALALVMTGPVVETVADSIGIGSTAVTVWEFAKWPV 208
Query: 185 TMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + ++ P K + PG + + W++ + LF Y+ F +Y Y
Sbjct: 209 MLAVVVLMFAVLYHVSPNVKLPGFRWVTPGALLAIVVWLIASALFAFYVANFGSYDKTYG 268
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L I+ LV+ ++ V +LG ELN+
Sbjct: 269 TLGGIVVLLVWFWITNVALLLGMELNSERERSRE 302
>gi|77460571|ref|YP_350078.1| ribonuclease BN [Pseudomonas fluorescens Pf0-1]
gi|77384574|gb|ABA76087.1| putative ribonuclease [Pseudomonas fluorescens Pf0-1]
Length = 316
Score = 170 bits (432), Expect = 2e-40, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 125/273 (45%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ I FV+++ AS ++ L S+FPFI+F L GFL F +
Sbjct: 11 LHRVMVRTITEFVDDEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A Y +S GV + ++N AY VVE R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALYTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L++ + + V P + ++ ++ + R ++
Sbjct: 130 LWKRFPLSVIYTVGIAGMLLVAAALMVLGPQVMGWIAAQVGLEEVIVTLWTIARWPVIVI 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ +P K + I PG + + W++ ++ F Y+ TF+ Y+ MY + +
Sbjct: 190 LMMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIIASLGFAFYVKTFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISSAVLLLGAEMNAVIEHMSSEGK 282
>gi|284991775|ref|YP_003410329.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284065020|gb|ADB75958.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 374
Score = 170 bits (431), Expect = 2e-40, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 114/271 (42%), Gaps = 8/271 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I+ A ++ + ++ L++FP ++ N+ G + + + V ++
Sbjct: 66 WRGWKQIVQRAWAENNADNMPIIGGGVAFFGFLAIFPALIAMMNIYGLVASPETVARQVE 125
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYR 121
+ PE A I D++ ++ L S L A + +S GV L ++N AY
Sbjct: 126 DLSAQLPESAADLIGDQLNAIVTNSGGALSFGLAASVLGALWSASGGVGNLVTAVNLAYD 185
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
VE R + + IS G L A V ++I + +P L + P ++ R
Sbjct: 186 EVETRGFVKRKAISLGLTLGAIVFVLITFTLVAVVPNVLDAL----PLGPFATVLAQVVR 241
Query: 182 IYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L ++ P + + + G I + W V ++ F+ Y+ F +Y
Sbjct: 242 WVVLLGIFAGSLAVLYRVAPDRDAPQLRWVSLGAIVVTVIWAVVSLGFSIYVDNFGSYDK 301
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y +A ++ +++LY+ +LGAE+N+
Sbjct: 302 TYGAIAGVIVLMLWLYLTCYLILLGAEINSE 332
>gi|162456942|ref|YP_001619309.1| hypothetical protein sce8659 [Sorangium cellulosum 'So ce 56']
gi|161167524|emb|CAN98829.1| hypothetical protein sce8659 [Sorangium cellulosum 'So ce 56']
Length = 337
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 65/280 (23%), Positives = 131/280 (46%), Gaps = 7/280 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ D + D + +++ +A+ ++ +L++FPF++F LAG +
Sbjct: 3 LPGREIPWKDFLNDIKQECIKDKIDTIAASLAFFGVLAIFPFLLFAVALAGLVIDPAESA 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ ++ P +A + + + + + L T+ AL A + +S GV AL +LN AY
Sbjct: 63 QLMSELYQVAPPAVANILGERLQALTGGQSPALLTVGALGAVWAASGGVTALMDALNSAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS+ R I+ L +V L I S + VA P A++ ++
Sbjct: 123 GVEDKRSYLKRRGIALLVTLGGAVLLTIASALAVATPALAAHLG-------PFATLVLWL 175
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R+ + L + + L ++ LP + + I PG + + WV+ ++ F+ Y+ F +Y
Sbjct: 176 RMPVSALIVMVVLATLYYLLPDVEQQFKFITPGSVVAVVIWVLASLGFSFYVSRFGSYEV 235
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y L ++ L+++++ + +LGAE+NA + K
Sbjct: 236 SYGALGGVIILLLWMWISSLAVLLGAEINAIIEHRSPEGK 275
>gi|218528864|ref|YP_002419680.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|218521167|gb|ACK81752.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 388
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 124/275 (45%), Gaps = 9/275 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+DI F ++ ++A+ ++ LLS+FP I G + + + +
Sbjct: 94 WWDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLH 153
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVE 124
G PE + I +++ ++ + L S + + ++ ++A+ +LN Y E
Sbjct: 154 GVLPESAIEIIGEQVKRIATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEE 213
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+++ + S + A + +++ V +P+ ++ LG+ +I GR
Sbjct: 214 KRNFFWLNVRSLTFTAGALLFIILALISIVVLPVVFNFL-----GLGDGARLIAMGRWPV 268
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L GL ++ + P+ +++ + G + + W++ ++LF+ Y+ F Y+ Y
Sbjct: 269 LLLVLLGGLAVLYRYGPSRERARWRWVGAGSVVAGVLWLIASILFSWYVANFGNYNETYG 328
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ + ++++ +LG E+NA + R
Sbjct: 329 SLGAVIGFMTWIWISATIVLLGGEINAEIEHQTAR 363
>gi|15597947|ref|NP_251441.1| hypothetical protein PA2751 [Pseudomonas aeruginosa PAO1]
gi|107102287|ref|ZP_01366205.1| hypothetical protein PaerPA_01003345 [Pseudomonas aeruginosa PACS2]
gi|116050744|ref|YP_790435.1| hypothetical protein PA14_28530 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218891066|ref|YP_002439932.1| hypothetical protein PLES_23291 [Pseudomonas aeruginosa LESB58]
gi|254241206|ref|ZP_04934528.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296388780|ref|ZP_06878255.1| hypothetical protein PaerPAb_11543 [Pseudomonas aeruginosa PAb1]
gi|313107873|ref|ZP_07794045.1| putative membrane protein [Pseudomonas aeruginosa 39016]
gi|9948830|gb|AAG06139.1|AE004703_5 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115585965|gb|ABJ11980.1| putative membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126194584|gb|EAZ58647.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|218771291|emb|CAW27056.1| putative membrane protein [Pseudomonas aeruginosa LESB58]
gi|310880547|gb|EFQ39141.1| putative membrane protein [Pseudomonas aeruginosa 39016]
Length = 299
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 126/273 (46%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++ + F+E+D AS ++ L S+FPF++ L G+L +F + +
Sbjct: 11 LFGLVKRTVNEFLEDDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I Q+ GL +I A + SS G+ ++ I+LN AY V E R
Sbjct: 71 LLLPPEAMDQVNPVIDQLQ-QQKGGLLSIGIAVALWTSSAGIRSMMIALNAAYDVKESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y L ++ L++ + + V P +A++ L+ + R +
Sbjct: 130 VWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIAGLVGLEQYLVTLWTWLRWPLAVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + + +P + + I PG + + I+W+ ++ + Y+ F+ Y+ MY + +
Sbjct: 190 LLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIAASLAYGFYVKNFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ + GAELNA + + K
Sbjct: 250 IIILLLYFYLSAAVVLFGAELNAVIEHHSEDGK 282
>gi|70731937|ref|YP_261679.1| ribonuclease BN [Pseudomonas fluorescens Pf-5]
gi|68346236|gb|AAY93842.1| ribonuclease BN, putative [Pseudomonas fluorescens Pf-5]
Length = 316
Score = 169 bits (429), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 125/273 (45%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ + F+ ++ AS ++ L S+FPFI+F L GFL F +
Sbjct: 11 LHRVLIRTVNEFIADEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFTWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R
Sbjct: 71 LVLPHEALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P +A++ ++ + R +L
Sbjct: 130 IWKRFPLSVFYTVGIAGMLLAAAALMVLGPQVMAWLAGQVGLEDFIVTLWTILRWPVIVL 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ +P + K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LMMVAVALMYYVMPDVQQKFRFITPGSVLAVVVWIVASLGFAYYVKTFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|296114390|ref|ZP_06833044.1| ribonuclease BN [Gluconacetobacter hansenii ATCC 23769]
gi|295979151|gb|EFG85875.1| ribonuclease BN [Gluconacetobacter hansenii ATCC 23769]
Length = 397
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 61/277 (22%), Positives = 118/277 (42%), Gaps = 7/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ + + A+ + A LS+FP + ++ G L Q V + V
Sbjct: 82 RHILPVMKQVATNIASDQITLAAAGCAFYATLSLFPAMSTMISIYGLLFDPQTVEPQLVV 141
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRV 122
+ P I D I ++A L + A + +S +L +++N AY
Sbjct: 142 LRNLLPPAAYDLICDRIHVLVAQSHSSLTLNLIVSTTIAMWSASAATRSLLLAMNVAYNT 201
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA---LGNLLLIIWN 179
E RS+ + + L A ++ + VA+P+ L Y+ + G+L L++
Sbjct: 202 PETRSFLRFQAMGMIMTLCAICGGILTLALMVALPILLDYLPQKLSLAPPPGSLELLVRM 261
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G +L + G ++ F P +S ILPG + + W++ + F++Y+ + Y
Sbjct: 262 GGPALMLLFVLSGCSLLYRFGPNRRSPSWRCILPGSVAATLLWLLTSFGFSYYVSHIAGY 321
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L + + +++ Y+ +LGAELNA + I
Sbjct: 322 GATYGPLGAFVATMMWFYVSAYVVLLGAELNAGLEIQ 358
>gi|152983785|ref|YP_001347855.1| hypothetical protein PSPA7_2488 [Pseudomonas aeruginosa PA7]
gi|150958943|gb|ABR80968.1| membrane protein, putative [Pseudomonas aeruginosa PA7]
Length = 299
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 126/273 (46%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++ + F+E+D AS ++ L S+FPF++ L G+L +F + +
Sbjct: 11 LFGLVKRTVNEFLEDDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I Q+ GL +I A + SS G+ ++ I+LN AY V E R
Sbjct: 71 LLLPPEAMDQVNPVIDQLQ-QQKGGLLSIGIAVALWTSSAGIRSMMIALNAAYDVKESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y L ++ L++ + + V P +A++ L+ + R +
Sbjct: 130 VWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIASLVGLEQYLVTLWTWLRWPLAVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + + +P + + I PG + + I+W+ ++ + Y+ F+ Y+ MY + +
Sbjct: 190 LLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIGASLAYGFYVKNFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ + GAELNA + + K
Sbjct: 250 IIILLLYFYLSAAVVLFGAELNAVIEHHSKDGK 282
>gi|163850307|ref|YP_001638350.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|240137378|ref|YP_002961849.1| Ribonuclease BN [Methylobacterium extorquens AM1]
gi|163661912|gb|ABY29279.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|240007346|gb|ACS38572.1| Ribonuclease BN [Methylobacterium extorquens AM1]
Length = 388
Score = 169 bits (428), Expect = 4e-40, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 123/275 (44%), Gaps = 9/275 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+DI F ++ ++A+ ++ LLS+FP I G + + + +
Sbjct: 94 WWDIATRVYLEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLSTLH 153
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVE 124
G PE + I +++ ++ + L S + + ++ ++A+ +LN Y E
Sbjct: 154 GVLPESAIEIIGEQVKRIATKGSGALGFTFFTSLTLSLWSANAAMKAMFDALNVVYEEEE 213
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+++ + S + A + +++ V +P+ ++ LG+ +I R
Sbjct: 214 KRNFFWLNVRSLTFTAGALLFIILALISIVVLPVVFNFL-----GLGDGARLIAMARWPV 268
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L GL ++ + P+ +++ + G + + W++ ++LF+ Y+ F Y+ Y
Sbjct: 269 LLLVLLGGLAVLYRYGPSRERARWRWVGAGSVVAGVLWLIASILFSWYVANFGNYNETYG 328
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ + ++++ +LG E+NA + R
Sbjct: 329 SLGAVIGFMTWIWISATIVLLGGEINAEIEHQTAR 363
>gi|315303543|ref|ZP_07874107.1| transporter [Listeria ivanovii FSL F6-596]
gi|313628085|gb|EFR96654.1| transporter [Listeria ivanovii FSL F6-596]
Length = 289
Score = 169 bits (427), Expect = 6e-40, Method: Composition-based stats.
Identities = 66/273 (24%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F + + D A+ ++ L S+FP ++ A L ++ + +V +++
Sbjct: 14 IFQVGQTVTGRVGQNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYMHIDK--DSVFNMLK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + + + +L GL +I +A + +SNG+ A+ SLN+AY V R+
Sbjct: 72 EFAPEQILDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVMQRLLSMLFTLAMLATVGATLLLIVFGQQIGLFLINHLNFSEDFLDFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG IF+ + W + +V F +Y+ F+ YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGAIFSTVGWTIASVGFAYYVNNFANYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +++
Sbjct: 252 IIILMLWFYLTGIILMVGGELNATLAIRKKKRQ 284
>gi|70726074|ref|YP_252988.1| hypothetical protein SH1073 [Staphylococcus haemolyticus JCSC1435]
gi|68446798|dbj|BAE04382.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 403
Score = 168 bits (426), Expect = 7e-40, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP L L + I +
Sbjct: 66 NFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPM---LIFLLTLLPLFNLDQSQITGLLSN 122
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I V + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 123 APADTSSLIKGVISDVTKNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDNRNGI 182
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +++S + ++ V ++ + + ++ + I R+ ++ +
Sbjct: 183 LLKILSVIFTIVLGVVFLVAMALPTMGSVIAHFLFGPLGLDSQVKWIFSLIRVVLPLIII 242
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ P K+K+ S+LPG IFT + W++G+ F YI F YS Y +A I+
Sbjct: 243 LILFTILYSVAPNVKTKLKSVLPGAIFTSVIWLLGSFAFGFYISNFGNYSKTYGSIAGII 302
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L++LY+ I+GAE+NA + +
Sbjct: 303 ILLIWLYLTSFIIIIGAEINAIIHQRH 329
>gi|284993043|ref|YP_003411597.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284066288|gb|ADB77226.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 347
Score = 168 bits (425), Expect = 9e-40, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 103/272 (37%), Gaps = 6/272 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F E++ A+ ++ L++FP ++ ++ G L + D + P
Sbjct: 56 LKRTLTEFSEDNLTDWAAALTYYGTLALFPALIALVSIVGLLTNP---QQLTDALTAVVP 112
Query: 72 EVIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + I Q+ A I AA + +S V A + N Y E R +
Sbjct: 113 AQAADTLNPVIEQLAGNTAPVGIGLVIGLAAAIWSASGYVGAFTRAANVVYETPEGRKVW 172
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + L+ + ++ + V + V ++ + + ++ +
Sbjct: 173 KLKPLQLLVTLIGVLFAALIVAMLVLSGGVVDAVAGAIGLPDAVVTVWSYAKWPVVVVLV 232
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ P K + PG + W + LF Y+ FS Y+ Y LA +
Sbjct: 233 ALMIAVLYYSTPNVKLRGFRFTSPGAAVALLVWAAASALFAFYVANFSNYNATYGALAGV 292
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ LV+ ++ + + G EL+A + K+
Sbjct: 293 IVFLVWFWITNLALLFGIELDAEIERTKELKE 324
>gi|332977963|gb|EGK14707.1| ribonuclease BN [Psychrobacter sp. 1501(2011)]
Length = 523
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 109/275 (39%), Gaps = 6/275 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVID 64
F+ + I +F+E+D A+ ++ + LLS+ P + + + A + D
Sbjct: 13 KTWFNFLRFLIRNFIEDDSQQKAASLTYTTLLSIVPILTVLLMILSSIPALESVREQISD 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+++ ++ + A + L I A+A S + + + N+ +RV +
Sbjct: 73 LIYSNLLPQSGLQVSQYLNDF-AEKSSNLTAIGAMALFVTSIMTLTTIERAFNQIWRVED 131
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ L + + L + L V + ++ + I
Sbjct: 132 RSGGVKSILRYWTIITLGPLVLGTAFIVSSTVQSLSFLNQQIGGYGIDWNFWIQ----LV 187
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ G I ++ F+P AK + + +F +++ + F + F++Y +Y
Sbjct: 188 SFAITIAGFIGMYWFIPKAKVPLKNAAIAGVFVAVTFELLKYSFGIVMTNFTSYEAIYGA 247
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A++ L+++Y+ +LG E++ ++ I+ ++
Sbjct: 248 FAALPIFLLWIYLSWNIILLGVEISYTLTIFATKE 282
>gi|313632903|gb|EFR99846.1| transport protein [Listeria seeligeri FSL N1-067]
gi|313637503|gb|EFS02939.1| transport protein [Listeria seeligeri FSL S4-171]
Length = 289
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F + + D A+ ++ L S+FP ++ A L ++ + +V +++
Sbjct: 14 IFQVGQTVTGRVGQNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYMHIDK--DSVFNMLK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + + + +L GL +I +A + +SNG+ A+ +LN+AY V R+
Sbjct: 72 EFAPEQILDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKALNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVVQRLLSMLFTLAMLATVGATLLLIVFGQQIGLFLINHLNFSEDFLSFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG IF+ I W V +V F +Y+ F+ YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGAIFSTIGWTVASVGFAYYVNNFANYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 252 IIILMLWFYLTGIILMVGGELNATLAIRKKKKQ 284
>gi|115374664|ref|ZP_01461942.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310820812|ref|YP_003953170.1| ribonuclease bn [Stigmatella aurantiaca DW4/3-1]
gi|115368332|gb|EAU67289.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309393884|gb|ADO71343.1| Ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
Length = 352
Score = 168 bits (425), Expect = 1e-39, Method: Composition-based stats.
Identities = 55/271 (20%), Positives = 120/271 (44%), Gaps = 6/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + + +A ++ SA+L++FPF++F +LA + +I +
Sbjct: 12 EFFKSLKDEYTRDKVGDVAGALTFSAILAIFPFLLFLVSLASVIIDPAQAEQLIQELARV 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + D + + A GL T+ + A + +S G+ AL +LN AY V E R ++
Sbjct: 72 APKEVVTILGDRLHALAASNNVGLLTLGGVGAVWAASGGMVALMTALNTAYGVEESRPFW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R ++ L+ + ++ + V P V FP ++ R+ + +
Sbjct: 132 KVRGVALLVTLVTAAISILAAAAAVVTPALAEKVGGPFP------TLVTWLRLPVAGVMM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ LP + + I PG + + W++ + F+ Y+ F +Y Y + ++
Sbjct: 186 MFVWALLYYALPDVQQRFRFITPGSVAGVLIWLLASWGFSQYVANFGSYDANYGAIGGVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ ++GAE+NA + K
Sbjct: 246 VLLMWMWISSQVILVGAEINAILEHRSPEGK 276
>gi|313608345|gb|EFR84318.1| transport protein [Listeria monocytogenes FSL F2-208]
Length = 289
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 130/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
+ D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGKNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|49086024|gb|AAT51322.1| PA2751 [synthetic construct]
Length = 300
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/273 (23%), Positives = 124/273 (45%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F ++ + F+E D AS ++ L S+FPF++ L G+L +F + +
Sbjct: 11 LFGLVKRTVNEFLEGDMPTYASALAYQMLFSLFPFLLVLITLVGYLHLPEFFAWLREQAA 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I Q+ GL I A + SS G+ ++ I+LN AY V E R
Sbjct: 71 LLLPPEAMDQVNPVIDQLQ-QQKGGLLPIGIAVALWTSSAGIRSMMIALNAAYDVKESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y L ++ L++ + + V P +A++ L+ + R +
Sbjct: 130 VWKRFSLSILYTLGIALLLLVAAGLMVTGPQVIAWIAGLVGLEQYLVTLWTWLRWPLAVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + + +P + + I PG + + I+W+ ++ + Y+ F+ Y+ MY + +
Sbjct: 190 LLMLAVALFYYLVPDVEQRFRFITPGSVLSVIAWIAASLAYGFYVKNFANYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ + GAELNA + + K
Sbjct: 250 IIILLLYFYLSAAVVLFGAELNAVIEHHSEDGK 282
>gi|291455251|ref|ZP_06594641.1| membrane protein [Streptomyces albus J1074]
gi|291358200|gb|EFE85102.1| membrane protein [Streptomyces albus J1074]
Length = 382
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 105/279 (37%), Gaps = 6/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R+ ++ + F +++ A+ ++ +L++FP ++ +L G G
Sbjct: 78 LRKKSWK--AVLRRTVAEFQDDELADRAAALTYYGVLALFPGLLVLVSLLGVAG-ESTTR 134
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
V++ + P +T + V G L + LAA + +S V A S N
Sbjct: 135 RVLESIKKMAPGPARDVVTSAVEGVQGAGGVGSLLAVVGVLAALWSASGYVGAFIRSSNA 194
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y + E R + + G + V V + + V L +
Sbjct: 195 VYDMPEGRPVWKVLPVRVGTTVALVVMAVGSALIVVFTGDLARRAGSLLGIGDTALTVWS 254
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +L + + + P K + PG + W++ + F Y+ F +
Sbjct: 255 IAKWPVLLLLVIGMIALLFWAAPNTKGPGFRWVTPGSFLALVIWLLASAGFAVYVANFGS 314
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y+ Y LA ++ LV+L++ + +LG E +A +
Sbjct: 315 YNKTYGALAGVVVFLVWLWISNIAILLGLEFDAELARER 353
>gi|46907937|ref|YP_014326.1| ribonuclease BN [Listeria monocytogenes serotype 4b str. F2365]
gi|47094251|ref|ZP_00231961.1| ribonuclease BN, putative [Listeria monocytogenes str. 4b H7858]
gi|217964144|ref|YP_002349822.1| transporter [Listeria monocytogenes HCC23]
gi|226224309|ref|YP_002758416.1| transport protein [Listeria monocytogenes Clip81459]
gi|254826046|ref|ZP_05231047.1| YihY family protein [Listeria monocytogenes FSL J1-194]
gi|254853622|ref|ZP_05242970.1| YihY family protein [Listeria monocytogenes FSL R2-503]
gi|254932848|ref|ZP_05266207.1| YihY family protein [Listeria monocytogenes HPB2262]
gi|255520201|ref|ZP_05387438.1| transport protein [Listeria monocytogenes FSL J1-175]
gi|300764677|ref|ZP_07074668.1| ribonuclease BN [Listeria monocytogenes FSL N1-017]
gi|46881206|gb|AAT04503.1| YihY family protein [Listeria monocytogenes serotype 4b str. F2365]
gi|47017379|gb|EAL08202.1| ribonuclease BN, putative [Listeria monocytogenes str. 4b H7858]
gi|217333414|gb|ACK39208.1| transporter [Listeria monocytogenes HCC23]
gi|225876771|emb|CAS05480.1| Putative transport protein [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606997|gb|EEW19605.1| YihY family protein [Listeria monocytogenes FSL R2-503]
gi|293584402|gb|EFF96434.1| YihY family protein [Listeria monocytogenes HPB2262]
gi|293595286|gb|EFG03047.1| YihY family protein [Listeria monocytogenes FSL J1-194]
gi|300514563|gb|EFK41619.1| ribonuclease BN [Listeria monocytogenes FSL N1-017]
gi|307571289|emb|CAR84468.1| ribonuclease BN, putative [Listeria monocytogenes L99]
gi|328466464|gb|EGF37607.1| transport protein [Listeria monocytogenes 1816]
gi|332312148|gb|EGJ25243.1| Transporter [Listeria monocytogenes str. Scott A]
Length = 289
Score = 167 bits (424), Expect = 1e-39, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|284046224|ref|YP_003396564.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283950445|gb|ADB53189.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 367
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 103/276 (37%), Gaps = 4/276 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVID 64
+ A + F E+ A+ ++ ++LS+FP ++ L G G + V +++D
Sbjct: 70 RGWLATLKRAAKGFREDGLQDWAAALTYYSVLSLFPLLIVFVALIGVFGEYPRTVNSMLD 129
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL--AAAYFSSNGVEALRISLNRAYRV 122
+V P A + + V+ + A + +S + A + N Y V
Sbjct: 130 IVRQIAPGSTADTLESSLSGVVRNKGGAGALLGIGLLTALWSASGYIGAFMRAANAVYDV 189
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R ++ R + + V + +++ FV + + + + +
Sbjct: 190 EEGRPFWKLRPLQLAVTAVMVVLIALLAIGFVLSGSVAKSLGDTIGLGDSAVTVWNIAKW 249
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + + P K + I PG ++ ++ F Y +Y+
Sbjct: 250 PVMLLIAVVMIALLTYVGPNVKHPRFRWITPGAAVGIGILILASLGFAFYAANLGSYNAT 309
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y L ++ L++L++ + + G EL+ +
Sbjct: 310 YGALGGVIVFLIWLWIANLALLFGVELDVELERQRE 345
>gi|289435039|ref|YP_003464911.1| hypothetical protein lse_1674 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171283|emb|CBH27825.1| conserved hypothetical protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 289
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 134/273 (49%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F + + D A+ ++ L S+FP ++ A L ++ + +V +++
Sbjct: 14 IFQVGQTVTGRVGQNDVSGNAAQLAYYMLFSIFPMMLIAATLLAYMHIDK--DSVFNMLK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + + + +L GL +I +A + +SNG+ A+ +LN+AY V R+
Sbjct: 72 EFAPEQILDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKALNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVVQRLLSMFFTLAMLATVGATLLLIVFGQQIGLFLINHLNFSEDFLSFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG IF+ I W V +V F +Y+ F+ YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGAIFSTIGWTVASVGFAYYVNNFANYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 252 IIILMLWFYLTGIILMVGGELNATLAIRKKKKQ 284
>gi|330807955|ref|YP_004352417.1| ribonuclease, ribonuclease_BN-like family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327376063|gb|AEA67413.1| putative ribonuclease, Ribonuclease_BN-like family [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 316
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 123/273 (45%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ + F++++ AS ++ L S+FPFI+F L GFL F +
Sbjct: 11 LHRVMMRTVTEFLDDEMSTYASALAYQMLFSLFPFILFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A + +S GV + ++N AY VVE R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R +
Sbjct: 130 AWKRFPLSIFYTIGIAGMLLAAAALMVLGPQVMGWIAAQVGLETFIVTLWTIVRWPVIVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +
Sbjct: 190 LLMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLGFAFYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISSAVLLLGAEMNAVIEHMSTEGK 282
>gi|313623420|gb|EFR93635.1| transport protein [Listeria innocua FSL J1-023]
Length = 289
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|16803746|ref|NP_465231.1| hypothetical protein lmo1706 [Listeria monocytogenes EGD-e]
gi|224499572|ref|ZP_03667921.1| hypothetical protein LmonF1_07697 [Listeria monocytogenes Finland
1988]
gi|224503369|ref|ZP_03671676.1| hypothetical protein LmonFR_12785 [Listeria monocytogenes FSL
R2-561]
gi|255028332|ref|ZP_05300283.1| hypothetical protein LmonL_02181 [Listeria monocytogenes LO28]
gi|16411160|emb|CAC99784.1| lmo1706 [Listeria monocytogenes EGD-e]
Length = 289
Score = 167 bits (423), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 131/273 (47%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + D A+ ++ L S+FP ++ A L +L + +V +++
Sbjct: 14 IVQVGQAVSARVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ I + + + +L GL +I +A + +SNG+ A+ SLN+AY V R+
Sbjct: 72 EFAPDQIMDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVVQRLLSMFFTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 252 IIILMLWFYLTGIILMIGGELNATLAIRKKKKE 284
>gi|319650226|ref|ZP_08004372.1| hypothetical protein HMPREF1013_00977 [Bacillus sp. 2_A_57_CT2]
gi|317398057|gb|EFV78749.1| hypothetical protein HMPREF1013_00977 [Bacillus sp. 2_A_57_CT2]
Length = 300
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 113/268 (42%), Gaps = 2/268 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
V + F ++ +A+ + +LS+FP ++ ++ +L + +
Sbjct: 3 KVIQFGKKLGKEFKKDRATGLAAEQAYYYMLSIFPLLILLISIVPYLSLDP--QKALSYL 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I D ++ ++ P GL T + + +SNG++A ++N A+ V E R
Sbjct: 61 QSVMPSDSFNVIEDNVVDIITKPNGGLLTFGIIGTLWSASNGMQAFIRAMNDAFDVEETR 120
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ +RLIS G L +I + V + + +V F + ++I R
Sbjct: 121 SFIKSRLISIGLTLGLLAAFIIAMVLPVFGKVIMNFVENFINIPDGMQILINVLRWAIAF 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ P +LPG I + W + + + Y+ F YS Y L
Sbjct: 181 VIMVTVLAILYKVAPNKHFPFKQVLPGAIAATVMWQLISFGLSFYVSNFGNYSATYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
++ +++ ++ G+ ++G E++A
Sbjct: 241 GVIVLMLWFFLTGLALVIGGEISALYHR 268
>gi|170748550|ref|YP_001754810.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170655072|gb|ACB24127.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 375
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 125/273 (45%), Gaps = 9/273 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI F ++ A+A+ ++ LLS+FP I + G + + +
Sbjct: 83 DIAVRVYLEFNKDRVLAVAAGVTFYTLLSLFPAIAALVSCYGLFADVTVINDHLAQLHAV 142
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I D++ ++ A + L S L + + ++ ++A+ +LN Y E R
Sbjct: 143 LPSGAVELIGDQVKRIAAKGSGSLSITFFSSLLLSIWSANAAMKAMFDALNVVYEEEEKR 202
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+++ L S + + A + +++ V V +P+ L ++ LG+ ++ R A +
Sbjct: 203 NFFWLNLRSLTFTVGALLFIIVALNVIVVVPVVLNFL-----GLGSTAWLLAALRWPAIL 257
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L GL ++ F P+ ++ + G + + W+ ++LF+ Y+ F TY+ Y L
Sbjct: 258 IVLLGGLSVLYRFGPSREHARWRWVGVGSVVAGLLWLAASLLFSWYVANFGTYNETYGSL 317
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ + ++++ +LG E+NA + R
Sbjct: 318 GAVIGFMTWIWISSTIVLLGGEINAELEHQTAR 350
>gi|258652199|ref|YP_003201355.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
gi|258555424|gb|ACV78366.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
Length = 371
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 108/269 (40%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I F ++ +A+ ++ A+L++FP ++ +L G +G +I V+
Sbjct: 54 IARRTFREFSDDQCTDLAAALTYYAVLALFPALLALVSLLGLVGQQGQTDQLIGVLTDMG 113
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+A + + Q+ + GL I A + +S V A ++NR Y + E R +Y
Sbjct: 114 AGTVADTLRGPLQQLTENSSTGLALVIGVAGALWSASAYVGAFGRAMNRIYEIREGRPFY 173
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R + L A + +++ V V + + +
Sbjct: 174 KLRPLMMVITLAAVILAGLVAIGLVVSGPVARAVGDALGLGETAVTAWGIAKWPVLLGLA 233
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ P K I G ++WV+ + LF Y+ F+ Y+ Y LA +
Sbjct: 234 ALVVAILYYATPNVKQPTFRWISVGAGIAIVTWVIASALFGLYVSQFANYNKTYGSLAGV 293
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L++ + + GAEL+A M
Sbjct: 294 IVFLLWLWITNLALLFGAELDAEMERGRQ 322
>gi|90418703|ref|ZP_01226614.1| possible membrane protein, ribonuclease [Aurantimonas manganoxydans
SI85-9A1]
gi|90336783|gb|EAS50488.1| possible membrane protein, ribonuclease [Aurantimonas manganoxydans
SI85-9A1]
Length = 396
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 122/275 (44%), Gaps = 8/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ DI F ++ +A+ + LL++FP +L GF+ + I
Sbjct: 76 WKGWKDICLRIYASFFDDRVMLIAAGATFYLLLALFPAFAVFVSLYGFVADPVSIGEHIA 135
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYR 121
+ P + + ++ ++++ + L L A + ++NG++ L ++N AY
Sbjct: 136 FIGQFLPTAGTELLESQLARLVSQDSSSLSLGFVSGLLFALWSANNGIKTLFEAMNVAYG 195
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS++ L++F + L A V + + V F ++I R
Sbjct: 196 EREQRSFFKLNLVAFCFTLGAIFIG----IVLIVTVGVVPVVMAVFGLQSFSEIMIAAMR 251
Query: 182 IYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + ++ + P+ + + ++ G + + W++ ++ F+ Y+ F+ Y+
Sbjct: 252 WPVVFGLIVVAIAMIYRYGPSRRRARWKWVVSGALLAAVVWLLASLGFSWYLQNFANYNA 311
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
MY L +++ ++++++ + FI+GAE+NA M
Sbjct: 312 MYGSLGAVIGFMMWVWISSLIFIIGAEINAEMEHQ 346
>gi|47097606|ref|ZP_00235132.1| ribonuclease BN, putative [Listeria monocytogenes str. 1/2a F6854]
gi|254829230|ref|ZP_05233917.1| YihY family protein [Listeria monocytogenes FSL N3-165]
gi|254832411|ref|ZP_05237066.1| hypothetical protein Lmon1_13734 [Listeria monocytogenes 10403S]
gi|254900789|ref|ZP_05260713.1| hypothetical protein LmonJ_13274 [Listeria monocytogenes J0161]
gi|254913725|ref|ZP_05263737.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254938112|ref|ZP_05269809.1| YihY family protein [Listeria monocytogenes F6900]
gi|284802152|ref|YP_003414017.1| hypothetical protein LM5578_1907 [Listeria monocytogenes 08-5578]
gi|284995294|ref|YP_003417062.1| hypothetical protein LM5923_1859 [Listeria monocytogenes 08-5923]
gi|47014019|gb|EAL05026.1| ribonuclease BN, putative [Listeria monocytogenes str. 1/2a F6854]
gi|258601641|gb|EEW14966.1| YihY family protein [Listeria monocytogenes FSL N3-165]
gi|258610724|gb|EEW23332.1| YihY family protein [Listeria monocytogenes F6900]
gi|284057714|gb|ADB68655.1| hypothetical protein LM5578_1907 [Listeria monocytogenes 08-5578]
gi|284060761|gb|ADB71700.1| hypothetical protein LM5923_1859 [Listeria monocytogenes 08-5923]
gi|293591740|gb|EFG00075.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 289
Score = 167 bits (422), Expect = 2e-39, Method: Composition-based stats.
Identities = 66/273 (24%), Positives = 131/273 (47%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + D A+ ++ L S+FP ++ A L +L + +V +++
Sbjct: 14 IVQVGQAVSARVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ I + + + +L GL +I +A + +SNG+ A+ SLN+AY V R+
Sbjct: 72 EFAPDQIMDFLEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVVQRLLSMFFTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 252 IIILMLWFYLTGIILMIGGELNATLAIRKKKKE 284
>gi|257455356|ref|ZP_05620591.1| tRNA-processing RNAse BN [Enhydrobacter aerosaccus SK60]
gi|257447318|gb|EEV22326.1| tRNA-processing RNAse BN [Enhydrobacter aerosaccus SK60]
Length = 673
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 111/278 (39%), Gaps = 7/278 (2%)
Query: 4 YFCIVF-DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPT 61
F + + I++F++++ A+ ++ + LLS+ P + + + +
Sbjct: 13 IFKHKWVQFLMYLIKNFIDDNCSQKAALLTYTTLLSIVPILTLLVVILSTIPQLAEAREQ 72
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +++F +T + Q + + L I + + + + + + N+ +R
Sbjct: 73 IQNLIFSNILPSTGLQVTKYLNQFTSNSSN-LTIIGVGILFFTTISTLMTIETAFNQIWR 131
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + + ++ + + + L + L I+ + + +K + + + G
Sbjct: 132 VEKKETSWLNLVRYWVIITLLPIVLAIVMIISSTVQSLSFLNQKIGGYGIDWAIWVQIGS 191
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I ++ L F+ P + + L + I + + + F + F++Y +
Sbjct: 192 IAIVLMGLVTMYWFI----PRCQVRFKHALVAGVVVGIIFEILKLTFGAIVDNFTSYKAV 247
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y A + L+++Y+ +LG +++ + I+ ++
Sbjct: 248 YGAFAILPLFLLWIYISWNIILLGVQISYCLTIFETKE 285
>gi|315282669|ref|ZP_07871025.1| transport protein [Listeria marthii FSL S4-120]
gi|313613685|gb|EFR87473.1| transport protein [Listeria marthii FSL S4-120]
Length = 289
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 68/273 (24%), Positives = 131/273 (47%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + D A+ ++ L S+FP ++ A L +L + +V +++
Sbjct: 14 IVQVGQAVSARVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ I + D + +L GL +I +A + +SNG+ A+ SLN+AY V R+
Sbjct: 72 EFAPDQIMDFLEDNLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + L T+ + V ++ + L N R T++
Sbjct: 132 YVVQRLLSMFFTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLV 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 252 IIILMLWFYLTGIILMIGGELNATLAIRKKKKE 284
>gi|290893364|ref|ZP_06556349.1| YihY family protein [Listeria monocytogenes FSL J2-071]
gi|290557015|gb|EFD90544.1| YihY family protein [Listeria monocytogenes FSL J2-071]
Length = 308
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|92119332|ref|YP_579061.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
gi|91802226|gb|ABE64601.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
Length = 386
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 111/272 (40%), Gaps = 8/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
DI+ + E +A+A+ ++ +L ++FP + + G + D
Sbjct: 78 RRWKDILLRVYANVSEHRIFALAAGMTYYSLFAIFPALAAMVAVYGLFSDPATIAKHFDQ 137
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRV 122
V G P +++ +V + + L I + + ++ +++L +LN Y
Sbjct: 138 VSGFVPSGAIDVAREQLTRVASKGNQTLGLTFAIGLAVSLWSANAAMKSLFDTLNIVYGE 197
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + +S + + V ++ V +P+ L YV L++ R
Sbjct: 198 KETRGFVKLNAMSLAFTMTGIVFVLAALGAVVVVPVILNYV----GLSNFADLLVRTARW 253
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A + + + L ++ F P + + I G I W+ + LF+ Y F ++
Sbjct: 254 PAMFVGVALALALIYRFGPDREAPRWRWITWGSAVATILWLAASTLFSWYAANFGKFNET 313
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y L + + + +L++ + +LGAEL+A M
Sbjct: 314 YGSLGAAIGFMTWLWISAIVILLGAELDAQME 345
>gi|289550401|ref|YP_003471305.1| Ribonuclease BN [Staphylococcus lugdunensis HKU09-01]
gi|289179933|gb|ADC87178.1| Ribonuclease BN [Staphylococcus lugdunensis HKU09-01]
Length = 409
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 121/270 (44%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I I ++D +A+ ++ +L++FP ++F L V D+V
Sbjct: 69 NFISYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDP--QQVKDMVSQN 126
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A ++ + + + ++ + + +SNG+ A+ S N AY V + R+
Sbjct: 127 APAETASVVSKIFNDITKNASGSILSVGLILTIWSASNGMTAIMNSFNVAYDVEDGRNPI 186
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ + L + + ++ + I R+ + +
Sbjct: 187 VLKLLSVVFTVVMGLVLAVALTLPTFGTFIKDHLFGAIGLDKQVAWIFDLIRVILPFIII 246
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ I ++ P K+KI S+ PG +FT I W++G+ F Y+ F YS Y LA I+
Sbjct: 247 LLLFITLYSVAPNVKTKIKSVFPGALFTSIIWLLGSFGFGWYLSNFGNYSKTYGSLAGII 306
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + + K
Sbjct: 307 ILLLWLYITCFIIIIGAEINAIIHQRHVIK 336
>gi|16800885|ref|NP_471153.1| hypothetical protein lin1818 [Listeria innocua Clip11262]
gi|16414320|emb|CAC97049.1| lin1818 [Listeria innocua Clip11262]
gi|313618455|gb|EFR90462.1| transport protein [Listeria innocua FSL S4-378]
Length = 289
Score = 166 bits (420), Expect = 3e-39, Method: Composition-based stats.
Identities = 66/263 (25%), Positives = 129/263 (49%), Gaps = 2/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLVVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
P +S ++S+LPG +F+ I W + +V F +Y+ F YS Y + I+ +++ Y+
Sbjct: 202 WVAPNRRSTLISVLPGALFSTIGWTIASVGFAYYVNNFGNYSATYGSIGVIIILMLWFYL 261
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
G+ ++G ELNA++ I +K+
Sbjct: 262 TGIILMIGGELNATLAIRKKKKE 284
>gi|315660133|ref|ZP_07912990.1| YihY family protein [Staphylococcus lugdunensis M23590]
gi|315494814|gb|EFU83152.1| YihY family protein [Staphylococcus lugdunensis M23590]
Length = 409
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 121/270 (44%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I I ++D +A+ ++ +L++FP ++F L V D+V
Sbjct: 69 NFISYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDP--QQVKDMVSQN 126
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A ++ + + + ++ + + +SNG+ A+ S N AY V + R+
Sbjct: 127 APAETASVVSKIFNDITKNASGSILSVGLILTIWSASNGMTAIMNSFNVAYDVEDGRNPI 186
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ + L + + ++ + I R+ + +
Sbjct: 187 VLKLLSVVFTVVMGLVLAVALTLPTFGTFIKDHLFGAIGLDKQVAWIFDLIRVILPFIII 246
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ I ++ P K+KI S+ PG +FT I W++G+ F Y+ F YS Y LA I+
Sbjct: 247 LLLFITLYSVAPNVKTKIKSVFPGALFTSIIWLLGSFGFGWYLSNFGNYSKTYGSLAGII 306
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + + K
Sbjct: 307 ILLLWLYITCFIIIIGAEINAIIHQRHVIK 336
>gi|290958769|ref|YP_003489951.1| ribonuclease [Streptomyces scabiei 87.22]
gi|260648295|emb|CBG71406.1| putative ribonuclease [Streptomyces scabiei 87.22]
Length = 356
Score = 166 bits (420), Expect = 4e-39, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 112/274 (40%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ ++ F +++ A+ ++ +L++FP ++ +L G +G V+D
Sbjct: 46 RSWRSVLKGTLKEFKKDELTDRAAALTYYGILALFPALLALVSLLGIVG-ESATREVLDN 104
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P +T+ + Q+ G + + + A + +S V A S N Y +
Sbjct: 105 IQKLAPGAARDVLTNAVQQMQNNAGLGSVMAIVGLVLAVWSASGYVAAFIRSANAVYDIP 164
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + G ++ V VI + + V V L + +
Sbjct: 165 EGRPVWKVLPVRVGLTMVLMVMAVISALIVVFTGGLAREVGTALGVGDTALTVWSIAKWP 224
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + + + ++ P AK + I PG + + W+ + F Y+ F +Y+ Y
Sbjct: 225 VLILLVTMMIAVLYWATPNAKVRGFRWITPGSLLALLIWMAASAGFAFYVANFGSYNKTY 284
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+A ++ LV+L++ + +LG E +A +
Sbjct: 285 GAVAGVIIFLVWLWITNLAILLGLEFDAELARRR 318
>gi|188579427|ref|YP_001922872.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179342925|gb|ACB78337.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 367
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 58/273 (21%), Positives = 120/273 (43%), Gaps = 9/273 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + F + +A+ ++ A+L++FP + ++ G + + T ++ + G
Sbjct: 75 DIALRLYQEFGNDRILLVAAGVTFYAILALFPAVAALVSIYGAVADPSTISTHLNELRGI 134
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + ++ +++ L S L + + ++ G++A+ +LN AY E R
Sbjct: 135 LPDGAIDIVGGQVKRLVDKGDAALGLTALVSILLSLWSANGGMKAIFDALNIAYEEEEKR 194
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ + L S + A + +V+ V +P AL + L I R A +
Sbjct: 195 SFVMLNLQSLAFTAGALLFVVLALTGIVVVPAALQVL-----GLDQKAWYIALLRFPALL 249
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L ++ + P+ + K + G W+V + LF+ Y+ F +Y+ Y L
Sbjct: 250 ALVIGTLAVLYRYGPSRRKPKWRWVTWGSAVAGTLWLVASGLFSWYVANFGSYNETYGSL 309
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ +LGAELNA M R
Sbjct: 310 GAAIGFMTWIWISTTVVLLGAELNAEMEHQTAR 342
>gi|146339131|ref|YP_001204179.1| putative ribonuclease [Bradyrhizobium sp. ORS278]
gi|146191937|emb|CAL75942.1| conserved hypothetical protein; putative membrane protein; putative
ribonuclease [Bradyrhizobium sp. ORS278]
Length = 353
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 119/273 (43%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++Y E+ + A+A+ ++ LL++FP + + G + ++ + G
Sbjct: 60 DVLYRVYENVGDHRIVALAAGMTFYTLLAIFPALAAMVAIYGLFSDPAKITGHLEQLQGL 119
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P D++ +V A ++ L + + + ++ +++L +LN YR E R
Sbjct: 120 MPGGAIDIARDQLTRVSAKGSQALGVTFLVSLAISLWSANAAMKSLFDTLNVVYREPERR 179
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ IS + A + ++ V +P+ L YV L++ GR A
Sbjct: 180 GFIKLNAISLLFTGGAILFALLAIAAIVVVPVILQYV----GLSDAADLLLRIGRWPAIF 235
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL ++ + P + K I G W+ G+ LF+ Y F +++ Y L
Sbjct: 236 ICVSLGLALIYRYGPDREEPKWRWISWGSALAAALWLGGSALFSWYAANFGSFNATYGSL 295
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ + ++GAEL+A + R
Sbjct: 296 GAAVGFMTWIWISAIVILIGAELDAELEHQTLR 328
>gi|307318689|ref|ZP_07598122.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|306895716|gb|EFN26469.1| ribonuclease BN [Sinorhizobium meliloti AK83]
Length = 328
Score = 165 bits (419), Expect = 5e-39, Method: Composition-based stats.
Identities = 57/277 (20%), Positives = 124/277 (44%), Gaps = 10/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ D+ + + E+ +A+ ++ LLSVFP + ++ G + + +
Sbjct: 32 RGLRDVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATL 91
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + +TD++ + + L L A + + NGV AL ++N AY
Sbjct: 92 LAAVLPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDE 151
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS+ L+S G+ L + ++ +P LA++ ++ R
Sbjct: 152 TEKRSFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEG------LLRFVRW 205
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + G+ ++ + P+ + K+ + G + I W+ ++ F++YI F+ Y+
Sbjct: 206 PVMLLLIAAGITLIYRYGPSREPAKLRWLTWGAALSTICWLGASLAFSYYIDNFANYNAT 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ ++++++ + I+GAELNA + R
Sbjct: 266 YGALGALIGFMLWIWISTMIVIIGAELNAELEHQTAR 302
>gi|302532125|ref|ZP_07284467.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
gi|302441020|gb|EFL12836.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
Length = 343
Score = 165 bits (417), Expect = 7e-39, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 106/274 (38%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ ++ F +++ A+ ++ +L++FP + + V+D
Sbjct: 40 RSWKAVLRGTLKEFKDDELADRAAALTYYGVLALFPA-LLVLVSLLGVVGESTTKQVLDN 98
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P I++ + Q+ G L + L A + +S V A + N Y +
Sbjct: 99 LQKLTPGAARDVISNAVQQLQGNAGVGSLLAIVGLLVAIWSASGYVAAFIRASNAVYDMP 158
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + G ++ V V + + V + + +
Sbjct: 159 EGRPVWKVLPLRVGLTVVLMVLAVASALIVVFTGGLARQAGSALGVGDTAMTVWSIAKWP 218
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + + ++ P AK + + PG + + W+V + F Y+ F +Y+ Y
Sbjct: 219 VLLVLVTGMIALLYWAAPNAKGRGFRWVTPGSLLALVIWMVASAGFAFYVANFGSYNKTY 278
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA ++ LV+L++ + +LG E +A ++
Sbjct: 279 GTLAGVIIFLVWLWITNLAVLLGLEFDAELVRQR 312
>gi|294499057|ref|YP_003562757.1| putative Ribonuclease BN [Bacillus megaterium QM B1551]
gi|294348994|gb|ADE69323.1| putative Ribonuclease BN [Bacillus megaterium QM B1551]
Length = 282
Score = 165 bits (417), Expect = 8e-39, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + E+ +A+ + +LS+FP ++ ++ +L ID+
Sbjct: 2 KKLLSFGKSLGKEIQEDQATGLAAEQAYYYMLSLFPMLILLISIVPYLSIKP--EEAIDL 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P A D + Q ++ P GL T+ L + +SNG+ A ++N+AY V E
Sbjct: 60 LQSVMPGETAAIFKDNVAQFVSQPNGGLLTVGILGTIWSASNGMNAFIRAMNQAYDVKEQ 119
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ R +S + VT+V+ + V + L ++ ++F +++ R
Sbjct: 120 RSFIKVRGLSILLTIGLIVTIVVSLLLPVFGGVLLNWISEWFSLPSGTTVVLNILRWIVG 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ P + PG + + W + ++ F+ Y+ F YS Y L
Sbjct: 180 VGIMVLVLSVLYRLAPNKTFPFAHVWPGALAATLLWQLTSLGFSFYVSNFGNYSATYGSL 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ +++L++ G+ ++G E+NA P
Sbjct: 240 GGVIVLMLWLFLTGLILVIGGEINAIYHRNKTAAPP 275
>gi|307303461|ref|ZP_07583215.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|306902852|gb|EFN33444.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 328
Score = 165 bits (417), Expect = 9e-39, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 125/277 (45%), Gaps = 10/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ D+ + + E+ +A+ ++ LLSVFP + ++ G + + +
Sbjct: 32 RGLRDVFWRVVSQISEDRISLIAAGVTFYVLLSVFPALASLVSIYGLVSDPATIAEQATL 91
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + +TD++ + + L L A + + NGV AL ++N AY
Sbjct: 92 LAAVLPAQSLQMMTDQLETLSSQKTSSLSFGFIAGLLFALWSARNGVGALFEAMNIAYDE 151
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS+ L+S G+ L + ++ +P LA++ ++ R
Sbjct: 152 TEKRSFIRLTLLSIGFTLAGLILTAVLIAAIAVLPAVLAFLHLELEG------LLRFVRW 205
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + G+ ++ + P+ + K+ + G + I W+V ++ F++YI F+ Y+
Sbjct: 206 PVMLLLIAAGITLIYRYGPSREPAKLSWLTWGAALSTICWLVASLAFSYYIDNFANYNAT 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ ++++++ + I+GAELNA + R
Sbjct: 266 YGALGALIGFMLWIWISTMIVIIGAELNAELEHQTAR 302
>gi|153005865|ref|YP_001380190.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
gi|152029438|gb|ABS27206.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
Length = 359
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 121/264 (45%), Gaps = 6/264 (2%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
E ++ +A+ ++ +LS+FPF++F LA + +++ + P + +
Sbjct: 12 EELSKDQVTDIAATVTYYGVLSLFPFVLFLVALASVVIEPSDAERMVEELGQVAPGAVTQ 71
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I D I Q+ A L A+AA + +S GV A+ +LN AY V E R ++ R I+
Sbjct: 72 IIGDRIRQLGAEQNVSLLGFGAVAALWAASGGVTAVMRALNTAYDVKEGRPFWKVRGIAI 131
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
LLA +I + V +A + I R+ L + + V
Sbjct: 132 LMTLLAGALGLIAALVAIAAAPLAEAIGGPLG------TAITWLRLPVAGLVMMLLWALV 185
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ LP + + I PG +F + WV+ + F+ Y+ +F +Y Y LA ++ L++++
Sbjct: 186 YYVLPDVEQRFRFITPGSVFGVLVWVLASWGFSRYVTSFGSYDKTYGSLAGVIVLLLWMW 245
Query: 257 MLGVFFILGAELNASMIIYYWRKK 280
+ + ++GAE+NA + K
Sbjct: 246 ITSLVLLVGAEVNAFIEHRSVEGK 269
>gi|148652442|ref|YP_001279535.1| putative ribonuclease BN [Psychrobacter sp. PRwf-1]
gi|288559241|sp|A5WD44|Y630_PSYWF RecName: Full=UPF0761 membrane protein PsycPRwf_0630
gi|148571526|gb|ABQ93585.1| putative ribonuclease BN [Psychrobacter sp. PRwf-1]
Length = 538
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 110/269 (40%), Gaps = 6/269 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
F+ + I +F+++DG A+ ++ + LLS+ P + + + A + +++
Sbjct: 15 WFNFLRFLIGNFIKDDGQQKAASLTYTTLLSIVPILTVLLMILSSVPALESVREQISNII 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ +++ I A + L I ALA + + + + N+ +RV +
Sbjct: 75 YSNLLPQSGLQVSEYINNF-AEKSSNLTAIGALALFVTTIMTLTTIERAFNQIWRVEDRS 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + + L + L V A+ ++ + + +
Sbjct: 134 GGIKSIVRYWTIITLGPLVLGTAFLVSSAVQSLSFLNQQVAGYGIDWGFWVQ----VVSF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
G I ++ F+P AK + + +F +++ + F + F++Y +Y A
Sbjct: 190 AVTIAGFIGMYWFIPKAKVPLKNAAIAGVFVAVTFELLKYSFGIIMSNFTSYEAIYGAFA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
++ L+++Y+ +LG E++ ++ I+
Sbjct: 250 ALPIFLLWIYLSWNLILLGVEISYTLTIF 278
>gi|54023610|ref|YP_117852.1| putative ribonuclease [Nocardia farcinica IFM 10152]
gi|54015118|dbj|BAD56488.1| putative ribonuclease [Nocardia farcinica IFM 10152]
Length = 326
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 49/282 (17%), Positives = 110/282 (39%), Gaps = 4/282 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + ++ + F ++ A+ ++ ++LSVFP I+ L G L +
Sbjct: 21 RLNWRSWWGVLRRTVTEFRADNVTDWAAALTYYSVLSVFPGIIVLTALLGAL-SPTATDE 79
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + P + + D I ++ + + A + +S + A + N
Sbjct: 80 LVTSIREIGPGSGTQLLVDAIEELRGASSLAGPMALFGVATALWTASGYIGAFMRAANAI 139
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V E R + T + G V + + + VA V + + +
Sbjct: 140 YEVEEGRPLWKTVPVRVGLTAAMVVLIAVTAVGVVATGGIARRVGDWLGLGPTAVAVWEV 199
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + ++ P A+ + PG + + WV+ + F Y+ F +Y
Sbjct: 200 AKWPVLAVLVSLAFALLYWVAPNARQPGFRWLSPGSVLAVLVWVLASAGFAFYVANFGSY 259
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +Y L + LV++++ V +LGAE +A + ++
Sbjct: 260 NKVYGSLGGVAVFLVWVWISNVAVLLGAEFDAELARGRRIEQ 301
>gi|116873142|ref|YP_849923.1| hypothetical protein lwe1726 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116742020|emb|CAK21144.1| conserved hypothetical protein [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 289
Score = 164 bits (416), Expect = 1e-38, Method: Composition-based stats.
Identities = 66/273 (24%), Positives = 131/273 (47%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + D A+ ++ L S+FP ++ A L +L + +V +++
Sbjct: 14 IVQVGQAVSARVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIK 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ I + + + +L GL +I +A + +SNG+ A+ SLN+AY V R+
Sbjct: 72 EFAPDQIMDFLEENLNTLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRN 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + RL+S + + T+ + V ++ + L N R T++
Sbjct: 132 YVVQRLLSMFFTMSMLATVGATLLLLVFGQQIGMFLINHLHFSEDFLSFWNNLRWTVTLI 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ F++ P +S ++S+LPG +F+ I W V +V F +Y+ F YS Y +
Sbjct: 192 VIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASVGFAYYVNNFGNYSATYGSIGV 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 252 IIILMLWFYLTGIILMIGGELNATLAIRKKKKE 284
>gi|295704377|ref|YP_003597452.1| putative ribonuclease BN [Bacillus megaterium DSM 319]
gi|294802036|gb|ADF39102.1| putative Ribonuclease BN [Bacillus megaterium DSM 319]
Length = 282
Score = 164 bits (415), Expect = 1e-38, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 121/276 (43%), Gaps = 2/276 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + E+ +A+ + +LS+FP ++ ++ +L IDV
Sbjct: 2 KKLLSFGKSLGKEIQEDQATGLAAEQAYYYMLSLFPMLILLISIVPYLSIKP--EEAIDV 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P A D ++Q ++ P GL T+ L + +SNG+ A ++N+AY V E
Sbjct: 60 LQSVMPGETAAIFKDNVVQFVSQPNGGLLTVGILGTIWSASNGMNAFIRAMNQAYDVKEQ 119
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ R +S + VT+V+ + V + L ++ ++F +I+ R
Sbjct: 120 RSFIKVRGLSILLTIGLIVTIVVSLLLPVFGGVLLNWISEWFSLPSGTTVILNVLRWIIG 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ P + PG + + W + ++ F+ Y+ F YS Y L
Sbjct: 180 VGIMVLVLSVLYRLAPNKTFPFAHVWPGALAATLLWQLTSLGFSFYVSNFGNYSATYGSL 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ +++L++ G+ ++G E+NA P
Sbjct: 240 GGVIVLMLWLFLTGLILVIGGEINAIYHRNKTAAPP 275
>gi|283457804|ref|YP_003362396.1| hypothetical protein RMDY18_07440 [Rothia mucilaginosa DY-18]
gi|283133811|dbj|BAI64576.1| predicted membrane protein [Rothia mucilaginosa DY-18]
Length = 455
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 116/276 (42%), Gaps = 6/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ I+ AI F G MA+ ++ +LS+FP ++ +L G G + ++ +
Sbjct: 49 ILYILRRAIYKFGANGGTDMAAALTYFTVLSIFPALLAIVSLLGVFGHGEESAAVILAFL 108
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + D I Q+ GL L+A + +S + +LN Y V E
Sbjct: 109 KDNAPAQMYAILEDPIKQITGDHGAGLVLLTGILSALWSASGYTGSFGRALNTVYNVREG 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRI 182
R +I + ++ + + +V+M + + L V ++ P + + LI NGR
Sbjct: 169 RPGWILKPLNVFVTTVIIILVVLMMLMMLLGVTVLDMVGRYVPETVDMELIKLIWLNGRW 228
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + ++ P + K + PG +GA FT Y FS Y+
Sbjct: 229 VLILFMAIALITLLYAATPNVRRYKAWRLSPGAALALFGMGLGAFGFTLYANNFSKYNAT 288
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + ++ L+F++++ + GA L+A +++
Sbjct: 289 YGLIGGVIVMLLFIWIMNNMLLFGAHLDAEIMLMRQ 324
>gi|157963720|ref|YP_001503754.1| ribonuclease BN [Shewanella pealeana ATCC 700345]
gi|189039573|sp|A8H9I2|Y3909_SHEPA RecName: Full=UPF0761 membrane protein Spea_3909
gi|157848720|gb|ABV89219.1| putative ribonuclease BN [Shewanella pealeana ATCC 700345]
Length = 340
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 106/275 (38%), Gaps = 8/275 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + ++ + F E+ A H++ LLS+ P + ++ +
Sbjct: 11 RSFLLSIWAFFLHLLSRFKEDQVNIKAGHLAYVTLLSLVPIVAVMFSMLSAFPVFSGIRE 70
Query: 62 -VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ V+ + + I + +A +KG ++ +A + + A+ +LN +
Sbjct: 71 KLEGFVYDNFLPAAGDTVQIYINEFVANASKG-TSVGIVALMVVALMLISAIDKALNSIW 129
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R E R ++ + + + L V + I + L ++
Sbjct: 130 RTKEKRQAAVSFSMYWMVLTLGPVLVGASLVATSYIVSLKLFSE------TELSGVVPIL 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
ML + +++ +P K K + L G + + + +G F Y+ F +Y
Sbjct: 184 IERLPMLFSVAAFLLLYMVVPIKKVKFLHALLGALVAAMLFELGKKGFAFYVTQFPSYEA 243
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ V ++GAE+ A + Y
Sbjct: 244 IYGALATIPILFVWVYVSWVIVLVGAEITAGLPEY 278
>gi|209964739|ref|YP_002297654.1| ribonuclease BN family protein [Rhodospirillum centenum SW]
gi|209958205|gb|ACI98841.1| ribonuclease BN family protein [Rhodospirillum centenum SW]
Length = 327
Score = 164 bits (414), Expect = 2e-38, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 119/277 (42%), Gaps = 8/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I+ + ++ W +A+ ++ LL++FP + +L G + Q V +
Sbjct: 32 RGWWSILKRTLAESSRDNVWVVAAGVAFLTLLAIFPALTATFSLYGLVADPQQVEEQVAA 91
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + + ++ + + L I A + +S GV+AL +LN Y
Sbjct: 92 LASVLPAQGREVLVGQLHALAGQSGEALGFGLVIGLGIALWSASGGVKALMSALNIVYEE 151
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS+ + L + L+ + V +A P+ L ++ G +++ R
Sbjct: 152 EEKRSFLHFTGTALALTLGFILLLIFLIAVVIATPVVLGFL----GLGGTADVLVRLLRW 207
Query: 183 YATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ +++ + G + W+VG++ F+ YI F+ Y+
Sbjct: 208 PLLACGIAGALAVLYRYGPSRARARWRWVSWGSAAATLLWIVGSIAFSLYITHFADYNAT 267
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L + + L++LY+ +LGAEL+A M R
Sbjct: 268 YGSLGAGIILLLWLYLGAYAVLLGAELDAEMEHQTAR 304
>gi|170745562|ref|YP_001767019.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170659163|gb|ACB28217.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 351
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 123/273 (45%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+++ + F + A A ++ ALL+ FP + ++ + + ++ G
Sbjct: 57 DVLFRVVYSFPRDRVLATAGGVAFFALLATFPALATIVSVYSLFADPHAISQHVSLLAGV 116
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + ++D++++V L T S L A + +++GV AL +LN YR E R
Sbjct: 117 LPSGVLDLLSDQLIRVAQQSTGALSTASLVSVLIAFWSANSGVSALFDALNVIYREREKR 176
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S +F + L + + + + V +P+AL + ++ R +
Sbjct: 177 SLMRFYATTFLFTLSGILFALTATSLVVVLPIALNQL----GLGALTDALLRLVRWPGLL 232
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL + + P + +K + G +SWV +V F+ Y+ +F +Y+ +Y L
Sbjct: 233 ILVSLGLAVTYRYGPGRRDAKWRWVSWGGAAAAVSWVCASVSFSWYVASFDSYNRIYGSL 292
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + +++ V +LGA+LNA + R
Sbjct: 293 GAGIGFMTWIWFSVVIVLLGAKLNAEIERQTAR 325
>gi|91978756|ref|YP_571415.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB5]
gi|91685212|gb|ABE41514.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB5]
Length = 384
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 115/270 (42%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ + A+A+ ++ +LL++FP I + G + D + G
Sbjct: 90 DMLLRVVRKMSAHRIMALAAGMTYYSLLAIFPAIAALVAVYGLFADPSTIARHSDQLAGF 149
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P D++ +V + A+ L + + ++ +++L +LN Y E R
Sbjct: 150 LPGGALDVAQDQLTRVASNGAQTLGLTFLIGLGISLWSANAAMKSLFDTLNVVYGEEEKR 209
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ IS G+ + + ++ V IP+ L +V ++ GR A
Sbjct: 210 GFVKLNAISLGFTIGGVLFVLAALGCIVMIPVILGFVGMSSFGDR----LLSAGRWPAMY 265
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L + L ++ + P+ + + I G + W+ + LF+ Y +F ++ Y L
Sbjct: 266 LVLSVALAVIYRYGPSREATPWRWISWGSATAAMVWLAASTLFSWYAASFGQFNETYGSL 325
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+++ + +L+M + +LGAE++A++
Sbjct: 326 GAVVGFMTWLWMSAIVILLGAEIDAALEHQ 355
>gi|93005366|ref|YP_579803.1| ribonuclease BN, putative [Psychrobacter cryohalolentis K5]
gi|92393044|gb|ABE74319.1| ribonuclease BN, putative [Psychrobacter cryohalolentis K5]
Length = 525
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 108/274 (39%), Gaps = 6/274 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDV 65
F + HF E++ A+ ++ + LLS+ P + + + A V + +V
Sbjct: 17 RWFQFLRFLTRHFFEDNCQQKAASLTYTTLLSIVPILTVLLMILSSVPALASVRAQIYEV 76
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
++ + ++ I A + L I A+ + + + + + N+ +RV +
Sbjct: 77 IYSNLLPQSSLQVSKYINNF-AEKSSNLTIIGAMFLLFTTIMTLTTIERAFNQIWRVEDR 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ L + V L + L A+ R+ + + +
Sbjct: 136 SGGMRSMLRYWTIVTLGPLVLGTAFIASSAVQSLSLLNRQIGGYGIDWSFWVQ----IVS 191
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ G I ++ F+P A+ + +F I + + LF + F++Y +Y
Sbjct: 192 IAVTIAGFISMYWFIPKARVPAKNAAIAGVFVAIVFELMKHLFGTVMANFTSYEAIYGAF 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A++ L+++Y+ +LG E++ ++ I+ ++
Sbjct: 252 AALPIFLLWIYLSWNLILLGVEISYTLTIFETKE 285
>gi|239933081|ref|ZP_04690034.1| ribonuclease BN family membrane protein [Streptomyces ghanaensis
ATCC 14672]
gi|291441431|ref|ZP_06580821.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291344326|gb|EFE71282.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 359
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 106/268 (39%), Gaps = 4/268 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++ F +++ A+ ++ +LS+FP + + V++ + P
Sbjct: 60 LKGSLREFKDDELTDRAAALTYYGVLSLFPA-LLVLVSLLGVVGKSATDNVLESLQQLAP 118
Query: 72 EVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ IT + Q+ G + + + A + +S V A S N Y + E R +
Sbjct: 119 GAVRDIITRAVEQLEGSAGVGSIVAVVGLVLAVWSASGYVAAFIRSANAVYDMPEGRPIW 178
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ G ++ V VI S + V + + + ++ +
Sbjct: 179 KVLPVRVGMTVVLMVLAVISSLIVVFTGGLARRAGDALGLGDTAVTVWSIAKWPVLVVLV 238
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I + ++ P K + I PG + + W++ + F Y+ F++Y+ Y +A +
Sbjct: 239 TIMIALLYWAAPNTKIRGFRWITPGSLLALVIWLIASAGFAFYVANFASYNKTYGTMAGV 298
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ LV+L++ + +LG E +A +
Sbjct: 299 IVFLVWLWITNLAILLGLEFDAEIARQR 326
>gi|302556884|ref|ZP_07309226.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
gi|302474502|gb|EFL37595.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
Length = 320
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 107/268 (39%), Gaps = 4/268 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++ F +++ A+ ++ +LS+FP ++ ++ G G V++ + P
Sbjct: 21 LKGSLREFKDDELTDRAAALTYYGVLSLFPALLALVSVLGLTGR-STTDKVLENLQDLAP 79
Query: 72 EVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
IT + Q+ G + + L A + +S V A S N Y V E R +
Sbjct: 80 GSARDIITQAVRQLQDNAGVGSLMAVVGLLLAVWSASGYVAAFIRSANAVYDVPEGRPVW 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ FG + V V+ + + V L + + +L +
Sbjct: 140 KVLPVRFGVTVALLVLAVLSALIVVFTGGLARRAGDALGLGDTALTVWSIAKWPVLVLLV 199
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ P AK + I PG W+V + F Y+ F +Y+ Y +A +
Sbjct: 200 VVMIALLYWAAPNAKVRGFRWITPGSFLALAIWLVASAGFAFYVANFGSYNKTYGTMAGV 259
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ L++L++ + +LG E +A +
Sbjct: 260 IVFLIWLWITNLAILLGLEFDAEIARQR 287
>gi|297563154|ref|YP_003682128.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296847602|gb|ADH69622.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 330
Score = 163 bits (412), Expect = 3e-38, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 113/271 (41%), Gaps = 3/271 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + F E+ +A+ ++ A+LS+FP ++ +L G G T+ D +
Sbjct: 30 WWASLRRTVGEFKEDALADLAAGLTYYAILSLFPALLVLVSLLGLAG-PSATQTLTDNIS 88
Query: 68 GAWPEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P A+ +T I + A +S A + +S + A + N Y V E
Sbjct: 89 ATMPADAARLVTTAIENLQGNQTAAGVFGLVSLAIALWSASGYIAAFMRASNVVYDVPEG 148
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + T I G LL V L + A A+V + ++ + +
Sbjct: 149 RPIWKTLPIRVGVTLLMVVLLSLTVVGVALTGSAAAWVGQLLGLGSTVVTVWNIAKWPVL 208
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + + ++ P A+ + PG + + W++ + F Y+ F++Y Y +
Sbjct: 209 LLIVVFMIALLYWASPNARRGFRWVSPGSVLAVVLWLLASAAFAFYVANFASYGRTYGTM 268
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A+++ LV+L++ + +LG E NA +
Sbjct: 269 ATVVVFLVWLWITNIAILLGEEFNAEIERGR 299
>gi|328880192|emb|CCA53431.1| Ribonuclease BN [Streptomyces venezuelae ATCC 10712]
Length = 374
Score = 162 bits (411), Expect = 4e-38, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 103/274 (37%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
I+ + FV ++ A+ ++ LL++FP + + V++
Sbjct: 50 RSWLAILRRSAREFVSDELTDRAAALTYYGLLALFPA-LLVLVSLLGVSGRSTTDKVLES 108
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
G P + + + P G + T+ L A + +S V A S NR Y V
Sbjct: 109 FGGITPGPAHDVLDQAVENLQGAPGTGAAMATVGVLLALWSASGYVGAFMRSANRVYGVP 168
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + G L V + + V + L + +
Sbjct: 169 EGRPLWKVLPVRLGLTALLVVMAAASALIVVLTGEVARRAGDLLGVGDSALTVWAIAKWP 228
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + + L ++ P +S+ I PG + W+ + F Y+ F+TY+ +Y
Sbjct: 229 VLVVLVTMMLALLYWASPNVESRGWRWITPGSALALLIWLAASAGFAVYVSEFATYNRVY 288
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ ++ L++L++ + +LG E +A +
Sbjct: 289 GTMGGVVVFLIWLWISNLAVLLGLEFDAETLRQR 322
>gi|197116537|ref|YP_002136964.1| ribonuclease BN family protein [Geobacter bemidjiensis Bem]
gi|197085897|gb|ACH37168.1| ribonuclease BN family protein [Geobacter bemidjiensis Bem]
Length = 316
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 68/286 (23%), Positives = 131/286 (45%), Gaps = 5/286 (1%)
Query: 1 MREYFCI----VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH 56
+R YF + ++ A + F EED A+ ++ L + FPF++F L +L
Sbjct: 4 LRRYFKLGDTSYKELAKRAFKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPIP 63
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ V+D P I D I + +GL ++ + A + SSN + ++ ++
Sbjct: 64 HLLDYVLDNASRVLPGETFTLIEDNIQALFTNKKQGLLSMGIVLALWASSNAIVSVMDAM 123
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N Y V E R ++ RLI+ G V+ SV ++ + YV G +
Sbjct: 124 NNLYDVKEGRPFWKVRLIAIGLVIGLSVLFLVAMAALMFGNQIGDYVAGLINFGGAFKVA 183
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + T+ L + + ++ F P + + + I PG + SW++ ++ F++YI F
Sbjct: 184 WFAALVPVTLFVLVLAVAVIYYFTPDVEHQWVWISPGAVIAIPSWILMSLAFSYYINNFG 243
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY-WRKKP 281
+Y Y + +++ L++LY+ G+ + GA +N+ + KKP
Sbjct: 244 SYDKTYGSIGAVIVLLLWLYLTGLIILAGAVVNSVIEHSSAEGKKP 289
>gi|302532213|ref|ZP_07284555.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
gi|302441108|gb|EFL12924.1| ribonuclease BN family membrane protein [Streptomyces sp. C]
Length = 381
Score = 162 bits (410), Expect = 5e-38, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 103/274 (37%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + F +++ A+ ++ +L++FP + + V+D
Sbjct: 60 RSWKAVLRGTVREFGDDELADRAAALTYYGVLALFPG-LLVLVSLLGIAGDSVTRQVLDQ 118
Query: 66 VFGAWPEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P I++ + ++ A + L + + A + +S V A + N Y V
Sbjct: 119 LQALTPGAARDVISEAVERLRADAGVSSFLAAVGPVVAVWSASGYVGAFIRAANAVYDVP 178
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + G + V + + V + + +
Sbjct: 179 EGRPVWRVLPLRLGLTVTLMGLAVASALIVVFTGGLARRAGAALGVGDTAMAVWSTVKWP 238
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + + ++ P A+ + + PG + + W+ + F Y+ F++Y+ Y
Sbjct: 239 VLLVLVTAMIAILYWAAPNARGRGFRWVSPGSVLALVIWMTASGGFAFYVAHFASYNRTY 298
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA ++ LV+L++ + +LG E +A +
Sbjct: 299 GTLAGVIIFLVWLWITNLAVLLGLEFDAELSRQR 332
>gi|114704910|ref|ZP_01437818.1| hypothetical protein FP2506_08236 [Fulvimarina pelagi HTCC2506]
gi|114539695|gb|EAU42815.1| hypothetical protein FP2506_08236 [Fulvimarina pelagi HTCC2506]
Length = 373
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 53/275 (19%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
DI F E+ +A+ + LL++FP +L GF+ + I
Sbjct: 60 LKGWKDIGLRLYSSFFEDRVMLIAAGATFYLLLALFPAFAVFVSLYGFVSDPATISDHIA 119
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYR 121
+ P+ + + ++ + L L A + ++NG++ L ++N AY
Sbjct: 120 FIGQFLPQAGTELLESQLDTLARQDPASLSVGFLTGFLFAMWSANNGIKTLFEAMNVAYG 179
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS+ ++F + + + +++ IP + + + I R
Sbjct: 180 ETEQRSFLKLNAVAFCFTIGMIIVGIVLITAIGVIPAIMKIL----GLQTFSEIFIAALR 235
Query: 182 IYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L + + ++ + P+ K + ++ G T W+V ++ F+ Y+ F+ Y+
Sbjct: 236 WPVVFLLIVAAIAAIYRYGPSRKRARWKWVIGGAFLTAFVWLVASISFSWYLQNFANYNA 295
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L +++ ++++++ V FI+GAE+NA M
Sbjct: 296 TYGSLGAVIGFMMWVWVSSVIFIIGAEVNAEMEHQ 330
>gi|71065116|ref|YP_263843.1| tRNA-processing RNAse BN [Psychrobacter arcticus 273-4]
gi|71038101|gb|AAZ18409.1| tRNA-processing RNAse BN [Psychrobacter arcticus 273-4]
Length = 525
Score = 162 bits (410), Expect = 6e-38, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 106/270 (39%), Gaps = 6/270 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDV 65
F + HF E++ A+ ++ + LLS+ P + + + A V + +V
Sbjct: 17 RWFQFLRFLTRHFFEDNCQQKAASLTYTTLLSIVPILTVLLMILSSVPALASVRAQIYEV 76
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
++ + ++ I A + L I A+ + + + + + N+ +RV +
Sbjct: 77 IYSNLLPQSSLQVSKYINNF-AEKSSNLTIIGAMFLLFTTIMTLTTIERAFNQIWRVEDR 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ L + V L + L A+ R+ + + +
Sbjct: 136 SGGMRSMLRYWTIVTLGPLVLGTAFIASSAVQSLNLLNRQIGGYGIDWSFWVQ----IVS 191
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ G I ++ F+P A+ + +F I + + LF + F++Y +Y
Sbjct: 192 IAVTIAGFISMYWFIPKARVPAKNAAIAGVFVAIVFELMKHLFGTVMANFTSYEAIYGAF 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
A++ L+++Y+ +LG E++ ++ I+
Sbjct: 252 AALPIFLLWIYLSWNLILLGVEISYTLTIF 281
>gi|296534422|ref|ZP_06896866.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
gi|296265251|gb|EFH11432.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
Length = 340
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 117/277 (42%), Gaps = 8/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I+ A E+ A+ ++ ALLSVFP + +L G V +
Sbjct: 49 RGWWSILKRAAIEANEDRIMTEAAGVTFYALLSVFPALTALVSLFGLFADPAMVGQQLQQ 108
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRV 122
G P + I +++ ++ + L + A + ++ G +A+ +LN Y
Sbjct: 109 AEGFIPAGGMQIIDEQLRRLASGERGSLGFSAVLGLGVALWSANQGTKAMFDALNIVYEE 168
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + LI+ + L A V ++ V +P+ LA+ + L++ R
Sbjct: 169 KEKRGFLRRTLITLAFTLGALVFTMLAMSAVVVLPVVLAFA----GFESSTELLLRLARW 224
Query: 183 YATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + L ++ F P+ K++ + G +F ++W + F+ Y+ F Y
Sbjct: 225 PLLILFITALLATLYRFGPSREKARWRWVSWGGVFAALAWAALSAGFSFYVGNFGNYDAT 284
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ + ++++ + + GAELNA M R
Sbjct: 285 YGSLGAVIGFMTWIWLSAMVVLFGAELNAEMEHQTAR 321
>gi|253698774|ref|YP_003019963.1| ribonuclease BN [Geobacter sp. M21]
gi|251773624|gb|ACT16205.1| ribonuclease BN [Geobacter sp. M21]
Length = 316
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 1/270 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
A + F EED A+ ++ L + FPF++F L +L + V++ P
Sbjct: 20 KRAYKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPVPHLLDYVLENASRLLPG 79
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I D I + +GL ++ + A + SSN + ++ ++N Y V E R ++ R
Sbjct: 80 ETFTLIKDNIQALFTNKKEGLLSMGIVLALWASSNAIVSVMDAMNNLYDVKEGRPFWKVR 139
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI+ G V+ SV ++ + YV ++ + + T+ L +
Sbjct: 140 LIAIGLVVGLSVLFLLAMAALMFGNQIGDYVAGLIHFGEAFKVVWFAALVPITLFVLILA 199
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ F P + + + I PG + SW+ ++ F+ YI F +Y Y + +++ L
Sbjct: 200 VAVIYYFTPDVEHQWVWISPGAVIAIPSWIFMSLGFSAYINNFGSYDKTYGSIGAVIVLL 259
Query: 253 VFLYMLGVFFILGAELNASMIIYYWR-KKP 281
++LY+ G+ + GA +N+ + KKP
Sbjct: 260 LWLYLTGLIILAGAVINSVIEHSSEEGKKP 289
>gi|150376889|ref|YP_001313485.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150031436|gb|ABR63552.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 328
Score = 162 bits (409), Expect = 6e-38, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 122/277 (44%), Gaps = 10/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ D+ + + E+ +A+ ++ LLSVFP + ++ G + +
Sbjct: 32 RGLRDVFWRVVAQVSEDRISLVAAGVTFYVLLSVFPALASLVSIYGLVSDPGTIAEQASY 91
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + +TD++ + + L L A + + NGV AL ++N AY
Sbjct: 92 LAAILPAQSLQLMTDQLKALASQNTSSLSLGFIGGLLFALWSARNGVSALFEAMNIAYDE 151
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + L+S G+ L + ++ +P L+++ II R
Sbjct: 152 TEKRGFIRLALLSIGFTLAGLILTAVLIGAIAVLPALLSFLDLKLQG------IISFARW 205
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + ++ + P+ + K+ + G + + W+V ++ F++YI F+ Y+
Sbjct: 206 PVMLLLIAAVITLIYRYGPSREPAKLRWLTWGAALSTVCWLVASLAFSYYIDNFANYNAT 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ ++++++ + I+GAELNA + R
Sbjct: 266 YGALGALIGFMLWIWISTMIVIVGAELNAELEHQTAR 302
>gi|109900439|ref|YP_663694.1| putative ribonuclease BN [Pseudoalteromonas atlantica T6c]
gi|109702720|gb|ABG42640.1| putative ribonuclease BN [Pseudoalteromonas atlantica T6c]
Length = 320
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 57/278 (20%), Positives = 120/278 (43%), Gaps = 8/278 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F +DI+ ++ ++++ +A+ + LL+VFP +V ++ G L + + ++
Sbjct: 17 FSGWWDILRRTVKKMLDDNLSLIAAGVGFYFLLAVFPLLVAFISIYGLLVSPDELQQHLN 76
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYR 121
+ G P+ + I+ ++ ++++ L S L A + +S G +A+ + N Y
Sbjct: 77 QLIGVVPDQGRQIISQQVERIMSKSNTALSTGVVFSTLFAVWSASKGAQAMVTACNITYG 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + + ++ A + LV F +P+ +YV +++
Sbjct: 137 QNQNRGFLMMLVMRVLLTASAVMLLVAALFTIAVLPILFSYV----GLHHYASILVQWLT 192
Query: 182 IYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L + L + + P + K + PG + WV + F+ Y+ F Y
Sbjct: 193 WPFLALVFNLALSAFYRYGPHRSTAKWRWVTPGSLLASTLWVAFSFAFSFYLGQFGQYDK 252
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
MY L S++ L++ Y+ +LGAE NA+M +
Sbjct: 253 MYGSLGSVVVLLMWFYLTAYIILLGAEFNAAMEHQTEK 290
>gi|148253887|ref|YP_001238472.1| hypothetical protein BBta_2397 [Bradyrhizobium sp. BTAi1]
gi|146406060|gb|ABQ34566.1| putative membrane protein of unknown function with ribonuclease
domain [Bradyrhizobium sp. BTAi1]
Length = 352
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 118/277 (42%), Gaps = 8/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
D++Y ++ E A+A+ ++ LL++FP + + G + ++
Sbjct: 55 RGWKDVLYRVYQNITEHRIVALAAGMTFYTLLAIFPALAALVAIYGLFSDPARITGHLEQ 114
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRV 122
+ G P D++ +V A ++ L IS + + ++ +++L +LN YR
Sbjct: 115 LQGLLPGGAIDIARDQLTRVSAKGSQALGLTFGISLAISLWSANAAMKSLFDTLNVVYRE 174
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R ++ IS + A + ++ V +P+ L L++ GR
Sbjct: 175 PETRGFFKLNAISLLFTGGAILFALVAIGAIVVVPVVLH----SMGLSDAADLLLRIGRW 230
Query: 183 YATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A + + +GL ++ + P + K I G W+ G+ LF+ Y F +++
Sbjct: 231 PAIFVCVSLGLALIYRYGPDREEPKWRWISWGSALAAALWLGGSALFSWYAANFGSFNAT 290
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L + + + ++++ + ++G EL+A + R
Sbjct: 291 YGSLGAAIGFMTWIWISAIVILIGGELDAELEHQTLR 327
>gi|94968858|ref|YP_590906.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94550908|gb|ABF40832.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 341
Score = 162 bits (409), Expect = 7e-38, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 107/271 (39%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ +++ + A A ++ +LS+FP ++ A + L
Sbjct: 40 KLTLRGWKNVLRRSAVDIDNNHIMAFAGSLAYYFVLSLFPALIALAAVVSLLPMPDLFQN 99
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ V P+ K ++ + V+ + L + + + + +S+G + SLN AY
Sbjct: 100 IMSVFGRVLPDESMKLVSKVVADVIRPHSGRLLSFGLIGSLWTASSGFSGMIESLNVAYG 159
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E R+W+ TRL++ G LL L + P L LL R
Sbjct: 160 VPETRAWWKTRLLAIGLTLLVGGMLTVSILCMTVGPHFLEIFADKIGFGPMFLLTWKIVR 219
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + ++ P + M L G + +WVV ++ Y F+ ++
Sbjct: 220 WPIAFALVVLSIEAIYFLAPNVRQHFMHTLTGALIAVGAWVVLSLALGVYFGKFAHFNKT 279
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASM 272
Y L + + L +LY + ++G E+N+ +
Sbjct: 280 YGVLGAAIGLLTWLYWTSLAILVGGEVNSEI 310
>gi|90418256|ref|ZP_01226168.1| putative Ribonuclease BN, possibly membrane-associated
[Aurantimonas manganoxydans SI85-9A1]
gi|90337928|gb|EAS51579.1| putative Ribonuclease BN, possibly membrane-associated
[Aurantimonas manganoxydans SI85-9A1]
Length = 420
Score = 161 bits (408), Expect = 1e-37, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 123/273 (45%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + ++ +A+ ++ LL+ P + ++ G V ++
Sbjct: 78 DVAWRVLAEISDDRVMLVAAGVTYYLLLAFVPALSALVSVYGLFADPATVQEHAAMLQAL 137
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I +++ ++ + L A+ A + ++ G++AL ++N AY E R
Sbjct: 138 IPGGGMEIINEQLTRLASQGDTTLGFTFAISLAIALWSANAGMKALFEAMNVAYDEAEKR 197
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L SF + L A V ++ + +A+PLAL + + ++
Sbjct: 198 SFVTLTLTSFVFTLGAIVAAILFIGLVIALPLALDLL----GIGTDTKWLVSIASYAGIF 253
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + G+ ++ + P+ ++K I PG + T + VV ++LF+ Y+ F +Y+ Y L
Sbjct: 254 LLVSFGIAALYHWGPSRTRAKWRWITPGTVLTVVVIVVVSMLFSWYVANFGSYNATYGSL 313
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ + ++++ I+G E+NA M R
Sbjct: 314 GALIGFMTWIWISTTILIVGGEVNAEMEHQTAR 346
>gi|182416151|ref|YP_001821217.1| ribonuclease BN [Opitutus terrae PB90-1]
gi|177843365|gb|ACB77617.1| ribonuclease BN [Opitutus terrae PB90-1]
Length = 331
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 107/274 (39%), Gaps = 7/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
D++ +++ +A+ ++ ++ P + + G + V + +
Sbjct: 36 WRDVLLRTKNELAKDNLSIVAAGVAFYCFMAFVPMLGAIVSTYGLVADPVQVSEHAEALA 95
Query: 68 GAWPEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + +++ ++ + A +S L A Y S+ +AL LN AY E
Sbjct: 96 QVVPAEVMPLLREQMQRLTSAGEAAGIGALVSLLLAVYASAKATKALITGLNIAYDEEER 155
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + ++ L A + V+ + +P V + R
Sbjct: 156 RGFVRLQAVALALTLGAVLGAVLALGLVAVLPS----VAGHLGWSDAAGTAVNWLRWPLL 211
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +GL ++ F P+ + G + W+V ++ F+ Y+ T Y Y
Sbjct: 212 VGGFMLGLGVLYRFGPSRNPPQWRWLSAGAVVATGLWIVASLGFSFYVSTLGNYEKTYGS 271
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ L++LY+ G +LGAELNA M +
Sbjct: 272 LGALVVFLLWLYLTGYVVLLGAELNAEMERQTEK 305
>gi|196040219|ref|ZP_03107521.1| YihY family protein [Bacillus cereus NVH0597-99]
gi|196029074|gb|EDX67679.1| YihY family protein [Bacillus cereus NVH0597-99]
Length = 289
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKEIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|27383151|ref|NP_774680.1| hypothetical protein blr8040 [Bradyrhizobium japonicum USDA 110]
gi|27356325|dbj|BAC53305.1| blr8040 [Bradyrhizobium japonicum USDA 110]
Length = 392
Score = 161 bits (407), Expect = 1e-37, Method: Composition-based stats.
Identities = 60/277 (21%), Positives = 118/277 (42%), Gaps = 8/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
DI++ + + A+A+ ++ +LL++FP I + G + +D
Sbjct: 94 RGWKDILWRVYGNIGDHRVLALAAGMTYYSLLAIFPAIAALVAIYGLFSDPSSITKHLDD 153
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRV 122
V P + +++ +V + L + + ++ +++L +LN Y
Sbjct: 154 VSSFIPGGAVEVAREQLTRVATKSNRTLGFTFAIGLAISLWSANAAMKSLFDTLNIVYGE 213
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R ++ +S G+ + A +V V IP+ L YV L++ GR
Sbjct: 214 QEKRGFFKLNAMSLGFTVGAIAFVVAALGAVVVIPVVLHYV----GLSNATDLLVRIGRW 269
Query: 183 YATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A +AL L ++ F P+ + + I G + W+ + LF+ Y F T++
Sbjct: 270 PALFVALAFALACIYRFGPSRQAPRWTWITWGSAAAALLWLAASGLFSFYAANFGTFNAT 329
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ + +L++ + +LGAELNA M R
Sbjct: 330 YGSLGAVVGFMTWLWISAIVILLGAELNAEMEHQTAR 366
>gi|197105285|ref|YP_002130662.1| hypothetical protein PHZ_c1822 [Phenylobacterium zucineum HLK1]
gi|196478705|gb|ACG78233.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 367
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 112/277 (40%), Gaps = 10/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
DI+ A++ F ++ +A+ ++ LL++FP + L G +
Sbjct: 72 RGWKDILIRAVKEFADDQAPLVAAGVTFYTLLALFPALGALVALYGLFADVAQAREHLAA 131
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRV 122
+ P + + ++++++ A GL L + + ++ +A+ ++N AY
Sbjct: 132 LSAVLPADAVRFLGEQMVRISASNEGGLSLAFAGGLLLSIWSANGATKAMITAMNIAYDE 191
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS+ L S + L + + V A + ++
Sbjct: 192 DEKRSFVAKTLTSLAFTLGFLMFGLAALAVIAAPAAVEPFAGP------AAAAMMRWITW 245
Query: 183 YATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ AL +GL ++ F P+ + + I G I W+ + F+ Y+ F+ Y
Sbjct: 246 PILVAALGLGLALLYRFGPSRDRVRWRWISWGSAAALILWLAVSAAFSIYVANFADYEKT 305
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ L++LY+ +LGAELN+ + +
Sbjct: 306 YGSLGAVIGFLMWLYLSAQVVLLGAELNSEIEHQTVK 342
>gi|297198844|ref|ZP_06916241.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197711235|gb|EDY55269.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 354
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 107/274 (39%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + ++++ A+ ++ +LS+FP ++ +L G +G + ++
Sbjct: 47 RAWRAVLRRTAKELLDDELADRAAALTYYGVLSLFPALLVMVSLLGVVG-QRATDKILGN 105
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + D ++Q+ G L + LAA + +S V A + N Y +
Sbjct: 106 IGDLAPGPARDILRDAVVQLGDSGGTGSVLAILGLLAALWSASGYVAAFIRASNAVYDLP 165
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + + + L + + + V + + + +
Sbjct: 166 EGRPVWKLTPLRLALTVTLMLMLAVSALIVVFTGPLAERAGRAVGFGDAAIALWGVTKWP 225
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + + + ++ P + + I PG + + WV + F Y F +Y+ Y
Sbjct: 226 VLLLLVVVMIGLLYWAAPNVRGRGFRWISPGSVVATLVWVAASAGFAVYAANFGSYNKTY 285
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA + LV+L++ + +LG E +A +
Sbjct: 286 GTLAGAIVFLVWLWLTNLAILLGLEFDAELARER 319
>gi|256395761|ref|YP_003117325.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256361987|gb|ACU75484.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 365
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 108/274 (39%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ F +++ A+ ++ +L+VFP ++ ++ G +G +++D
Sbjct: 64 RSWLAVLRRTAGEFRDDELSDRAAALTYYGVLAVFPALLVVVSVLGLIG-PSATNSLLDN 122
Query: 66 VFGAWPEVIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + + + QV + L + A + +S V A + N Y +
Sbjct: 123 IQKLAPGSVRDLLRTAVTQVRSSRGAGGTLAVVGLAGALWSASGYVAAFIRASNVVYDMR 182
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + T + G LL L+ + + V L+ +
Sbjct: 183 EGRPVWKTTPLRVGLTLLMMALLLASAVIVVFTGPLAQRAGDLLGLGHTALVAWSIAKWP 242
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + + ++ P + + + PG + + W++ + F Y+ F++Y+ Y
Sbjct: 243 VLVVLVAFMIALLYWAAPNVRDRGFRWVSPGSLLAVVLWLILSAGFALYVANFASYNKTY 302
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+A ++ LV+L++ + +LG E +A +
Sbjct: 303 GTVAGVIVFLVWLWLSNLAILLGLEFDAELARER 336
>gi|312194341|ref|YP_004014402.1| ribonuclease BN [Frankia sp. EuI1c]
gi|311225677|gb|ADP78532.1| ribonuclease BN [Frankia sp. EuI1c]
Length = 360
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 106/272 (38%), Gaps = 4/272 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ + F E+ A+ ++ ++L++FP ++ +L G +G TV+D +
Sbjct: 40 WWAVLRRTVAEFNEDALSDRAAALTYYSILAIFPALLVLVSLLGVIG-QSATTTVLDNLQ 98
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P ++ + V G L + A + +S V A + N Y + E
Sbjct: 99 NLTPASARDVVSGAVDGVRGSAGTGSVLAIVGLAGALWSASGYVAAFIRAANAVYDIPEG 158
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + G + V + + + V + + +
Sbjct: 159 RPAWKIAPLRIGLTVALMVLAALSAVIVVFSGKVARQAGSALGIGQTAVDVWSYAKWPVL 218
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + ++ P + + + PG + W+V + F Y+ F +Y+ Y
Sbjct: 219 VVFVILMIAILYWAAPNVRHQGFRWLTPGTVLALAIWMVASAAFAFYVSNFGSYNKTYGA 278
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+A ++ LV+L++ + +LG E +A +
Sbjct: 279 VAGVIIFLVWLWLTNLAILLGLEFDAELARQR 310
>gi|332142226|ref|YP_004427964.1| putative ribonuclease protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|327552248|gb|AEA98966.1| putative ribonuclease protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 317
Score = 160 bits (405), Expect = 2e-37, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 115/273 (42%), Gaps = 8/273 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I+ +++ +A+ ++ LL++FP + L G + + Q + + +
Sbjct: 17 LKSWWSILKRIFSSVQKDNIPLIAAGVAFYCLLAIFPLLGATIALYGLMVSPQELQSHMT 76
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYR 121
+ P I +++ ++ L + + + + SS G AL + N Y
Sbjct: 77 FLVNVVPTDSRYIIEEQLTNLIEKSNSTLGWGFLFTLVLSLWSSSKGANALIKACNITYG 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R ++ L + +T+++ +P ++ ++ + + +
Sbjct: 137 ESEGRGFFKGILARVTCTVFMILTVIVALACITILPESIQWLSGNTVSAKEAMWVT---- 192
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ I L ++ + P + ++ + PG IF + WVV + F+ Y+ F +Y+
Sbjct: 193 WPVMLGLFNIALSALYRYAPHRREAQWRWVTPGSIFATVLWVVASYGFSIYLNEFGSYNK 252
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + I+ L++LY+ ++GAE+N+++
Sbjct: 253 TYGSVGGIIILLMWLYLSAYIILIGAEVNSAIE 285
>gi|119961246|ref|YP_949390.1| YihY family protein [Arthrobacter aurescens TC1]
gi|119948105|gb|ABM07016.1| YihY family protein [Arthrobacter aurescens TC1]
Length = 359
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 51/270 (18%), Positives = 109/270 (40%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
I + F ++ A+ ++ A+L++FP ++ +L G G + ++D+V
Sbjct: 40 IAKRTLREFTKDQCPDAAAGLTYYAVLALFPALLALVSLIGIFGDAGKTTGALLDIVQQF 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + I ++ A G + L A + +S A ++NR Y V E R +
Sbjct: 100 APGPGVDAMRQPIEELTQSNAAGFALILGILVALWSASGYTTAFSRAMNRVYEVDEGRGF 159
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R +++ V +++ + V V L + + ++
Sbjct: 160 VKLRGTMLAVTVVSVVGAALVAGMLVLSGPVAEAVGGAIGMSETFLTVWNIAKWPILIII 219
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ F P K + G + + + + ++ F Y+ FS Y+ Y LA
Sbjct: 220 VVAIIAVLYYFTPNVKQPKFRWMSMGSLIALVIFALASLGFGFYVANFSNYNKTYGALAG 279
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L++L++L + + GAE +A M
Sbjct: 280 VIIMLLWLWILNMSLLFGAEFDAEMERGRQ 309
>gi|301052124|ref|YP_003790335.1| putative ribonuclease BN [Bacillus anthracis CI]
gi|300374293|gb|ADK03197.1| probable ribonuclease BN [Bacillus cereus biovar anthracis str. CI]
Length = 289
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKVIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|88812854|ref|ZP_01128099.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88789924|gb|EAR21046.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 322
Score = 160 bits (404), Expect = 3e-37, Method: Composition-based stats.
Identities = 55/268 (20%), Positives = 108/268 (40%), Gaps = 8/268 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DI+ + A+ ++ A+L++FP + ++ G + Q V I V
Sbjct: 26 WRDILLRTKSEISNDHLSMAAAGVAFYAMLALFPALAAIISIWGLVSDPQQVMQQIQSVS 85
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVE 124
G P+ A I + +V + + S L A Y +S G++AL LN Y E
Sbjct: 86 GMLPDQTAAIIKSQATKVASASGGAVSLAALGSVLLAVYSASKGMKALIEGLNMVYDEEE 145
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L++ + + ++ + AIP L + + R
Sbjct: 146 KRGFIKLNLVALILTIGLVLVMIAALGMIAAIPALLGSL----GLGAVTKTAVIWLRWPL 201
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L ++ + P+ + + + G + + W+ G+ F+ Y F +Y+ Y
Sbjct: 202 LFVVAIASLALIYRYAPSRTQPRWRWVSVGAVVATLLWIAGSFAFSFYTRNFGSYNETYG 261
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
L +++ L +L++ +LGAELN+
Sbjct: 262 SLGAVIILLTWLWLSAFVVLLGAELNSE 289
>gi|332308360|ref|YP_004436211.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175689|gb|AEE24943.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 318
Score = 159 bits (403), Expect = 3e-37, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+DI+ ++ ++++ +A+ + LL++FP + ++ G + + + ++
Sbjct: 17 LVGWWDILRRTVKKMLDDNLSLIAAGVGFYFLLAIFPMLAAFVSVYGLVVSPDELQQHLN 76
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYR 121
+ G P + I +I ++ L S L A + +S G +A+ + N Y
Sbjct: 77 SLIGVVPAQGREIIQKQISNIINKSQAELSASVVFSTLFAVWSASKGAQAMVTASNITYD 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R ++ ++ +++ V++ + L + + ++
Sbjct: 137 QREKRGL----IMMLVMRVVLTLSAVLVLAGALLAIALLPILLNQIGLKEHSSFLVKLIT 192
Query: 182 IYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + L + + P +K + PG I ++WV+ +V F++Y+ F Y
Sbjct: 193 WPFLAIVFNLALASFYRYGPHRSSAKWRWVTPGSILASVTWVMFSVGFSYYLGQFGQYDK 252
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L S++ L++ Y+ +LGAE NA+M
Sbjct: 253 TYGSLGSVVVLLMWFYLTAFIILLGAEFNAAMEHQ 287
>gi|297204551|ref|ZP_06921948.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197710614|gb|EDY54648.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 353
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 110/269 (40%), Gaps = 4/269 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ ++ F ++ A+ ++ +L++FP ++ +L G + H V+D +
Sbjct: 54 ILKGTLKEFKRDELTDRAAALTYYGILALFPALLALISLLG-IAGHSATQKVLDNIQKLA 112
Query: 71 PEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P ++ + Q+ G + + + A + +S V A S N Y V E R
Sbjct: 113 PGAARDVLSSAVKQMQGNAGIGSIMAIVGLVLAVWSASGYVAAFIRSANAVYDVPEGRPV 172
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G ++ + VI + + V + L + + +L
Sbjct: 173 WKVLPVRVGVTVVLLILAVISALIVVFTGSLAQQLGTTLGIGDTFLTVWSIAKWPVLVLL 232
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ P AK + I PG + + W++ + F Y+ F++Y+ Y A
Sbjct: 233 VTTMIAILYWATPNAKVRGFRWITPGSLLALVIWMIVSAGFALYVANFASYNKTYGTFAG 292
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ LV+L++ + +LG E +A M
Sbjct: 293 VIIFLVWLWITNLAILLGLEFDAEMHRQR 321
>gi|327480116|gb|AEA83426.1| ribonuclease BN, putative [Pseudomonas stutzeri DSM 4166]
Length = 291
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 69/272 (25%), Positives = 125/272 (45%), Gaps = 1/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ ++ F +D AS ++ L ++FPF+VF L GFL F +
Sbjct: 12 FTLLKRTLKEFSSDDMSTYASALAYRGLFAMFPFLVFLIALLGFLDLQNFFDWLRMQAEL 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A P V + I I Q+ A GL + L A + +S G +L +LNRAY V E R
Sbjct: 72 ALPPVAMEQINPVIDQLQEQQA-GLLSFGILVALWTASIGFRSLMNALNRAYDVEEGRPT 130
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +++ Y +V L+ + + V P A+ ++ ++++ R +L
Sbjct: 131 WKLIILALAYTAGVAVLLLFTAGLMVIGPQAMEWLAGQVGMRELVVVLWTWLRWPVIVLM 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ P + + I PG + + W++ +V F Y+ F+ Y+ Y + +I
Sbjct: 191 LMLVVALLYYVAPDVEQEFRFITPGSVLAVLVWILASVAFGVYVQNFADYNATYGSIGAI 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ L++LY+ + GAELNA + K
Sbjct: 251 IVLLLYLYISAAVLLFGAELNAVIEHASVEGK 282
>gi|72160655|ref|YP_288312.1| ribonuclease BN [Thermobifida fusca YX]
gi|71914387|gb|AAZ54289.1| ribonuclease BN [Thermobifida fusca YX]
Length = 333
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 114/271 (42%), Gaps = 3/271 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + F E++ +A+ ++ A+LS+FP ++ +L G G T+ D +
Sbjct: 32 WWASLKRTVVEFKEDNLTDLAAGLTYYAVLSIFPALLVLVSLLGLAG-QSATDTISDQLS 90
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ + +T + + A A + +S A + +S V A + N Y + E
Sbjct: 91 AVAPDETVEIVTGVLTNLQANQATASLVGLLSLALAVWSASAYVAAFMRAANIVYDIREG 150
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ T + G LL + I + + +V F A + + +
Sbjct: 151 RPFWKTLPVRVGITLLLLTLVAISALAVILSGGVAQWVGNFIGAGPTAVTLWNIVKWPVL 210
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + + ++ P K + PG I + W+ + F Y+ F+ Y+ Y L
Sbjct: 211 VLLMMFMVSVLYWAAPNVKRPFRWVSPGGIVAVLIWLGASAAFAFYVANFANYNRTYGSL 270
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A+++ LV+L++ + +LG E NA +
Sbjct: 271 AAVVIFLVWLWISNIAILLGIEYNAEIERSR 301
>gi|229165407|ref|ZP_04293191.1| YihY [Bacillus cereus AH621]
gi|228618005|gb|EEK75046.1| YihY [Bacillus cereus AH621]
Length = 288
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EVYVPDDAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|172056670|ref|YP_001813130.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
gi|171989191|gb|ACB60113.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
Length = 302
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ + + A ++ LS+FP I+F ++ F Q T+ + P
Sbjct: 16 QRMSDHNITDYAGTLAYYWFLSIFPGIIFVISVLSFFDIDQ--QTLESQIRDLAPGGSVN 73
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
TD I Q + P GL ++ A+ A + +S GV+ L + N AY R + R I+
Sbjct: 74 TFTDVIFQAIKEPQGGLLSVGAILAIWSASKGVDRLITTANHAYGDFSPRGFVAARGIAL 133
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIWNGRIYATMLALFIGLIF 195
++ + ++++ + V ++Y+ F P +++ R + + L + L
Sbjct: 134 ILTIVLGIGMLLLIVLNVLGGPIISYLANFVIPIDMGQKILLTVLRYAISTVLLILILSI 193
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ P +PG +F I W + +V F Y+ FS Y+ Y L S++ L++L
Sbjct: 194 FYRVAPKRPITFKEAIPGAVFGVIVWQLLSVGFGFYVSNFSNYNQTYGSLGSVVIVLLWL 253
Query: 256 YMLGVFFILGAELNASMIIYYWRKKP 281
Y G+ +LG+ELNAS + + P
Sbjct: 254 YFTGLIILLGSELNASWERFMKKADP 279
>gi|284029889|ref|YP_003379820.1| ribonuclease BN [Kribbella flavida DSM 17836]
gi|283809182|gb|ADB31021.1| ribonuclease BN [Kribbella flavida DSM 17836]
Length = 346
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 116/268 (43%), Gaps = 11/268 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I+ A + + +A+ ++ LS+FP + G + + + ++ +
Sbjct: 56 WWRIVRRAWKEASTDQVPLLAAGVAFFGFLSLFPAVAAIVLGYGLVAEPSQMRSQVEELT 115
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAA---AYFSSNGVEALRISLNRAYRVVE 124
A P + ++ + A P +GL +A + +S GV L ++N AY E
Sbjct: 116 AAVPASARDILLQQVESLAAAPQQGLGIGLVIALATALWSASGGVGYLISAVNLAYDEEE 175
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + +L++ G L A V +++ + + L + +++ R+
Sbjct: 176 TRGFVKRKLLALGLTLGAIVFVLLAAGLLAVGALIDDS-------STVVRVLLQVARLAV 228
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + I L V+ P ++ + G + W++ ++ F+ Y+ TF Y+ Y
Sbjct: 229 AIILITIALAVVYRVAPDRDAPRMRWVSVGAAVATVIWLLASIGFSVYVSTFGNYAKTYG 288
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
LA++ L++L++ +LGAE+NA
Sbjct: 289 SLAAVAILLLWLWLTAYAILLGAEINAE 316
>gi|30260576|ref|NP_842953.1| ribonuclease BN, putative [Bacillus anthracis str. Ames]
gi|42779603|ref|NP_976850.1| ribonuclease BN, putative [Bacillus cereus ATCC 10987]
gi|47525680|ref|YP_017029.1| ribonuclease BN [Bacillus anthracis str. 'Ames Ancestor']
gi|49183423|ref|YP_026675.1| ribonuclease BN [Bacillus anthracis str. Sterne]
gi|49480098|ref|YP_034736.1| ribonuclease BN [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|52144837|ref|YP_081992.1| ribonuclease BN [Bacillus cereus E33L]
gi|65317837|ref|ZP_00390796.1| COG1295: Predicted membrane protein [Bacillus anthracis str. A2012]
gi|165870787|ref|ZP_02215440.1| YihY family protein [Bacillus anthracis str. A0488]
gi|167634706|ref|ZP_02393025.1| YihY family protein [Bacillus anthracis str. A0442]
gi|167641273|ref|ZP_02399526.1| YihY family protein [Bacillus anthracis str. A0193]
gi|170688965|ref|ZP_02880166.1| YihY family protein [Bacillus anthracis str. A0465]
gi|170707108|ref|ZP_02897564.1| YihY family protein [Bacillus anthracis str. A0389]
gi|177654535|ref|ZP_02936391.1| YihY family protein [Bacillus anthracis str. A0174]
gi|190567539|ref|ZP_03020452.1| YihY family protein [Bacillus anthracis Tsiankovskii-I]
gi|217958004|ref|YP_002336548.1| YihY family protein [Bacillus cereus AH187]
gi|222094204|ref|YP_002528261.1| ribonuclease bn [Bacillus cereus Q1]
gi|227813080|ref|YP_002813089.1| YihY family protein [Bacillus anthracis str. CDC 684]
gi|228913156|ref|ZP_04076795.1| YihY [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229089528|ref|ZP_04220797.1| YihY [Bacillus cereus Rock3-42]
gi|229137270|ref|ZP_04265886.1| YihY [Bacillus cereus BDRD-ST26]
gi|229194786|ref|ZP_04321574.1| YihY [Bacillus cereus m1293]
gi|229604696|ref|YP_002865023.1| YihY family protein [Bacillus anthracis str. A0248]
gi|254686797|ref|ZP_05150655.1| YihY family protein [Bacillus anthracis str. CNEVA-9066]
gi|254724872|ref|ZP_05186655.1| YihY family protein [Bacillus anthracis str. A1055]
gi|254738978|ref|ZP_05196680.1| YihY family protein [Bacillus anthracis str. Western North America
USA6153]
gi|254744565|ref|ZP_05202244.1| YihY family protein [Bacillus anthracis str. Kruger B]
gi|254756177|ref|ZP_05208206.1| YihY family protein [Bacillus anthracis str. Vollum]
gi|254761995|ref|ZP_05213844.1| YihY family protein [Bacillus anthracis str. Australia 94]
gi|300119033|ref|ZP_07056744.1| YihY family protein [Bacillus cereus SJ1]
gi|4584097|emb|CAB40586.1| yfkH [Bacillus cereus ATCC 10987]
gi|30253944|gb|AAP24439.1| YihY family protein [Bacillus anthracis str. Ames]
gi|42735519|gb|AAS39458.1| ribonuclease BN, putative [Bacillus cereus ATCC 10987]
gi|47500828|gb|AAT29504.1| YihY family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49177350|gb|AAT52726.1| ribonuclease BN, putative [Bacillus anthracis str. Sterne]
gi|49331654|gb|AAT62300.1| probable ribonuclease BN [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|51978306|gb|AAU19856.1| probable ribonuclease BN [Bacillus cereus E33L]
gi|164713621|gb|EDR19145.1| YihY family protein [Bacillus anthracis str. A0488]
gi|167510781|gb|EDR86174.1| YihY family protein [Bacillus anthracis str. A0193]
gi|167529780|gb|EDR92528.1| YihY family protein [Bacillus anthracis str. A0442]
gi|170127886|gb|EDS96757.1| YihY family protein [Bacillus anthracis str. A0389]
gi|170667066|gb|EDT17828.1| YihY family protein [Bacillus anthracis str. A0465]
gi|172080647|gb|EDT65730.1| YihY family protein [Bacillus anthracis str. A0174]
gi|190561326|gb|EDV15298.1| YihY family protein [Bacillus anthracis Tsiankovskii-I]
gi|217067694|gb|ACJ81944.1| YihY family protein [Bacillus cereus AH187]
gi|221238259|gb|ACM10969.1| probable ribonuclease BN [Bacillus cereus Q1]
gi|227003880|gb|ACP13623.1| YihY family protein [Bacillus anthracis str. CDC 684]
gi|228588697|gb|EEK46727.1| YihY [Bacillus cereus m1293]
gi|228646173|gb|EEL02391.1| YihY [Bacillus cereus BDRD-ST26]
gi|228693835|gb|EEL47529.1| YihY [Bacillus cereus Rock3-42]
gi|228846561|gb|EEM91574.1| YihY [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
gi|229269104|gb|ACQ50741.1| YihY family protein [Bacillus anthracis str. A0248]
gi|298723649|gb|EFI64380.1| YihY family protein [Bacillus cereus SJ1]
gi|324324508|gb|ADY19768.1| YihY family protein [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 289
Score = 159 bits (402), Expect = 4e-37, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|311113876|ref|YP_003985098.1| tRNA processing ribonuclease BN [Rothia dentocariosa ATCC 17931]
gi|310945370|gb|ADP41664.1| tRNA processing ribonuclease BN [Rothia dentocariosa ATCC 17931]
Length = 431
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 109/272 (40%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
I A F G +A+ ++ +LS FP ++ +L G G +++ +
Sbjct: 28 IFRRAGFSFGAHGGTDLAAALTYFTVLSAFPALLAILSLLGIFGQGEDSAKVILEFLQER 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ + + I Q+ G I L+A + +S V + +LN Y V E R
Sbjct: 88 APQQMYSILEGPIHQLTNGQGAGFALIIGILSALWSASGYVGSFGRALNNVYGVREGRPG 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGRIYATM 186
+ + + V +V+M +F+ L + + P + + ++ NGR +
Sbjct: 148 WFLKPYNVLITTGVIVLVVLMMLMFLLGASVLDWAAPYMPGVDIELIKVLWLNGRWVLIL 207
Query: 187 LALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + ++ P + KI PG + +G + FT Y FS Y+ Y +
Sbjct: 208 ILAVFLIAMLYTATPNVRRLKIRWTSPGAVIALFGMGLGGLGFTIYTNNFSKYNATYGLI 267
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ LVFL+++ + GA ++A
Sbjct: 268 GGVIVMLVFLWIMNNMLVFGAHVDAEFERMRQ 299
>gi|47567234|ref|ZP_00237948.1| ribonuclease BN, putative [Bacillus cereus G9241]
gi|228983665|ref|ZP_04143867.1| YihY [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
gi|47556077|gb|EAL14414.1| ribonuclease BN, putative [Bacillus cereus G9241]
gi|228776072|gb|EEM24436.1| YihY [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 289
Score = 159 bits (402), Expect = 5e-37, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|158316017|ref|YP_001508525.1| putative ribonuclease BN [Frankia sp. EAN1pec]
gi|158111422|gb|ABW13619.1| putative ribonuclease BN [Frankia sp. EAN1pec]
Length = 420
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 103/275 (37%), Gaps = 4/275 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ + F +D A+ ++ +L++FP + + Q +V++
Sbjct: 93 LRSWFWVLVRTVREFRRDDLPDRAAALTYYGVLAIFPA-LLVLVSLLGVVGRQATDSVLE 151
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA--YFSSNGVEALRISLNRAYRV 122
+ P + D + + P AA + +S + A + N Y +
Sbjct: 152 NLQELTPGSARDIVHDAVTGLRDAPGTSGLLAVLGLAAALWSASGYIAAFIRAANAIYDM 211
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + + +L V L + + V V + ++ + +
Sbjct: 212 PEGRPVWKVAPLRLAVTVLLMVLLAGSAVIVVFSGGLARQVGRMIGLDDAMITLWSVAKW 271
Query: 183 YATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + + ++ P A+ + + PG + + W+ + F Y+ F +Y+
Sbjct: 272 PVLVLFVVVMIALLYWSTPNARVRGFRWMTPGSLLAVLIWLAASAAFAFYVSNFGSYNKT 331
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y LA ++ LV+L++ + +LG E + +
Sbjct: 332 YGALAGVIVFLVWLWLSNLAILLGLEFDTEIARGR 366
>gi|331696161|ref|YP_004332400.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326950850|gb|AEA24547.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 350
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 115/275 (41%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + A ++ +A ++ A L++FP ++ + G + V +D +
Sbjct: 48 WWQVTRRAWAEAKADNVPILAGGVAFFAFLALFPALIAAITVYGLVADPAQVGDQVDRLA 107
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + D++ V + L +S LAA + +S G L + N AY E
Sbjct: 108 AILPAAARPIVADQLGAVSSAGTGALGVGLVVSLLAALWSASAGTMNLIRATNLAYDEEE 167
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + R + G L A V +++ + A+P V G L++ R
Sbjct: 168 TRGFLRLRGTALGLTLAAIVFVLLAVALVAAMPAVFEAV----GLGGAGLVVAQVVRWVL 223
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + + L V+ P K + G + + W+VG+++F+ Y+ F +Y+ Y
Sbjct: 224 LVVLVVVALAVVYRVAPDRDAPKFRWVSVGAVVATVLWLVGSIVFSVYVDNFGSYNKTYG 283
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
LA + L++LY+ +LGAE+NA R
Sbjct: 284 ALAGAVVLLLWLYLTSYIVLLGAEINAESERQTAR 318
>gi|229154172|ref|ZP_04282296.1| YihY [Bacillus cereus ATCC 4342]
gi|228629308|gb|EEK86011.1| YihY [Bacillus cereus ATCC 4342]
Length = 289
Score = 159 bits (401), Expect = 5e-37, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRKEVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|209544202|ref|YP_002276431.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
gi|209531879|gb|ACI51816.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
Length = 321
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 59/281 (20%), Positives = 120/281 (42%), Gaps = 8/281 (2%)
Query: 2 REYFCIVFD-IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
R ++ ++ + + A+ + A LS+FP I ++ G + V
Sbjct: 22 RPMLRQMWKPVLGRMARNLSSDQITLAAAGCAFYATLSLFPAISTLISIYGLMFDPDTVE 81
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLN 117
+DV+ P I + I ++A P L L + +S ++ ++N
Sbjct: 82 PQMDVLRHLLPPSAFTLIDERIHTLVAEPHSSLTLNLILSTTITLWSASAATRSIISAVN 141
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA---LGNLL 174
AY E R + L++ G L A V+ V VA+P+ + +V ++
Sbjct: 142 IAYDTRETRGFVQFHLMALGMTLCAICGAVLTLSVLVALPVLIDFVPARLGLAPPPWSVE 201
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ G +L + ++ F P + + ILPG + W+V ++ F++Y+
Sbjct: 202 LLVQTGGPALMLLFVLAACSLLYRFSPNRRIVHWICILPGSCTATLIWIVSSIGFSYYVS 261
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T ++Y+ Y L +++ +++ ++ +LGAELNA +
Sbjct: 262 TIASYNATYGPLGAVVATMMWFFVTAYVILLGAELNAGLEA 302
>gi|118476162|ref|YP_893313.1| ribonuclease BN [Bacillus thuringiensis str. Al Hakam]
gi|196045195|ref|ZP_03112427.1| YihY family protein [Bacillus cereus 03BB108]
gi|225862450|ref|YP_002747828.1| YihY family protein [Bacillus cereus 03BB102]
gi|229182794|ref|ZP_04310033.1| YihY [Bacillus cereus BGSC 6E1]
gi|118415387|gb|ABK83806.1| ribonuclease BN [Bacillus thuringiensis str. Al Hakam]
gi|196023779|gb|EDX62454.1| YihY family protein [Bacillus cereus 03BB108]
gi|225790204|gb|ACO30421.1| YihY family protein [Bacillus cereus 03BB102]
gi|228600674|gb|EEK58255.1| YihY [Bacillus cereus BGSC 6E1]
Length = 289
Score = 159 bits (401), Expect = 6e-37, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFIYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|228989594|ref|ZP_04149578.1| YihY [Bacillus pseudomycoides DSM 12442]
gi|228770131|gb|EEM18711.1| YihY [Bacillus pseudomycoides DSM 12442]
Length = 289
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V+ D + + +D +A+ ++ LL++FP +VF L GF+
Sbjct: 7 KARGNRVYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TED 64
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ ++ PE I + +V+ GL + L+ +F+SNGV A+ + NRAY
Sbjct: 65 VLSLLEAYVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSTLWFASNGVNAVMNAFNRAYD 124
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ TR +S L +V V V + A V K + + R
Sbjct: 125 VKETRSFIATRALSIVLTLAMIFMIVFALIVPVFGQVIGAAVFKALGLSESFSFVWSIIR 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ A+ L LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+
Sbjct: 185 LVASFLVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANT 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y GL I+ +++ Y+ +LG E+N + Y
Sbjct: 245 YGGLGGIIILMLWFYLTAWVILLGGEINGLLHFYR 279
>gi|229028258|ref|ZP_04184396.1| YihY [Bacillus cereus AH1271]
gi|228733064|gb|EEL83908.1| YihY [Bacillus cereus AH1271]
Length = 289
Score = 158 bits (400), Expect = 7e-37, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSIMRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|332284550|ref|YP_004416461.1| ribonuclease [Pusillimonas sp. T7-7]
gi|330428503|gb|AEC19837.1| ribonuclease [Pusillimonas sp. T7-7]
Length = 468
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 7/276 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVI 63
I A++ E+ +AS ++ + +LS+ P + L F +
Sbjct: 42 LRNFRKIARFALQRAAEKKLTQVASSLTFTTVLSIVPLLAVVLALFTAFPLFGDFQLALE 101
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + L A A GL L S + + N ++V
Sbjct: 102 DFLTRNLMPPSVSDNAMLYLNQFAAKASGLTAAGTLFLIVTSVMLFMTIDQAFNSIWQVE 161
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R L+ + + L V + + + R+ + L +I +
Sbjct: 162 RQRPLRQRMLVYWAIISLGPVLIGASLWATSVL------ARESLGDVNELPALIGFALSF 215
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
MLA +G + + +P K L G T I + + F +Y+ F +Y+ +Y
Sbjct: 216 VPMLATGLGFTALFVTVPNRKVLWKDALTGGFGTAIVLEIMRIGFAYYLTRFPSYTVIYG 275
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A++ L++LY+ + +LGA + + + R+
Sbjct: 276 AFATLPIFLLWLYLSWLVVLLGATVASILPDLRMRR 311
>gi|163938399|ref|YP_001643283.1| putative ribonuclease BN [Bacillus weihenstephanensis KBAB4]
gi|229056246|ref|ZP_04195667.1| YihY [Bacillus cereus AH603]
gi|163860596|gb|ABY41655.1| putative ribonuclease BN [Bacillus weihenstephanensis KBAB4]
gi|228721051|gb|EEL72589.1| YihY [Bacillus cereus AH603]
Length = 289
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 74/281 (26%), Positives = 129/281 (45%), Gaps = 7/281 (2%)
Query: 1 MREYF-----CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA 55
MR++ F D + + +D +A+ ++ LL++FP +VF L GF+
Sbjct: 1 MRKFLEKAKRNRTFSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDL 60
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+V++++ PE I + +V+ GL + L+ +F+SNGV A+ +
Sbjct: 61 Q--TESVLNLLEPYVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNA 118
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
NRAY V E RS+ TR +S + L +V V V + A V K +
Sbjct: 119 FNRAYDVTETRSFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSY 178
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ R+ A+ L F++ F P K K ++ G IF + W+V + F +Y+ F
Sbjct: 179 VWSITRLVASFFVLIALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKF 238
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ Y+ Y GL I+ +++ Y+ +LG E+N + Y
Sbjct: 239 ANYANTYGGLGGIIILMLWFYLTAWVILLGGEINGLLHHYR 279
>gi|111224904|ref|YP_715698.1| hypothetical protein FRAAL5539 [Frankia alni ACN14a]
gi|111152436|emb|CAJ64172.1| Putative membrane protein (partial) [Frankia alni ACN14a]
Length = 388
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 99/267 (37%), Gaps = 4/267 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
F ++ + F+++D A+ ++ A+L++FP + L ++D
Sbjct: 84 RSWFGVLRRTVREFMDDDLPDRAAALTYYAVLAIFPA-LLVLVSLVGLLGRSTTDRLLDN 142
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + + + + G + I A + +S + A + N Y +
Sbjct: 143 IEQLTPGAARDILHNAVNGLRDSAGSGGVVAIIGLAGALWSASGYIAAFIRAANAVYDMP 202
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + + V L + S + V + +
Sbjct: 203 EGRPVWKIAPLRLLITITLVVLLAVSSVIVVFSGALAEQAGTAIGLGHEAITAWSFAKWP 262
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + + ++ P + + PG + + W+V + F Y+ TF +Y+ Y
Sbjct: 263 VLVLIVTAVIALLYWSTPNVRPHGFRWLTPGSVLAVVIWLVASGAFAFYVATFGSYNKTY 322
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELN 269
LA ++ LV+L++ + +LG E +
Sbjct: 323 GTLAGVIVFLVWLWLSNLAILLGLEFD 349
>gi|170747781|ref|YP_001754041.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170654303|gb|ACB23358.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 406
Score = 158 bits (400), Expect = 8e-37, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 117/270 (43%), Gaps = 9/270 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI A E +A+ ++ LL++FP + + G + + + + G
Sbjct: 113 DIALRAYHDVGENRLSLIAAGVTFFTLLAIFPAVAALVSCYGLVADASTINDQLASLQGI 172
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + + D++ ++ L + + + ++ GV+ + +LN Y E R
Sbjct: 173 LPQGALEIVGDQVKRLNEQGNTTLGFSLLISIALSVWSANGGVKHVFDALNLVYNEREKR 232
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ + L+S + A + L++ + + V F LG + R +
Sbjct: 233 NFLVLNLVSLAFTAGALLFLLLAL-----AAVVVVPVVLDFVGLGADAWWLALLRWPVLL 287
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+A+ +GL ++ + P+ + + PG + W+V ++LF+ Y+ F +Y+ Y L
Sbjct: 288 VAVLLGLALLYRYGPSRDAPRWRWVTPGGALAALLWIVASLLFSWYVAHFGSYNKTYGSL 347
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + + ++++ + + GA++NA M
Sbjct: 348 GAAIGFMTWIWLSTMIVLTGAQVNAEMEHQ 377
>gi|228995781|ref|ZP_04155441.1| YihY [Bacillus mycoides Rock3-17]
gi|229003401|ref|ZP_04161222.1| YihY [Bacillus mycoides Rock1-4]
gi|228757849|gb|EEM07073.1| YihY [Bacillus mycoides Rock1-4]
gi|228763942|gb|EEM12829.1| YihY [Bacillus mycoides Rock3-17]
Length = 289
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V+ D + + +D +A+ ++ LL++FP +VF L GF+
Sbjct: 7 KARGNRVYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TED 64
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ ++ PE I + +V+ GL + L+ +F+SNGV A+ + NRAY
Sbjct: 65 VLSLLEAYVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSTLWFASNGVNAVMNAFNRAYD 124
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ TR +S L +V V V + A V K + + R
Sbjct: 125 VKETRSFIATRALSIVLTLAMIFMIVFALIVPVFGQVIGAAVFKALGLSESFSFVWSIIR 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ A+ L LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+
Sbjct: 185 LVASFLVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANT 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y GL I+ +++ Y+ +LG E+N + Y
Sbjct: 245 YGGLGGIIILMLWFYLTAWVILLGGEINGLLHFYR 279
>gi|89097736|ref|ZP_01170624.1| hypothetical protein B14911_15112 [Bacillus sp. NRRL B-14911]
gi|89087595|gb|EAR66708.1| hypothetical protein B14911_15112 [Bacillus sp. NRRL B-14911]
Length = 286
Score = 158 bits (399), Expect = 9e-37, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + ++ +A+ + +LS+FP ++ ++ +L I
Sbjct: 2 KKMIAYLKKLGKEIKDDRATGLAAEQAYYYMLSIFPILILLLSIVPYLNIDP--QKAISF 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P A + ++ ++ P+ GL T + + +SNG++A ++N+A+ V E
Sbjct: 60 LQTVMPSETAAVFEENVVNIVTQPSGGLLTFGIIGTLWSASNGMQAFIRAMNQAFDVEET 119
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ RLIS G L +L++ + V + L V+ F + ++ R
Sbjct: 120 RSFIKARLISIGLTLGLIFSLIVALVLPVFGNVILDLVQSFINIPDEMQILFSVLRWVVA 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ + L ++ P ++PG + + W + ++ + YI F+ YS Y L
Sbjct: 180 IIVIAAVLSVLYKLAPNKHYPFKHVIPGAVAATVIWQLISLGLSIYIGNFANYSGTYGSL 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ +++ Y+ G+ ++G E+NA
Sbjct: 240 GGVIVLMLWFYLTGLTLVVGGEINAIYHRER 270
>gi|27382587|ref|NP_774116.1| hypothetical protein blr7476 [Bradyrhizobium japonicum USDA 110]
gi|27355759|dbj|BAC52741.1| blr7476 [Bradyrhizobium japonicum USDA 110]
Length = 376
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 116/273 (42%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + + ++ A A + LL++FP + + G + + +
Sbjct: 81 DIFWRTYQRIDDDRLLATAGGVVFFGLLAIFPAVTALVSSYGLFADPSTISANLQTLATM 140
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE + + D++ +V++ L L A + ++ GV+++ +LN AY E R
Sbjct: 141 LPEGSFQIVEDQVARVVSKGNTTLGVTFLLGLLLAIWSANAGVKSIFDALNVAYEEREKR 200
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ +S + V L++M VA PLAL LI+ R
Sbjct: 201 SFIRLNSVSLAFTAGGIVALLLMVGAVVAFPLAL----DHLGLAPESKLIVALARWPLLF 256
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L + L ++ F P+ + + G + + W+ G+ L + Y+ F+ Y+ Y L
Sbjct: 257 LILLVALAILYRFAPSRDAPRWQWLSLGAVAAALLWIAGSALLSWYLSEFANYNATYGSL 316
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + +++++M + + GAELN+ + R
Sbjct: 317 GAAIGLMMWMWMSAIVIMFGAELNSEIERQTLR 349
>gi|229009893|ref|ZP_04167112.1| YihY [Bacillus mycoides DSM 2048]
gi|228751324|gb|EEM01131.1| YihY [Bacillus mycoides DSM 2048]
Length = 289
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/281 (26%), Positives = 128/281 (45%), Gaps = 7/281 (2%)
Query: 1 MREYF-----CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA 55
MR++ F D + + +D +A+ ++ LL++FP +VF L GF+
Sbjct: 1 MRKFLEKAKRNRTFSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPI 60
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
V+ ++ P+ I + +V+ GL + L+ +F+SNGV A+ +
Sbjct: 61 Q--TEDVLSLLEVYVPDDAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNA 118
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
NRAY V E RS+ TR +S + L +V V V + A V K +
Sbjct: 119 FNRAYDVTETRSFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSY 178
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ R+ A+ L F++ F P K K ++ G +F I W+V + F +Y+ F
Sbjct: 179 VWSITRLVASFFVLIALFSFLYTFAPDRKLKRREVVSGALFATIGWIVVSYSFAYYVDKF 238
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ Y+ Y GL I+ +++ Y+ G +LG E+N + Y
Sbjct: 239 ANYANTYGGLGGIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|229131406|ref|ZP_04260303.1| YihY [Bacillus cereus BDRD-ST196]
gi|228652052|gb|EEL07992.1| YihY [Bacillus cereus BDRD-ST196]
Length = 289
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
F D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTFSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L F++ F P K K ++ G IF + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLIALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTAWVILLGGEINGLLHHYR 279
>gi|152974229|ref|YP_001373746.1| putative ribonuclease BN [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152022981|gb|ABS20751.1| putative ribonuclease BN [Bacillus cytotoxicus NVH 391-98]
Length = 289
Score = 158 bits (399), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 2/275 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V+ D + + +D +A+ ++ LL++FP +VF L GF+
Sbjct: 7 KARGNRVYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFVITLLGFIDLQ--TEN 64
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ PE I + QV+ GL + L+ +F+SNGV A+ + NRAY
Sbjct: 65 VLNLLEPYVPEEAMNLIEVNVDQVINNQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYD 124
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +TR +S + L +V V V + A V K + + R
Sbjct: 125 VKETRSFIVTRALSIVFTLAMIFMIVFALIVPVFGQVIGAAVFKVLGLSESFSFVWSIIR 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ A+ L LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+
Sbjct: 185 LVASFLVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANT 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y GL I+ +++ Y+ +LG E+N + Y
Sbjct: 245 YGGLGGIIILMLWFYLTAWVILLGGEINGLLYFYR 279
>gi|229171254|ref|ZP_04298844.1| YihY [Bacillus cereus MM3]
gi|228612211|gb|EEK69443.1| YihY [Bacillus cereus MM3]
Length = 289
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G IF + W++ + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGAIFATVGWIMVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|269795024|ref|YP_003314479.1| hypothetical protein Sked_17180 [Sanguibacter keddieii DSM 10542]
gi|269097209|gb|ACZ21645.1| predicted membrane protein [Sanguibacter keddieii DSM 10542]
Length = 381
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 104/271 (38%), Gaps = 4/271 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
++ F + +A+ ++ A+L+ P ++ ++ G +G V V+ +V
Sbjct: 35 VLRSTARQFTRDQCLDLAAALTYYAVLASAPALLALVSILGLVGDGGALVEDVLGIVSSV 94
Query: 70 WPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + QV + + I A + +S V A +LNR Y + E R
Sbjct: 95 LPAETMATVEPLVDQVASQSSGAGLALVIGLAGALWSASGYVGAFGRALNRVYEIEEGRP 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R + L+ +V ++ V V L + + +L
Sbjct: 155 VWKLRPANLLITLVVAVGAALVVVALVLSGGVAQAVGDTIGLGSVALTVWSVAKWPVVLL 214
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ P + + G + + W V + F Y+ T +Y + Y L
Sbjct: 215 VVIGMVALLYHSTPNVRQPRFRWLSVGALVAILVWAVASAGFGVYVATLGSYGSTYGTLG 274
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ L++L++ + + GAEL++ +
Sbjct: 275 TVIVFLLWLWITNLALLFGAELDSELERGRE 305
>gi|162147146|ref|YP_001601607.1| ribonuclease protein [Gluconacetobacter diazotrophicus PAl 5]
gi|161785723|emb|CAP55294.1| putative ribonuclease protein [Gluconacetobacter diazotrophicus PAl
5]
Length = 321
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 59/281 (20%), Positives = 120/281 (42%), Gaps = 8/281 (2%)
Query: 2 REYFCIVFD-IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
R ++ ++ + + A+ + A LS+FP I ++ G + V
Sbjct: 22 RSMLRQMWKPVLGRMARNLSSDQITLAAAGCAFYATLSLFPAISTLISIYGLMFDPDTVE 81
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLN 117
+DV+ P I + I ++A P L L + +S ++ ++N
Sbjct: 82 PQMDVLRHLLPPSAFTLIDERIHTLVAEPHSSLTLNLILSTTITLWSASAATRSIISAVN 141
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA---LGNLL 174
AY E R + L++ G L A V+ V VA+P+ + +V ++
Sbjct: 142 IAYDTRETRGFVQFHLMALGMTLCAICGAVLTLSVLVALPVLIDFVPARLGLAPPPWSVE 201
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ G +L + ++ F P + + ILPG + W+V ++ F++Y+
Sbjct: 202 LLVQTGGPALMLLFVLAACSLLYRFSPNRRIVHWICILPGSCTATLIWIVSSIGFSYYVS 261
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T ++Y+ Y L +++ +++ ++ +LGAELNA +
Sbjct: 262 TIASYNATYGPLGAVVATMMWFFVTAYVILLGAELNAGLEA 302
>gi|220923045|ref|YP_002498347.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219947652|gb|ACL58044.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 347
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ ++ A A ++ ALL+VFP + +L G + + + ++ G
Sbjct: 53 DIVWRVFWSLPQDRVLATAGGVAFFALLAVFPGLATIVSLYGLVADPSVIYQHLSLLTGV 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + E+ ++ A L +S L A + +++GV AL +LN Y+ E R
Sbjct: 113 LPSGVLDLLASELTRITKQGAGTLSTTSVLSLLIAFWSANSGVSALFDALNVIYKEREKR 172
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + L + V +I + + VA+P+ L + + + R A +
Sbjct: 173 TLVRFYGTTLLFTLSSVVFALIATGMVVAMPIILNQI----GLRSSADAALRLVRWPALL 228
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL ++ + P+ + +K + G + WV + LF+ Y+ +F +Y+ Y L
Sbjct: 229 VVVSLGLSAIYRYGPSRREAKWRWVTWGSSVAALLWVCASALFSWYVASFDSYNRTYGSL 288
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + ++++ V +LGAELNA M R
Sbjct: 289 GAGVGFMTWIWLSVVIVLLGAELNAEMERQTAR 321
>gi|229015792|ref|ZP_04172770.1| YihY [Bacillus cereus AH1273]
gi|229022000|ref|ZP_04178557.1| YihY [Bacillus cereus AH1272]
gi|228739306|gb|EEL89745.1| YihY [Bacillus cereus AH1272]
gi|228745508|gb|EEL95532.1| YihY [Bacillus cereus AH1273]
Length = 289
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
F D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTFSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|167035062|ref|YP_001670293.1| ribonuclease BN [Pseudomonas putida GB-1]
gi|166861550|gb|ABY99957.1| ribonuclease BN [Pseudomonas putida GB-1]
Length = 319
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 126/273 (46%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R ++
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQIGMQEFIVTLWTILRWPVIII 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LLMVAVALIYYVMPDVKQKFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|228906214|ref|ZP_04070101.1| YihY [Bacillus thuringiensis IBL 200]
gi|228919337|ref|ZP_04082707.1| YihY [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228956886|ref|ZP_04118667.1| YihY [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228963518|ref|ZP_04124675.1| YihY [Bacillus thuringiensis serovar sotto str. T04001]
gi|228796212|gb|EEM43663.1| YihY [Bacillus thuringiensis serovar sotto str. T04001]
gi|228802729|gb|EEM49565.1| YihY [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228840444|gb|EEM85715.1| YihY [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228853370|gb|EEM98140.1| YihY [Bacillus thuringiensis IBL 200]
Length = 289
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EVYVPDDAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFITTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSFVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|300741768|ref|ZP_07071789.1| YihY family protein [Rothia dentocariosa M567]
gi|300380953|gb|EFJ77515.1| YihY family protein [Rothia dentocariosa M567]
Length = 431
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 110/272 (40%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGA 69
I A F G +A+ ++ +LS FP ++ +L G G +++ +
Sbjct: 28 IFRRAGFSFGAHGGTDLAAALTYFTVLSAFPALLAILSLLGIFGQGEDSAKVILEFLQER 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ + + I Q+ G I L+A + +S V + +LN Y V E R
Sbjct: 88 APQQMYSILEGPIHQLTNGQGAGFALIIGILSALWSASGYVGSFGRALNNVYGVREGRPA 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGRIYATM 186
++ + V +V+M +F+ L +V + P + + ++ NGR +
Sbjct: 148 WLLIPYNVFVTTGVIVLVVLMMLMFLLGASVLDWVAPYMPGVDIELIKVLWLNGRWVLIL 207
Query: 187 LALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + ++ P + KI PG + +G + FT Y FS Y+ Y +
Sbjct: 208 ILAVFLIAMLYTATPNVRRLKIRWTSPGAVIALFGMGLGGLGFTIYTNNFSKYNATYGLI 267
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ LVFL+++ + GA ++A
Sbjct: 268 GGVIVMLVFLWIMNNMLVFGAHVDAEFERMRQ 299
>gi|226950854|ref|YP_002805945.1| YihY family protein [Clostridium botulinum A2 str. Kyoto]
gi|226843946|gb|ACO86612.1| YihY family protein [Clostridium botulinum A2 str. Kyoto]
gi|322807727|emb|CBZ05302.1| ribonuclease BN [Clostridium botulinum H04402 065]
Length = 285
Score = 157 bits (397), Expect = 2e-36, Method: Composition-based stats.
Identities = 64/277 (23%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F I+ I F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLFKIIPKSIKKLANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--ED 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P + + I +++ L + S + + +S G A+ LNRAY
Sbjct: 61 LLLGLKEIMPSNTYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYD 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ ++++ L + LV+ F+ V + I R
Sbjct: 121 VKERRSFVKVQIMTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +
Sbjct: 181 YIIMIGVTIFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRL 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y + +++ LV+LY+ + I G E+NA ++ +
Sbjct: 241 YGSIGAVIVFLVWLYLTSIIVITGGEINALLVSSREK 277
>gi|254560152|ref|YP_003067247.1| hypothetical protein METDI1672 [Methylobacterium extorquens DM4]
gi|254267430|emb|CAX23269.1| conserved hypothetical protein; putative Ribonuclease BN domain
[Methylobacterium extorquens DM4]
Length = 347
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DI++ + + A A ++ ALL+VFP +V +L G + + + ++
Sbjct: 51 WRDILWRVVLSLQRDRVLATAGGVAFFALLAVFPALVTIVSLYGLFSDPKAIGQHLSLLA 110
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVE 124
G P + ++++++++ L T S L A + +++GV AL +LN YR E
Sbjct: 111 GVLPNGVLDLLSEQLVRIARQSTGALSTASLLSMIIAFWSANSGVSALFDALNVIYRERE 170
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS + +F + L V ++ + + V +P+ L + G + R A
Sbjct: 171 KRSLVGFYVTTFLFTLTGIVFVLASTGMVVILPIVLNRI----GLGGLADTALRILRWPA 226
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + + L + + P+ + +K + G + +SWV +VLF+ Y+ +F +Y+ +Y
Sbjct: 227 LLLLVSMSLSLTYRYGPSRREAKWRWVSWGSVAASLSWVCTSVLFSWYVASFDSYNRVYG 286
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L + + + ++++ V +LGAELNA M R
Sbjct: 287 SLGAGVGFMTWIWLSVVIVLLGAELNAEMERQTAR 321
>gi|115372638|ref|ZP_01459945.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310823830|ref|YP_003956188.1| ribonuclease bn family protein [Stigmatella aurantiaca DW4/3-1]
gi|115370359|gb|EAU69287.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309396902|gb|ADO74361.1| Ribonuclease BN family protein [Stigmatella aurantiaca DW4/3-1]
Length = 349
Score = 157 bits (396), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 1/274 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFV 59
++ + I+ F E+ A+ +S L S+FP + F LA +L A V
Sbjct: 4 LKLKHLSWREFGRRFIKEFQEDTATDCAAQLSYYFLFSLFPLLFFLVTLAAYLPFAPGTV 63
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + P I + + ++ P L T+ L A + +S GV+ALR +LN A
Sbjct: 64 EAMLQRIAPLVPGDALSLIDEHLRSLVNQPRPKLLTLGFLVALWSASRGVDALRKALNLA 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V E R + T+ ++ L+ ++ L + VF+ + + + L
Sbjct: 124 YDVPESRPVWKTQGVAMLMTLVGTLLLPLSFTVFLLGGRVGQWFAERLQLIDAFHLFWSW 183
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
R T + + L + LP K + I PG + + W+V FT Y+ F Y+
Sbjct: 184 LRWPFTASLVMLMLALCYYVLPDVKQRFKYITPGSVLGTVLWLVSTWGFTQYVDEFGNYN 243
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + ++ L +LY+ G+ FI+G E+NA +
Sbjct: 244 VTYGSIGGVVVLLTWLYISGLIFIVGGEVNAILE 277
>gi|291302773|ref|YP_003514051.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
gi|290571993|gb|ADD44958.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
Length = 301
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 57/271 (21%), Positives = 108/271 (39%), Gaps = 5/271 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ I+ F ++ A+ ++ +LS+FP ++ A+L G G + V P
Sbjct: 11 LKRTIKEFNADNLTDAAAALTYYGVLSIFPGLLVLASLMGLFGQSATTS--MKDVTAVAP 68
Query: 72 EVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +TD V A PA + + LAA + +S + A + N Y V E R +
Sbjct: 69 GPVRDILTDATTGVAAQPATAGVMAIVGLLAALWAASGYIGAFMRASNVVYDVPEGRPIW 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
T + + V LV + + V V + + + + ++ +
Sbjct: 129 KTLPLRLAVTICVGVLLVASALIVVLTGQLAGTVGELLGVGATAVTVWDIAKWPVLVVLV 188
Query: 190 FIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ P AK PG + W+V + F Y+ F++Y+ Y L I
Sbjct: 189 ALIFSILYWASPNAKVGGPLRQAPGGLVAVGLWLVASAGFAFYVANFASYNKTYGTLGGI 248
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++L++ + + GAELNA + K
Sbjct: 249 IVFFIWLWVSNLAILFGAELNAELERGRAIK 279
>gi|170723022|ref|YP_001750710.1| ribonuclease BN [Pseudomonas putida W619]
gi|169761025|gb|ACA74341.1| ribonuclease BN [Pseudomonas putida W619]
Length = 317
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 126/273 (46%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I+ ++ F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 11 LHRILVRTVKEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRMQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R A ++
Sbjct: 130 VWKRIPLSIIYTVGIAGMLLAAAALMVLGPQVMEWIAAQIGMQEVIVTVWTILRWPAIII 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ +P K K I PG + + W++ ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LMMVAVAVIYYVMPDVKQKFRFITPGSVLAVVVWIIASLAFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|148381344|ref|YP_001255885.1| YihY family protein [Clostridium botulinum A str. ATCC 3502]
gi|153933068|ref|YP_001385721.1| YihY family protein [Clostridium botulinum A str. ATCC 19397]
gi|153935062|ref|YP_001389128.1| YihY family protein [Clostridium botulinum A str. Hall]
gi|148290828|emb|CAL84963.1| putative membrane-associated ribonuclease [Clostridium botulinum A
str. ATCC 3502]
gi|152929112|gb|ABS34612.1| YihY family protein [Clostridium botulinum A str. ATCC 19397]
gi|152930976|gb|ABS36475.1| YihY family protein [Clostridium botulinum A str. Hall]
Length = 285
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 127/277 (45%), Gaps = 2/277 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I+ I F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLSKIIPKSIKKLANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--ED 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P + + I +++ L + S + + +S G A+ LNRAY
Sbjct: 61 LLLGLKEIMPSNTYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYD 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ + ++ L + LV+ F+ V + I R
Sbjct: 121 VKERRSFVKVQTMTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +
Sbjct: 181 YIIMIGVTIFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRL 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y + +++ LV+LY+ + I G E+NA ++ +
Sbjct: 241 YGSIGAVIVFLVWLYLTSIIVITGGEINALLVSSREK 277
>gi|170741936|ref|YP_001770591.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168196210|gb|ACA18157.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 348
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ ++ A A ++ ALL+VFP + +L G + + + ++ G
Sbjct: 53 DILWRVAWSVPQDRVLATAGGVAFFALLAVFPGLALIVSLYGLVADPGAIYKHLSLLTGL 112
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + + E+ +V L +S L A + +++GV AL +LN Y+ E R
Sbjct: 113 LPQAVLDLLAAELSRVAGKSTGALGAASGVSLLVAFWSANSGVSALFDALNVIYKEREKR 172
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+F + L + ++ + + VA+P+ L V + R A +
Sbjct: 173 PLLHFYATTFLFTLTGVLFALVATGMVVALPVVLNQVGFQ---SYASDAALRLLRWPALL 229
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +GL ++ + P+ +K + G + WV + LF+ Y+ F +Y+ MY L
Sbjct: 230 VLVSLGLAAIYRYGPSRHEAKWRWVTWGSGIAALLWVCASALFSWYVARFDSYNRMYGSL 289
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + + +++ V +LGAELNA M R
Sbjct: 290 GAGVGFMTWIWFSIVIVLLGAELNAEMERQTVR 322
>gi|300114541|ref|YP_003761116.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540478|gb|ADJ28795.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 328
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 119/272 (43%), Gaps = 8/272 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DI Y + +++ +A+ ++ ALL++FP +V ++ G + V D +
Sbjct: 26 WRDIAYRIKDSLNDDNISIVAAGVAFYALLAIFPALVAMVSIYGIIADPADVQRQFDALS 85
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVE 124
G P +++++ ++ + + L + A + ++ G +A I+LN Y E
Sbjct: 86 GILPTEAQVLLSEQLRRITSQASTALSVGVGAGVILALWSATRGTKAFMIALNIVYGEKE 145
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + I+ L A V ++ + V +P+ L+Y+ ++
Sbjct: 146 KRGFLKLNAIALILTLGAIVLAILALGMIVVLPILLSYLD----LPEIFQVLASLLPWLL 201
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+GL ++ + P+ +++ + G + + W+ G+ LF+ Y+ F+ Y+ Y
Sbjct: 202 LAFTFILGLAVLYRYGPSRSEARWRWVSWGAVAATVLWIAGSALFSFYVANFAQYNKTYG 261
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++ L++ ++ +L AE NA M
Sbjct: 262 SVGALIILLMWFFVTAYIILLAAEFNAEMEHQ 293
>gi|295400591|ref|ZP_06810569.1| ribonuclease BN [Geobacillus thermoglucosidasius C56-YS93]
gi|294977494|gb|EFG53094.1| ribonuclease BN [Geobacillus thermoglucosidasius C56-YS93]
Length = 275
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 66/272 (24%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I + F E++ +++ ++ LLS+FPF++F L +L ++ V+
Sbjct: 5 LTFIREMARRFQEDEIPRLSAELAYYFLLSLFPFLIFLITLLAYLPIPH--EDLLSVIRQ 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ + + +V+ L ++S + A + +SNG+ A+ + NRAY VVE R +
Sbjct: 63 YAPKEAIHLVEANVHRVMDEQNGRLLSLSIIGAIWSASNGMNAIVRAFNRAYDVVENRPF 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R +S L V +++ + V + ++ F L I R + L
Sbjct: 123 LVARGMSVLLTLGMIVVIIVALVLPVFGKMIGLFLFSAFGFSATFLTIWNAMRWVISSLI 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF ++ F P K + +++ G IF I W++ ++ F++Y+ F+ Y+ MY L +
Sbjct: 183 LFAVFTALYYFAPNKKLRCANVVRGAIFATIGWIITSLAFSYYVNHFAHYAAMYGSLGGM 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +V+ Y+ G+ +LG E+NA +K
Sbjct: 243 IILMVWFYLSGMIIVLGGEMNAIFDCEREGRK 274
>gi|312112319|ref|YP_003990635.1| ribonuclease BN [Geobacillus sp. Y4.1MC1]
gi|311217420|gb|ADP76024.1| ribonuclease BN [Geobacillus sp. Y4.1MC1]
Length = 275
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I + F E++ +++ ++ LLS+FPF++F L +L ++ V+
Sbjct: 5 LTFIREMARRFQEDEIPRLSAELAYYFLLSLFPFLIFLITLLAYLPIPH--EDLLSVIRQ 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ + + +V+ L ++S + A + +SNG+ A+ + NRAY VVE R +
Sbjct: 63 YAPKEAIHLVEANVHRVMDEQNGRLLSLSIIGAIWSASNGMNAIVRAFNRAYDVVENRPF 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R +S + V +++ + V + ++ F L I R + L
Sbjct: 123 LVARGMSVLLTIGMIVVIIVALVLPVFGKMIGLFLFSAFGFSATFLTIWNAMRWVISSLI 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF ++ F P K + +++ G IF I W++ ++ F++Y+ F+ Y+ MY L +
Sbjct: 183 LFAVFTALYYFAPNKKLRCANVVRGAIFATIGWIITSLAFSYYVNHFAHYAAMYGSLGGM 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +V+ Y+ G+ +LG E+NA +K
Sbjct: 243 IILMVWFYLSGMIIVLGGEMNAIFDCEREGRK 274
>gi|269838968|ref|YP_003323660.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
gi|269790698|gb|ACZ42838.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
Length = 363
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 117/273 (42%), Gaps = 5/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D + ++ E+ A H++ S L +VFPF+VF +L G A + V ++
Sbjct: 29 LVDFVKQVLKEAQEDHLSVFAGHLTYSGLFAVFPFMVFLLSLLGIFRAEELVNELLSRAS 88
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF----TISALAAAYFSSNGVEALRISLNRAYRVV 123
A P I I Q+ A G F +S L A + S ++ ++N Y V
Sbjct: 89 TAMPREAVDLIGGPIRQIAQSKATGAFGLSALVSILLALWGVSGAFRSVMEAMNVMYEVK 148
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-I 182
E R ++ LIS L A+V ++ + V + + LG + W
Sbjct: 149 EGRPFWKRYLISILLSLGAAVLIIAALVLVVFGADIATAIARASAGLGPVFRWTWIILQW 208
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + ++ F P + + I PG + W+V ++LF+ Y+ F +Y+ Y
Sbjct: 209 PVLVGFVLLAFALIYYFAPDVEQQFRFITPGSLVAVALWLVFSLLFSLYVNNFGSYNKTY 268
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA ++ ++++Y +LG E+N + +
Sbjct: 269 GALAGVIILMLYMYYSAYILLLGTEINQVIEEH 301
>gi|229159554|ref|ZP_04287568.1| YihY [Bacillus cereus R309803]
gi|228623856|gb|EEK80668.1| YihY [Bacillus cereus R309803]
Length = 287
Score = 156 bits (395), Expect = 3e-36, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMYLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|297583355|ref|YP_003699135.1| ribonuclease BN [Bacillus selenitireducens MLS10]
gi|297141812|gb|ADH98569.1| ribonuclease BN [Bacillus selenitireducens MLS10]
Length = 290
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 57/276 (20%), Positives = 123/276 (44%), Gaps = 2/276 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V + F +++ +A+ + +LS+FP ++ ++ + +
Sbjct: 4 KAIARSVIGFFKSLGQEFTKDNVPLLAAAQAYYYMLSLFPMLILILSIIPYFDLDPNI-- 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+++++ P IA I +I+ ++ GL T LA + +SNG+ + N AY
Sbjct: 62 VVELMYQFIPGEIASMIEGQIVNLVTEQRGGLLTFGILATIWSASNGMNTFIKAQNEAYN 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R ++ RL+S + L++ + V ++++ F L + R
Sbjct: 122 VKVQRPFWKARLVSIALTFGLILALIVALILPVMGDAIISFISSFGILTAELEELFRLLR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L + ++ P K LPG +F ++W + F+ YI F+ +S
Sbjct: 182 WVVSISLLAMIFAALYYLAPNTKIPFRYALPGALFATLAWQLTGFGFSIYISNFANFSQT 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y L I+ +++L+++G+ ++GAE+NA + +
Sbjct: 242 YGSLGGIIVLMLWLFLIGIVLVVGAEINAVLYRKHR 277
>gi|315503112|ref|YP_004081999.1| ribonuclease bn [Micromonospora sp. L5]
gi|315409731|gb|ADU07848.1| ribonuclease BN [Micromonospora sp. L5]
Length = 340
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 100/283 (35%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD-IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+R+ + ++ + + FV ++ A+ ++ +L++FP + L G +
Sbjct: 21 IRQLNWRTWRGVLVRSGKGFVTDNCADWAAALTYYGVLALFPSTIVVVALVGLVSDGPRT 80
Query: 60 PTVIDVVFGAWPEVIA---KPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRI 114
+ + + V+ L + L A + +S + A
Sbjct: 81 VDTVIDLAREIGAGSVVGNDAFVGVVRNVVEQQGSAKVLLSFGLLGALWSASGFIGAFTR 140
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ N Y V E R +Y R + G + V L +++ + V A
Sbjct: 141 ASNAIYGVREGRPFYRLRPLQIGMAAVTIVLLAVVATGLIVSGPVTDAVGDLLHAGAVAR 200
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIV 233
+ + L + P + + PG ++WV+ + F Y+
Sbjct: 201 TTWSVAKWPLLAVVAMTLLSLLFWIAPNVRQPRFRWLTPGGALALVAWVLASFGFGLYVA 260
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
F +Y Y L +++ LV+LY+ +LG ++NA +
Sbjct: 261 NFGSYDVTYGSLGAVIAFLVWLYLSNCALMLGVQVNAELQRGR 303
>gi|314936062|ref|ZP_07843411.1| YihY family protein [Staphylococcus hominis subsp. hominis C80]
gi|313655879|gb|EFS19622.1| YihY family protein [Staphylococcus hominis subsp. hominis C80]
Length = 402
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L + D+V
Sbjct: 66 NFLSYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDP--QQIKDLVSQN 123
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A +T + + + L ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 124 APAETADVVTKIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPI 183
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ ++ L I + ++ + I RI ++ +
Sbjct: 184 VLKLLSILFTIVMAIVLAIALTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVI 243
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++ P K+K S+ PG IFT I W++G+ F Y+ F YS Y LA I+
Sbjct: 244 IILFLTLYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGII 303
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+++Y+ I+GAE+NA + + K
Sbjct: 304 ILLLWIYITCFIIIIGAEINAVIHQRHVIK 333
>gi|229074335|ref|ZP_04207373.1| YihY [Bacillus cereus Rock4-18]
gi|229095110|ref|ZP_04226105.1| YihY [Bacillus cereus Rock3-29]
gi|229101212|ref|ZP_04231976.1| YihY [Bacillus cereus Rock3-28]
gi|229114064|ref|ZP_04243489.1| YihY [Bacillus cereus Rock1-3]
gi|228669334|gb|EEL24751.1| YihY [Bacillus cereus Rock1-3]
gi|228682180|gb|EEL36293.1| YihY [Bacillus cereus Rock3-28]
gi|228688295|gb|EEL42178.1| YihY [Bacillus cereus Rock3-29]
gi|228708777|gb|EEL60912.1| YihY [Bacillus cereus Rock4-18]
Length = 288
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMYLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G IF + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGAIFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|255327084|ref|ZP_05368160.1| tRNA processing ribonuclease BN [Rothia mucilaginosa ATCC 25296]
gi|255296301|gb|EET75642.1| tRNA processing ribonuclease BN [Rothia mucilaginosa ATCC 25296]
Length = 463
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 6/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ I+ AI F G MA+ ++ +LS+FP ++ +L G G + ++ +
Sbjct: 49 ILYILRRAIYKFGANGGTDMAAALTYFTVLSIFPALLAIVSLLGVFGHGEESAAVILAFL 108
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + D I Q+ GL L+A + +S + +LN Y V E
Sbjct: 109 KDNAPAQMYAILEDPIKQITGDHGAGLVLLTGILSALWSASGYTGSFGRALNTVYNVREG 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRI 182
R +I + ++ + + +V+M + + L V ++ P + + LI NGR
Sbjct: 169 RPGWILKPLNVFVTTVLIILVVLMMLMMLLGVTVLDMVGQYVPETVDMELIKLIWLNGRW 228
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + ++ P + K + PG +G FT Y FS Y+
Sbjct: 229 ILILFMAIGLITLLYAATPNVRRFKQWKLSPGAALALFGMGLGGFGFTLYANNFSKYNAT 288
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + ++ L+F++++ + GA L+A +++
Sbjct: 289 YGLIGGVIVMLLFIWIMNNMLLFGAHLDAEIMLMRQ 324
>gi|30018660|ref|NP_830291.1| ribonuclease BN [Bacillus cereus ATCC 14579]
gi|75762510|ref|ZP_00742370.1| Ribonuclease BN [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|206967706|ref|ZP_03228662.1| YihY family protein [Bacillus cereus AH1134]
gi|218234197|ref|YP_002365252.1| YihY family protein [Bacillus cereus B4264]
gi|218895526|ref|YP_002443937.1| YihY family protein [Bacillus cereus G9842]
gi|228899127|ref|ZP_04063399.1| YihY [Bacillus thuringiensis IBL 4222]
gi|228937697|ref|ZP_04100333.1| YihY [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228950960|ref|ZP_04113081.1| YihY [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228970585|ref|ZP_04131235.1| YihY [Bacillus thuringiensis serovar thuringiensis str. T01001]
gi|228977155|ref|ZP_04137556.1| YihY [Bacillus thuringiensis Bt407]
gi|229042309|ref|ZP_04190060.1| YihY [Bacillus cereus AH676]
gi|229068157|ref|ZP_04201464.1| YihY [Bacillus cereus F65185]
gi|229077762|ref|ZP_04210390.1| YihY [Bacillus cereus Rock4-2]
gi|229108075|ref|ZP_04237700.1| YihY [Bacillus cereus Rock1-15]
gi|229125902|ref|ZP_04254927.1| YihY [Bacillus cereus BDRD-Cer4]
gi|229143195|ref|ZP_04271627.1| YihY [Bacillus cereus BDRD-ST24]
gi|229148807|ref|ZP_04277055.1| YihY [Bacillus cereus m1550]
gi|229176994|ref|ZP_04304389.1| YihY [Bacillus cereus 172560W]
gi|229188674|ref|ZP_04315713.1| YihY [Bacillus cereus ATCC 10876]
gi|296501234|ref|YP_003662934.1| ribonuclease BN [Bacillus thuringiensis BMB171]
gi|29894201|gb|AAP07492.1| Ribonuclease BN [Bacillus cereus ATCC 14579]
gi|74490006|gb|EAO53362.1| Ribonuclease BN [Bacillus thuringiensis serovar israelensis ATCC
35646]
gi|206736626|gb|EDZ53773.1| YihY family protein [Bacillus cereus AH1134]
gi|218162154|gb|ACK62146.1| YihY family protein [Bacillus cereus B4264]
gi|218544049|gb|ACK96443.1| YihY family protein [Bacillus cereus G9842]
gi|228594863|gb|EEK52643.1| YihY [Bacillus cereus ATCC 10876]
gi|228606469|gb|EEK63895.1| YihY [Bacillus cereus 172560W]
gi|228634601|gb|EEK91182.1| YihY [Bacillus cereus m1550]
gi|228640276|gb|EEK96674.1| YihY [Bacillus cereus BDRD-ST24]
gi|228657560|gb|EEL13373.1| YihY [Bacillus cereus BDRD-Cer4]
gi|228675350|gb|EEL30569.1| YihY [Bacillus cereus Rock1-15]
gi|228705553|gb|EEL57911.1| YihY [Bacillus cereus Rock4-2]
gi|228714971|gb|EEL66839.1| YihY [Bacillus cereus F65185]
gi|228727029|gb|EEL78235.1| YihY [Bacillus cereus AH676]
gi|228782603|gb|EEM30780.1| YihY [Bacillus thuringiensis Bt407]
gi|228789172|gb|EEM37101.1| YihY [Bacillus thuringiensis serovar thuringiensis str. T01001]
gi|228808687|gb|EEM55185.1| YihY [Bacillus thuringiensis serovar kurstaki str. T03a001]
gi|228821984|gb|EEM67976.1| YihY [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228860568|gb|EEN04956.1| YihY [Bacillus thuringiensis IBL 4222]
gi|296322286|gb|ADH05214.1| ribonuclease BN [Bacillus thuringiensis BMB171]
gi|326938192|gb|AEA14088.1| ribonuclease BN [Bacillus thuringiensis serovar chinensis CT-43]
Length = 288
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ V+ ++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIPIQ--TEDVLSLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EVYVPDDAMNLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFITTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKALGLSDSFSFVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G +F + W+V + F +Y+ F+ Y+ Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGALFATVGWIVVSYSFAYYVDKFANYANTYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|239825980|ref|YP_002948604.1| ribonuclease BN [Geobacillus sp. WCH70]
gi|239806273|gb|ACS23338.1| ribonuclease BN [Geobacillus sp. WCH70]
Length = 277
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I + + F +++ +++ ++ LLS+FPF++F L +L ++ ++
Sbjct: 5 LTFIREMVRRFQKDEIPRLSAELAYYFLLSLFPFLIFLFTLLAYLPIPH--EDILSIIRQ 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ + I +V+ L + S +AA + +SNG+ A+ + NRAY V E R +
Sbjct: 63 YAPKEALHLVEANIRRVMDDQNWKLLSFSIIAAIWSASNGMNAIVRAFNRAYDVEENRPF 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I R +S + +++ F+ V ++ F L I R +
Sbjct: 123 FIARGMSVLLTIGMIFVIIVALFLPVFGKTIGLFLFSAFGFSETFLTIWNALRWVISSFI 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF+ ++ F P K + +I+ G IF + W++ ++ F++Y+ F+ Y+ MY L +
Sbjct: 183 LFVVFTALYYFAPNKKLRCANIVRGAIFATVGWIMTSLAFSYYVNNFANYTAMYGSLGGM 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +V+ Y+ G+ +LG E+NA +K
Sbjct: 243 IILMVWFYLSGMIIVLGGEMNAIFDCEREGRK 274
>gi|254465241|ref|ZP_05078652.1| ribonuclease BN [Rhodobacterales bacterium Y4I]
gi|206686149|gb|EDZ46631.1| ribonuclease BN [Rhodobacterales bacterium Y4I]
Length = 315
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 113/270 (41%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + + +A+ ++ L+++FP I + G + + I + G
Sbjct: 20 DIALRVKDEIAADHVGLIAAGVAFYGLMALFPAITALLAIGGLMVEPAQIVDQISQLEGV 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + + I + QV GL L A Y +S G+ +L +N AY E R
Sbjct: 80 VPDEVMEIIIGQATQVAGSREGGLGLAAVAGILIALYSASKGMNSLIEGMNVAYDEEEKR 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+++ ++ L L++ +A+P +A V + + +
Sbjct: 140 GFFMKTFVTLVLTLFLIAGLLMGLLAALAVPSVIALVDA----GPVIEALGTLLAWGVLL 195
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ GL ++ + P+ K +++ PG + W+ G+ F Y+ F +Y+ + L
Sbjct: 196 VMTMAGLAVLYRYGPSRDKPELLWTSPGAAAACVLWLAGSAGFAFYVGNFGSYNESFGAL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
A ++ L++L++ +LGAE+NA +
Sbjct: 256 AGVVVLLMWLWISAFIVLLGAEINAEVEAQ 285
>gi|187776658|ref|ZP_02993131.1| hypothetical protein CLOSPO_00173 [Clostridium sporogenes ATCC
15579]
gi|187775317|gb|EDU39119.1| hypothetical protein CLOSPO_00173 [Clostridium sporogenes ATCC
15579]
Length = 285
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 130/277 (46%), Gaps = 2/277 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F I+ I + F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLFKIIPKGIKELTNRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--ED 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P + + I +++ L + S + + +S G A+ LN+AY
Sbjct: 61 LLLGLKEIIPSNAYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNKAYD 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ ++++ L + LV+ F+ V + I R
Sbjct: 121 VKERRSFVKVQIMTIFCTLGMAFVLVMSIFLLVFGRTIGRTLVYKLGFSWEFNRIWNLIR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +
Sbjct: 181 YTIMIGVTIFILAALYYYTPSKRLRWRDVLPGSIFATIAWIIASMGFSFYVDNFNNYSRL 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y + +++ LV+LY+ + I G E+NA ++ +
Sbjct: 241 YGSIGAVIVFLVWLYLTSIIVITGGEINALLVSSREK 277
>gi|148273269|ref|YP_001222830.1| hypothetical protein CMM_2087 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831199|emb|CAN02152.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 395
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 114/268 (42%), Gaps = 3/268 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWP 71
A+ F++ G MA+ ++ + LS+ P V +L G +G V V+ V+
Sbjct: 40 RRAVYGFMKHRGIDMAASLTFYSTLSLVPAAVAVLSLIGVVGDTRAGVEGVLGVLTAVLG 99
Query: 72 EVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ I D + Q+ P G+ FT+S L A + S+ V A ++NR E R
Sbjct: 100 DSAVDVIRDPVEQLADGPRSGIAFTVSFLGALWTSAAYVTAFGRAMNRVQETEEGRPLVK 159
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R + G + V V+M + + + + L++ + L
Sbjct: 160 YRALMLGVTVALLVVSVVMVGMLLLTDDGARALGQQLGLGDTTLVVWAIVKWPLLAALLT 219
Query: 191 IGLIFVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ P + + + +L G + ++W +G F Y+ T +TY + Y L +++
Sbjct: 220 GIIGVLYAATPNLRRRRVDLLTWGSLVAIVAWGLGTAGFVWYVTTIATYESTYGVLGAVI 279
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
L++LY+ + +LG EL+ +I
Sbjct: 280 VLLLWLYIGNLSLVLGGELDVEIIRARQ 307
>gi|163850547|ref|YP_001638590.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218529263|ref|YP_002420079.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|163662152|gb|ABY29519.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218521566|gb|ACK82151.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 347
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 130/275 (47%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DI++ + + A A ++ ALL+VFP + +L G + + ++
Sbjct: 51 WRDILWRVVLSLQRDRVLATAGGVAFFALLAVFPALATIVSLYGLFSDPTAIGQHLSLLA 110
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVE 124
G P + ++++++++ L T S L A + +++GV AL +LN YR E
Sbjct: 111 GVLPNGVLDLLSEQLVRIARQSTGALSTASLLSMIIAFWSANSGVSALFDALNVIYRERE 170
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS + +F + L V ++ + + V +P+ L+ + G + R A
Sbjct: 171 KRSLVGFYVTTFLFTLTGIVFVLASTGMVVILPIVLSRI----GLGGLADTALRILRWPA 226
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + + L + + P+ + +K + G + +SWV +VLF+ Y+ +F +Y+ +Y
Sbjct: 227 LLLLVSLSLSLTYRYGPSRREAKWRWVSWGSVAASLSWVCTSVLFSWYVASFDSYNRVYG 286
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L + + + ++++ V +LGAELNA M R
Sbjct: 287 SLGAGVGFMTWIWLSVVIVLLGAELNAEMERQTAR 321
>gi|148546571|ref|YP_001266673.1| putative ribonuclease BN [Pseudomonas putida F1]
gi|148510629|gb|ABQ77489.1| putative ribonuclease BN [Pseudomonas putida F1]
Length = 318
Score = 156 bits (394), Expect = 4e-36, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 126/273 (46%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R ++
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQIGMQEFIVTLWTILRWPVIII 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LLMVAVALIYYVMPDVKQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|167644948|ref|YP_001682611.1| ribonuclease BN [Caulobacter sp. K31]
gi|167347378|gb|ABZ70113.1| ribonuclease BN [Caulobacter sp. K31]
Length = 414
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 118/275 (42%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ DI++ + A+A ++ LL++FP I +L G V +
Sbjct: 83 WRGWRDIVWRTGREVSVDRLPAVAGGVTFYTLLAIFPAIGAFVSLYGLFADIGGVEKQLR 142
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYR 121
+ +P + I +++L++ + L +S L + + ++ ++AL LN AY
Sbjct: 143 EMSSVFPASVVNIIGEQMLRLASQEQAKLGVAFVVSLLLSIWSANASMKALFDGLNVAYD 202
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R++ ++ + A V VI++ V + P+ + + L + R
Sbjct: 203 EDEKRNFVAKTAWTYAFTFCALVYAVILAGVLIGAPIVMERI-----GLSAAAAVWIPLR 257
Query: 182 IYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ F P + + ++ G +F +W++G++ F+ Y+ + Y
Sbjct: 258 WLIVLAVTAFAFAMLYRFAPCRARPRWRWVIWGAVFGAAAWLLGSLGFSLYVNNIAHYDA 317
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L +++ +V+++ + ++GAELNA +
Sbjct: 318 TYGPLGAVIAFMVWMWFSILTVLIGAELNAEIEHQ 352
>gi|327438684|dbj|BAK15049.1| predicted membrane protein [Solibacillus silvestris StLB046]
Length = 311
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 71/272 (26%), Positives = 118/272 (43%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I D I D M + ++ LLS FP ++F L +L Q + D +
Sbjct: 33 FIQDLIYRTKNVDMSGMGAQLAYFFLLSFFPMLIFMVTLLPYLNLEQ--GQIFDFLSDVM 90
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + I + VL GL +I + + +S GV+AL SLNRAY V E R+ ++
Sbjct: 91 PEEVYGLIETTLTDVLNNQNGGLLSIGIIGTLWSASRGVDALMKSLNRAYDV-EGRAGFL 149
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + + ++I V V + + + R +F
Sbjct: 150 NRLWSLVFTIALVAVILIALVFPVFGQQIGNIVFGYLGVEESFANVWTFVRWITPPTLIF 209
Query: 191 IGLIFVHLFLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I + ++ +P + + S++PG +F + W+V F+ YI F YS+ Y + +
Sbjct: 210 IVISVMYWIVPNTDPRLTMFSVIPGAVFATLGWLVLTYGFSFYINNFGNYSSTYGSIGGV 269
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++LY G+ ILG LNAS K+
Sbjct: 270 IILMLWLYFTGMIIILGGLLNASFQKRQLAKE 301
>gi|77164583|ref|YP_343108.1| ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|254434849|ref|ZP_05048357.1| YihY family protein [Nitrosococcus oceani AFC27]
gi|76882897|gb|ABA57578.1| Ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|207091182|gb|EDZ68453.1| YihY family protein [Nitrosococcus oceani AFC27]
Length = 328
Score = 155 bits (393), Expect = 4e-36, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 121/272 (44%), Gaps = 8/272 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DI Y + +++ +A+ ++ ALL++FP +V ++ G + V D +
Sbjct: 26 WRDIAYRIKDSLDDDNISIVAAGVAFYALLAIFPALVAMVSIYGIIADPADVQRQFDALS 85
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVE 124
G P +++++ ++ + + L + + A + ++ G +A I+LN Y E
Sbjct: 86 GILPTEAQVLLSEQLRRITSQASTALSVGVGVGVILALWSATRGTKAFIIALNIVYGEKE 145
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + I+ L A V ++ + V +P+ L+Y+ ++
Sbjct: 146 KRGFLKLNAIALMLTLGAIVLAILALGMIVVLPILLSYLD----LPEIFQVLASLLPWLL 201
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+GL ++ + P+ +++ + G + + W+VG+ LF+ Y+ F+ Y+ Y
Sbjct: 202 LAFTFILGLAVLYRYGPSRSEARWRWVSWGAVAATVLWIVGSALFSFYVANFAQYNKTYG 261
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++ L++ ++ +L AE NA M
Sbjct: 262 SVGALIILLMWFFVTAYIILLAAEFNAEMEHQ 293
>gi|104782989|ref|YP_609487.1| ribonuclease BN [Pseudomonas entomophila L48]
gi|95111976|emb|CAK16703.1| putative ribonuclease BN [Pseudomonas entomophila L48]
Length = 318
Score = 155 bits (393), Expect = 5e-36, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 127/273 (46%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++++ R A ++
Sbjct: 130 VWKRFPLSIIYTVGIAGMLLAAAALMVLGPQVMEWIASQVGLEEAVVVVWTILRWPAIII 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + ++ +P K K I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LMMVAVALIYYVMPDVKQKFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIEHLSAEGK 282
>gi|332992062|gb|AEF02117.1| putative ribonuclease protein [Alteromonas sp. SN2]
Length = 318
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 114/273 (41%), Gaps = 8/273 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I+ + + +A+ ++ LL++FP + +L G + + + + +
Sbjct: 17 LKNWWSIVKRTFTNIQSHNIPLIAAGVAFYCLLAIFPLLGATISLYGLMVSPEELQNHMA 76
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA---AYFSSNGVEALRISLNRAYR 121
++ P + I +++ + + L L + SS G AL + N Y
Sbjct: 77 LLVNVVPSDSSYIIEEQLKNLTQKSSSALGWGFFLTLFLSLWSSSKGANALITACNITYI 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R ++ + + +T+++ +P ++++ + I
Sbjct: 137 EDNGRGFFKGLIARITGTICMIITVIVALVCITVLPELISWISGGLISFKQASWIT---- 192
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L IGL ++ + P + ++ + PG +F + W+ + F+ Y+ F++Y+
Sbjct: 193 WPVLLLLFNIGLSALYRYAPHRRSAQWRWVTPGSLFATLLWIAASYGFSIYLNEFASYNK 252
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + I+ L++LY+ ++GAE+N+S+
Sbjct: 253 TYGSVGGIIILLMWLYLSAYIILIGAEVNSSIE 285
>gi|168178914|ref|ZP_02613578.1| YihY family protein [Clostridium botulinum NCTC 2916]
gi|182670173|gb|EDT82149.1| YihY family protein [Clostridium botulinum NCTC 2916]
Length = 285
Score = 155 bits (392), Expect = 5e-36, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 128/277 (46%), Gaps = 2/277 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I+ I F+E++ A++S ++ + ++SVFPF++F L G+L H
Sbjct: 3 KNLIKIMPKSIKKLANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--ED 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P + + I +++ L + S + + +S G A+ LNRAY
Sbjct: 61 LLLGLKEIMPSNTYLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYD 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ ++++ L + LV+ F+ V + I R
Sbjct: 121 VKERRSFVKVQIMTIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +
Sbjct: 181 YIIMIGVTIFILAALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRL 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y + +++ LV+LY+ + I G E+NA ++ +
Sbjct: 241 YGSIGAVIVFLVWLYLTSIIVITGGEINALLVSSREK 277
>gi|297624536|ref|YP_003705970.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
gi|297165716|gb|ADI15427.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
Length = 289
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ A F E+D AS ++ L S+FPFI+F L GFL +F +
Sbjct: 12 FAVLRRAFGKFGEDDMGTYASALAYQVLFSLFPFIIFLVALLGFLNIPEFFEYLRGQANE 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +A + I ++ P GL ++ L A + +S GV A +LN AY V E R
Sbjct: 72 VLPAQVADQVNQIIDEI-EQPRGGLLSLGILVALWTASAGVRATMNALNVAYGVSEGRPV 130
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +S Y + + L+ + + + P ++++ + + + R+ ++
Sbjct: 131 WKRMPLSLLYTVGLAAMLIAAAALLIFGPQVMSWLGELVGFANIFVTLWNLLRLPVAVVL 190
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + V+ P + + + I PG + + W++ + F+ Y+ F+ +S Y L ++
Sbjct: 191 LMLVVALVYYAFPDTEQRFVFITPGSVLAVLVWLLASWGFSLYVQNFADFSATYGSLGAV 250
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L + Y+ + GAE+N +
Sbjct: 251 VVILFYFYISASVLLFGAEINEVIE 275
>gi|26991244|ref|NP_746669.1| ribonuclease BN, putative [Pseudomonas putida KT2440]
gi|24986297|gb|AAN70133.1|AE016653_4 ribonuclease BN, putative [Pseudomonas putida KT2440]
Length = 318
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 126/273 (46%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVSEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R ++
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQIGMQEFIVTLWTILRWPVIII 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K + I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LLMVAVALIYYVMPDVKQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|264679388|ref|YP_003279295.1| ribonuclease BN [Comamonas testosteroni CNB-2]
gi|262209901|gb|ACY33999.1| putative ribonuclease BN [Comamonas testosteroni CNB-2]
Length = 596
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 100/260 (38%), Gaps = 9/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPE 72
+ F E+ AS ++ ++LL++ PF L V+ ++ PE
Sbjct: 203 LLARFKEDRLGVTASSLTFTSLLALVPFFTVALALFTAFPIFGKAQKVLERWLMDSLIPE 262
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
IA+ + + Q A A L + + + + +LN +RV ++R
Sbjct: 263 TIARQVLGYLTQF-ASKASQLGLVGFSILMVTAIALILTIDRTLNNIWRVRQLRPLGQRV 321
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + + L + L + + + A + P + + L G
Sbjct: 322 LIYWAAITLGPLLLGLSLVLSSYVMSASKGMVNALPGS------LRFVFDSIEFVVLAAG 375
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ ++P + L G +F + V + Y+ + TYS +Y A++ L
Sbjct: 376 MAGLYHYVPNTPVRWRHALVGGVFVAVFMEVAKKVLGLYLSSVPTYSVIYGAFATLPILL 435
Query: 253 VFLYMLGVFFILGAELNASM 272
+++Y+ +LGA + A +
Sbjct: 436 IWMYVAWSIVLLGALVTAYL 455
>gi|196034774|ref|ZP_03102182.1| YihY family protein [Bacillus cereus W]
gi|218901611|ref|YP_002449445.1| YihY family protein [Bacillus cereus AH820]
gi|228925661|ref|ZP_04088749.1| YihY [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228931903|ref|ZP_04094798.1| YihY [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228944214|ref|ZP_04106592.1| YihY [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|229120067|ref|ZP_04249321.1| YihY [Bacillus cereus 95/8201]
gi|195992817|gb|EDX56777.1| YihY family protein [Bacillus cereus W]
gi|218539779|gb|ACK92177.1| YihY family protein [Bacillus cereus AH820]
gi|228663386|gb|EEL18972.1| YihY [Bacillus cereus 95/8201]
gi|228815464|gb|EEM61707.1| YihY [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
gi|228827757|gb|EEM73496.1| YihY [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228833997|gb|EEM79546.1| YihY [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 286
Score = 155 bits (392), Expect = 6e-36, Method: Composition-based stats.
Identities = 71/270 (26%), Positives = 124/270 (45%), Gaps = 5/270 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V+D++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLDLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMNLIEVNVDKVVNEQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A + R+ ++
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALLVPVFGQVIGAEI---IGLSDTYSYAWSVTRLVSSF 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G +F I W+V + F +Y+ F+ Y+ Y GL
Sbjct: 187 FVLFALFSFLYTFAPDRKLKRREVVSGALFATIGWIVVSYSFAYYVDKFANYANTYGGLG 246
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 247 GIIVLMLWFYLTGWVILLGGEINGLLHHYR 276
>gi|120434656|ref|YP_860345.1| ribonuclease BN [Gramella forsetii KT0803]
gi|117576806|emb|CAL65275.1| ribonuclease BN [Gramella forsetii KT0803]
Length = 338
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 110/275 (40%), Gaps = 8/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
DI + + +++ ++ LS+FP IV ++ + + +
Sbjct: 37 LKGWIDIGKRVYKEMNVDHVQIVSAGVAFYFFLSIFPTIVVAISIYSLVLDPIQIQEQLS 96
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYR 121
+ PE ITD + V+ K + +S L + + ++ G AL +N AY
Sbjct: 97 RLTLILPEQAYGMITDILNPVINQDRKEIGWGLLVSILVSIWSANKGTSALFQGVNIAYD 156
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R L++ + L V +I + + PL + + L ++ R
Sbjct: 157 ETDNRGLIKKNLLTLLFTLAGVVIGLISLLIVIFFPLLVKNI----GLTPGLEDMLTWLR 212
Query: 182 IYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L L V+ P + K + G I I W+ G++ F+ Y+ F +Y
Sbjct: 213 WVFLGIILISTLSMVYKIAPNRSRPKFRWVSWGAILGTIFWLAGSMGFSWYVGNFGSYDD 272
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y A++ +++L++ ++GAE+N+ M
Sbjct: 273 LYGSFAAVAILMLWLFLTAFIVLMGAEINSEMEHQ 307
>gi|299530470|ref|ZP_07043890.1| putative ribonuclease BN [Comamonas testosteroni S44]
gi|298721446|gb|EFI62383.1| putative ribonuclease BN [Comamonas testosteroni S44]
Length = 599
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 100/260 (38%), Gaps = 9/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPE 72
+ F E+ AS ++ ++LL++ PF L V+ ++ PE
Sbjct: 206 LLARFKEDRLGVTASSLTFTSLLALVPFFTVALALFTAFPIFGKAQKVLERWLMDSLIPE 265
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
IA+ + + Q A A L + + + + +LN +RV ++R
Sbjct: 266 TIARQVLGYLTQF-ASKASQLGLVGFSILMVTAIALILTIDRTLNNIWRVRQLRPLGQRV 324
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + + L + L + + + A + P + + L G
Sbjct: 325 LIYWAAITLGPLLLGLSLVLSSYVMSASKGMVNALPGS------LRFVFDSIEFVVLAAG 378
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ ++P + L G +F + V + Y+ + TYS +Y A++ L
Sbjct: 379 MAGLYHYVPNTPVRWRHALVGGVFVAVFMEVAKKVLGLYLSSVPTYSVIYGAFATLPILL 438
Query: 253 VFLYMLGVFFILGAELNASM 272
+++Y+ +LGA + A +
Sbjct: 439 IWMYVAWSIVLLGALVTAYL 458
>gi|50953981|ref|YP_061269.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50950463|gb|AAT88164.1| membrane protein [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 348
Score = 155 bits (391), Expect = 7e-36, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 106/270 (39%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + F + +A+ ++ +L++FP ++ ++ G +G + + +
Sbjct: 19 HILKRTLRSFGRDACTDLAAGLTYFGVLALFPALIALVSVLGLVGQSKTGIDALFGMADQ 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ I + PA G I + A + +S V +LNR Y V E RS
Sbjct: 79 LAPGMLDVAHGPIEALSTSPATGWGLVIGIVGALWSASGYVGGFGRALNRVYGVEEGRSA 138
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ R + G + A + I++ V V + R A +A
Sbjct: 139 FVLRPVQLGVTVAAVALVAIVAVVLVVSGPIARTIGGAIGLGDAAQTAWEILRWPAVAVA 198
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ P K + G + V +VLF Y+ +Y Y LA
Sbjct: 199 LVVLVALLYSATPNVKRPGFRWLTAGSFTAIVLLGVASVLFAFYVANVGSYDKTYGALAG 258
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L+++++ V +LGAEL++ +
Sbjct: 259 VIVFLLWIWIANVALLLGAELDSEIERARQ 288
>gi|228476335|ref|ZP_04061036.1| transporter [Staphylococcus hominis SK119]
gi|228269618|gb|EEK11124.1| transporter [Staphylococcus hominis SK119]
Length = 402
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L++FP ++F L + D+V
Sbjct: 66 NFLSYLIYRIGKDDASGLAAQMTYHFVLALFPMLIFLLTLLPLFQIDP--QQIKDLVSQN 123
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P A +T + + + L ++ + A + +SNG+ A+ S N AY V + R+
Sbjct: 124 APAETADVVTKIFKDITSNSSGSLLSVGLILAIWSASNGMTAIMNSFNVAYDVEDARNPI 183
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ ++ L I + ++ + I RI ++ +
Sbjct: 184 VLKLLSILFTIVMAIVLAIALTLPTFGNFIKDHLFGPLGLDQQVAWIFDLVRILLPLIVI 243
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++ P K+K S+ PG IFT I W++G+ F Y+ F YS Y LA I+
Sbjct: 244 IILFLTLYSVAPNVKTKFKSVYPGAIFTSIVWLLGSFAFGWYLSNFGNYSKTYGSLAGII 303
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+++Y+ I+GAE+NA + + K
Sbjct: 304 ILLLWIYITCFIIIIGAEINAIIHQRHVIK 333
>gi|229592220|ref|YP_002874339.1| putative ribonuclease [Pseudomonas fluorescens SBW25]
gi|229364086|emb|CAY51687.1| putative ribonuclease [Pseudomonas fluorescens SBW25]
Length = 316
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ ++ FV+++ AS ++ L S+FPF++F L GFL F +
Sbjct: 9 LKLHKVLVRTVKEFVDDEMPTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFTWLRLQ 68
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + I Q+ GL ++ + A + +S GV + ++N AY VVE
Sbjct: 69 SELVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEG 127
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + +S Y + + L+ + + V P + ++ ++ + R
Sbjct: 128 RPIWKRFPLSIFYTVGIAGMLLAAAALMVLGPQVMEWLAGQIGMQEFVVTLWTIVRWPLI 187
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ L + ++ +P + K I PG + + W+V ++ F +Y+ TF+ Y+ MY +
Sbjct: 188 VILLMFAVALMYYVMPDVEQKFRFITPGSVLAVVVWIVASLGFGYYVKTFADYNAMYGSI 247
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+I+ L++ Y+ +LGAE+NA + K
Sbjct: 248 GAIIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|332531931|ref|ZP_08407815.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
gi|332038558|gb|EGI75001.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
Length = 317
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 120/278 (43%), Gaps = 8/278 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F +DI+ + E++ +A+ ++ ALL++FP I ++ + + + +
Sbjct: 18 FIGWWDIVKRIFKQMSEDNLSIVAAGVAFYALLAIFPAIAAMVSVYAYFSSPADISDHLS 77
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYR 121
+ P ++ I ++ + + L + + + SS G +AL + N +YR
Sbjct: 78 KIVTLLPPSTSELILSQVSSLAKTSSASLSLSAIGTLILTIWSSSKGSQALITACNISYR 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS++ +L+ F + + A V + + +P+ L V ++ L+I
Sbjct: 138 EYEKRSFFQAQLVRFLFSVGAIVVAIFALLIIGILPIVLNLV----GLKESIDLLIKLIS 193
Query: 182 IYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L+ ++ + P K K I G + W++ ++ F+ Y+ FS+Y+
Sbjct: 194 WPLLAFTFNFALVLLYRYAPHRKPAKWRWITMGSSIATVLWILASIGFSFYVSRFSSYNE 253
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L ++ L++LY+ LGA +NA+ +
Sbjct: 254 TYGSLGGVVIMLMWLYISAYIITLGAVINAATEQQTGK 291
>gi|146277245|ref|YP_001167404.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
gi|145555486|gb|ABP70099.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
Length = 322
Score = 155 bits (391), Expect = 8e-36, Method: Composition-based stats.
Identities = 58/273 (21%), Positives = 123/273 (45%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + ++ + G
Sbjct: 28 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPTLAAFVSLYGLFADPAVIADQVESLRGV 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +T ++ + + L IS L A + +++G++AL ++N A+ E R
Sbjct: 88 LPAEGIELVTAQLRTLAGGQSASLTVGFAISFLIAFWSANSGMKALIEAMNIAHDEREKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A + +S + + + V F +++W R +
Sbjct: 148 SFLKLTLLSFALTLGA----MTLSILMITAVAVVPAVLAIFDLGSGASVLVWLVRWPLLL 203
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ K+ + G + W+V ++ FT Y+ F+ YS Y L
Sbjct: 204 LVVAGAMAALYRWAPSRKAPEWRWVTWGSGIATVVWLVASIAFTIYLENFANYSATYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ L+++++ + I+GAE+N+ M R
Sbjct: 264 GALVGLLLWIWIAVMILIIGAEINSEMEHQTAR 296
>gi|115525638|ref|YP_782549.1| putative ribonuclease BN [Rhodopseudomonas palustris BisA53]
gi|115519585|gb|ABJ07569.1| putative ribonuclease BN [Rhodopseudomonas palustris BisA53]
Length = 370
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DII+ E ++ A+A+ + LL++FP I + + Q + + +
Sbjct: 74 WRDIIWRTYEQINDDRLLAVAAGVVFYGLLALFPAITALVSSYALVADPQTIRDHLSFLA 133
Query: 68 GAWPEVIAKPITDEILQVLAVPA---KGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
G P + D+I +VLA F S A + ++ G++A+ +LN Y E
Sbjct: 134 GVLPAGTFSVVEDQIARVLAKGEVKLGAAFLFSFALALWSANGGMKAIIDALNVVYDEEE 193
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + +S + L + ++ + VA P+ L+ V L++ GR A
Sbjct: 194 KRGFIKLNAVSLAFTLGGLLAVLAAIGLVVAAPILLSMV----GLGTIGDLLLRFGRWPA 249
Query: 185 TMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + GL ++ F P+ +S I G + + W+VG+ ++Y+ + Y Y
Sbjct: 250 LAVMILAGLAVLYRFAPSRRSPQWKWISVGSVSATVIWLVGSAALSYYLANYGAYDATYG 309
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L + + +++++M + +LGAELN+ + +
Sbjct: 310 SLGAAIGLMIWMWMSTIVVLLGAELNSEIEHQTVK 344
>gi|313497651|gb|ADR59017.1| Putative ribonuclease BN [Pseudomonas putida BIRD-1]
Length = 318
Score = 155 bits (391), Expect = 9e-36, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 126/273 (46%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLVRTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R ++
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQIGMQEFIVTLWTILRWPVIII 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P + + I PG + + W+V ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LLMVAVALIYYVMPDVEQQFRFITPGSVLAVVVWIVASLGFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|288559254|sp|A4VNB9|Y2825_PSEU5 RecName: Full=UPF0761 membrane protein PST_2825
gi|327481526|gb|AEA84836.1| membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 410
Score = 154 bits (390), Expect = 9e-36, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 101/283 (35%), Gaps = 9/283 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
M + F+ + F+ + G A+ ++ + L +V P + + + A + V
Sbjct: 1 MHQRIDNTFEFGRFLVRRFMADQGPQSAAALTYTTLFAVVPMMTVTFAMLSAIPAFKGVG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + I + +L + + L + + + + N
Sbjct: 61 EQIQFYIFNNFIPSTGATIQEYLLAFTSQARQ-LTWFGVGFLMATALMMLLTIEKAFNTI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + L+ + + L + L I + +
Sbjct: 120 WRVRQPRRGVSSFLLYWAILSLGPLLLGAGFATSTYIASLSLISGPYALIG------VGT 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L ++ +P + + L G +FT + + +F Y+ F +Y
Sbjct: 174 LIKVMPLLLSVAAFTLIYAAVPNTRVPLRHALVGGVFTAVLFEAAKQMFGVYVSYFPSYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASM-IIYYWRKKP 281
+Y A++ L+++Y+ + + GAEL + WR++P
Sbjct: 234 LIYGAFAAVPLFLLWIYLSWMIVLFGAELVCGLSSSQQWRRRP 276
>gi|167622301|ref|YP_001672595.1| ribonuclease BN [Shewanella halifaxensis HAW-EB4]
gi|167352323|gb|ABZ74936.1| putative ribonuclease BN [Shewanella halifaxensis HAW-EB4]
Length = 326
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 106/275 (38%), Gaps = 8/275 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + ++ + F E+ A H++ LLS+ P + ++ +
Sbjct: 6 RSFLLSIWAFFLHLLSRFKEDQVNIKAGHLAYVTLLSLVPIVAVMFSMLSAFPVFSGIRE 65
Query: 62 -VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ V+ + + I + +A +KG ++ A + + A+ +LN +
Sbjct: 66 KLEAFVYNNFLPAAGDTVQIYINEFVANASKG-TSVGIAALVVVALMLISAIDKALNSIW 124
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R E R ++ + + + L V + I + L ++
Sbjct: 125 RTKEKRQAAVSFSMYWMVLTLGPVLVGASLVATSYIVSLKVFNTS------ELSGVVPIL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
ML + +++ +P K K + L G + + + +G F +Y+ F +Y
Sbjct: 179 IERLPMLFSVAAFLLLYMVVPIKKVKFLHALLGALVAAMLFELGKKGFAYYVTQFPSYEA 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ V ++GAE+ A + Y
Sbjct: 239 IYGALATIPILFVWVYVSWVIVLVGAEITAGLPEY 273
>gi|170781551|ref|YP_001709883.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169156119|emb|CAQ01258.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 394
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 57/268 (21%), Positives = 113/268 (42%), Gaps = 3/268 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWP 71
A+ F++ G M + ++ + LS+ P V +L G +G V V+ V+
Sbjct: 40 RRAVYGFMKHRGIDMTASLTFYSTLSLVPAAVAVLSLIGVVGDTRAGVEGVLAVLTSVLG 99
Query: 72 EVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ I D + Q+ P G+ FT+S L A + S+ V A ++NR E R
Sbjct: 100 DSAVDVIRDPVEQLADGPRSGVAFTVSFLGALWTSAAYVTAFGRAMNRVQETEEGRPLVK 159
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R + G + V V+M + + + + L++ + + L
Sbjct: 160 YRALMLGVTIALLVVSVVMVGMLLLTDEGARALGQQLGLGDTTLVVWAVVKWPLLVALLT 219
Query: 191 IGLIFVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ P + + + +L G + ++W +G F Y+ +TY + Y L +++
Sbjct: 220 GIIGVLYAATPNLRRRRVDLLTWGSLVAIVAWGLGTAGFVAYVTHVATYESTYGVLGAVI 279
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
L++LY+ + +LG EL+ +I
Sbjct: 280 VLLLWLYIGNLSLVLGGELDVEIIRARQ 307
>gi|298293294|ref|YP_003695233.1| ribonuclease BN [Starkeya novella DSM 506]
gi|296929805|gb|ADH90614.1| ribonuclease BN [Starkeya novella DSM 506]
Length = 375
Score = 154 bits (390), Expect = 1e-35, Method: Composition-based stats.
Identities = 59/275 (21%), Positives = 119/275 (43%), Gaps = 8/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ DI+ F + ++++ ++ LL++FP + +L G + + ++
Sbjct: 77 YRGWRDILIRTFNEFFADRVLSLSAGVTFYTLLAIFPALAAFISLYGLFLDPASIQSQLE 136
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYR 121
P + + D+I ++LA L S A + ++ G +A+ +LN AY
Sbjct: 137 AASWFLPAGAVEVMRDQIARLLANGPSSLGLRSFFSLALALWSANAGTKAVIEALNIAYE 196
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS+ L + G+ L A + V+ VA+PL L + +I R
Sbjct: 197 EEERRSFVRLTLTTLGFTLAAILFAVVALAAVVALPLVLKVLY----LPSGTEWLISLLR 252
Query: 182 IYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + + V+ F P + + + G + W+ +V F+ Y+ F++Y
Sbjct: 253 WPALAVVVAFVITVVYRFGPCRQRPQWRWVSMGSAVAAVLWLATSVGFSWYVSRFASYEQ 312
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L +++ +V++++ +LGAELNA +
Sbjct: 313 TYGSLGAVVGFMVWIWLSVTVVLLGAELNAEIEHQ 347
>gi|292493155|ref|YP_003528594.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
gi|291581750|gb|ADE16207.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
Length = 456
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 98/267 (36%), Gaps = 2/267 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + Y F E + A+ + + LLS+ P + ++ G H +
Sbjct: 28 QAFLRPKLKLTYVVSREFFEGELTLRATSLVYTTLLSLAPLLAVSFSVLKAFGVHNQMEP 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ + T I V + L +I Y + ++ + + N +R
Sbjct: 88 VLHHFLLPLGPRAEEITTRIIQYVENLKVGALGSIGLGLLFYTVVSLIQKIESAFNHVWR 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + +L+ V + ++ + L +
Sbjct: 148 IKRERPFLRRFSDYLSVLLIGPVLVFSAVGATASVMQTS--FIQTLLEFEVLGKALVAMS 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + G F++ FLP K + + L G + W +LF +I T + Y +
Sbjct: 206 KLLPYLLVIGGFTFIYAFLPNTKVRFGNALVGGAVAGVLWETIGLLFAFFITTSTKYDAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ LA ++ +++LY+ + ++GA++
Sbjct: 266 YSSLAILILFMIWLYISWLILLVGAQV 292
>gi|221066065|ref|ZP_03542170.1| ribonuclease BN [Comamonas testosteroni KF-1]
gi|220711088|gb|EED66456.1| ribonuclease BN [Comamonas testosteroni KF-1]
Length = 590
Score = 154 bits (389), Expect = 1e-35, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 100/260 (38%), Gaps = 9/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPE 72
+ F E+ AS ++ ++LL++ PF L V+ ++ PE
Sbjct: 197 LLARFKEDRLGVTASSLTFTSLLALVPFFTVALALFTAFPIFGKAQKVLERWLMDSLIPE 256
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
IA+ + + Q A A L + + + + +LN +RV ++R
Sbjct: 257 TIARQVLGYLTQF-ASKASQLGLVGFSILMVTAIALILTIDRTLNNIWRVRQLRPLGQRV 315
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + + L + L + + + A + P + + L G
Sbjct: 316 LIYWAAITLGPLLLGLSLVLSSYVMSASKGLVNALPGS------LRFVFDSIEFVVLAAG 369
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ ++P + L G +F + V + Y+ + TYS +Y A++ L
Sbjct: 370 MAGLYHYVPNTPVRWRHALVGGVFVAVFMEVAKKVLGLYLSSVPTYSVIYGAFATLPILL 429
Query: 253 VFLYMLGVFFILGAELNASM 272
+++Y+ +LGA + A +
Sbjct: 430 IWMYVAWSIVLLGALVTAYL 449
>gi|238063813|ref|ZP_04608522.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
gi|237885624|gb|EEP74452.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
Length = 340
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 105/282 (37%), Gaps = 7/282 (2%)
Query: 2 REYFCIVFD-IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
R+ + ++ + +FV+++ A+ ++ +L++FP + L G + +
Sbjct: 37 RQLSWPTWRGVLLRSGRNFVKDNCADWAAALTYYGVLALFPSAIVVVALVGLVSDGERTV 96
Query: 61 TVIDVVFGAWPEVIA---KPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRIS 115
+ + + V+ + L + L A + +S + A +
Sbjct: 97 DTVIDLAREVGAGSVVGNDGFVSAVRGVVDQQSGTKALLSFGLLGALWSASGFIGAFTRA 156
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
N Y V E R + R + G + V L +++ + V + A G
Sbjct: 157 SNAIYGVQEGRPVWKLRPLQIGLAAVTLVLLAVVATGLIVSGPVTDAVGELVGAGGLART 216
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + + + + L + P + + PG +SW + + F Y+
Sbjct: 217 VWGVAKWPVLAMVMMVLLSLLFWIAPNVRQPRFRWLTPGGAVALVSWALASFGFGLYVAN 276
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
F +Y Y L +++ LV+LY+ +LG ++NA +
Sbjct: 277 FGSYDVTYGSLGAVIAFLVWLYLSNSALMLGVQINAELQRGR 318
>gi|187478768|ref|YP_786792.1| membrane-associated ribonuclease [Bordetella avium 197N]
gi|115423354|emb|CAJ49888.1| putative membrane-associated ribonuclease [Bordetella avium 197N]
Length = 438
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 101/280 (36%), Gaps = 9/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A+ +E +AS ++ + +L++ P + G +L Q
Sbjct: 17 RSWLERLARAFRFALSRADKERLLEVASSLTFTTVLAIVPMLAVGLSLFTAFPVFQDFRL 76
Query: 62 VIDVVF--GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ P ++ I D + Q A A L I S + + + N
Sbjct: 77 ALEDFLANNLMPPEVSDNIMDYLNQF-ARQASRLTAIGGAFLVVTSLLLIMTIDKTFNDI 135
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V R W L+ + + L V + + R+ + ++ I+
Sbjct: 136 WHVGRQRPWPQRALVYWAVLTLGPVATGASLWATSFV------ARESMGLISDVPEIVSL 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G +L +G + + +P + L G T + F Y+ F Y+
Sbjct: 190 GISLVPLLLTGLGFSALFVVVPNCRVYWRDALTGGFCTAFALEAMKAGFALYLNRFPAYT 249
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A++ L+++Y+ + +LGA + A++ +
Sbjct: 250 VIYGAFATLPIFLLWIYLSWLAVLLGASIAANVPRVRLGR 289
>gi|298528711|ref|ZP_07016115.1| ribonuclease BN [Desulfonatronospira thiodismutans ASO3-1]
gi|298512363|gb|EFI36265.1| ribonuclease BN [Desulfonatronospira thiodismutans ASO3-1]
Length = 443
Score = 154 bits (388), Expect = 2e-35, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 106/276 (38%), Gaps = 1/276 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + A++ F D AS ++ LLS+ P + +A G + +
Sbjct: 25 KAFMTHHLRVFLAALQGFSRNDCSMRASSLTYYTLLSIVPVMALAFGIAKGFGLDDMLQS 84
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ GA E+ + + + + + L + ++ + +S N +
Sbjct: 85 QLEQYLGAHEEIFDEVVQFSYSMLEVTRGGVIAGVGFLFLLWAVIKVLDHIELSFNAVWG 144
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RSW ++LA V +++ + V + + L + + G
Sbjct: 145 VQEGRSWVRKFTEYLSVMVLAPVLVILSGSLTVFLTTEIYKYLAE-GWLALVADLFQWGA 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++ F+ + +P + + L I + + + + ++ V Y+ +
Sbjct: 204 QFTPYVIIWLLFTFLFMAMPNTRVNFKAALIAGIISGTMFQLLQWGYVNFQVGVVRYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A++ LV+L + + +LGAEL+ +
Sbjct: 264 YGSFAALPLFLVWLQLSWMIVLLGAELSYAYQNVRR 299
>gi|78223975|ref|YP_385722.1| ribonuclease BN [Geobacter metallireducens GS-15]
gi|78195230|gb|ABB32997.1| tRNA-processing RNAse BN [Geobacter metallireducens GS-15]
Length = 453
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 96/279 (34%), Gaps = 5/279 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I ++ F+++ AS ++ S LLS+ PF + G +
Sbjct: 31 KGRLLRCLQIGALVVKDFLDDQCLIRASALAFSTLLSIVPFFALAFAVLKGFGVQNTLE- 89
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + + L I A + + + N +
Sbjct: 90 --PFILDQVAAGSHEIVDKIVAYINNTKVGSLGAIGLAALFVTVVTLLGNVEEAFNAIWG 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS Y ++ + L I ++ L +
Sbjct: 148 VRETRSLYRKFSDYLSVLVSGPILLFAAVSTTTTIE--SQAFVQWIMGYTYLGDALLALF 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L+++I L+F+++F+P K + S L G I W + H+ V + Y+ +
Sbjct: 206 RLVPYLSIWIALVFLYMFIPNTKVRFRSALVGGIIAGTIWQGAQWGYIHFQVGVAKYNAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA + +V+LY V +LG E+ + ++
Sbjct: 266 YGTLAVLPVFMVWLYASWVIVLLGGEVVYAHQHLRTFRR 304
>gi|330957628|gb|EGH57888.1| ribonuclease BN [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 323
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A +L L
Sbjct: 132 KRFPLSILYTIGIAGMLLAAAAFMVLGPQVMNWIAAQVGMEEFIVTLWTILRWPAIILLL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MIAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|298506496|gb|ADI85219.1| membrane-bound transcriptional regulator, ribonuclease BN-related
[Geobacter sulfurreducens KN400]
Length = 438
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 97/279 (34%), Gaps = 5/279 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R A+ +F+++ AS ++ S LLS+ PF + LG +
Sbjct: 28 RGRLVAALQATVTAVGNFMDDQCLLHASALTYSTLLSIVPFFALAFAVLKGLGVQNTLE- 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + + L + + + + + + N +
Sbjct: 87 --PFILDQVAAGSHEIVDRIVTYINNTKVGSLGAVGLVTLVVSTVTLLGNIEETFNSIWG 144
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS Y V+ + + V + ++ L ++
Sbjct: 145 VRETRSLYRRFSDYLSVVVFGPILIFAAISVTTTLES--QKAVQWLIGTAYLGDVLVAAF 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++++ L+F+++ +P K + S L G + W + H+ V + Y+ +
Sbjct: 203 RLVPYISIWLALVFLYMLIPNTKVRFRSALVGGVIAGTLWQAAQWGYIHFQVGVAKYNAI 262
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA + +++LY + G E+ + ++
Sbjct: 263 YGTLAVLPVFMIWLYASWSIVLFGVEVVYAHQHRRTFRR 301
>gi|330967398|gb|EGH67658.1| ribonuclease BN [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 323
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 124/275 (45%), Gaps = 1/275 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 9 LRIGKVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQ 68
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + I Q+ GL +I + A + +S GV + ++N AY VVE
Sbjct: 69 SELVLPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEG 127
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + +S Y + + L+ + V P + ++ ++ + R A
Sbjct: 128 RPIWKRFPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAI 187
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY +
Sbjct: 188 ILLLMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSI 247
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+I+ L++ Y+ +LGAE+NA + K
Sbjct: 248 GAIIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|291613211|ref|YP_003523368.1| ribonuclease BN [Sideroxydans lithotrophicus ES-1]
gi|291583323|gb|ADE10981.1| ribonuclease BN [Sideroxydans lithotrophicus ES-1]
Length = 415
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 93/269 (34%), Gaps = 7/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVF 67
F + E+ MA+ ++ + LLSV P I L + ++ + + +
Sbjct: 22 FRFLRYVTVRLQEDRCTQMAASLTFTTLLSVVPLITIALILFSAFPSFSEYSTPIKEFIL 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
I +Q A L + A + + + + N +RV RS
Sbjct: 82 KNMVPETGGRIITSYMQQFTESASRLTAAGLVFLAVTAMLLMLTIDNAFNMIWRVSRPRS 141
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + + LA + + + + A + P++G ++
Sbjct: 142 LLQRVLVYWAVLTLAPLLVGGSLSLTSWLVGFSAEYARQVPSIGMD------VLKLLPVV 195
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +P + L G + +++ F YI F+ Y +Y AS
Sbjct: 196 MTTAAFTLLFRVVPNRYVPMPHALIGGLIAAVAFESMNRAFAFYISHFANYKLVYGAFAS 255
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ L+++Y + + GA + AS+ +
Sbjct: 256 VPIFLMWVYFSWITVLFGAIITASLSHWR 284
>gi|28868803|ref|NP_791422.1| ribonuclease BN [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969591|ref|ZP_03397727.1| ribonuclease BN [Pseudomonas syringae pv. tomato T1]
gi|302058803|ref|ZP_07250344.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato K40]
gi|302134492|ref|ZP_07260482.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28852042|gb|AAO55117.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213925687|gb|EEB59246.1| ribonuclease BN [Pseudomonas syringae pv. tomato T1]
gi|331017340|gb|EGH97396.1| ribonuclease BN, putative [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 323
Score = 153 bits (387), Expect = 3e-35, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLLRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSELV 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A +L L
Sbjct: 132 KRFPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIILLL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|237798880|ref|ZP_04587341.1| ribonuclease BN [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021734|gb|EGI01791.1| ribonuclease BN [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 323
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRFPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQVGMEEIIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|319943764|ref|ZP_08018045.1| YihY family protein [Lautropia mirabilis ATCC 51599]
gi|319742997|gb|EFV95403.1| YihY family protein [Lautropia mirabilis ATCC 51599]
Length = 653
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 101/264 (38%), Gaps = 2/264 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + + A+ + + LLS+ P + +++ G H + +
Sbjct: 29 FLKALAVFLAVVRDLAFGQLMLRATSLVYTTLLSIVPVLALTFSVSKAFGVHGQIEPALQ 88
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
A+ T+ + + + L ++ + + + + + S+N + V
Sbjct: 89 RFMEPLGPKGAEITTNIMSFIDNMHVGVLGSVGLGMLLFTAVSTILKIESSINTIWHVKT 148
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
MR +LL + +V + LA +++ + ++ +
Sbjct: 149 MRPLSQRISYYLCVMLLGPILVVSALGL--NATLASSHLVQMIISVEPFGHLAVLAGRLL 206
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + +F++LF+P + +++ L + I W F ++ + Y+ +Y+
Sbjct: 207 PYVLVIGLFLFLYLFMPNTRVRLLPALTSALVAGICWQSAGWAFARFVAGSTQYAAIYSS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
LA ++ +++LY+ + ++GA +
Sbjct: 267 LAILIIFMIWLYVSWIVVLVGASV 290
>gi|229494654|ref|ZP_04388414.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
gi|229318447|gb|EEN84308.1| tRNA processing ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 321
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 49/253 (19%), Positives = 103/253 (40%), Gaps = 3/253 (1%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVP 89
++ ++LS+FP ++ +L G G V V+ +V P + + + + Q + P
Sbjct: 1 MTYYSVLSLFPAVLAVVSLLGVFGQGQSTVDAVLQIVSDLGPSSAVETLKEPVQQHVEAP 60
Query: 90 AKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
A G A + +S + A +LNR Y V E R + R + A +
Sbjct: 61 AAGFALIAGIAGALWSASGYLVAFGRALNRMYEVEEGRPVWKLRPTMLLVTVTALALIGC 120
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK-I 207
+ + + A L + R ++ + + + ++ P +
Sbjct: 121 AAVMLAVSGPVARAIGDASGAGDTALTVWNIARWPVVLVFVVLAVAILYYAPPNIQQPKF 180
Query: 208 MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
I G + W++ +V+F Y+ FS+Y+ Y LA + L++L++ + + GAE
Sbjct: 181 RWISGGAALAIVVWILASVIFGFYVANFSSYNKTYGSLAGAIVFLLWLWITNLALLFGAE 240
Query: 268 LNASMIIYYWRKK 280
L++ + ++
Sbjct: 241 LDSELERGRELRQ 253
>gi|108803594|ref|YP_643531.1| ribonuclease BN [Rubrobacter xylanophilus DSM 9941]
gi|108764837|gb|ABG03719.1| ribonuclease BN, putative [Rubrobacter xylanophilus DSM 9941]
Length = 328
Score = 153 bits (386), Expect = 3e-35, Method: Composition-based stats.
Identities = 61/272 (22%), Positives = 113/272 (41%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ +E +D MA+ ++ +L++FPF++ +L G + + V+
Sbjct: 38 LRALRATVEKLQRDDAAGMAAQLAYYLILALFPFMLVLVSLMGTFSSPELAEEVLAYFRQ 97
Query: 69 AWPEVIAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + I V+ PA GL + L + +S AL +LN AY V E R
Sbjct: 98 VLPQQVYALIATYTGDVIRGEHPAPGLLSFGILLTLWSASGAFNALIKALNAAYEVQETR 157
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ R ++ G L S + + + V P + +FF R +
Sbjct: 158 PFWKVRALAVGMTLGLSGLIFLGVLLMVFGPPIGEAIARFFGLGTVFEAAWNVARWPVAL 217
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + + ++ PA I PG + + WVV + F+ Y+ F +Y+ Y +
Sbjct: 218 LFLVVTVALIYYLAPAVDQPFRWITPGGLVAVLLWVVASAAFSFYVNNFGSYNKTYGSIG 277
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L++LY+ + + GA LNA++
Sbjct: 278 VAIVLLLYLYISSLTILFGAALNATLARAKEE 309
>gi|301058912|ref|ZP_07199883.1| YihY family protein [delta proteobacterium NaphS2]
gi|300446986|gb|EFK10780.1| YihY family protein [delta proteobacterium NaphS2]
Length = 448
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 104/278 (37%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + A+ F E+ AS ++ +LLS+ P + +A G + +
Sbjct: 34 KAFHIRTLRTVLLAVRAFNEDQCMFRASALTFYSLLSIVPVLAMAFGIAKGFGFQKALEH 93
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ F EVI + + + L + + + + N+
Sbjct: 94 QLQETFYGHEEVIQNITVFANSMLETTKGGLIAGVGVLILFWTVIRVLGNVEGAFNQILN 153
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS +++ + L++ S + V I + + F LG + I+
Sbjct: 154 FPESRSLARKVSDYMSTMVICTFLLILSSTLTVVIKSQVTSAVESFSILGTVSPAIFFLL 213
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ F+++FLP K +LP + T + + + + + + Y+ +
Sbjct: 214 KLLPYCVIWLLFTFLYMFLPNGKISWKFVLPAAVATGTLFQLFQWGYVSFQIGVTRYNAI 273
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y A++ LV+L + + + GAEL S+ K
Sbjct: 274 YGSFAALPLFLVWLQISWLIVLFGAELLFSIQNQKDYK 311
>gi|227819758|ref|YP_002823729.1| ribonuclease [Sinorhizobium fredii NGR234]
gi|227338757|gb|ACP22976.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
Length = 330
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 56/272 (20%), Positives = 126/272 (46%), Gaps = 8/272 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + + EE + +A+ +S LL++FP + +L GF+ + + + V+
Sbjct: 34 IRDVFWRVVSEISEERVFLIAAGVSFYLLLALFPALGALVSLYGFVANPSDIGSHMAVLD 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVE 124
P I D++ + A L L + + ++NG+ AL ++N AY E
Sbjct: 94 ELLPPGSFDLIADQLKSLTTQKASTLSLGFIGGLLVSLWSAANGIAALFDAMNVAYGEKE 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R L+ + A + VI+ +P LAY+ + ++ R A
Sbjct: 154 KRGIVSRTLLCLAFTFAALLFAVILIVAIGVLPAMLAYL----WLDRWVEILTRVARWPA 209
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ +G + ++ + P+ ++K+ + G +F+ + W+ + ++++Y+ F+ Y+ Y
Sbjct: 210 ILILATLGTVLIYRYGPSRERAKLRWLNWGAVFSTLLWLAASWIYSYYLENFANYNATYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L +++ ++++++ V I GA LNA +
Sbjct: 270 ALGALIGFMMWVWISMVILITGALLNAELEHQ 301
>gi|319779629|ref|YP_004130542.1| Ribonuclease BN [Taylorella equigenitalis MCE9]
gi|317109653|gb|ADU92399.1| Ribonuclease BN [Taylorella equigenitalis MCE9]
Length = 445
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 103/268 (38%), Gaps = 9/268 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGA 69
+ ++E+ +A ++ + +L++ P + +L + + +
Sbjct: 39 LLYIYNRVLKENITQVAGTLTYTTVLAIVPLLAVILSLFTAFPMFNTMQGDLQNYMTSNL 98
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE I+ I + + Q G+ + ++ S ++ + LN+ +RV + R +
Sbjct: 99 MPESISDQIMNYLNQFAESAR-GMTVVGSVFLVITSIMLMKTVDEVLNKMFRVSKQRPLW 157
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ LI + + + + + A + + NL+ I+ +
Sbjct: 158 VRILIYWAILSVGPFVFATSIWASSYVTRAKLGMGVDLSFVQNLVGTIF------PFILS 211
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI ++ +P + L G + + + F +YI F +Y+ +Y A+I
Sbjct: 212 FISFSLIYKIVPNRQVHWKDALIGGATAALLFEGLKLGFAYYISRFPSYTLIYGTFATIP 271
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ + + GA L + + +
Sbjct: 272 LFLLWIYISWIIVLAGALLVSMLPQLRY 299
>gi|289676936|ref|ZP_06497826.1| ribonuclease BN [Pseudomonas syringae pv. syringae FF5]
gi|330896887|gb|EGH28477.1| ribonuclease BN [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330942464|gb|EGH45061.1| ribonuclease BN [Pseudomonas syringae pv. pisi str. 1704B]
Length = 321
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|325277884|ref|ZP_08143430.1| ribonuclease BN [Pseudomonas sp. TJI-51]
gi|324096987|gb|EGB95287.1| ribonuclease BN [Pseudomonas sp. TJI-51]
Length = 319
Score = 152 bits (385), Expect = 4e-35, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 125/273 (45%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ F++++ AS ++ AL S+FPF++F L GFL F +
Sbjct: 11 LHRVLARTVKEFLDDEMSTYASALAYQALFSLFPFLLFLIALIGFLHLPDFFSWLRLQSE 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I Q+ GL ++ + A + +S GV + ++N AY V E R
Sbjct: 71 LVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVPEGRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S Y + + L+ + + V P + ++ ++ + R +
Sbjct: 130 VWKRIPLSIFYTVGLAGMLLAAAALMVLGPQVMEWIAAQIGMQEFIVTLWTVLRWPVIVF 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ +P K K I PG + + W++ ++ F +Y+ TF+ Y+ MY + +
Sbjct: 190 LLMVAVALIYYVMPDVKQKFRFITPGSVLAVVVWIIASLGFAYYVKTFADYNAMYGSIGA 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++ Y+ +LGAE+NA + K
Sbjct: 250 IIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|302866698|ref|YP_003835335.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|302569557|gb|ADL45759.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
Length = 340
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 99/283 (34%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD-IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+R+ + ++ + + FV ++ A+ ++ +L++FP + L G +
Sbjct: 21 IRQLNWRTWRGVLVRSGKGFVTDNCADWAAALTYYGVLALFPSTIVVVALVGLVSDGPRT 80
Query: 60 PTVIDVVFGAWPEVIA---KPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRI 114
+ + + V+ L + L A + +S + A
Sbjct: 81 VDTVIDLAREIGAGSVVGNDAFVGVVRNVVEQQGSAKVLLSFGLLGALWSASGFIGAFTR 140
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ N Y V E R +Y R + G + V L +++ + V A
Sbjct: 141 ASNAIYGVREGRPFYRLRPLQIGMAAVTIVLLAVVATGLIVSGPVTDAVGDLLHAGAVAR 200
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIV 233
+ + L + P + + PG +WV+ + F Y+
Sbjct: 201 TTWSVAKWPLLAVVAMTLLSLLFWIAPNVRQPRFRWLTPGGALALAAWVLASFGFGLYVA 260
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
F +Y Y L +++ LV+LY+ +LG ++NA +
Sbjct: 261 NFGSYDVTYGSLGAVIAFLVWLYLSNCALMLGVQVNAELQRGR 303
>gi|262052870|ref|ZP_06025054.1| hypothetical protein SA930_0032 [Staphylococcus aureus 930918-3]
gi|259159224|gb|EEW44284.1| hypothetical protein SA930_0032 [Staphylococcus aureus 930918-3]
Length = 405
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|163746838|ref|ZP_02154195.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
gi|161379952|gb|EDQ04364.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
Length = 315
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 60/273 (21%), Positives = 117/273 (42%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + +A+ ++ ALL++FP + LAG + V ++ +
Sbjct: 20 DILFRVKDEIAADHVSLVAAGVAFYALLAIFPAVTALMALAGLVMEPAQVTEQLEAITRL 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE A I D+ + V GL I A Y +S GV +L LN AY E R
Sbjct: 80 IPEEAATIILDQAIAVTGSEETGLGWAFLIGVGLALYSASKGVGSLMEGLNVAYDEDETR 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + G L+ L++ +A+P + ++ ++ G
Sbjct: 140 GFVTKLIWTLGLTLMLVGVLLLGLGATLAVPAVVNFLA----LPDWFETLLTYGSWVLLA 195
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L ++ + PA ++ + PG + + W+V +V F+ Y+ F +Y+ + +
Sbjct: 196 ALTVLALAVLYRYGPARDNAEWKWLTPGSVIACVLWIVASVGFSIYVSNFGSYNESFGSM 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A + L++L++ +LGAE N+ M +
Sbjct: 256 AGAIILLMWLWISAFIVLLGAEFNSEMEAQTRK 288
>gi|301383365|ref|ZP_07231783.1| ribonuclease BN, putative [Pseudomonas syringae pv. tomato Max13]
Length = 323
Score = 152 bits (384), Expect = 5e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 122/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLLRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSELV 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A +L L
Sbjct: 132 KRFPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIILLL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+ ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIFASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|302187707|ref|ZP_07264380.1| ribonuclease BN [Pseudomonas syringae pv. syringae 642]
Length = 321
Score = 152 bits (383), Expect = 6e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|326562450|gb|EGE12769.1| putative ribonuclease BN [Moraxella catarrhalis 7169]
gi|326563224|gb|EGE13492.1| putative ribonuclease BN [Moraxella catarrhalis 12P80B1]
gi|326569158|gb|EGE19220.1| putative ribonuclease BN [Moraxella catarrhalis BC1]
Length = 500
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 105/275 (38%), Gaps = 6/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
F + + HF+++D A+ ++ + LL++ P + + + A V +
Sbjct: 15 WFMYLRLLVRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTI 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
++ + I A + L + + + + + N+ +RV E
Sbjct: 75 SANLFPTASEQVAGYIRSF-AEKSSNLGLVGVAGLFVTAIMTLNTIEYAFNKIWRVQERS 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + + L V L + AI R+ + ++
Sbjct: 134 GGAASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYGID----WGIWAYLVSL 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G I ++ F+P A+ I + I T I + +F + F++Y +Y A
Sbjct: 190 ALMTCGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVMTNFTSYEAIYGAFA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 250 ALPIFLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|114049195|ref|YP_739745.1| ribonuclease BN [Shewanella sp. MR-7]
gi|122944315|sp|Q0HQB7|Y3708_SHESR RecName: Full=UPF0761 membrane protein Shewmr7_3708
gi|113890637|gb|ABI44688.1| tRNA-processing RNAse BN [Shewanella sp. MR-7]
Length = 337
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 105/276 (38%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F ++ + + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IQVLFLGIWRFLLHLRQRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEAFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + L
Sbjct: 129 WRTKEKRSVVVAFSMYWMVITLGPVLVGASLVATSYVVSLKLFEGDALSGVMPL------ 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K L G + + + +G F Y+ F +Y
Sbjct: 183 FIERLPMLFSVAAFLLLYMVVPNQKVKFWHALLGAVVAALLFELGKKGFALYVTKFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|117918768|ref|YP_867960.1| ribonuclease BN [Shewanella sp. ANA-3]
gi|166199586|sp|A0KRY5|Y311_SHESA RecName: Full=UPF0761 membrane protein Shewana3_0311
gi|117611100|gb|ABK46554.1| tRNA-processing RNAse BN [Shewanella sp. ANA-3]
Length = 337
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 105/276 (38%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F ++ + + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IQVLFLGIWRFLLHLRQRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEAFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + L
Sbjct: 129 WRTKEKRSVVVAFSMYWMVITLGPVLVGASLVATSYVVSLKLFEGDALSGVMPL------ 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K L G + + + +G F Y+ F +Y
Sbjct: 183 FIERLPMLFSVAAFLLLYMVVPNQKVKFWHALLGAVVAALLFELGKKGFALYVTKFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|257486817|ref|ZP_05640858.1| ribonuclease BN, putative [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289625973|ref|ZP_06458927.1| ribonuclease BN, putative [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647974|ref|ZP_06479317.1| ribonuclease BN, putative [Pseudomonas syringae pv. aesculi str.
2250]
gi|298488187|ref|ZP_07006224.1| Ribonuclease BN [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298157466|gb|EFH98549.1| Ribonuclease BN [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330869370|gb|EGH04079.1| ribonuclease BN [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330988666|gb|EGH86769.1| ribonuclease BN [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 322
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|39934322|ref|NP_946598.1| ribonuclease BN [Rhodopseudomonas palustris CGA009]
gi|39648170|emb|CAE26690.1| Ribonuclease BN [Rhodopseudomonas palustris CGA009]
Length = 360
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 110/268 (41%), Gaps = 8/268 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
E ++ + +A+ + LL++FP I + + + + P
Sbjct: 89 TYERIGDDRLFLVAAGVVFYWLLALFPAITALVSSYALFADAATIGDHLAQLSSIVPAGT 148
Query: 75 AKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +++ +VLA L + A + ++ GV+A+ +LN Y V E R ++
Sbjct: 149 YSVVEEQVGRVLANGQTKLGFAFLISLSLALWSANGGVKAIIDALNAVYDVEEQRGFFKL 208
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
S L A ++ + +A P+ LA + + + I GR L F
Sbjct: 209 NGFSLLLTLGALGAVLAAIGLVIAAPIVLARI----GLGNLVAVAIDYGRWPVLALMTFG 264
Query: 192 GLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
GL ++ P + PG I +SW+ G+ ++Y+ F+ Y+ Y L + +
Sbjct: 265 GLSLLYRTAPNRPSPPWRWVAPGSIVATLSWLAGSAALSYYLANFADYNATYGSLGAAIG 324
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWR 278
+++++M + + G E+NA + R
Sbjct: 325 LMIWMWMTAIVVLAGGEVNAEIEARAGR 352
>gi|256394381|ref|YP_003115945.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256360607|gb|ACU74104.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 331
Score = 152 bits (383), Expect = 7e-35, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 107/275 (38%), Gaps = 5/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + ++ A+ ++ L+VFP ++ ++ G LG V TV+D
Sbjct: 50 RNWLSVLKRSAVAAHTDELVDRAAALTYYGFLAVFPTLLLAISVLGLLGT-STVNTVLDN 108
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V P + + I QV A G L L A + +S V A + N Y V
Sbjct: 109 VQKLAPGSVHDVLRTAITQVRASGGTGGTLAIAGVLGALWSASGYVGAFIRASNVVYGVR 168
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + T + G +L VT ++ + V + I +
Sbjct: 169 ENRPMWKTTPLRIGLTMLMMVTSMVSIVIVVFTGPLADRTSQILGLGHTAFTIWSIVKWP 228
Query: 184 ATMLALFIGLIFVHLFLPAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + ++ + P + I PG + + W+V + F YI F++Y+
Sbjct: 229 VLVFLVAAMIVLLFWAAPKTHGVRRFRWISPGSLLAVVLWLVLSTGFATYIANFASYNKT 288
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y +A ++ L++L++ + +LG E + + +
Sbjct: 289 YGTVAGVIVFLLWLWLSNLAILLGLEFDVELTAEH 323
>gi|222087339|ref|YP_002545876.1| ribonuclease protein [Agrobacterium radiobacter K84]
gi|221724787|gb|ACM27943.1| ribonuclease protein [Agrobacterium radiobacter K84]
Length = 310
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 145/279 (51%), Positives = 206/279 (73%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++ ++YDA+ HFVE+DG+AMASH++LS LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPTFVRALYKVVYDAVFHFVEDDGFAMASHVALSTLLAVFPFLIFGTALASFLGASQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F WPE IAKP+ D+++QVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAVHLIFDTWPEAIAKPVADQVVQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY RL S GYVL+A + ++S + VA+PLAL Y R++ P L ++L ++++
Sbjct: 121 RVPETRPWYFNRLASLGYVLIAVLIFALLSILLVAVPLALNYTRQWLPGLADILDVVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T+ L GL+ +HL+L A + ++ ++PGV T + W +GA+LF +Y+ TF+ Y+
Sbjct: 181 RIYGTIFLLVAGLLILHLWLAAGRRRLFDVIPGVFLTLVFWSIGALLFAYYLSTFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYML V FI+GAE+NA+++ + R+
Sbjct: 241 TYAGLASVMIVLIFLYMLAVIFIMGAEINAALMKFKVRR 279
>gi|119469197|ref|ZP_01612181.1| putative ribonuclease protein [Alteromonadales bacterium TW-7]
gi|119447449|gb|EAW28717.1| putative ribonuclease protein [Alteromonadales bacterium TW-7]
Length = 317
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 111/268 (41%), Gaps = 8/268 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+DI +++ +++ ++ ALL++FP I ++ + + + +
Sbjct: 21 WWDIAKRIFARMSKDNLSLVSAGVAFYALLAIFPAIAALVSIYAYFASPAEISEHLRQFT 80
Query: 68 GAWPEVIAKPITDEILQVLAVPAK---GLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + I +I ++ + L + SS G +AL + N +Y E
Sbjct: 81 TLIPNSSRELILSQISELTQSSQARLTLGALGTLLLTIWSSSKGSQALITACNISYHEYE 140
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ + + F + + A + + + +P+ L V ++ L+I
Sbjct: 141 KRSFLRAQFVRFMFSVGAILVAIFALLIIGILPIVLNLV----GLKDSIDLLIKVVSWPI 196
Query: 185 TMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L L+ ++ + P K+ K I G + W++ ++ F+ Y+ FS+Y+ Y
Sbjct: 197 LALKFNFALVLLYRYAPHRKAAKWRWITLGSAIATVFWIIASIGFSFYVSRFSSYNETYG 256
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
L ++ L++LY+ +GA +NA
Sbjct: 257 SLGGVVIMLMWLYISAYIVTMGAVINAE 284
>gi|326571351|gb|EGE21368.1| putative ribonuclease BN [Moraxella catarrhalis BC8]
Length = 500
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 105/275 (38%), Gaps = 6/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
F + + HF+++D A+ ++ + LL++ P + + + A V +
Sbjct: 15 WFMYLRLLVRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTI 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
++ + I A + L + + + + + N+ +RV E
Sbjct: 75 SANLFPTASEQVAGYIRSF-AEKSSNLGLVGVAGLFVTAIMTLNTIEYAFNKIWRVQERS 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + + L V L + AI R+ + ++
Sbjct: 134 GGAASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYGID----WGIWAYLVSL 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G I ++ F+P A+ I + I T I + +F + F++Y +Y A
Sbjct: 190 ALMTCGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVMTNFTSYEAIYGAFA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 250 ALPIFLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|71737082|ref|YP_273727.1| ribonuclease BN [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71557635|gb|AAZ36846.1| ribonuclease BN, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|320325401|gb|EFW81466.1| ribonuclease BN, putative [Pseudomonas syringae pv. glycinea str.
B076]
Length = 322
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|310659169|ref|YP_003936890.1| integral inner membrane protein with ribonuclease fold [Clostridium
sticklandii DSM 519]
gi|308825947|emb|CBH21985.1| putative integral inner membrane protein with ribonuclease fold
[Clostridium sticklandii]
Length = 319
Score = 151 bits (382), Expect = 8e-35, Method: Composition-based stats.
Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++I + + F ++ ++ LLSVFPF++F L GFL V ++I +
Sbjct: 17 LKNLILELPKRFARDNISQTGGQLAYFFLLSVFPFLIFLNALLGFLNIS--VESIIREIS 74
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I + + V+ L +I LA+ + +S V++L I+LN AY V R+
Sbjct: 75 AIAPEEIVVLLRGYLESVVETRNTSLLSIGLLASLFSASKAVDSLIIALNTAYDVENKRN 134
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + +S + L+ +VI + + FF ++ + R
Sbjct: 135 FITKKAVSIFFTLILGFAIVISLLLPALGKNVAFLIADFFRISNIIVFVWVYIRWVIVFF 194
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LFI + ++ +P + LPG F SW++ + F Y+ F+ YS +Y + +
Sbjct: 195 ILFITIALLYHIVPYVNQPFKNSLPGTFFAVTSWLLVSYGFGIYVNNFANYSAVYGSIGA 254
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ + +LY+ G+ +LG E+N + YY K
Sbjct: 255 VIALMFWLYLTGIILVLGGEINDILYRYYEATK 287
>gi|126453311|ref|YP_001065978.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1106a]
gi|167846011|ref|ZP_02471519.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei B7210]
gi|242317688|ref|ZP_04816704.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1106b]
gi|126226953|gb|ABN90493.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1106a]
gi|242140927|gb|EES27329.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1106b]
Length = 437
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLLAAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 244 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|209546746|ref|YP_002278664.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209537990|gb|ACI57924.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 359
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 118/277 (42%), Gaps = 6/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ D+ + + + +A+ ++ LL++FP + +L G + + +
Sbjct: 60 LSGLRDVFWRVYHEVLNDRVTLIAAGVTFYLLLALFPAMAALVSLYGLVADPVTISEHLR 119
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYR 121
+ G P + D+I ++++ L A + + +G A+ ++N AY
Sbjct: 120 ELAGLLPPGAFDLLADQIKELVSKRESALGITFFVGLGIALWSTHSGTLAIFDAMNVAYE 179
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R L+ + L A + V+M + +P+ L+Y+ LL+ W
Sbjct: 180 ENEKRGLIRLNLVGLCFTLSAMLLTVVMVALVGVMPVVLSYLWLDQFKEHMALLLRWPLL 239
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +A+ F PA K+ + G T ++W ++ F+ Y+ F+ Y+
Sbjct: 240 LLVVAVAVTSVYRFGPSREPA---KLRWMTWGAALTTVAWAAMSLGFSFYLDHFANYNAT 296
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ L+++++ V ++GAELNA + R
Sbjct: 297 YGTLGALIGFLIWIWLSVVILVIGAELNAELEHQTAR 333
>gi|330949876|gb|EGH50136.1| ribonuclease BN [Pseudomonas syringae Cit 7]
Length = 322
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|296113710|ref|YP_003627648.1| putative ribonuclease BN [Moraxella catarrhalis RH4]
gi|295921404|gb|ADG61755.1| putative ribonuclease BN [Moraxella catarrhalis RH4]
gi|326562819|gb|EGE13114.1| putative ribonuclease BN [Moraxella catarrhalis 46P47B1]
gi|326563460|gb|EGE13723.1| putative ribonuclease BN [Moraxella catarrhalis 103P14B1]
gi|326570644|gb|EGE20680.1| putative ribonuclease BN [Moraxella catarrhalis BC7]
gi|326572954|gb|EGE22933.1| putative ribonuclease BN [Moraxella catarrhalis CO72]
gi|326573770|gb|EGE23727.1| putative ribonuclease BN [Moraxella catarrhalis 101P30B1]
gi|326574808|gb|EGE24742.1| putative ribonuclease BN [Moraxella catarrhalis O35E]
Length = 500
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 105/275 (38%), Gaps = 6/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
F + + HF+++D A+ ++ + LL++ P + + + A V +
Sbjct: 15 WFMYLRLLVRHFIDDDTQQKAASLTYTTLLALVPILTVVLVIFSSVPALEGLREQVQQTI 74
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
++ + I A + L + + + + + N+ +RV E
Sbjct: 75 SANLFPTASEQVAGYIRSF-AEKSSNLGLVGVAGLFVTAIMTLNTIEYAFNKIWRVQERS 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + + L V L + AI R+ + ++
Sbjct: 134 GGAASIIRYWTIITLGPVILGVAFGASSAIQSMDFLNRQIAGYGID----WGIWAYLVSL 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G I ++ F+P A+ I + I T I + +F + F++Y +Y A
Sbjct: 190 ALMTCGFILLYWFIPKAQVPIKNAAIAGIVTAILFESIKQVFGTVMTNFTSYEAIYGAFA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ L++LY+ +LG +++ ++ I+ ++ P
Sbjct: 250 ALPIFLLWLYISWNLILLGVQISYTLTIFDTKEVP 284
>gi|66047009|ref|YP_236850.1| ribonuclease BN [Pseudomonas syringae pv. syringae B728a]
gi|63257716|gb|AAY38812.1| Ribonuclease BN [Pseudomonas syringae pv. syringae B728a]
Length = 321
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|330971090|gb|EGH71156.1| ribonuclease BN [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 321
Score = 151 bits (382), Expect = 9e-35, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|167719878|ref|ZP_02403114.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei DM98]
Length = 437
Score = 151 bits (382), Expect = 1e-34, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 96/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSMSSYLFTKSLAIAGSTSTPPVFEWLLAAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 244 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|315125588|ref|YP_004067591.1| ribonuclease protein [Pseudoalteromonas sp. SM9913]
gi|315014101|gb|ADT67439.1| ribonuclease protein [Pseudoalteromonas sp. SM9913]
Length = 315
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 116/275 (42%), Gaps = 8/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+DI ++ ++ +A+ ++ ALL++FP I ++ + + + +
Sbjct: 18 LRGWWDITRRIVKQMSRDNLSLVAAGVAFYALLAIFPAIAALVSVYAYFTSPNDISVYLS 77
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYR 121
P+ + I ++ + L + L + SS G +AL + N +Y
Sbjct: 78 QFMALLPQSTQEIILSQVSSLAQKSQTSLSLSALGTLLLTIWSSSKGSQALITACNISYH 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS+ +L+ + + A V VI + +PLAL + ++ +I
Sbjct: 138 EYEKRSFLKAQLVRLLFSVGAIVVAVIALVIIGILPLALNLL----GIKESIDFLIMLIS 193
Query: 182 IYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L L+ ++ + P K+ K + G + W+V + F+ Y+ F++Y+
Sbjct: 194 WPLLALTFNFALLILYRYAPHRKAAKWRWVTVGSFTATVLWIVASFGFSFYVSHFASYNE 253
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L ++ L++L++ ILGA +NA++
Sbjct: 254 TYGSLGGVVIMLMWLFISAYIIILGATINAALEQQ 288
>gi|160882656|ref|ZP_02063659.1| hypothetical protein BACOVA_00609 [Bacteroides ovatus ATCC 8483]
gi|237718430|ref|ZP_04548911.1| ribonuclease BN [Bacteroides sp. 2_2_4]
gi|260173878|ref|ZP_05760290.1| ribonuclease BN [Bacteroides sp. D2]
gi|293371424|ref|ZP_06617855.1| YihY family protein [Bacteroides ovatus SD CMC 3f]
gi|299149076|ref|ZP_07042138.1| YihY family protein [Bacteroides sp. 3_1_23]
gi|315922141|ref|ZP_07918381.1| ribonuclease BN [Bacteroides sp. D2]
gi|156111971|gb|EDO13716.1| hypothetical protein BACOVA_00609 [Bacteroides ovatus ATCC 8483]
gi|229452363|gb|EEO58154.1| ribonuclease BN [Bacteroides sp. 2_2_4]
gi|292633621|gb|EFF52179.1| YihY family protein [Bacteroides ovatus SD CMC 3f]
gi|298513837|gb|EFI37724.1| YihY family protein [Bacteroides sp. 3_1_23]
gi|313696016|gb|EFS32851.1| ribonuclease BN [Bacteroides sp. D2]
Length = 439
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 97/275 (35%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +Y I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTVYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E ++ + + + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNTETTEAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIWE 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L L ++
Sbjct: 148 VKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFMSTILK----QMDDFVLLAPVMKFMI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPLFLLWLQISWTICLFGAELTYAGQNIR 298
>gi|116249043|ref|YP_764884.1| ribonuclease domain-containing protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115253693|emb|CAK12086.1| putative transmembrane ribonuclease domain protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 359
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 119/277 (42%), Gaps = 6/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ + + + +A+ ++ LL++FP + +L G + + +
Sbjct: 60 FSGLRDVFWRVFHEVLADRVTLIAAGVTFYLLLALFPAMAALVSLYGLVADPATISEHLR 119
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYR 121
+ G P + ++I +++ L A + + +G A+ ++N AY
Sbjct: 120 ELAGLMPSGAFDLLANQIKELVDRRDATLGITFFVGLGIALWSTHSGTLAIFDAMNVAYE 179
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R LI + L A + V+M + +P+ L+Y+ LL+ W
Sbjct: 180 EEEKRGLIRLNLIGLCFTLCAMLLTVVMVALVGVMPVVLSYLWLDQFKEHMALLLRWPLL 239
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +A+ F PA K+ + G + T ++W ++ F++Y+ F+ Y+
Sbjct: 240 LLVVAVAVTSVYRFGPSREPA---KLRWMTWGAVLTTVAWTAMSLGFSYYLDHFANYNAT 296
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ L+++++ V I+G ELNA + +
Sbjct: 297 YGTLGALIGFLIWIWLSVVILIVGGELNAELEHQTAK 333
>gi|113968660|ref|YP_732453.1| ribonuclease BN [Shewanella sp. MR-4]
gi|123325453|sp|Q0HNH1|Y316_SHESM RecName: Full=UPF0761 membrane protein Shewmr4_0316
gi|113883344|gb|ABI37396.1| tRNA-processing RNAse BN [Shewanella sp. MR-4]
Length = 337
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 104/276 (37%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F ++ + + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IQVLFLGIWRFLLHLRQRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEAFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + L
Sbjct: 129 WRTKEKRSVVVAFSMYWMVITLGPVLVGASLVATSYVVSLKLFEGDALSGVMPL------ 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + +++ +P K K L G + + + +G F Y+ F +Y
Sbjct: 183 FIERLPLFFSVAAFLLLYMVVPNQKVKFWHALLGAVVAALLFELGKKGFALYVTKFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|167824475|ref|ZP_02455946.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 9]
gi|167911227|ref|ZP_02498318.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 112]
gi|226192934|ref|ZP_03788546.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei Pakistan
9]
gi|254198157|ref|ZP_04904579.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei S13]
gi|254297859|ref|ZP_04965312.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 406e]
gi|157807649|gb|EDO84819.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 406e]
gi|169654898|gb|EDS87591.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei S13]
gi|225935024|gb|EEH30999.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei Pakistan
9]
Length = 437
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLLAAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 244 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|256376128|ref|YP_003099788.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
gi|255920431|gb|ACU35942.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
Length = 306
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 97/273 (35%), Gaps = 2/273 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ F E+ A+ ++ A+LS+FP V + T++D
Sbjct: 14 RSWWAVLKRTAAEFTEDGLMDRAAALTYYAVLSLFPG-VLLLTGLLGILGPDAKQTLVDS 72
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + + A + A + +S V A + N Y V E
Sbjct: 73 LSALGPGPARDILIQALDSLRPSVAGPVAIFGLATALWSASGYVGAFMRAANAIYEVDEG 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + L V L +++ +V + + +
Sbjct: 133 RPLWKVLPLRVLLTLGVVVLLALVAAGTALTGDVAVWVGDLVGLGREAVAVWDLAKWPVL 192
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + ++ P + + I PG + + WV+ + F Y +Y Y
Sbjct: 193 LLLASAAIGLLYWASPNVRQPGWLWITPGGLLAVLLWVIASFGFGFYATHAGSYDKTYGP 252
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA ++ LV+L++ + +LGAEL+A +
Sbjct: 253 LAGVVVFLVWLWISNIALLLGAELDAELERGRR 285
>gi|134282352|ref|ZP_01769057.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 305]
gi|134246390|gb|EBA46479.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 305]
Length = 437
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLLAAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 244 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|298484069|ref|ZP_07002237.1| YihY family protein [Bacteroides sp. D22]
gi|295087661|emb|CBK69184.1| tRNA-processing RNAse BN [Bacteroides xylanisolvens XB1A]
gi|298269750|gb|EFI11343.1| YihY family protein [Bacteroides sp. D22]
Length = 439
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E ++ + + + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNIETTEAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIWE 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L L I+
Sbjct: 148 VKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFMSTILK----QMDDFVLLAPIMKFMI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPLFLLWLQISWTICLFGAELTYAGQNIR 298
>gi|190893623|ref|YP_001980165.1| ribonuclease [Rhizobium etli CIAT 652]
gi|190698902|gb|ACE92987.1| putative ribonuclease protein [Rhizobium etli CIAT 652]
Length = 307
Score = 151 bits (381), Expect = 1e-34, Method: Composition-based stats.
Identities = 152/279 (54%), Positives = 210/279 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYM+GV FI+GAE+NA++I + +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFRVFR 279
>gi|311067277|ref|YP_003972200.1| YfkH protein [Bacillus atrophaeus 1942]
gi|310867794|gb|ADP31269.1| YfkH [Bacillus atrophaeus 1942]
Length = 279
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 2/268 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D I + F +G + ++ ++ LLS+FPF++F LA +L V+ VV
Sbjct: 2 DFIKELFGRFTLHEGQSKSAELAYFFLLSLFPFMIFILTLAAYLPLTS--DDVLGVVDQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ I Q L GL + +AA + +SNG+ A+ + N AY V E RS+
Sbjct: 60 APDGAMSLIQSITEQTLNNRNGGLLSFGIIAALWSASNGMNAIVRAFNHAYEVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + T+++ + V +F A L + R + L L
Sbjct: 120 IVRLTSIFLTIGMVFTILVALLLPVFGKQIGLLTAEFVGASDMFLAVWAAVRWGISPLIL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++LF P K + + PG +F I W+ + LF+ Y+ T++ YS Y + I+
Sbjct: 180 LIVFSALYLFAPNKKLSLRFVFPGALFATIGWIAVSTLFSFYVGTYANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G+ ILG E+NA +
Sbjct: 240 VLMIWFYLSGILIILGGEINALLHKRKK 267
>gi|21283552|ref|NP_646640.1| hypothetical protein MW1823 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486701|ref|YP_043922.1| hypothetical protein SAS1805 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297208908|ref|ZP_06925313.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300913034|ref|ZP_07130472.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|21204993|dbj|BAB95688.1| MW1823 [Staphylococcus aureus subsp. aureus MW2]
gi|49245144|emb|CAG43610.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296886469|gb|EFH25397.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300885812|gb|EFK81019.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH70]
Length = 403
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 70 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 126
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 127 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 186
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 187 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 246
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 247 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 306
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 307 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 336
>gi|254252578|ref|ZP_04945896.1| hypothetical protein BDAG_01812 [Burkholderia dolosa AUO158]
gi|124895187|gb|EAY69067.1| hypothetical protein BDAG_01812 [Burkholderia dolosa AUO158]
Length = 490
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 55 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 114
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 115 GFLADHLMPAQFNTQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 174
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L + + L + + + + + + ++ +
Sbjct: 175 KPRPLAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAAQSTSIVEWLLTLASLP 234
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 235 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 290
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 291 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 323
>gi|237811990|ref|YP_002896441.1| ribonuclease BN [Burkholderia pseudomallei MSHR346]
gi|254188565|ref|ZP_04895076.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei Pasteur
52237]
gi|157936244|gb|EDO91914.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei Pasteur
52237]
gi|237504360|gb|ACQ96678.1| ribonuclease BN [Burkholderia pseudomallei MSHR346]
Length = 437
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLLAAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 244 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|53725418|ref|YP_102669.1| ribonuclease BN [Burkholderia mallei ATCC 23344]
gi|67642692|ref|ZP_00441445.1| ribonuclease BN [Burkholderia mallei GB8 horse 4]
gi|76810568|ref|YP_333263.1| ribonuclease BN [Burkholderia pseudomallei 1710b]
gi|121598821|ref|YP_992806.1| ribonuclease BN [Burkholderia mallei SAVP1]
gi|126440631|ref|YP_001058726.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 668]
gi|167002924|ref|ZP_02268714.1| tRNA-processing ribonuclease BN [Burkholderia mallei PRL-20]
gi|167738880|ref|ZP_02411654.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 14]
gi|167816103|ref|ZP_02447783.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 91]
gi|167894585|ref|ZP_02481987.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 7894]
gi|167902987|ref|ZP_02490192.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei NCTC
13177]
gi|167919248|ref|ZP_02506339.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei BCC215]
gi|217423574|ref|ZP_03455075.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 576]
gi|254178581|ref|ZP_04885236.1| tRNA-processing ribonuclease BN [Burkholderia mallei ATCC 10399]
gi|254180025|ref|ZP_04886624.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1655]
gi|254199606|ref|ZP_04905972.1| tRNA-processing ribonuclease BN [Burkholderia mallei FMH]
gi|254205924|ref|ZP_04912276.1| tRNA-processing ribonuclease BN [Burkholderia mallei JHU]
gi|254258987|ref|ZP_04950041.1| ribonuclease BN [Burkholderia pseudomallei 1710a]
gi|52428841|gb|AAU49434.1| ribonuclease BN [Burkholderia mallei ATCC 23344]
gi|76580021|gb|ABA49496.1| ribonuclease BN [Burkholderia pseudomallei 1710b]
gi|121227631|gb|ABM50149.1| ribonuclease BN [Burkholderia mallei SAVP1]
gi|126220124|gb|ABN83630.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 668]
gi|147749202|gb|EDK56276.1| tRNA-processing ribonuclease BN [Burkholderia mallei FMH]
gi|147753367|gb|EDK60432.1| tRNA-processing ribonuclease BN [Burkholderia mallei JHU]
gi|160699620|gb|EDP89590.1| tRNA-processing ribonuclease BN [Burkholderia mallei ATCC 10399]
gi|184210565|gb|EDU07608.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 1655]
gi|217393432|gb|EEC33453.1| tRNA-processing ribonuclease BN [Burkholderia pseudomallei 576]
gi|238523880|gb|EEP87316.1| ribonuclease BN [Burkholderia mallei GB8 horse 4]
gi|243061470|gb|EES43656.1| tRNA-processing ribonuclease BN [Burkholderia mallei PRL-20]
gi|254217676|gb|EET07060.1| ribonuclease BN [Burkholderia pseudomallei 1710a]
Length = 437
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLLAAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 244 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|239983428|ref|ZP_04705952.1| ribonuclease BN family membrane protein [Streptomyces albus J1074]
Length = 297
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 101/268 (37%), Gaps = 4/268 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F +++ A+ ++ +L++FP ++ +L G G V++ + P
Sbjct: 2 LRRTVAEFQDDELADRAAALTYYGVLALFPGLLVLVSLLGVAG-ESTTRRVLESIKKMAP 60
Query: 72 EVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+T + V G L + LAA + +S V A S N Y + E R +
Sbjct: 61 GPARDVVTSAVEGVQGAGGVGSLLAVVGVLAALWSASGYVGAFIRSSNAVYDMPEGRPVW 120
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ G + V V + + V L + + +L +
Sbjct: 121 KVLPVRVGTTVALVVMAVGSALIVVFTGDLARRAGSLLGIGDTALTVWSIAKWPVLLLLV 180
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + P K + PG + W++ + F Y+ F +Y+ Y LA +
Sbjct: 181 IGMIALLFWAAPNTKGPGFRWVTPGSFLALVIWLLASAGFAVYVANFGSYNKTYGALAGV 240
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ LV+L++ + +LG E +A +
Sbjct: 241 VVFLVWLWISNIAILLGLEFDAELARER 268
>gi|311032903|ref|ZP_07710993.1| putative Ribonuclease BN [Bacillus sp. m3-13]
Length = 286
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 114/270 (42%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + ++ +A+ + +LS+FP +V ++ +L VI+ +
Sbjct: 3 RLVKFLKRLGLEMKKDRATGLAAEQAYYYMLSLFPLLVLALSIIPYLNIDP--QKVIEFL 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I + + P GL T L + +SNG+ A ++N A+ V E R
Sbjct: 61 QTMMPPETIAVFEENINEFVNKPNGGLLTFGILGTIWSASNGMNAFISAMNEAFNVEESR 120
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+Y+ RL+S G + +I F+ V + + + G+ +I+ R
Sbjct: 121 PFYLVRLLSIGLTIGLIFAFLIAFFLPVFGGIIIKQLESVIYIPGSTAIILNILRFIIAF 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+F + ++ P +LPG I + W + ++ F+ Y+ F YS Y L
Sbjct: 181 FVIFTIIAVLYRIAPDISKSFKQLLPGAIVATVIWQLVSLGFSFYVSNFGNYSATYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ +++L++ G+ ++G E+NA
Sbjct: 241 GVIILMLWLFLTGLALVIGGEINAIFHKNR 270
>gi|227535434|ref|ZP_03965483.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227186917|gb|EEI66984.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 349
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ AI E + A+ ++ LLS+FP I+F AN + G + + A
Sbjct: 56 FVKLAINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGL--TYKGLAAYLTQAI 113
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I +L + GL I A+A + +S GV L++ N+ Y V +++ I
Sbjct: 114 PSNVMNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFII 173
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL+S + + + VF L ++ + L R T+ ALF
Sbjct: 174 QRLLSMLMTFTLIIVMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTITALF 233
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + + +
Sbjct: 234 VIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGTFIA 293
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L + + GA +NA Y+ +
Sbjct: 294 IMLWLNFSALVLLWGAVINALTAEYFIGR 322
>gi|118581183|ref|YP_902433.1| putative ribonuclease BN [Pelobacter propionicus DSM 2379]
gi|118503893|gb|ABL00376.1| tRNA-processing RNAse BN [Pelobacter propionicus DSM 2379]
Length = 417
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 110/276 (39%), Gaps = 6/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + Y F G A+ ++ + +LS+ P + + LGA +
Sbjct: 1 MKGRLFDLLRFCYLVRAGFSLHQGALRAAALTYTTMLSLVPVLAIAFAVLKGLGAQNTLE 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + + I+ + V K + I L + + + ++ N +
Sbjct: 61 P----VLQRFAGDSQETISRIVAYVNNTNFKSIGAIGLLVLVMTVISLLGNIEMAFNTIW 116
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E RS V++ + +++ + + ++ +V K+ L + +
Sbjct: 117 GVRETRSLQRRFSDYLSVVVVGPILILVATSMTTSLQN--QWVVKWLLLHEYLGEAVLSV 174
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++++I L+F+++++P + + S L G I +W + + H+ V + Y+
Sbjct: 175 FRLSPYVSVWIALVFLYIYIPNTRVRFRSALLGGILAGTAWQMAQWAYFHFQVGVANYNA 234
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y LA++ LV++Y + +LG E+
Sbjct: 235 IYGTLAALPVFLVWVYTSWLIVLLGLEIVCIHQRRR 270
>gi|258451051|ref|ZP_05699087.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|257861293|gb|EEV84105.1| conserved hypothetical protein [Staphylococcus aureus A5948]
Length = 405
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSIISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|57652102|ref|YP_186766.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus COL]
gi|57286288|gb|AAW38382.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus COL]
Length = 405
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|15927457|ref|NP_374990.1| hypothetical protein SA1699 [Staphylococcus aureus subsp. aureus
N315]
gi|87160245|ref|YP_494516.1| hypothetical protein SAUSA300_1864 [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|88195779|ref|YP_500588.1| hypothetical protein SAOUHSC_02097 [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|148268355|ref|YP_001247298.1| ribonuclease BN [Staphylococcus aureus subsp. aureus JH9]
gi|150394417|ref|YP_001317092.1| ribonuclease BN [Staphylococcus aureus subsp. aureus JH1]
gi|151222033|ref|YP_001332855.1| ribonuclease BN [Staphylococcus aureus subsp. aureus str. Newman]
gi|161510102|ref|YP_001575761.1| ribonuclease BN [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141456|ref|ZP_03565949.1| hypothetical protein SauraJ_07428 [Staphylococcus aureus subsp.
aureus str. JKD6009]
gi|253729641|ref|ZP_04863806.1| ribonuclease BN [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257793763|ref|ZP_05642742.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258408905|ref|ZP_05681187.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258420991|ref|ZP_05683922.1| ribonuclease BN [Staphylococcus aureus A9719]
gi|258430037|ref|ZP_05688407.1| ribonuclease BN [Staphylococcus aureus A9299]
gi|258443445|ref|ZP_05691787.1| ribonuclease BN [Staphylococcus aureus A8115]
gi|258445303|ref|ZP_05693494.1| ribonuclease BN [Staphylococcus aureus A6300]
gi|258453300|ref|ZP_05701285.1| ribonuclease BN [Staphylococcus aureus A5937]
gi|269203535|ref|YP_003282804.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus
ED98]
gi|282894548|ref|ZP_06302776.1| hypothetical protein SGAG_01896 [Staphylococcus aureus A8117]
gi|282923219|ref|ZP_06330900.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282928055|ref|ZP_06335662.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|294849428|ref|ZP_06790170.1| hypothetical protein SKAG_01510 [Staphylococcus aureus A9754]
gi|295407261|ref|ZP_06817060.1| hypothetical protein SMAG_02434 [Staphylococcus aureus A8819]
gi|296275884|ref|ZP_06858391.1| hypothetical protein SauraMR_06032 [Staphylococcus aureus subsp.
aureus MR1]
gi|297246212|ref|ZP_06930063.1| hypothetical protein SLAG_02294 [Staphylococcus aureus A8796]
gi|304379067|ref|ZP_07361814.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|13701676|dbj|BAB42969.1| SA1699 [Staphylococcus aureus subsp. aureus N315]
gi|87126219|gb|ABD20733.1| putative membrane protein [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203337|gb|ABD31147.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|147741424|gb|ABQ49722.1| putative ribonuclease BN [Staphylococcus aureus subsp. aureus JH9]
gi|149946869|gb|ABR52805.1| putative ribonuclease BN [Staphylococcus aureus subsp. aureus JH1]
gi|150374833|dbj|BAF68093.1| ribonuclease BN [Staphylococcus aureus subsp. aureus str. Newman]
gi|160368911|gb|ABX29882.1| possible ribonuclease BN [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253726637|gb|EES95366.1| ribonuclease BN [Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|257787735|gb|EEV26075.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257840352|gb|EEV64814.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257842939|gb|EEV67357.1| ribonuclease BN [Staphylococcus aureus A9719]
gi|257849631|gb|EEV73599.1| ribonuclease BN [Staphylococcus aureus A9299]
gi|257851330|gb|EEV75270.1| ribonuclease BN [Staphylococcus aureus A8115]
gi|257855821|gb|EEV78745.1| ribonuclease BN [Staphylococcus aureus A6300]
gi|257864508|gb|EEV87251.1| ribonuclease BN [Staphylococcus aureus A5937]
gi|262075825|gb|ACY11798.1| ribonuclease BN, putative [Staphylococcus aureus subsp. aureus
ED98]
gi|269941354|emb|CBI49751.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282590119|gb|EFB95200.1| conserved hypothetical protein [Staphylococcus aureus A10102]
gi|282593130|gb|EFB98129.1| conserved hypothetical protein [Staphylococcus aureus A9765]
gi|282763035|gb|EFC03167.1| hypothetical protein SGAG_01896 [Staphylococcus aureus A8117]
gi|285817563|gb|ADC38050.1| Ribonuclease BN [Staphylococcus aureus 04-02981]
gi|294823565|gb|EFG39992.1| hypothetical protein SKAG_01510 [Staphylococcus aureus A9754]
gi|294967836|gb|EFG43866.1| hypothetical protein SMAG_02434 [Staphylococcus aureus A8819]
gi|297176919|gb|EFH36176.1| hypothetical protein SLAG_02294 [Staphylococcus aureus A8796]
gi|302751755|gb|ADL65932.1| putative membrane protein [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304342302|gb|EFM08194.1| YihY family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312830255|emb|CBX35097.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129310|gb|EFT85304.1| hypothetical protein CGSSa03_08610 [Staphylococcus aureus subsp.
aureus CGS03]
gi|315196045|gb|EFU26405.1| hypothetical protein CGSSa01_12032 [Staphylococcus aureus subsp.
aureus CGS01]
gi|320139739|gb|EFW31608.1| YihY family protein [Staphylococcus aureus subsp. aureus MRSA131]
gi|320142345|gb|EFW34159.1| YihY family protein [Staphylococcus aureus subsp. aureus MRSA177]
gi|329314559|gb|AEB88972.1| Ribonuclease BN [Staphylococcus aureus subsp. aureus T0131]
gi|329724799|gb|EGG61303.1| YihY family protein [Staphylococcus aureus subsp. aureus 21172]
gi|329728613|gb|EGG65043.1| YihY family protein [Staphylococcus aureus subsp. aureus 21189]
Length = 405
Score = 150 bits (380), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|237712832|ref|ZP_04543313.1| ribonuclease BN [Bacteroides sp. D1]
gi|262408811|ref|ZP_06085356.1| ribonuclease BN [Bacteroides sp. 2_1_22]
gi|294648195|ref|ZP_06725735.1| YihY family protein [Bacteroides ovatus SD CC 2a]
gi|294810773|ref|ZP_06769421.1| YihY family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229447160|gb|EEO52951.1| ribonuclease BN [Bacteroides sp. D1]
gi|262353022|gb|EEZ02117.1| ribonuclease BN [Bacteroides sp. 2_1_22]
gi|292636470|gb|EFF54948.1| YihY family protein [Bacteroides ovatus SD CC 2a]
gi|294442106|gb|EFG10925.1| YihY family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 439
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E ++ + + + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNIETTEAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIWE 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L L I+
Sbjct: 148 VKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFMSTILK----QMDDFVLLAPIMKFMI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPLFLLWLQISWTICLFGAELTYAGQNIR 298
>gi|167836869|ref|ZP_02463752.1| YihY family protein [Burkholderia thailandensis MSMB43]
Length = 437
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 94/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVVTAVMMMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTKSLAFTGSTSMPPIFEWLLAAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 244 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 276
>gi|294142884|ref|YP_003558862.1| ribonuclease BN [Shewanella violacea DSS12]
gi|293329353|dbj|BAJ04084.1| ribonuclease BN [Shewanella violacea DSS12]
Length = 366
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 103/275 (37%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVV 66
++ + + E+ A H++ LLS+ P + ++ + + +
Sbjct: 45 IWHFMVHLKQRLAEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFSEIRGQIESFI 104
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + + I + + +KG + A + + + S+N +R E R
Sbjct: 105 YENFLPSAGDSVQVYINEFVDNASKG-TAVGIAALMVVAIMLISNIDKSINSIWRTTEKR 163
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S ++ + + + L V + + + +L ++ M
Sbjct: 164 SMVVSFSMYWMVLTLGPVLMGASLVATSYVVSLKVFNGA------DLTGVVPLLVERLPM 217
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +++ +P K K L G I + + G F Y+ F +Y +Y LA
Sbjct: 218 FFSVATFLLIYMVVPNTKVKFFHALLGAIAAALLFEFGKKGFAFYLTQFPSYEAIYGALA 277
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+I +++Y+ + ++GAE+ A++ Y +K P
Sbjct: 278 TIPILFMWVYLSWMIVLIGAEITAALPEYLDKKLP 312
>gi|150391950|ref|YP_001321999.1| putative ribonuclease BN [Alkaliphilus metalliredigens QYMF]
gi|149951812|gb|ABR50340.1| putative ribonuclease BN [Alkaliphilus metalliredigens QYMF]
Length = 276
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 125/276 (45%), Gaps = 2/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + +++ F +++ A+ + IS +LS FPF++F L G++ + +
Sbjct: 3 FRRIKEVLLHLYNQFDKDEVPALGAQISYYLILSFFPFLIFLIVLIGYIPLTE--ERTLY 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + + IL++ L + L + +S G A+ +N+AY V E
Sbjct: 61 ELALILPHDAYSLVEEIILEITTADNTTLISFGMLGTLWTASRGTSAMIRGMNKAYNVKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ + + + + ++ + V L + L R
Sbjct: 121 DRPFWKVAGMGVIFTIGLAFMILFSLTLLVFGQLLGEMLINQLNLSTLLEPTWRLVRYGV 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+LALF ++LF P K+ +I G +F+ + WVV ++ F +Y+ F Y+ +Y
Sbjct: 181 ALLALFSTFTLLYLFGPNYHLKLKNIYWGALFSTVGWVVISLGFAYYVNNFGNYTRVYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +M L++LY+ + ++GAE+N+++ ++ R K
Sbjct: 241 IGGVMILLIWLYLSSLIVLMGAEVNSTIWVFSKRGK 276
>gi|29346725|ref|NP_810228.1| ribonuclease BN [Bacteroides thetaiotaomicron VPI-5482]
gi|29338622|gb|AAO76422.1| ribonuclease BN [Bacteroides thetaiotaomicron VPI-5482]
Length = 439
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 97/275 (35%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +Y I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTVYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E ++ + + + + N V + I+ NR +
Sbjct: 88 QFRSGFGGNTETTEAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIWE 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L L ++
Sbjct: 148 VKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFVSTVLK----QMDDFVLLAPVMKFSI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPLFLLWLQISWTICLFGAELTYAGQNIR 298
>gi|15924873|ref|NP_372407.1| transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|156980199|ref|YP_001442458.1| hypothetical protein SAHV_1868 [Staphylococcus aureus subsp. aureus
Mu3]
gi|255006671|ref|ZP_05145272.2| hypothetical protein SauraM_09385 [Staphylococcus aureus subsp.
aureus Mu50-omega]
gi|14247655|dbj|BAB58045.1| similar to transporter [Staphylococcus aureus subsp. aureus Mu50]
gi|156722334|dbj|BAF78751.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 405
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVICDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|229918098|ref|YP_002886744.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229469527|gb|ACQ71299.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 317
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 120/274 (43%), Gaps = 4/274 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ F E D + ++ LS+FP I+F L F Q + +
Sbjct: 10 KNWLSFGKELFRRFQEHDVQDYGATLAFFWFLSIFPGIIFILALLSFFDVSQ--DSFQNQ 67
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P A I + + P GL ++ A+ A + ++ GV+ L + AY
Sbjct: 68 LNDLAPGSAASGFLTGIFEAIGEPRGGLLSLGAILAIWSAAKGVDRLITTSLHAYGEDNE 127
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIY 183
R++++ + ++ G +L + ++++ V +++V ++ P ++I R
Sbjct: 128 RNFFVKKGLALGLTILLGIGMLLLILSNVFGSQIISFVTEYLPVNITGAEEMMINVFRYV 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T + L + L + P S +PG IF I W + + F+ Y+ F +Y + Y
Sbjct: 188 LTTVVLILTLSIFYKVSPQQHVFWKSTIPGAIFGVIGWQIVSFGFSLYVSNFGSYDSTYG 247
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L I+ L++L + G+ ++G+E+NA+ + ++
Sbjct: 248 SLGGIIVTLLWLQLTGMIILIGSEINATWMRFFK 281
>gi|253573082|ref|ZP_04850474.1| ribonuclease BN [Bacteroides sp. 1_1_6]
gi|251837339|gb|EES65438.1| ribonuclease BN [Bacteroides sp. 1_1_6]
Length = 439
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 97/275 (35%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E ++ + + + + N V + I+ NR +
Sbjct: 88 QFRSGFGGNIETTEAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIWE 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L L ++
Sbjct: 148 VKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFVSTVLK----QMDDFVLLAPVMKFMI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPLFLLWLQISWTICLFGAELTYAGQNIR 298
>gi|53719578|ref|YP_108564.1| putative tRNA processing exoribonuclease [Burkholderia pseudomallei
K96243]
gi|52209992|emb|CAH35965.1| putative tRNA processing exoribonuclease [Burkholderia pseudomallei
K96243]
Length = 434
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 5 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 64
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + + N +RV
Sbjct: 65 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVFTAVMMMMTIESAFNLIWRVR 124
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 125 KPRPFAQRVLAYWALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLLAAASLP 184
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 185 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 241 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 273
>gi|86748374|ref|YP_484870.1| ribonuclease BN, putative [Rhodopseudomonas palustris HaA2]
gi|86571402|gb|ABD05959.1| ribonuclease BN, putative [Rhodopseudomonas palustris HaA2]
Length = 356
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 115/267 (43%), Gaps = 8/267 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ +A+ + LL++FP I + + + +
Sbjct: 80 VLRGTYARINDDRLMLVAAGVVFYGLLALFPGISALVSSYALFTDGGTINGHLQQLAAIV 139
Query: 71 PEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE I D++ +VLA L S A + + GV+A+ + N Y E R
Sbjct: 140 PEGTYSVIEDQVGRVLANGETRLGLAFLSSLALALWSVNGGVKAVIDASNVVYDKQESRG 199
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +S G+ + A ++ + +A P+AL+ + ++I GR L
Sbjct: 200 FIKLNALSLGFTIGALAAVLSAIGLVIATPIALSMIGMEGQG----AVLIGYGRWPLLAL 255
Query: 188 ALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
F GL ++ P + +LPG +F ++W+VG+ L ++Y+ F+ Y Y L
Sbjct: 256 LTFAGLAVLYRHAPDRDTPHWRWVLPGCVFATLAWIVGSALLSYYLGNFANYDATYGSLG 315
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+ + +++++M + ++G ELNA +
Sbjct: 316 AAIGLMIWMWMTAIVVLVGGELNAEIE 342
>gi|170728937|ref|YP_001762963.1| ribonuclease BN [Shewanella woodyi ATCC 51908]
gi|226737458|sp|B1KLY8|Y4618_SHEWM RecName: Full=UPF0761 membrane protein Swoo_4618
gi|169814284|gb|ACA88868.1| ribonuclease BN [Shewanella woodyi ATCC 51908]
Length = 336
Score = 150 bits (379), Expect = 2e-34, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 106/274 (38%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVV 66
++ + + E+ A H++ +LLS+ P + ++ Q + + D +
Sbjct: 17 IWHFMIHLKQRLAEDQINIRAGHLAYVSLLSLVPMVAVTMSMLSAFPVFQGIRGQIEDFI 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + + I + + +KG + A + + ++ SLN + E R
Sbjct: 77 YNNFIPSAGDSVQVYINEFVDNASKG-TAVGIAALMVVAIMLISSIDKSLNSIWHTKEKR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S I+ + + + L V + + + +L ++ M
Sbjct: 136 SMVISFSMYWMVLTLGPVLMGASLVATSYVVSLKVFNGS------DLSGVVPLLVERLPM 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + +++ +P K K L G I + + G F Y+ F TY +Y LA
Sbjct: 190 LFSVATFLLIYMVVPNTKVKFFHALLGAIVAALMFEFGKKGFALYLTKFPTYEAIYGALA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+I +++Y+ + +LGA + A+M Y +K+
Sbjct: 250 TIPILFLWVYLSWMIVLLGAVITAAMPEYLDKKQ 283
>gi|293604640|ref|ZP_06687042.1| tRNA-processing ribonuclease BN [Achromobacter piechaudii ATCC
43553]
gi|292816971|gb|EFF76050.1| tRNA-processing ribonuclease BN [Achromobacter piechaudii ATCC
43553]
Length = 437
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 101/272 (37%), Gaps = 9/272 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF-- 67
+ ++ EE +AS ++ + +L++ P + +L Q ++
Sbjct: 30 RVFRFTLQRAGEEKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALEDFLTN 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ I + + Q A A L I S + + + N + V R
Sbjct: 90 SLMPPSVSDNIMEYLNQF-ARQASRLTAIGGAFLLVTSLLLIMTIDQAFNDIWHVSRQRP 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + + L V + + R+ + ++ +I + ++
Sbjct: 149 LPQRALVYWAIITLGPVLAGASLWATSFV------ARESLGLVSDVPEVISVVVSFIPLV 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+G + + +P + L G T I+ + F +Y+ F TY+ +Y A+
Sbjct: 203 LTGLGFAALFVVVPNREVLWRDALVGGFVTAIALEIMKSGFAYYLTRFPTYTIIYGAFAT 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L+++Y+ + +LGA L +S + +
Sbjct: 263 LPIFLLWIYLSWLAVLLGATLASSAPLIRLGR 294
>gi|299820568|ref|ZP_07052458.1| YihY family protein [Listeria grayi DSM 20601]
gi|299818063|gb|EFI85297.1| YihY family protein [Listeria grayi DSM 20601]
Length = 285
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 63/273 (23%), Positives = 132/273 (48%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
F + + + D A+ ++ L S+FP ++ L GFL + ++ +V
Sbjct: 10 FFRFVQLLLARMKKNDVTGNAAQLAYYMLFSIFPLLLVAVALLGFLNLDK--DSIFQMVE 67
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ I I + QVL+ + GL ++ LA + +SNG+ A+ +LN+AY +++ R+
Sbjct: 68 DFAPKQIIDFIQTNLDQVLSNRSGGLLSVGILATLWSASNGMAAVMKALNKAYGIIDRRN 127
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I +L+S + + VT+ I + V ++ ++ + R ++L
Sbjct: 128 FIIQKLLSVLFTVAMLVTVAITLVLLVFGQQIGDFLLHSLHMPSQVIDVWNGLRELLSVL 187
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + F++ F P K I ++LPG +F I W + ++ F Y+ F Y+ Y +
Sbjct: 188 VILVVFTFLYWFAPNRKGTIKTVLPGALFASIGWSLASIGFAFYVNNFGNYTATYGSIGI 247
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ +++ ++ G+ I+G ELN ++ +K+
Sbjct: 248 VIVLMLWFFLTGIILIVGGELNGTLAFIKQKKE 280
>gi|298386622|ref|ZP_06996178.1| YihY family protein [Bacteroides sp. 1_1_14]
gi|298260999|gb|EFI03867.1| YihY family protein [Bacteroides sp. 1_1_14]
Length = 439
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 97/275 (35%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E ++ + + + + N V + I+ NR +
Sbjct: 88 QFRSGFGGNIETTEAILSFVNSYLSQTKGGIFIGVGLVMLLWTVINLVSNIEITFNRIWE 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L L ++
Sbjct: 148 VKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFVSTVLK----QMDDFVLLAPVMKFMI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPLFLLWLQISWTICLFGAELTYAGQNIR 298
>gi|312962672|ref|ZP_07777161.1| ribonuclease BN [Pseudomonas fluorescens WH6]
gi|311283047|gb|EFQ61639.1| ribonuclease BN [Pseudomonas fluorescens WH6]
Length = 314
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 61/275 (22%), Positives = 125/275 (45%), Gaps = 1/275 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ ++ FV+++ AS ++ L S+FPF++F L GFL F +
Sbjct: 9 LKLHKVLARTVKEFVDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQ 68
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + I Q+ GL ++ + A + +S GV + ++N AY VVE
Sbjct: 69 SELVLPPQALEQVNPVIDQLQQSK-GGLLSVGIVIALWTASAGVRLMMSAMNAAYDVVEG 127
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + +S Y + + L+ + + V P + ++ ++ + R
Sbjct: 128 RPIWKRFPLSIFYTVGIAGMLLAAAALMVLGPQVMEWLAGQIGMQEFVVTLWTIVRWPLI 187
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ L + ++ +P + + I PG + + W+V ++ F +Y+ TF+ Y+ MY +
Sbjct: 188 VILLMFAVALMYYVMPDVEQEFRFITPGSVLAVVVWIVASLGFGYYVKTFADYNAMYGSI 247
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+I+ L++ Y+ +LGAE+NA + K
Sbjct: 248 GAIIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|241113097|ref|YP_002972932.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240861305|gb|ACS58971.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 359
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 57/277 (20%), Positives = 117/277 (42%), Gaps = 6/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ + + + +A+ ++ LL++FP + +L G + + +
Sbjct: 60 FSGLRDVFWRVFHEVLADRVTLIAAGVTFYLLLALFPAMAALVSLYGLVADPTTISEHLR 119
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYR 121
+ G P I ++I +++ L A + + +G A+ ++N AY
Sbjct: 120 ELAGLMPSGAFDLIANQIKELVGRRDATLGVTFFVGLGIALWSTHSGTLAIFDAMNVAYE 179
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R LI + L A + V+M + +P+ L+Y+ LL+ W
Sbjct: 180 EEEKRGLIRLNLIGLCFTLCAMLLTVVMVVLVGVMPVILSYLWLDQFKEHMALLMRWPLL 239
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ A+ F PA K+ + G + T I+W ++ F+ Y+ F+ Y+
Sbjct: 240 LLVVAAAVTSVYRFGPSREPA---KLRWMTWGAVLTTIAWAAMSLGFSFYLDHFANYNAT 296
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ L+++++ V I+G ELNA + +
Sbjct: 297 YGTLGALIGFLIWIWLSVVILIVGGELNAELEHQTAK 333
>gi|86359370|ref|YP_471262.1| putative ribonuclease protein [Rhizobium etli CFN 42]
gi|86283472|gb|ABC92535.1| putative ribonuclease protein [Rhizobium etli CFN 42]
Length = 307
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 151/279 (54%), Positives = 209/279 (74%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y RK+ P + L ++++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARKWLPLFADTLDVVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L IGL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTIGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALVFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYM+GV FI+GAE+NA++I + +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFRVFR 279
>gi|254428414|ref|ZP_05042121.1| Ribonuclease BN-like family [Alcanivorax sp. DG881]
gi|196194583|gb|EDX89542.1| Ribonuclease BN-like family [Alcanivorax sp. DG881]
Length = 439
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 97/278 (34%), Gaps = 7/278 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTV 62
F + + F E+ A+ ++ + L ++ P + + + A
Sbjct: 13 RFDSIKAFFALLVRQFNEDGCRQSAAALTYTTLFAIVPVMTVSFAVLSSVPALKDKGTQF 72
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
F + + D + A A L + + S + + +LNR ++V
Sbjct: 73 QTWAFEYFVPSAGNMLLDHLQSF-AKQAANLTGLGIVFLVVTSILMLSTVEQTLNRIWKV 131
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + L+ + + L + L + + + + F L +
Sbjct: 132 QTPRKGLTSLLMYWAVLSLGPICLGLGLAISSYLTS-----QAIFSDTVGYLGGVRLWLS 186
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L L ++ +P K + + G + + + FT +I +Y +Y
Sbjct: 187 LLPFLFTTAMLTLMYTVVPNTKIPLRQGVLGAAVAALLFELAKGGFTFFIKQAPSYEVVY 246
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L+++Y+ + GAEL +++++ ++
Sbjct: 247 GAFAAVPVFLLWIYISWTIVLGGAELVRALVVFQEHRR 284
>gi|77919575|ref|YP_357390.1| hypothetical protein Pcar_1979 [Pelobacter carbinolicus DSM 2380]
gi|77545658|gb|ABA89220.1| tRNA-processing RNAse BN [Pelobacter carbinolicus DSM 2380]
Length = 479
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 112/285 (39%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + + FV + AS ++ + LLS+ P + +L G +
Sbjct: 53 RLFLMRQLQVATIVVRGFVSDGCMLRASALTYATLLSIVPLLALMFSLIKGFGGQNVLEP 112
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ +F + + + + + L T+ + + + S N +
Sbjct: 113 LLFKIFTH---GSGEVVGAILSYIENTNFRRLGTVGLVILVATVLTLLSNIEKSFNHIWG 169
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS F VLL+ + +V + + + + + +
Sbjct: 170 VKETRSLTRRFADYFSVVLLSPLLIVAALSLTTTLRN--QVLVQRLLETAVIGEALLLLF 227
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
LA++ F++LF+P + ++ L G +F W + + ++ + S Y+ +
Sbjct: 228 NVLPYLAVWAAFTFMYLFMPNTRVQLGPALVGGVFGGTLWQLAQWAYVNFQIGVSKYNAI 287
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL-----NASMIIYYWRKKP 281
Y +A++ +V+LY+ + +LG EL NA+++ + ++P
Sbjct: 288 YGTMAALPILIVWLYVSWMIVLLGLELTYAMQNATILREEYSEEP 332
>gi|288559253|sp|A8FPZ2|Y302_SHESH RecName: Full=UPF0761 membrane protein Ssed_0302
Length = 318
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 105/278 (37%), Gaps = 8/278 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TV 62
+ + + + E+ A H++ LLS+ P + ++ + +
Sbjct: 13 FVLSTWHFMIHLKQRLAEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFSGIRGQI 72
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ + + I + ++ +KG + A + + A+ +LN +R
Sbjct: 73 EGFIYNNFLPAAGDTVQVYINEFVSNASKG-TAVGIAALMVVAIMLISAIDKALNNIWRT 131
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS ++ + + + L V + + + +L ++
Sbjct: 132 TEKRSMVVSFSMYWMVLTLGPVLMGASLVATSYVVSLKVFNGS------DLSGVVPVLVE 185
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
M + +++ +P K K L G I + + G F Y+ F TY +Y
Sbjct: 186 RLPMFFSVATFLLIYMVVPNIKVKFFHALLGAIVAALLFEFGKKGFAIYLTKFPTYEAIY 245
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA+I +++Y+ + +LGAE+ A+M Y +++
Sbjct: 246 GALATIPILFMWVYLSWIIVLLGAEITAAMPEYLDKRQ 283
>gi|168181945|ref|ZP_02616609.1| YihY family protein [Clostridium botulinum Bf]
gi|237796863|ref|YP_002864415.1| YihY family protein [Clostridium botulinum Ba4 str. 657]
gi|182674758|gb|EDT86719.1| YihY family protein [Clostridium botulinum Bf]
gi|229263986|gb|ACQ55019.1| YihY family protein [Clostridium botulinum Ba4 str. 657]
Length = 285
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E++ A++S ++ + ++SVFPF++F L G+L H ++ + P
Sbjct: 16 LANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--EDLLLGLKEIMPSNT 73
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +++
Sbjct: 74 YLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQIM 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + LV+ F+ V + I R + L
Sbjct: 134 TIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIRYIIMIGVTIFILA 193
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++ LV+
Sbjct: 194 ALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVIVFLVW 253
Query: 255 LYMLGVFFILGAELNASMIIYYWR 278
LY+ + I G E+NA ++ +
Sbjct: 254 LYLTSIIVITGGEINALLVSNREK 277
>gi|167582142|ref|ZP_02375016.1| YihY family protein [Burkholderia thailandensis TXDOH]
Length = 437
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 93/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLLTAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + GA + +++
Sbjct: 244 AFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|332716378|ref|YP_004443844.1| ribonuclease [Agrobacterium sp. H13-3]
gi|325063063|gb|ADY66753.1| ribonuclease [Agrobacterium sp. H13-3]
Length = 305
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 144/269 (53%), Positives = 195/269 (72%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +DA HF E+DGWAMASH++LS LL++FPF++FG LAGFLGA QF T + ++F
Sbjct: 10 KVAFDAYSHFAEDDGWAMASHMALSILLALFPFLIFGTALAGFLGADQFSETAVHLIFDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WPE IA P+ ++ QVL +P GL TIS LAAAYF+SNGVEALRISLNRAYRV E R WY
Sbjct: 70 WPEAIAGPLAAQVQQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAYRVTETRWWY 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
ITRL+S YVL+A V +S V VA+P+A ++ + FP L + L + + +Y T++ L
Sbjct: 130 ITRLLSLLYVLIAVVVFTGISIVLVAVPVATSFAEQRFPWLTDALNTVSSLGLYGTIVVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+GL+ HL+LPA K +I + PG++ T I WV+GA +F +Y+ TF+ Y+ YAGLAS+M
Sbjct: 190 TVGLVAAHLWLPAGKRRIWDVWPGILLTMIFWVIGAAIFAYYLSTFANYAATYAGLASVM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
LVFLYM+GV F+LGAE+NA+++ Y R
Sbjct: 250 VVLVFLYMVGVIFMLGAEVNAALMKYKVR 278
>gi|148262717|ref|YP_001229423.1| putative ribonuclease BN [Geobacter uraniireducens Rf4]
gi|146396217|gb|ABQ24850.1| tRNA-processing RNAse BN [Geobacter uraniireducens Rf4]
Length = 449
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 104/279 (37%), Gaps = 5/279 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R Y I+ ++F++++ AS +S + +LS+ P L LG +
Sbjct: 31 RHYGVKYLQIMALVAKNFLDDNCMLRASALSFTTILSIVPLFALTFALLKGLGVQNKLEP 90
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + + + + I + + + + N +
Sbjct: 91 L---ILEQVTAGSHELVDKIVTYINNTNMTSMGAIGLVTLIVTVITLLGNIEKAFNVVWG 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS Y ++ + ++ + ++ + K+ + ++
Sbjct: 148 VRETRSPYRKFSDYLSVLVSGPLLMLAAISITTSLQ--SQAMVKWLVETAYIGDLMLLFF 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++++ + F+++F+P K + S + G + W + + H+ V + Y+ +
Sbjct: 206 RLIPYFSIWLAMFFLYIFIPNTKVRFKSAIIGGVLAGTIWQIAQWGYIHFQVGVAKYNAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA + +V++Y + + G E+ ++ ++
Sbjct: 266 YGTLALLPIFMVWIYTSWLIVLFGVEVVSAHQNIRTFRR 304
>gi|83721597|ref|YP_443133.1| YihY family protein [Burkholderia thailandensis E264]
gi|257139363|ref|ZP_05587625.1| YihY family protein [Burkholderia thailandensis E264]
gi|83655422|gb|ABC39485.1| YihY family protein [Burkholderia thailandensis E264]
Length = 437
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 93/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLLTAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + GA + +++
Sbjct: 244 AFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|330504179|ref|YP_004381048.1| tRNA-processing RNAse BN [Pseudomonas mendocina NK-01]
gi|328918465|gb|AEB59296.1| tRNA-processing RNAse BN [Pseudomonas mendocina NK-01]
Length = 405
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 108/283 (38%), Gaps = 9/283 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
M+ + FVE G A+ ++ + L +V P + + + A Q V
Sbjct: 1 MQVRLKDWLGFWLSLYQRFVENRGAGNAAALTYTTLFAVVPMMTVTFAMLSAIPAFQGVG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + + + + L A + + + + N
Sbjct: 61 EEIQGFIFHNFVPSTGETVQEYLREFTTQARQ-LTWFGVGLLAVTAFLMLVTIEKTFNVI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + L+ + + L + L V I + + ++
Sbjct: 120 WRVRQPRRGMSSFLLYWAILSLGPLLLGAGFAVSTYIASLS------LISGPDAVVGAKT 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+A +L+ ++ +P + + L G +F+ I + + LF Y+ F Y
Sbjct: 174 LLSFAPLLSSIAAFTLLYAAVPNTRVPLRHALLGGLFSAILFEIAKALFGLYVRLFPGYH 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII-YYWRKKP 281
+Y A++ LV++Y+ + +LGAEL + YWR++P
Sbjct: 234 LIYGAFATVPLFLVWIYLSWLIVLLGAELVYGLSQPRYWRREP 276
>gi|158520031|ref|YP_001527901.1| putative ribonuclease BN [Desulfococcus oleovorans Hxd3]
gi|158508857|gb|ABW65824.1| putative ribonuclease BN [Desulfococcus oleovorans Hxd3]
Length = 450
Score = 150 bits (378), Expect = 3e-34, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 96/269 (35%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
I A F+ + G AS ++ +LS+ P + +A G Q +
Sbjct: 37 RVLVRYARIFMIAGREFITDGGPLRASALTFYTVLSLVPVMALAFAVAKGFGLQQTLEKE 96
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ F VI + I + L + + + + S N +
Sbjct: 97 VLAQFPGQEAVILQMIEYARALLDQTKGGLLAGVGVAVLIWTVIKVLNNIEKSFNAIWAN 156
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS +L+ + L++ V + + + LG II G
Sbjct: 157 TTPRSMGKKFSDYLSIMLVGPLLLILSGSATVLVATQVTAITNKIFFLGWFAPIIMTGLQ 216
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L +++ F++ F+P + + S + G + ++ + + + V S Y+ +Y
Sbjct: 217 LLPYLFVWLLFSFIYGFMPNTRVPVRSCIFGGVLAGTAFKLLQWAYLIFQVGVSRYNAIY 276
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
A++ L+++ + + + GAEL +
Sbjct: 277 GSFAALPLFLIWMQLSWLVTLFGAELAYA 305
>gi|153808297|ref|ZP_01960965.1| hypothetical protein BACCAC_02585 [Bacteroides caccae ATCC 43185]
gi|149129200|gb|EDM20416.1| hypothetical protein BACCAC_02585 [Bacteroides caccae ATCC 43185]
Length = 439
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 97/275 (35%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFDNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E ++ + + + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNIETTEAILSFVNSYLSQTKGGVFIGVGLVMLLWTVINLVSNIEITFNRIWE 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L L ++
Sbjct: 148 VKKARSMYRKITDYFSMFLLMPILIVVSGGLSLFMSTILK----QMDDFVLLAPVMKFMI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + + S Y+ +
Sbjct: 204 RLIPFVLTWMMFTGLYIFMPNTKVKFKHALIAGILAGSAYQAFQFLYINSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPLFLLWLQISWTICLFGAELAYAGQNIR 298
>gi|159185810|ref|NP_357022.2| transporter [Agrobacterium tumefaciens str. C58]
gi|159140944|gb|AAK89807.2| transporter [Agrobacterium tumefaciens str. C58]
Length = 305
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 144/269 (53%), Positives = 194/269 (72%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +DA HF E+DGWAMASH++LS LL++FPF++FG LAGFLGA QF T + ++F
Sbjct: 10 KVAFDAYSHFAEDDGWAMASHMALSILLALFPFLIFGTALAGFLGADQFSETAVHLIFDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WPE IA P+ ++ QVL +P GL TIS LAAAYF+SNGVEALRISLNRAYRV E R WY
Sbjct: 70 WPEAIAGPLAAQVQQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAYRVTETRWWY 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+TRL+S YVL+A V +S V VA+P+A ++ FP L +LL + + +Y T++ L
Sbjct: 130 VTRLLSLLYVLIAVVVFTGISIVLVAVPVATSFAEARFPWLTDLLNTVSSLGLYGTIVVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
GL+ HL+LPA K +I + PG++ T I WV+GA +F +Y+ TF+ Y+ YAGLAS+M
Sbjct: 190 TAGLVAAHLWLPAGKRRIWDVWPGILLTMIFWVIGAAIFAYYLSTFANYAATYAGLASVM 249
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
LVFLYM+GV F+LGAE+NA+++ Y R
Sbjct: 250 VVLVFLYMVGVIFMLGAEVNAALMKYKVR 278
>gi|298695221|gb|ADI98443.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
Length = 405
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|282917228|ref|ZP_06324983.1| hypothetical protein SATG_01802 [Staphylococcus aureus subsp.
aureus D139]
gi|282318855|gb|EFB49210.1| hypothetical protein SATG_01802 [Staphylococcus aureus subsp.
aureus D139]
Length = 405
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|170760762|ref|YP_001788733.1| YihY family protein [Clostridium botulinum A3 str. Loch Maree]
gi|169407751|gb|ACA56162.1| YihY family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 285
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E++ A++S ++ + ++SVFPF++F L G+L H ++ + P
Sbjct: 16 LANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--EDLLLGLKEIMPSNT 73
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +++
Sbjct: 74 YLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQIM 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + LV+ F+ V + I R + L
Sbjct: 134 TIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIRYIIMIGVTIFILA 193
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ + + +LPG IF+ I+W++ ++ F+ Y+ F+ YS +Y + +++ LV+
Sbjct: 194 ALYYYTPSKRLRWRDVLPGAIFSTIAWIIASMGFSFYVDNFNNYSRLYGSIGAVIVFLVW 253
Query: 255 LYMLGVFFILGAELNASMIIYYWR 278
LY+ + I G E+NA ++ +
Sbjct: 254 LYLTSIIVITGGEINALLVSSREK 277
>gi|282911508|ref|ZP_06319308.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WBG10049]
gi|282324517|gb|EFB54829.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WBG10049]
gi|312437652|gb|ADQ76723.1| YihY family protein [Staphylococcus aureus subsp. aureus TCH60]
Length = 405
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|255693902|ref|ZP_05417577.1| YihY family protein [Bacteroides finegoldii DSM 17565]
gi|260620267|gb|EEX43138.1| YihY family protein [Bacteroides finegoldii DSM 17565]
Length = 439
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 48/270 (17%), Positives = 97/270 (35%), Gaps = 4/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I F ++ AS ++ S LL++ P + +A G + +
Sbjct: 28 KFSLYNIIKTIYLCINRFTKDRMANKASALTYSTLLAIVPILAILFAVARGFGFNNLMEH 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E ++ + I + + N V + I+ NR +
Sbjct: 88 QFRNGFGGNTETTEAILSFVDSYLSQTKGGVFIGIGLVMLLWTVINLVSNIEITFNRIWE 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L L I+
Sbjct: 148 VKKARSMYRKITDYFSMFLLMPILIVVSGGLSIFMSTMLK----QMDDFVLLAPIMKFMI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L + ++ L+ + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALIAGVLAGTAYQAFQYLYISSQLGVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPLFLLWLQISWTICLFGAELAYA 293
>gi|85859314|ref|YP_461516.1| ribonuclease BN family membrane protein [Syntrophus aciditrophicus
SB]
gi|85722405|gb|ABC77348.1| membrane spanning protein ribonuclease BN-like family [Syntrophus
aciditrophicus SB]
Length = 454
Score = 149 bits (377), Expect = 3e-34, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 104/272 (38%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ +F + ++ +I F E+ AS ++ +L+S+ P +A G + +
Sbjct: 40 KSFFLTLLRVLILSIRGFDEDKCKLRASSLTFYSLVSIVPVAAMAFGIAKGFGFEKVLEA 99
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ E++A I + + I + + + + + N +
Sbjct: 100 QLRSKLAGHEEILANVIQFSHSLLENTRGGVIAGIGLIVLFWAVIKVLGQIEEAFNDIWG 159
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E R+ +L+ V +++ S + V I L + + F LG L + +
Sbjct: 160 VKERRTIGRMFSDYLSLMLICPVLIILSSSMTVFITTQLNLIMEKFTILGVLSPLFFLFL 219
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L+ F+++F+P K + S L I + + + + + Y+ +
Sbjct: 220 KLLPYGLLWSLFTFIYIFMPNTKVRFTSGLLAGIIAGTIFQIVQWGYITFQIGVVQYNAI 279
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y A + LV+L + + + GAEL+ +
Sbjct: 280 YGSFAVLPLFLVWLQLSWLIVLYGAELSFAYQ 311
>gi|121997501|ref|YP_001002288.1| putative ribonuclease BN [Halorhodospira halophila SL1]
gi|288559243|sp|A1WUX4|Y704_HALHL RecName: Full=UPF0761 membrane protein Hhal_0704
gi|121588906|gb|ABM61486.1| tRNA-processing RNAse BN [Halorhodospira halophila SL1]
Length = 451
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 92/266 (34%), Gaps = 8/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPE 72
I+ ++ A ++ LL++ P + G ++ + + + +
Sbjct: 44 YLIQRIQQDQCAKSAGMLAYVTLLAIVPLMTIGFSVLAAFPVFEGVTDRLREAMVDYLVP 103
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ I + + + A L + + + + LN +RV R
Sbjct: 104 AASDAIDEHLENFMG-RAAELTAVGIAGLTVTALLLLNTIERVLNEIWRVERPRPTLQRF 162
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
++ + + + + L + + L +I A + I
Sbjct: 163 MVYWTVLTMGPLLLGVSVASTSYMGTV------NLGPLEPPSDLIAQLLNLAPFVVQAIV 216
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ +P ++ + G + + + F +I TY +Y LA++ L
Sbjct: 217 FSLIYSLVPHRSVPVLHAVIGGVVASGLFELAKGGFAAFIARAPTYEVVYGALAALPIFL 276
Query: 253 VFLYMLGVFFILGAELNASMIIYYWR 278
V+LY+ + ++GAE+ ++ Y WR
Sbjct: 277 VWLYISWLVILIGAEVTQALRGYRWR 302
>gi|257426015|ref|ZP_05602437.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428688|ref|ZP_05605083.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431298|ref|ZP_05607674.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 68-397]
gi|257434016|ref|ZP_05610367.1| ribonuclease BN [Staphylococcus aureus subsp. aureus E1410]
gi|257436920|ref|ZP_05612962.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282904514|ref|ZP_06312399.1| YihY family protein [Staphylococcus aureus subsp. aureus C160]
gi|282906286|ref|ZP_06314138.1| ribonuclease BN [Staphylococcus aureus subsp. aureus Btn1260]
gi|282909202|ref|ZP_06317018.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282914680|ref|ZP_06322465.1| YihY family protein [Staphylococcus aureus subsp. aureus M899]
gi|282919717|ref|ZP_06327449.1| hypothetical protein SASG_02334 [Staphylococcus aureus subsp.
aureus C427]
gi|282925121|ref|ZP_06332781.1| hypothetical protein SARG_02410 [Staphylococcus aureus subsp.
aureus C101]
gi|283958644|ref|ZP_06376090.1| YihY family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293507757|ref|ZP_06667599.1| hypothetical protein SCAG_02273 [Staphylococcus aureus subsp.
aureus 58-424]
gi|293510775|ref|ZP_06669477.1| ribonuclease BN [Staphylococcus aureus subsp. aureus M809]
gi|293539314|ref|ZP_06671993.1| YihY family protein [Staphylococcus aureus subsp. aureus M1015]
gi|297590065|ref|ZP_06948705.1| YihY family protein [Staphylococcus aureus subsp. aureus MN8]
gi|257271158|gb|EEV03315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274332|gb|EEV05844.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 65-1322]
gi|257277947|gb|EEV08603.1| ribonuclease BN [Staphylococcus aureus subsp. aureus 68-397]
gi|257280942|gb|EEV11086.1| ribonuclease BN [Staphylococcus aureus subsp. aureus E1410]
gi|257283709|gb|EEV13834.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
M876]
gi|282313079|gb|EFB43477.1| hypothetical protein SARG_02410 [Staphylococcus aureus subsp.
aureus C101]
gi|282316355|gb|EFB46732.1| hypothetical protein SASG_02334 [Staphylococcus aureus subsp.
aureus C427]
gi|282321394|gb|EFB51720.1| YihY family protein [Staphylococcus aureus subsp. aureus M899]
gi|282326770|gb|EFB57067.1| ribonuclease BN [Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330483|gb|EFB60000.1| ribonuclease BN [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595070|gb|EFC00037.1| YihY family protein [Staphylococcus aureus subsp. aureus C160]
gi|283471153|emb|CAQ50364.1| transporter [Staphylococcus aureus subsp. aureus ST398]
gi|283789684|gb|EFC28506.1| YihY family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290919849|gb|EFD96918.1| YihY family protein [Staphylococcus aureus subsp. aureus M1015]
gi|291094820|gb|EFE25088.1| hypothetical protein SCAG_02273 [Staphylococcus aureus subsp.
aureus 58-424]
gi|291466406|gb|EFF08930.1| ribonuclease BN [Staphylococcus aureus subsp. aureus M809]
gi|297577193|gb|EFH95907.1| YihY family protein [Staphylococcus aureus subsp. aureus MN8]
gi|323439155|gb|EGA96883.1| ribonuclease BN, putative [Staphylococcus aureus O11]
gi|323441561|gb|EGA99211.1| ribonuclease BN, putative [Staphylococcus aureus O46]
Length = 405
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|153939153|ref|YP_001392760.1| YihY family protein [Clostridium botulinum F str. Langeland]
gi|152935049|gb|ABS40547.1| YihY family protein [Clostridium botulinum F str. Langeland]
gi|295320739|gb|ADG01117.1| YihY family protein [Clostridium botulinum F str. 230613]
Length = 285
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E++ A++S ++ + ++SVFPF++F L G+L H ++ + P
Sbjct: 16 LANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--EDLLLGLKEIMPSNT 73
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +++
Sbjct: 74 YLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFVKVQIM 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + LV+ F+ V + I R + L
Sbjct: 134 TIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIRYIIMIGVTIFILA 193
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ + + +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++ LV+
Sbjct: 194 ALYYYTPSKRLRWRDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVIVFLVW 253
Query: 255 LYMLGVFFILGAELNASMIIYYWR 278
LY+ + I G E+NA ++ +
Sbjct: 254 LYLTSIIVITGGEINALLVSSREK 277
>gi|89054551|ref|YP_510002.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88864100|gb|ABD54977.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 318
Score = 149 bits (377), Expect = 4e-34, Method: Composition-based stats.
Identities = 58/273 (21%), Positives = 118/273 (43%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + + +A+ ++ LL++FP I ++G L + + + G
Sbjct: 20 DVAFRLKDEVANDRVGLIAAGVAFYGLLALFPAITAVMAISGLLIEPNAIVDQLSRLGGL 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ + +TD+ V GL L A Y +S G+ +L +N AY E R
Sbjct: 80 LPQEVIAIVTDQATAVAGSREGGLGLAAIFGVLVAFYSASKGMASLMQGVNVAYDEDEER 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L++FG LL V L++ +A+P LA++ + ++ +
Sbjct: 140 GFIRLKLVTFGLTLLLIVGLLVSLGAMLALPAVLAFID----LGPMVEALLTAALWVGLI 195
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
GL ++ + P+ ++ + G + + W+V + F Y+ F +Y+ + L
Sbjct: 196 ALTIFGLSVLYRYAPSRENAEWKWVSLGAVVGCVVWIVASAGFAFYVANFGSYNESFGTL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ L++ ++ +LGAELNA + R
Sbjct: 256 GGVVVLLMWFWISAFIILLGAELNAELEAQTRR 288
>gi|253734428|ref|ZP_04868593.1| ribonuclease BN [Staphylococcus aureus subsp. aureus TCH130]
gi|253727581|gb|EES96310.1| ribonuclease BN [Staphylococcus aureus subsp. aureus TCH130]
gi|329731512|gb|EGG67875.1| YihY family protein [Staphylococcus aureus subsp. aureus 21193]
Length = 405
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|311105400|ref|YP_003978253.1| ribonuclease BN-like family protein 1 [Achromobacter xylosoxidans
A8]
gi|310760089|gb|ADP15538.1| ribonuclease BN-like family protein 1 [Achromobacter xylosoxidans
A8]
Length = 437
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 101/272 (37%), Gaps = 9/272 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF-- 67
++ + E EE +AS ++ + +L++ P + +L Q ++
Sbjct: 30 RVVRFSAERAGEEKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALEDFLTN 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ I D + Q A A L I + S + + + N + V R
Sbjct: 90 SLMPPSVSDNIMDYLNQF-ARQASRLTAIGGVFLLITSLLLIMTIDKAFNDIWHVTRQRP 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + + L V + + R+ + ++ + + ++
Sbjct: 149 LRQRALVYWAIITLGPVVAGASLWATSFV------ARESLGLVRDVPEALSVAVSFIPLI 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+G + + +P + L G T + + F +Y+ F TY+ +Y A+
Sbjct: 203 LTALGFATLFVMVPNREVLWRDALVGGCVTAVVLEIMKSAFAYYLTRFPTYTVIYGAFAT 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L+++Y+ + +LGA L +S + +
Sbjct: 263 LPIFLLWIYLSWLAVLLGAILASSAPLIRLGR 294
>gi|217979693|ref|YP_002363840.1| ribonuclease BN [Methylocella silvestris BL2]
gi|217505069|gb|ACK52478.1| ribonuclease BN [Methylocella silvestris BL2]
Length = 360
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 109/274 (39%), Gaps = 9/274 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F + +A+ ++ LL++FP + +L GF V ID++ G
Sbjct: 87 VLQRTWRGFNTDRILLVAAGVTFYLLLAIFPAVSALVSLYGFFADRSGVGAQIDLLVGLL 146
Query: 71 PEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + DE ++ L + + ++ G++ L ++N Y E RS
Sbjct: 147 PAGGLDLLRDEATRIATSGQSTLSAVFLFGLAVSIWSANAGMKGLFEAMNVVYEEQENRS 206
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ S + A + + V +P+ L YV + I+ R
Sbjct: 207 FIRLNAWSLAFTFGALLFALAALGAIVLVPIILDYV----GLERSGAAILSLARWPLLFF 262
Query: 188 ALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + L ++ + P+ I G W+V ++LF+ Y+ F +Y+ Y L
Sbjct: 263 SLVLALAILYRYGPSRNPAPSWRWITWGSAAASALWLVASILFSWYVANFGSYNATYGSL 322
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + ++++ ++G ELN+ + RK
Sbjct: 323 GAAIGFMTWIWISITVVLVGGELNSQIERQAGRK 356
>gi|82751536|ref|YP_417277.1| hypothetical protein SAB1815 [Staphylococcus aureus RF122]
gi|82657067|emb|CAI81504.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 405
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|160891871|ref|ZP_02072874.1| hypothetical protein BACUNI_04329 [Bacteroides uniformis ATCC 8492]
gi|156858349|gb|EDO51780.1| hypothetical protein BACUNI_04329 [Bacteroides uniformis ATCC 8492]
Length = 446
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 98/270 (36%), Gaps = 4/270 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + + I F
Sbjct: 41 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMESQIVNGF 100
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G E + + + + + + N + + I+ NR ++V + RS
Sbjct: 101 GGPTETTEVILQFVNSYLSQTKSGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVKKARS 160
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
Y F +LL + LV+ + + + + + L + +
Sbjct: 161 MYRKITDYFSMLLLMPILLVVSGGLSIFMSTMVKNLED----FTLLAPVGKFMVRLIPFV 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +++F+P K K+ L I + L+ + S Y+ +Y A+
Sbjct: 217 LTWFMFTALYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGSFAA 276
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L + + GAEL +
Sbjct: 277 LPMFLLWLQVSWTICLFGAELTYAGQNIRN 306
>gi|116254049|ref|YP_769887.1| transmembrane ribonuclease protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115258697|emb|CAK09802.1| putative transmembrane ribonuclease protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 307
Score = 149 bits (376), Expect = 4e-34, Method: Composition-based stats.
Identities = 152/279 (54%), Positives = 211/279 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y RK+FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFTAISILLVALPLALDYSRKWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYM+GV FI+GAE+NA++I + +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFRVFR 279
>gi|218663736|ref|ZP_03519666.1| putative ribonuclease protein [Rhizobium etli IE4771]
Length = 307
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 150/279 (53%), Positives = 209/279 (74%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLGIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYM+G FI+GAE+NA++I + +
Sbjct: 241 TYAGLASVMIVLIFLYMVGAIFIIGAEINAALIKFRVFR 279
>gi|283771032|ref|ZP_06343923.1| ribonuclease BN [Staphylococcus aureus subsp. aureus H19]
gi|283459626|gb|EFC06717.1| ribonuclease BN [Staphylococcus aureus subsp. aureus H19]
Length = 405
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|258422960|ref|ZP_05685859.1| ribonuclease BN [Staphylococcus aureus A9635]
gi|257846747|gb|EEV70762.1| ribonuclease BN [Staphylococcus aureus A9635]
Length = 405
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|241206535|ref|YP_002977631.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
gi|240860425|gb|ACS58092.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 307
Score = 149 bits (376), Expect = 5e-34, Method: Composition-based stats.
Identities = 152/279 (54%), Positives = 211/279 (75%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R+WY TRL S GYVL+A + +S + VA+PLAL Y RK+FP + L I+++
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFTAISILLVALPLALDYSRKWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYM+GV FI+GAE+NA++I + +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFRVFR 279
>gi|189467044|ref|ZP_03015829.1| hypothetical protein BACINT_03427 [Bacteroides intestinalis DSM
17393]
gi|189435308|gb|EDV04293.1| hypothetical protein BACINT_03427 [Bacteroides intestinalis DSM
17393]
Length = 438
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 101/273 (36%), Gaps = 4/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + +
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMESQVR 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ FG + + + + + + + N + ++ I+ NR + + +
Sbjct: 91 MGFGGHNQTTEVILQFVNSYLSQTKSGIFIGVGLIMLLWTVINLISSIEITFNRIWEIKK 150
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS Y F LL + +VI + + + +L Y+ F L I+
Sbjct: 151 ARSMYRKITDYFSMFLLMPILIVISGGLSIFMSTSLKYIEDFVL----LAPILKFLIRLI 206
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + +++++P K + L I + L+ + S Y+ +Y
Sbjct: 207 PFVLTWFMFTGLYIYMPNTKVRFKPALISGILAGTAHQAFQFLYISGQLWVSRYNAIYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L++L + + GAEL +
Sbjct: 267 FAALPLFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|224535450|ref|ZP_03675989.1| hypothetical protein BACCELL_00313 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522916|gb|EEF92021.1| hypothetical protein BACCELL_00313 [Bacteroides cellulosilyticus
DSM 14838]
Length = 438
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 98/273 (35%), Gaps = 4/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + +
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNNASALTYSTLLAIVPILAILFAIARGFGFSNLMENQVR 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ FG + + + + + + + N + + I+ NR +++ +
Sbjct: 91 MGFGGHNQTTEVILQFVDSYLSETKSGIFIGVGLIMLLWTVINLITNIEITFNRIWQIKK 150
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS Y F LL + +VI + + + L Y+ F L I+
Sbjct: 151 ARSMYRKITDYFSMFLLMPILIVISGGLSIFMSTTLKYIEDFVL----LAPILKFLIRLI 206
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +++++P K K L + + L+ + S Y+ +Y
Sbjct: 207 PFALTWFMFTGLYIYMPNTKVKFKHALIAGVLAGTAHQAFQFLYISGQLWVSRYNAIYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L++L + + GAEL +
Sbjct: 267 FAALPLFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|227823215|ref|YP_002827187.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
gi|227342216|gb|ACP26434.1| putative ribonuclease protein [Sinorhizobium fredii NGR234]
Length = 295
Score = 149 bits (375), Expect = 5e-34, Method: Composition-based stats.
Identities = 137/279 (49%), Positives = 195/279 (69%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG L FLGA QF
Sbjct: 1 MPASLRIIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALGSFLGADQFAV 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F AWPE IAKP+ DEI++VL + G+ T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHLIFDAWPESIAKPVADEIVEVLTIQRGGVLTLSVVAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WYITRL S G+VL + L ++S + VA+PLA+ ++ P L +L + N
Sbjct: 121 RVAESRPWYITRLASLGFVLAGVLILAVISILLVAVPLAVRNADQWLPWLDAVLATVDNW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ L GL+ HL+LP KI+ +LPGV+ T + W +GA F Y+ TFS Y
Sbjct: 181 GLALALVMLTGGLLVSHLWLPDGHRKIVDVLPGVLLTLLLWSIGAYAFASYLATFSNYVA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLASI+ LVFLYM+G FI+GAE+NA+++ + ++
Sbjct: 241 TYAGLASIVVVLVFLYMVGAIFIIGAEINAAILKFKVKR 279
>gi|258447867|ref|ZP_05696001.1| ribonuclease BN [Staphylococcus aureus A6224]
gi|257858799|gb|EEV81668.1| ribonuclease BN [Staphylococcus aureus A6224]
Length = 405
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 118/270 (43%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIFHQRSVIK 338
>gi|33596535|ref|NP_884178.1| hypothetical protein BPP1917 [Bordetella parapertussis 12822]
gi|33566304|emb|CAE37217.1| putative membrane protein [Bordetella parapertussis]
Length = 437
Score = 149 bits (375), Expect = 6e-34, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 102/278 (36%), Gaps = 9/278 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F + ++ A + E+ +AS ++ + +L++ P + +L Q +
Sbjct: 23 WFTRMGRVVRFAGQRADEQKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVAL 82
Query: 64 DVVF--GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ P ++ I D + Q A A L I S + + + N ++
Sbjct: 83 EDFLANSLMPPSVSDNIMDYLNQF-ARQATRLTAIGGAFLIVTSLLLIMTIDKTFNDIWQ 141
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R L+ + + L V + + R+ + ++ +
Sbjct: 142 VTRQRPLPQRALVYWAVITLGPVVAGASLWATSFV------ARESLGLVRDVPEAVSVAI 195
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +G + + +P + L G T I + F +Y+ F Y+ +
Sbjct: 196 SFIPLVLTGLGFAALFVVVPNRRVYWKDALVGGFGTAIVLELMKAGFAYYLTRFPAYTVI 255
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y A++ L+++Y+ + + GA + AS + +
Sbjct: 256 YGAFATLPIFLLWIYLSWLAVLFGATVAASAPLIRLGR 293
>gi|209551132|ref|YP_002283049.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209536888|gb|ACI56823.1| ribonuclease BN [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 307
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 151/279 (54%), Positives = 209/279 (74%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MPKALRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL +P GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIPRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++
Sbjct: 121 RVQETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIY T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+
Sbjct: 181 RIYGTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M L+FLYM+GV FI+GAE+NA++I + +
Sbjct: 241 TYAGLASVMIVLIFLYMVGVIFIIGAEINAALIKFRVFR 279
>gi|330877283|gb|EGH11432.1| ribonuclease BN [Pseudomonas syringae pv. glycinea str. race 4]
Length = 313
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|126729991|ref|ZP_01745803.1| ribonuclease BN, putative [Sagittula stellata E-37]
gi|126709371|gb|EBA08425.1| ribonuclease BN, putative [Sagittula stellata E-37]
Length = 322
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 117/278 (42%), Gaps = 8/278 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + D+ +++ +A+ I+ ALLS+FP I LAG F+ D
Sbjct: 15 FKGLLDVGVRVWRVQNDDNLGLLAAGIAFYALLSLFPGITAAVALAGLFTDPSFMVETSD 74
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYR 121
+ P + + ++ +V+ + L L A + +S + I LN Y
Sbjct: 75 ALADVVPTAAEEIMLGQLREVVTTSSSSLGWAVLLSIGLALFSASRATQNFIIGLNVIYG 134
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R + RL++ L + LVI + A+P A +++ + ++ R
Sbjct: 135 EKERRGFIKLRLLNIALTLGLIIGLVIAIAIVAAMPAAASFISNR----TWVTDLVLYLR 190
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ G+ FV P+ + ++ + PG + WV+G++ F+ Y+ +F TY+
Sbjct: 191 WPVLFIVGAFGIAFVFRVGPSRRYARWRWLTPGALLACALWVIGSIGFSRYVASFGTYNE 250
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L ++ L +L++ +LGA ++A +
Sbjct: 251 TFGALGGVIVLLTWLWLTAYIVLLGAAVDAELEAQTRH 288
>gi|49484124|ref|YP_041348.1| hypothetical protein SAR1973 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295428464|ref|ZP_06821091.1| hypothetical protein SIAG_02233 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|49242253|emb|CAG40960.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295127446|gb|EFG57085.1| hypothetical protein SIAG_02233 [Staphylococcus aureus subsp.
aureus EMRSA16]
Length = 405
Score = 148 bits (374), Expect = 7e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYYVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|320327458|gb|EFW83471.1| ribonuclease BN, putative [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 316
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + F++++ AS ++ L S+FPF++F L GFL F +
Sbjct: 13 KVLVRTVNEFLDDEMSTYASALAYQMLFSLFPFLLFLIALIGFLHLPDFFSWLRLQSEFL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R +
Sbjct: 73 LPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPIW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + + L+ + V P + ++ ++ + R A ++ L
Sbjct: 132 KRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIILL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I+
Sbjct: 192 MVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ Y+ +LGAE+NA + K
Sbjct: 252 VLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 282
>gi|149926263|ref|ZP_01914525.1| putative ribonuclease bn transmembrane protein [Limnobacter sp.
MED105]
gi|149825081|gb|EDM84293.1| putative ribonuclease bn transmembrane protein [Limnobacter sp.
MED105]
Length = 455
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 103/274 (37%), Gaps = 9/274 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI- 63
+ E+ +A+ ++ + +LS+ P + + + +
Sbjct: 52 LRWWIAFTRLVSQRISEQRLPQVAASLTFTTVLSLVPLATVVLAIFTAFPMFDRLQSSLQ 111
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ +PE +++ I + Q + AKGL I + + + + N+ + V
Sbjct: 112 GYLIDSFFPETLSETILTYVTQF-SDKAKGLTAIGIVFLVITALTTMFTVDRVFNQIWNV 170
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS ++ + + LA V + + V A + + + +L ++
Sbjct: 171 KRQRSTMNKVVLYWAVLSLAPVLIGLSISVST------ALIGETMAGVNPVLGGMFPALN 224
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + F++ +P L G + + + + F YI F +Y+ +Y
Sbjct: 225 LIPLTLTVLAFAFIYRIVPNRAVHWKDALVGGVLAAVLFEISKRAFAAYITHFPSYTALY 284
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA+ L+++Y+ + +LGA A++ +
Sbjct: 285 GALAAFPIFLLWIYVSWIIVLLGASTVAALPVAR 318
>gi|90426068|ref|YP_534438.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB18]
gi|90108082|gb|ABD90119.1| ribonuclease BN, putative [Rhodopseudomonas palustris BisB18]
Length = 351
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 119/277 (42%), Gaps = 8/277 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ I+ ++ A+A+ LL++FP I + +
Sbjct: 53 RSWAAWKTILVTLYHRTNDDRLLAVAAGTVFYGLLALFPAITALVSSYALFSDGNTINQH 112
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRA 119
+ ++ G P I D++ +VLA L T S A + ++ G++A+ SLN
Sbjct: 113 LSLLAGLVPAGAFSIIQDQVGRVLAKGDVKLGTAFLFSMALALWSANGGMKAIIDSLNVV 172
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y E R ++ +S + L + ++ + VA P+ L+ V +I
Sbjct: 173 YGEQEKRGFFKLNAVSLAFTLGSLAAVLAAIGLVVAAPIVLSMV----GLGATADALIRY 228
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
GR A + + GL ++ + P+ + I PG + +SW+ G+ ++Y+ F+ Y
Sbjct: 229 GRWPALAVLVLFGLAVLYRYGPSLTAPQWRWISPGSVAAALSWLAGSAALSYYLANFANY 288
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L + + +V+++M + +LGA+LN+++
Sbjct: 289 DATYGSLGAAIGLMVWMWMTTIVVLLGAQLNSAIDQQ 325
>gi|167570181|ref|ZP_02363055.1| YihY family protein [Burkholderia oklahomensis C6786]
Length = 437
Score = 148 bits (374), Expect = 8e-34, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 93/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFAAKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLLTAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAAVGGVCAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + GA + +++
Sbjct: 244 AFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|302333548|gb|ADL23741.1| putative membrane protein [Staphylococcus aureus subsp. aureus
JKD6159]
Length = 405
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|23097645|ref|NP_691111.1| hypothetical protein OB0190 [Oceanobacillus iheyensis HTE831]
gi|22775868|dbj|BAC12146.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 282
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 2/256 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
I F +D +A+ ++ LLSVFP +V + + I + PE +
Sbjct: 10 FITKFKNDDVPLLAASLAYYFLLSVFPLLVVAFAIIPYFNISP--QDAIQFISSILPEQL 67
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + I+ ++ P GL TI L + +SNG+ A N +Y V E RS+ TR I
Sbjct: 68 ASTFQENIVSIVETPRGGLLTIGILGTLWSASNGINAFIKVSNESYEVEETRSFIKTRAI 127
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+FG + ++ + V + L + I+ R ++ + + L+
Sbjct: 128 AFGLTIAMIFAVITAIILPVFGDVILTMAMSIVGINESTEWILQISRFAISIAVITLLLL 187
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F P AK + I+PG + I W++ + F+ Y+ F YS MY L ++ +++
Sbjct: 188 TLYRFAPNAKLPVKHIIPGTLTASILWLIISFGFSIYVSNFGNYSNMYGSLGGVIILMIW 247
Query: 255 LYMLGVFFILGAELNA 270
++ G+ ++G +N
Sbjct: 248 FFLTGMILLIGGIINV 263
>gi|33592226|ref|NP_879870.1| hypothetical protein BP1088 [Bordetella pertussis Tohama I]
gi|33601088|ref|NP_888648.1| hypothetical protein BB2105 [Bordetella bronchiseptica RB50]
gi|33571871|emb|CAE41386.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|33575523|emb|CAE32601.1| putative membrane protein [Bordetella bronchiseptica RB50]
gi|332381643|gb|AEE66490.1| hypothetical protein BPTD_1080 [Bordetella pertussis CS]
Length = 437
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 102/278 (36%), Gaps = 9/278 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F + ++ A + E+ +AS ++ + +L++ P + +L Q +
Sbjct: 23 WFTRMGRVVRFAGQRADEQKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVAL 82
Query: 64 DVVF--GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ P ++ I D + Q A A L I S + + + N ++
Sbjct: 83 EDFLANSLMPPSVSDNIMDYLNQF-ARQATRLTAIGGAFLIVTSLLLIMTIDKTFNDIWQ 141
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R L+ + + L V + + R+ + ++ +
Sbjct: 142 VTRQRPLPQRALVYWAVITLGPVVAGASLWATSFV------ARESLGLVRDVPEAVSVAI 195
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +G + + +P + L G T I + F +Y+ F Y+ +
Sbjct: 196 SFIPLVLTGLGFAALFVVVPNRRVYWKDALVGGFGTAIVLELMKAGFAYYLTRFPAYTVI 255
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y A++ L+++Y+ + + GA + AS + +
Sbjct: 256 YGAFATLPIFLLWIYLSWLAVLFGATVAASAPLIRLGR 293
>gi|146308010|ref|YP_001188475.1| tRNA-processing RNAse BN [Pseudomonas mendocina ymp]
gi|166918691|sp|A4XWM7|Y2988_PSEMY RecName: Full=UPF0761 membrane protein Pmen_2988
gi|145576211|gb|ABP85743.1| tRNA-processing RNAse BN [Pseudomonas mendocina ymp]
Length = 405
Score = 148 bits (373), Expect = 9e-34, Method: Composition-based stats.
Identities = 48/283 (16%), Positives = 106/283 (37%), Gaps = 9/283 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
M + F+E G A+ ++ + L +V P + + + A Q V
Sbjct: 1 MHRRLKDWLGFWLSLYQRFIENRGAGNAAALTYTTLFAVVPMMTVTFAMLSAIPAFQGVG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + + + A + L A + + + + N
Sbjct: 61 EEIQGFIFNNFVPSTGETVQEYLREFTAQARQ-LTWFGVGLLAVTAFLMLVTIEKTFNVI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + L+ + + L + L V I + + ++
Sbjct: 120 WRVRQPRRGMSSFLLYWAILSLGPLLLGAGFAVSTYIASLS------LISGPDAVVGAKT 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ +L+ ++ +P + + L G +F+ I + + LF Y+ F Y
Sbjct: 174 LLAFTPLLSSIAAFTLLYAAVPNTRVPLRHALLGGLFSAILFEIAKALFGLYVRLFPGYH 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII-YYWRKKP 281
+Y A++ LV++Y+ + +LGAEL + WR++P
Sbjct: 234 LIYGAFATVPLFLVWIYLSWLIVLLGAELVYGLSQPRRWRRQP 276
>gi|284024929|ref|ZP_06379327.1| hypothetical protein Saura13_10091 [Staphylococcus aureus subsp.
aureus 132]
Length = 405
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISIFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|295690772|ref|YP_003594465.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
gi|295432675|gb|ADG11847.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
Length = 403
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 9/275 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
DI++ + A+A ++ LL++ P I +L G + V +
Sbjct: 79 LLGWRDIVWRTWREITVDRLPAVAGGVTFYTLLALIPAIGAFVSLYGLFADVRTVEQQLR 138
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYR 121
+ G +P + + + +++L++ + L S L + + ++ + L LN AY
Sbjct: 139 DMAGVFPPSVVQIVGEQMLRLASQGEAKLGLAFAFSLLLSVWSANASMRTLFDGLNIAYD 198
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R L+S+ + A V V +S V + PL L R L L R
Sbjct: 199 EEEKRHIVRRTLLSYAFTFCALVYAVAVSAVLIVTPLLLKAAR-----LSALDSYWAPIR 253
Query: 182 IYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
M + ++ F P+ +++ + G W++G++ F+ Y+ + +
Sbjct: 254 WLMVMAMTAVAFAVLYRFAPSRAQARWRWVWIGAATASGGWLIGSLGFSTYVNRVAHFDA 313
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L +I+ +V+++ + ++GAELNA +
Sbjct: 314 AYGPLGAIIAFMVWVWFSIMAILVGAELNAEIEHQ 348
>gi|319901760|ref|YP_004161488.1| tRNA-processing RNAse BN [Bacteroides helcogenes P 36-108]
gi|319416791|gb|ADV43902.1| tRNA-processing RNAse BN [Bacteroides helcogenes P 36-108]
Length = 439
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 96/270 (35%), Gaps = 4/270 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + I F
Sbjct: 34 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMENQIISGF 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G E + + + + + + N + + I+ NR ++V + RS
Sbjct: 94 GGPTETTEMMLRFVDSYLSQTKSGVFIGVGLVMLLWSVLNLINNMEITFNRIWQVKKARS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
Y F +LL + +V+ + + + + + L + +
Sbjct: 154 MYRKITDYFSMLLLMPILIVVSGGLSIFMSTMVKNIED----FTLLAPLGKFMIRLIPFV 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +++F+P K K L I + L+ V S Y+ +Y A+
Sbjct: 210 LTWCMFTALYVFMPNTKVKFSHALISGILAGTAHQAFQFLYISGQVWVSRYNAIYGSFAA 269
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L + + GAEL +
Sbjct: 270 LPLFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|218674258|ref|ZP_03523927.1| putative ribonuclease protein [Rhizobium etli GR56]
Length = 314
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 148/276 (53%), Positives = 205/276 (74%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF T I
Sbjct: 11 VLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSSTAI 70
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAYRV
Sbjct: 71 HLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAYRVQ 130
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R WY TRL S GYVL+A + +S + VA+PLAL Y R +FP + L I+++ RIY
Sbjct: 131 ETRPWYFTRLASLGYVLIAVIIFAAISILLVAVPLALDYARNWFPLFADTLDIVFSWRIY 190
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T++ L +GL+ +HL+LPA K ++ ++PGV+ T + W+ GA++F +Y+ TF+ Y+ YA
Sbjct: 191 GTLVVLTVGLLVMHLWLPAGKRRVFDVIPGVLLTLLLWLAGALIFAYYLATFANYTATYA 250
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLAS+M L+FLYM+G FI+GAE+NA++I + +
Sbjct: 251 GLASVMIVLIFLYMVGAIFIIGAEINAALIKFRVFR 286
>gi|221214918|ref|ZP_03587886.1| ribonuclease BN [Burkholderia multivorans CGD1]
gi|221165145|gb|EED97623.1| ribonuclease BN [Burkholderia multivorans CGD1]
Length = 442
Score = 148 bits (373), Expect = 1e-33, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLAFTGAAPSTSIVEWLLTLASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWMYLSWFIALLGAMVTSALPAIR 276
>gi|221197719|ref|ZP_03570765.1| ribonuclease BN [Burkholderia multivorans CGD2M]
gi|221204723|ref|ZP_03577740.1| ribonuclease BN [Burkholderia multivorans CGD2]
gi|221175580|gb|EEE08010.1| ribonuclease BN [Burkholderia multivorans CGD2]
gi|221181651|gb|EEE14052.1| ribonuclease BN [Burkholderia multivorans CGD2M]
Length = 442
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLAFTGAAPSTSIVEWLLTLASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWMYLSWFIALLGAMVTSALPAIR 276
>gi|170755009|ref|YP_001783041.1| YihY family protein [Clostridium botulinum B1 str. Okra]
gi|169120221|gb|ACA44057.1| YihY family protein [Clostridium botulinum B1 str. Okra]
Length = 285
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 62/264 (23%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F+E++ A++S ++ + ++SVFPF++F L G+L H ++ + P
Sbjct: 16 LANRFLEDEVLALSSQLAYALIISVFPFLMFVITLIGYLPIHS--EDLLLGLKEIMPSNT 73
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + I +++ L + S + + +S G A+ LNRAY V E RS+ +++
Sbjct: 74 YLLLKNTIEEIIYTQNGNLLSFSIIFTIWTASAGFRAVVRGLNRAYDVKERRSFIKVQIM 133
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + LV+ F+ V + I R + L
Sbjct: 134 TIFCTLGMAFVLVMSIFLLVFGKTIGRTLVYKLGFSLEFNRIWNLIRYIIMIGVTIFILA 193
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P+ + + M +LPG IF I+W++ ++ F+ Y+ F+ YS +Y + +++ LV+
Sbjct: 194 ALYYYTPSKRLRWMDVLPGAIFATIAWIIASMGFSFYVDNFNNYSRLYGSIGAVIVFLVW 253
Query: 255 LYMLGVFFILGAELNASMIIYYWR 278
LY+ + I G E+NA ++ +
Sbjct: 254 LYLTSIIVITGGEINALLVSSREK 277
>gi|322436851|ref|YP_004219063.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
gi|321164578|gb|ADW70283.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
Length = 386
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 107/271 (39%), Gaps = 5/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVF 67
I F E++ + A+ + L ++FP ++ + + G + + + +++ +
Sbjct: 87 LAIAKRTFHSFNEDNLLSRAAELGYYFLFALFPTLITASAILGLVVRNSTLYLKLLNYLA 146
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P K + + Q + A + +S G A++ +LN Y+V E R
Sbjct: 147 LVVPADAFKLVLETFTQTTTHSSGSKLIFGLAAGLWSASVGFSAIQDTLNIVYKVKETRP 206
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNGRIYA 184
++ + + +L S+ ++++ ++ L +I+
Sbjct: 207 YWKVKGAAILVTVLLSIIVILILGSMFTGSFVAHWLYTHIAQHQLALAVNVIVRFIAWSC 266
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L + ++ F P K PG WV+ +V+ Y+ F++YS Y
Sbjct: 267 AALLCVLLFAVIYYFAPDVKNKHWRWFTPGAAVGIGGWVLASVILRVYLHYFNSYSVTYG 326
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
L +++ L + YM G+ + GAE+N+ +
Sbjct: 327 SLGAVIILLTWFYMTGLMLLTGAEMNSEIEA 357
>gi|222053928|ref|YP_002536290.1| ribonuclease BN [Geobacter sp. FRC-32]
gi|221563217|gb|ACM19189.1| ribonuclease BN [Geobacter sp. FRC-32]
Length = 440
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 98/271 (36%), Gaps = 5/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ Y+ I+ I++F +++ AS +S + +LS+ PF + V
Sbjct: 26 IKRYWVKYLQIMALVIKNFWDDNCLLRASALSFTTILSIVPFFALTFAVLKGFDVQNKVE 85
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + + TI + + + + N +
Sbjct: 86 ---PYILEQVTAGSEELVDKIVTYINNTNMTSMGTIGLATLVVTAITLLGNIEEAFNVIW 142
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V RS +L + ++ V + V ++ L ++
Sbjct: 143 GVKGTRSLQRKFSDYLSVLLSGPLLMLAAISVTTTLQS--QSVVRWLLQTSYLGDVLLFS 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++++ L F+++ +P + K S L G + W + ++ V Y+
Sbjct: 201 FRLIPYISVWLALFFLYILIPNTRVKAKSALIGGVLAGTVWQAAQWGYLYFQVGVGKYNA 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y LA + +V++Y V + G E+ A+
Sbjct: 261 IYGTLALLPIFMVWIYTSWVIVLFGVEVVAA 291
>gi|161524966|ref|YP_001579978.1| ribonuclease BN [Burkholderia multivorans ATCC 17616]
gi|189350287|ref|YP_001945915.1| BN-like family ribonuclease [Burkholderia multivorans ATCC 17616]
gi|160342395|gb|ABX15481.1| ribonuclease BN [Burkholderia multivorans ATCC 17616]
gi|189334309|dbj|BAG43379.1| BN-like family ribonuclease [Burkholderia multivorans ATCC 17616]
Length = 442
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLAFTGAAPSTSIVEWLLTLASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWMYLSWFIALLGAMVTSALPAIR 276
>gi|118589631|ref|ZP_01547036.1| ribonuclease BN, putative [Stappia aggregata IAM 12614]
gi|118437717|gb|EAV44353.1| ribonuclease BN, putative [Stappia aggregata IAM 12614]
Length = 317
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 118/275 (42%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DI + +A+ ++ LL++FP I L+G + V ++++
Sbjct: 18 WLDIGVRVWNAVQRDHIDLIAAGVAFYGLLAIFPTITALTALSGLIVEPVEVSRQLELIE 77
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P ++ I + V GL I A Y +S G+ ++ LN AY VE
Sbjct: 78 SVLPHEASQIILAQAADVAGSENAGLSFALIIGLGIAIYSTSRGMASIMEGLNIAYDEVE 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ ++ + LL + V+ + +P+ +Y+ L I+ + R
Sbjct: 138 KRSFIALKVRTLAMALLLVLAFVLGLVSALLLPVIFSYLA----LPEWLERILSSARWII 193
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L GL FV+ F P+ +K I PG + + W+ + F+ Y+ F++Y+ +
Sbjct: 194 LGLLTVTGLSFVYRFGPSRTDAKWKWITPGAVVACLLWLAASYGFSVYVSNFASYNKTFG 253
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
LA ++ L++L++ +LGAELN M R
Sbjct: 254 SLAGVIILLMWLWISAYIVLLGAELNGEMEAQTRR 288
>gi|77361434|ref|YP_341009.1| ribonuclease protein [Pseudoalteromonas haloplanktis TAC125]
gi|76876345|emb|CAI87567.1| putative ribonuclease protein [Pseudoalteromonas haloplanktis
TAC125]
Length = 319
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 117/271 (43%), Gaps = 8/271 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+DI ++ +A+ ++ ALL++FP + ++ + + + +
Sbjct: 18 LLGWWDITKRIFTQMSRDNLSLVAAGVAFYALLAIFPALAALVSIYAYFASPTDIGAHLS 77
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYR 121
V PE + I +I + + L + + + SS G +AL + N +Y+
Sbjct: 78 QVIELLPESTGELILSQIASIAQSSSTSLSLSAIGTLILTIWSSSKGSQALITACNISYQ 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS++ +L+ F + + A V + + +P+ L V N+ L+I
Sbjct: 138 EYEKRSFFKAQLVRFLFSIGAIVVAIFALLIIGILPVVLNLV----GLKENIDLLITFIS 193
Query: 182 IYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L+ ++ + P K K I G + I W+V ++ F+ Y+ F++Y+
Sbjct: 194 WPLLAFTFNFALVLLYRYAPHRKPAKWRWITLGSVIATILWIVASIGFSFYVSKFASYNE 253
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y L ++ L++LY+ ILGA +NA+
Sbjct: 254 TYGSLGGVVIMLMWLYISAYIVILGATINAA 284
>gi|115351390|ref|YP_773229.1| putative ribonuclease BN [Burkholderia ambifaria AMMD]
gi|115281378|gb|ABI86895.1| tRNA-processing RNAse BN [Burkholderia ambifaria AMMD]
Length = 443
Score = 147 bits (372), Expect = 1e-33, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFSSFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNVQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAAPSTSIVEWLLALVSLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|163759906|ref|ZP_02166990.1| putative ribonuclease rnase bn (rbn) transmembrane protein [Hoeflea
phototrophica DFL-43]
gi|162282864|gb|EDQ33151.1| putative ribonuclease rnase bn (rbn) transmembrane protein [Hoeflea
phototrophica DFL-43]
Length = 317
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 133/271 (49%), Positives = 192/271 (70%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+I+DA+ HF ++DGWAMASH++LS L+++FPF++FG LA FLGA+ + T ++F
Sbjct: 40 SVIWDAVTHFNDDDGWAMASHVALSILMALFPFMIFGTALASFLGANAYAETASHLIFDT 99
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WPE IA PI++E+++VL V GL T+S LAAA+FS+NGVEALR+SLNRAYRV E R+WY
Sbjct: 100 WPESIAAPISNEVVKVLTVERGGLLTLSVLAAAFFSANGVEALRVSLNRAYRVTETRAWY 159
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+TR+ S +V++A + ++ +SF+ V PLAL R+F P + L+ + N RI L
Sbjct: 160 VTRIQSLLFVVVAVLVIMAISFLLVLAPLALKLARQFVPWMETLISAVDNWRILIAAAVL 219
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
IGLI HL+LP + K+ +LPG+ T ++W+ GA++F Y+ F+TY + YAGLASIM
Sbjct: 220 VIGLIVSHLWLPDGRRKLFDVLPGIGVTLVAWMAGALMFASYLKEFATYVSTYAGLASIM 279
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LVFLY++ FILGAE+NA+++ R K
Sbjct: 280 IALVFLYIVAAIFILGAEINAALLKAAERAK 310
>gi|114705037|ref|ZP_01437945.1| Ribonuclease BN family protein [Fulvimarina pelagi HTCC2506]
gi|114539822|gb|EAU42942.1| Ribonuclease BN family protein [Fulvimarina pelagi HTCC2506]
Length = 321
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D++ + F E +A+ I+ LL++FP I + G + Q + + + G
Sbjct: 25 DVLMRVKDRFDEHSVTLVAAGITFYILLALFPAITALVAIYGLVADPQTIQAQLSNLEGI 84
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I ++ ++ + L +S L + Y S+ GV+AL ++N AY+ + R
Sbjct: 85 VPAGALGIIHSQLERLTSQTESSLSIAFAVSILLSIYSSTKGVKALFKAMNIAYQEKDER 144
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ LIS +V+ + V +++ V IP L+ + P + +++
Sbjct: 145 GFIKQNLISMAFVVASIVLVILAIVTLVVIPSVLSLL----PLPAGVTILVLVVPPLVLA 200
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + F P +S + PG + T + WV+ ++ F+ Y + Y +
Sbjct: 201 LLAMAWIAGLFRFGPHRRSPTFKWLTPGAVLTILGWVIASIAFSFYASNVKNFDATYGSM 260
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
ASI+ L++ +++ + + GAELNA +
Sbjct: 261 ASIIVFLMWTWIMMIILLAGAELNAQLEHQ 290
>gi|90414677|ref|ZP_01222648.1| ribonuclease BN [Photobacterium profundum 3TCK]
gi|90324219|gb|EAS40794.1| ribonuclease BN [Photobacterium profundum 3TCK]
Length = 321
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 93/274 (33%), Gaps = 8/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + + A ++ LLS+ P I + + ++
Sbjct: 18 LKQTFAYLTYLNRRVKHDRLTIAAGSMAYVTLLSLVPMITVVLSALSAFPVFAGLGELLQ 77
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V + + + + + +A A + + A + + ++ +LN +RV
Sbjct: 78 NFVIENFVPAAGEVVKTYLNEFVAN-AGKMTAVGVGALFVVAMMLMSSIDQALNYIWRVH 136
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R I+ I + + L + + V + + +
Sbjct: 137 EKRRPVISFSIYWMVLTLGPILVGSSIAVSSYLGSL------NLLNSEAVNGLFQQTLRA 190
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + ++L +P K K L G + I + + F YI F +Y +Y
Sbjct: 191 LPVIMSSCAFLGLYLLVPNLKVKFSHALFGALVASILFELSKKGFALYISNFPSYQVIYG 250
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA I V++Y+ +LGAE+ AS+
Sbjct: 251 ALAVIPILFVWVYLCWCIVLLGAEITASLGERKQ 284
>gi|323489179|ref|ZP_08094411.1| putative ribonuclease BN [Planococcus donghaensis MPA1U2]
gi|323397066|gb|EGA89880.1| putative ribonuclease BN [Planococcus donghaensis MPA1U2]
Length = 298
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 114/270 (42%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F +++ +A+ + LL++ + L+ I+ +
Sbjct: 7 FVKELGNEFKKDNATTLAAAQAYYYLLAI--VPLLILLLSILPYLQIDPDEAIEFIRSIL 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P +A D I+ V+ P+ GL T L + +SN + A + N+AY + E RS++
Sbjct: 65 PGEVANTFQDTIVSVVTTPSGGLLTFGILGTLWSASNALTAFINATNQAYGIKETRSFFK 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ I+ G + V ++I + + + ++ +I R ++ +
Sbjct: 125 LKAIAIGLTIGMLVAVIIALVLPIFGGTIIEIIKSTLNLPEQTEIIFQVLRWVISVAVMS 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L ++ P +L G + + W V + F+ Y+ F +YS Y L ++
Sbjct: 185 LVLALMYKLAPNKSFPFKEVLIGAVIATVLWQVVSFGFSIYVSNFGSYSATYGSLGGLIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++ G+ ++GAE+NA + KK
Sbjct: 245 LMLWFFLTGLILVIGAEINAIIDRRRTAKK 274
>gi|270296464|ref|ZP_06202664.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270273868|gb|EFA19730.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 439
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 98/270 (36%), Gaps = 4/270 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + + I F
Sbjct: 34 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMESQIVNGF 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G E + + + + + + N + + I+ NR ++V + RS
Sbjct: 94 GGPTETTEVILQFVNSYLSQTKSGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVKKARS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
Y F +LL + LV+ + + + + + L + +
Sbjct: 154 MYRKITDYFSMLLLMPILLVVSGGLSIFMSTMVKNLED----FTLLAPVGKFMVRLIPFV 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +++F+P K K+ L I + L+ + S Y+ +Y A+
Sbjct: 210 LTWFMFTALYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGSFAA 269
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L + + GAEL +
Sbjct: 270 LPMFLLWLQVSWTICLFGAELTYAGQNIRN 299
>gi|317480349|ref|ZP_07939450.1| YihY family protein [Bacteroides sp. 4_1_36]
gi|316903524|gb|EFV25377.1| YihY family protein [Bacteroides sp. 4_1_36]
Length = 439
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 47/270 (17%), Positives = 98/270 (36%), Gaps = 4/270 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + + I F
Sbjct: 34 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAILFAIARGFGFDNLMESQIVNGF 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G E + + + + + + N + + I+ NR ++V + RS
Sbjct: 94 GGPTETTEVILQFVNSYLSQTKSGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVKKARS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
Y F +LL + LV+ + + + + + L + +
Sbjct: 154 MYRKITDYFSMLLLMPILLVVSGGLSIFMSTMVKNLED----FTLLAPVGKFMVRLIPFV 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +++F+P K K+ L I + L+ + S Y+ +Y A+
Sbjct: 210 LTWFMFTALYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGSFAA 269
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L + + GAEL +
Sbjct: 270 LPMFLLWLQVSWTICLFGAELTYAGQNIRN 299
>gi|304411738|ref|ZP_07393350.1| ribonuclease BN [Shewanella baltica OS183]
gi|307306210|ref|ZP_07585955.1| ribonuclease BN [Shewanella baltica BA175]
gi|304349926|gb|EFM14332.1| ribonuclease BN [Shewanella baltica OS183]
gi|306911083|gb|EFN41510.1| ribonuclease BN [Shewanella baltica BA175]
Length = 326
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 106/276 (38%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEGFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + + + +
Sbjct: 129 WRTKEKRSVVVAFSMYWMVLTLGPVLVGASLVASSYVISLKVFEAEAISGMLPIFIAR-- 186
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G I + + +G F Y+ F +Y
Sbjct: 187 ----LPMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFELGKKAFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALAVIPIIFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|52079254|ref|YP_078045.1| RNase YfkH [Bacillus licheniformis ATCC 14580]
gi|52784619|ref|YP_090448.1| YfkH [Bacillus licheniformis ATCC 14580]
gi|319646964|ref|ZP_08001192.1| YfkH protein [Bacillus sp. BT1B_CT2]
gi|52002465|gb|AAU22407.1| Possible RNase YfkH [Bacillus licheniformis ATCC 14580]
gi|52347121|gb|AAU39755.1| YfkH [Bacillus licheniformis ATCC 14580]
gi|317391023|gb|EFV71822.1| YfkH protein [Bacillus sp. BT1B_CT2]
Length = 271
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 66/267 (24%), Positives = 119/267 (44%), Gaps = 6/267 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + F +G + ++ ++ LLS+FPF++F L G+L VI ++
Sbjct: 2 SFLKELGWRFFLHEGPSKSAELAYFFLLSLFPFMIFLLTLIGYLPVK--TGDVIGLIEQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE I + + +GL + +AA + +SNG+ A+ + N AY V E RS+
Sbjct: 60 APEDTMSVIEETL----NTGNRGLLSFGIIAALWSASNGLNAIVRAFNHAYEVEENRSFI 115
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ RL S T+++ + V ++ L R + L L
Sbjct: 116 MVRLTSLLLTAAMVFTILVALLLPVFGRAIGHFIANLDGTPEMFLTAWSALRWGISPLVL 175
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I ++ F P + +LPG + W++ +VLF++Y+ F+ YS Y L I+
Sbjct: 176 LIVFTALYFFAPNKRLSFKFVLPGAVAATAGWILVSVLFSYYVSEFANYSATYGSLGGII 235
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+++ Y+ G+ ILG E+NA +
Sbjct: 236 VLMIWFYLSGMMIILGGEINALLHKRK 262
>gi|163857354|ref|YP_001631652.1| ribonuclease [Bordetella petrii DSM 12804]
gi|288559234|sp|A9IT56|Y3042_BORPD RecName: Full=UPF0761 membrane protein Bpet3042
gi|163261082|emb|CAP43384.1| Ribonuclease [Bordetella petrii]
Length = 452
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 97/272 (35%), Gaps = 9/272 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF-- 67
+ A + EE +AS ++ + +L + P + +L Q ++
Sbjct: 30 RVFRFAAQRADEEKLLQVASSLTFTTVLGIVPMLAVVLSLFTAFPVFQDFRLALEDFLAN 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ I D + Q A A L I S + + + N + V R
Sbjct: 90 SLMPPAVSDNIMDYLNQF-AYQASRLTAIGGAFLVVTSLLLIMTIDKTFNDIWHVTRQRP 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + V L V + + R+ + ++ I+ + ++
Sbjct: 149 LPQRALVYWAVVTLGPVVAGASLWATSFL------ARESLGLVRDVPEIVSLAISFLPLI 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+G + + +P L G T I + F +Y+ F TY+ +Y A+
Sbjct: 203 LTGLGFAALFVVVPNRHVYWRDALVGGFGTAIVLELMKAAFAYYLTRFPTYTVIYGAFAT 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L+++Y+ + + GA + AS + +
Sbjct: 263 LPIFLLWIYLSWLAVLFGATVAASAPLIRLGR 294
>gi|323489804|ref|ZP_08095029.1| transport protein [Planococcus donghaensis MPA1U2]
gi|323396542|gb|EGA89363.1| transport protein [Planococcus donghaensis MPA1U2]
Length = 299
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + + + D + + ++ LLS+FP ++F L +L + + +
Sbjct: 28 FLKELFQRIKDVDVPGLGAQLAFFFLLSIFPLLIFLVTLLPYLALSR--GEIFSFLEEVV 85
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + I +++VL GL + LA + +S G+ AL SLN +Y+V E R +
Sbjct: 86 PGTVYVLIESTVIEVLTTQNTGLLSFGILATIWSASLGMNALIKSLNLSYKVAENRPILL 145
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S +L L++ + + + F N L++ + R + +F
Sbjct: 146 ARAMSIILTVLLIFILIVALALPIFGEQLGRLIFSFLGLEANFLVVWNSVRFTIPAIVIF 205
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ P + I+S+L G F W++ + LF+ Y+ F +S Y + +I+
Sbjct: 206 VACAIIYWLAPNVRLNILSVLVGAAFAATGWLLTSYLFSIYVKNFGNFSATYGSIGAIIV 265
Query: 251 CLVFLYMLGVFFILGAELNASMIIYY 276
+++LY+ + ++G ++NA M
Sbjct: 266 LMLWLYVSAMILVIGGQINAVMKERR 291
>gi|255010345|ref|ZP_05282471.1| putative tRNA processing ribonuclease [Bacteroides fragilis 3_1_12]
gi|313148145|ref|ZP_07810338.1| ribonuclease BN [Bacteroides fragilis 3_1_12]
gi|313136912|gb|EFR54272.1| ribonuclease BN [Bacteroides fragilis 3_1_12]
Length = 439
Score = 147 bits (371), Expect = 2e-33, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 99/276 (35%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY + F ++ AS ++ S LL++ P + +A G + +
Sbjct: 28 KFSIYNIIKTIYLCVNRFNKDRIVNKASALTYSTLLAIVPILAIVFAIARGFGVSTLMES 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E + + + + + N V + I+ NR ++
Sbjct: 88 QFRDGFGGSTEATDVILQFVDSYLSQTKNGIFIGVGLVMLLWTVLNLVSNIEITFNRIWQ 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L + F L I+
Sbjct: 148 VKKGRSMYRKITDYFSMFLLMPILIVVSGGLSIFVGTMLKSMADFVL----LAPILKFLI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALISGILAGSAYQAFQFLYISSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPMFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|295136139|ref|YP_003586815.1| ribonuclease BN [Zunongwangia profunda SM-A87]
gi|294984154|gb|ADF54619.1| ribonuclease BN [Zunongwangia profunda SM-A87]
Length = 297
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 117/277 (42%), Gaps = 8/277 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+++I + + +++ ++ A L+VFP I+ +L G Q + I+ +
Sbjct: 22 WWEVIKEVKNEISADKVSIVSAGVAFYAFLAVFPAIMALISLYGLATDPQEIQRQINELS 81
Query: 68 GAWPEVIAKPIT---DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + + D LQ + + + ++ G L ++ AY +E
Sbjct: 82 AMMPRQAFEVLQQRVDVFLQTHGDQLGWGTVFGIIFSIWSANKGTNGLLTGVDIAYDTIE 141
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ + L++ + + + L++ + V P + + L +I R
Sbjct: 142 NHNIFKQYLMASVFTIGGLIMLILSMILIVGFPALVHKI----GLPAKLEDLISWSRWLL 197
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ I L V+ F PA K ++PG +F+ I W+ + F+ Y+ F Y +Y
Sbjct: 198 LAFLVSIFLCLVYKFAPARPKPTTRWVIPGALFSTIVWLAASYGFSFYVSNFGNYGEVYG 257
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++++ L++LY+ +LGAE+N ++ Y +K
Sbjct: 258 SISAVVVLLLWLYITCFIILLGAEINTEIVDYLIAEK 294
>gi|317403320|gb|EFV83834.1| membrane protein [Achromobacter xylosoxidans C54]
Length = 437
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 99/272 (36%), Gaps = 9/272 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF-- 67
+ EE +AS ++ + +L++ P + +L Q ++
Sbjct: 30 RAFVFTAQRADEEKLLQVASSLTFTTVLAIVPMLAVVLSLFTAFPVFQEFRVALEDFLTN 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ I D + Q A A L I S + + + N + V R
Sbjct: 90 SLMPPSVSDNIMDYLNQF-ARQASRLTAIGGGFLLVTSLLLIMTIDKAFNDIWHVTRQRP 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + + L V + + R+ + ++ ++ + ++
Sbjct: 149 LPQRALVYWAVITLGPVVAGASLWATSFV------ARESLGLVRDVPEVVSVAISFIPLV 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+G + + +P + L G T ++ V F +Y+ F TY+ +Y A+
Sbjct: 203 LTGLGFAALFVVVPNRQVLWRDALIGGCVTAVALEVMKSAFAYYLTRFPTYTVIYGAFAT 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L+++Y+ + +LGA L AS + +
Sbjct: 263 LPIFLLWIYLSWLAVLLGATLAASAPLIRLGR 294
>gi|222149946|ref|YP_002550903.1| ribonuclease transmembrane protein [Agrobacterium vitis S4]
gi|221736928|gb|ACM37891.1| ribonuclease transmembrane protein [Agrobacterium vitis S4]
Length = 298
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 138/279 (49%), Positives = 201/279 (72%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR Y ++ + +DA+ HF E+DGWAMASH++LS LL+VFPF++FG LAG LGA+ F P
Sbjct: 1 MRSYLGRLYKVAFDAVWHFTEDDGWAMASHVALSILLAVFPFLIFGTALAGLLGANTFAP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I +F WPE IAKPI+++++QVL +P GL TIS LAAAYF+SNGVEALR +LNRAY
Sbjct: 61 TAIHFIFDTWPEEIAKPISEQVVQVLTIPRGGLLTISVLAAAYFASNGVEALRTALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WYITRLIS G+V++ ++S + +A+P+AL + + FP L + L ++ N
Sbjct: 121 RVTETRPWYITRLISLGFVIMGVAAFAVISVLLIAVPIALRFAERQFPLLKDFLALVSNW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T++ L +GL HL+LPA + +++ +LPG+ T + W++GA+ F Y+ TF+ Y+
Sbjct: 181 SVLGTLILLAVGLTISHLWLPADRRRLIDVLPGICLTLLLWLLGALAFAAYLATFANYAA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLAS+M ++FLYMLGV F++GAE NA+++ + +
Sbjct: 241 TYAGLASVMVVIIFLYMLGVLFLIGAEFNAALMKFSRPR 279
>gi|114319682|ref|YP_741365.1| putative ribonuclease BN [Alkalilimnicola ehrlichii MLHE-1]
gi|122312407|sp|Q0ABB2|Y521_ALHEH RecName: Full=UPF0761 membrane protein Mlg_0521
gi|114226076|gb|ABI55875.1| tRNA-processing RNAse BN [Alkalilimnicola ehrlichii MLHE-1]
Length = 445
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 102/278 (36%), Gaps = 7/278 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTV 62
+ + D E F + A+ +S + LL++ P + G ++ +
Sbjct: 24 WLRVAVDFPLYVAERFRRDACLQNAATLSYTTLLALVPLLTIGLSIFAAFPVFSGLTEQM 83
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+D++F + + + A GL + LA + + A+ ++N +RV
Sbjct: 84 LDLLFENLVPASTAVVQQHLEDFVG-RAAGLTVVGLLALMVSALLMMAAIDRAMNDIWRV 142
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R ++ + + LA + + + + + L L +
Sbjct: 143 QQRRRPLHGFMVYWTVLTLAPILMGASLGISSYVISVTRF-----GELEALSGLQGLLLA 197
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+A + F++ +P + + L G + + F Y+ TY +Y
Sbjct: 198 GMPFVAETVAFTFLYAAVPNFRVPLRHALLGGLLAAALFEAAKGGFGWYVANIPTYEAIY 257
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA++ L++LY+ V ++GAE ++ Y +
Sbjct: 258 GALAALPIFLIWLYLSWVVVLVGAEFTQALASYSVARH 295
>gi|39997555|ref|NP_953506.1| ribonuclease BN [Geobacter sulfurreducens PCA]
gi|39984446|gb|AAR35833.1| ribonuclease BN, putative [Geobacter sulfurreducens PCA]
Length = 397
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 93/263 (35%), Gaps = 5/263 (1%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
+F+++ AS ++ S LLS+ PF + LG + + +
Sbjct: 3 NFMDDQCLLHASALTYSTLLSIVPFFALAFAVLKGLGVQNTLE---PFILDQVAAGSHEI 59
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + L + + + + + + N + V E RS Y
Sbjct: 60 VDRIVTYINNTKVGSLGAVGLVTLVVSTVTLLGNIEETFNSIWGVRETRSLYRRFSDYLS 119
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
V+ + + V + ++ L ++ +++++ L+F++
Sbjct: 120 VVVFGPILIFAAISVTTTLE--SQKAVQWLIGTAYLGDVLVAAFRLVPYVSIWLALVFLY 177
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+ +P K + S L G + W + H+ V + Y+ +Y LA + +++LY
Sbjct: 178 MLIPNTKVRFRSALVGGVIAGTLWQAAQWGYIHFQVGVAKYNAIYGTLAVLPVFMIWLYA 237
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
+ G E+ + +
Sbjct: 238 SWSIVLFGVEVVYAHQHRRTFRH 260
>gi|167762332|ref|ZP_02434459.1| hypothetical protein BACSTE_00686 [Bacteroides stercoris ATCC
43183]
gi|167699975|gb|EDS16554.1| hypothetical protein BACSTE_00686 [Bacteroides stercoris ATCC
43183]
Length = 439
Score = 147 bits (370), Expect = 2e-33, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 97/273 (35%), Gaps = 4/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + I
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMESQIV 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
FG E + + + + N + + I+ NR ++V +
Sbjct: 91 QGFGGPSETTEVIFQFVNSYLSQTKNGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVKK 150
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS Y F +LL + LV+ + + + L V L I
Sbjct: 151 ARSMYRKITDYFSMLLLIPLLLVVSGGLSIFMSTMLKNVTD----FTLLAPIGKFLIRLI 206
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ ++ +++F+P K K+ L I + L+ + S Y+ +Y
Sbjct: 207 PFVLTWVMFTALYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L++L + + GAEL +
Sbjct: 267 FAALPMFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|330991211|ref|ZP_08315163.1| Putative ribonuclease-like protein yfkH [Gluconacetobacter sp.
SXCC-1]
gi|329761704|gb|EGG78196.1| Putative ribonuclease-like protein yfkH [Gluconacetobacter sp.
SXCC-1]
Length = 313
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 7/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V ++ + V + A+ + A LS+FP + +L G L Q V + V+
Sbjct: 19 VRQVLRQVARNIVSDQITLAAAGCAFYATLSLFPAMSTLISLYGLLFDLQTVEPQLVVLR 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVE 124
P I D I ++A L + A + +S +L +++N AY E
Sbjct: 79 NLLPPSAYGVIGDRIHLLVAESHSSLTLNLIISTTIATWSASAATRSLIMAMNVAYNTPE 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA---LGNLLLIIWNGR 181
RS+ + ++ G + ++ + VA+P + Y+ + G++ L+I G
Sbjct: 139 TRSFVRFQAMAMGLTFCSICGGILTLALMVALPFLIDYLPEHLSLAPPPGSVELLIHMGG 198
Query: 182 IYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L + ++ F P + ILPG + + W++ + F++Y+ + YS
Sbjct: 199 PILMLLFVLSLCSVLYRFGPNRPHTYWRCILPGSVGATLLWLLSSSGFSYYVSHIAGYSA 258
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L + + +++ Y+ +LGAELNA + I
Sbjct: 259 TYGPLGAFIAIMMWFYVSAYVVLLGAELNAGLEI 292
>gi|60682237|ref|YP_212381.1| putative tRNA processing ribonuclease [Bacteroides fragilis NCTC
9343]
gi|253564684|ref|ZP_04842140.1| ribonuclease [Bacteroides sp. 3_2_5]
gi|265766340|ref|ZP_06094381.1| ribonuclease BN [Bacteroides sp. 2_1_16]
gi|60493671|emb|CAH08460.1| putative tRNA processing ribonuclease [Bacteroides fragilis NCTC
9343]
gi|251946149|gb|EES86526.1| ribonuclease [Bacteroides sp. 3_2_5]
gi|263254008|gb|EEZ25473.1| ribonuclease BN [Bacteroides sp. 2_1_16]
gi|301163715|emb|CBW23269.1| putative tRNA processing ribonuclease [Bacteroides fragilis 638R]
Length = 439
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 99/276 (35%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY + F ++ AS ++ S LL++ P + +A G + +
Sbjct: 28 KFSIYNIIKTIYLCVNRFNKDRIVNKASALTYSTLLAIVPILAIVFAIARGFGVSTLMES 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E + + + + + N V + I+ NR ++
Sbjct: 88 QFRDGFGGSTEATDIILQFVDSYLSQTKNGIFIGVGLVMLLWTVLNLVSNIEITFNRIWQ 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L + F L I+
Sbjct: 148 VKKGRSMYRKITDYFSMFLLMPILIVVSGGLSIFVGTMLKSMADFVL----LAPILKFLI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALISGILAGSAYQAFQFLYISSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPMFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|170703573|ref|ZP_02894322.1| ribonuclease BN [Burkholderia ambifaria IOP40-10]
gi|170131516|gb|EDT00095.1| ribonuclease BN [Burkholderia ambifaria IOP40-10]
Length = 443
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFSSFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNVQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAAPSTSIVEWLLALVSLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|172060429|ref|YP_001808081.1| ribonuclease BN [Burkholderia ambifaria MC40-6]
gi|171992946|gb|ACB63865.1| ribonuclease BN [Burkholderia ambifaria MC40-6]
Length = 443
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFSSFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNVQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAAPSTSIVEWLLALVSLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|53714041|ref|YP_100033.1| ribonuclease BN [Bacteroides fragilis YCH46]
gi|52216906|dbj|BAD49499.1| ribonuclease BN [Bacteroides fragilis YCH46]
Length = 439
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 99/276 (35%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY + F ++ AS ++ S LL++ P + +A G + +
Sbjct: 28 KFSIYNIIKTIYLCVNRFNKDRIVNKASALTYSTLLAIVPILAILFAIARGFGVSTLMES 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
FG E + + + + + N V + I+ NR ++
Sbjct: 88 QFRDGFGGSTEATDIILQFVDSYLSQTKNGIFIGVGLVMLLWTVLNLVSNIEITFNRIWQ 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS Y F LL + +V+ + + + L + F L I+
Sbjct: 148 VKKGRSMYRKITDYFSMFLLMPILIVVSGGLSIFVGTMLKSMADFVL----LAPILKFLI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ +++F+P K K L I ++ L+ + S Y+ +
Sbjct: 204 RLIPFVLTWLMFTGLYIFMPNTKVKFKHALISGILAGSAYQAFQFLYISSQLWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A++ L++L + + GAEL +
Sbjct: 264 YGSFAALPMFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|154685267|ref|YP_001420428.1| YfkH [Bacillus amyloliquefaciens FZB42]
gi|154351118|gb|ABS73197.1| YfkH [Bacillus amyloliquefaciens FZB42]
Length = 279
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + F +G + ++ ++ LLS+FP ++F L +L V+ V
Sbjct: 2 SFIKELFARFSLHEGQSKSAELAYFFLLSLFPLMIFMLTLTAYLPISA--EDVLGAVDQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + Q L + GL + +A + +SNG+ A+ + N AY V E RS+
Sbjct: 60 APDSAMSMVKSITEQTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + VT++I + V F A G L + R + L L
Sbjct: 120 IIRLTSIFLTIAMVVTILIALLLPVFGREIGMLAADFIGASGLFLQVWSVVRWGISPLIL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G ILG E+NA +
Sbjct: 240 VLMIWFYLTGTLLILGGEINALLHKRKK 267
>gi|308172652|ref|YP_003919357.1| integral inner membrane protein [Bacillus amyloliquefaciens DSM 7]
gi|307605516|emb|CBI41887.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus amyloliquefaciens DSM 7]
Length = 279
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + F +G + ++ ++ LLS+FP I+F L +L V+ V
Sbjct: 2 SFMKELFARFSLHEGQSKSAELAYFFLLSLFPLIIFILTLTAYLPISA--EDVLGAVDQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + Q L + GL + +A + +SNG+ A+ + N AY V E RS+
Sbjct: 60 APDSAMSMVKSITEQTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + VT++I + V F A G L + R + L L
Sbjct: 120 ILRLTSIFLTIAMVVTILIALLLPVFGREIGLLAADFIGAPGLFLKVWSVVRWGISPLIL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G ILG E+NA +
Sbjct: 240 VLMIWFYLTGTLLILGGEINALLHKRKK 267
>gi|116494587|ref|YP_806321.1| ribonuclease BN-like family protein [Lactobacillus casei ATCC 334]
gi|191638025|ref|YP_001987191.1| YihY family protein [Lactobacillus casei BL23]
gi|301066135|ref|YP_003788158.1| ribonuclease BN-like family enzyme [Lactobacillus casei str. Zhang]
gi|116104737|gb|ABJ69879.1| Ribonuclease BN-like family enzyme [Lactobacillus casei ATCC 334]
gi|190712327|emb|CAQ66333.1| YihY family protein [Lactobacillus casei BL23]
gi|300438542|gb|ADK18308.1| Ribonuclease BN-like family enzyme [Lactobacillus casei str. Zhang]
gi|327382107|gb|AEA53583.1| Methionine aminopeptidase Map [Lactobacillus casei LC2W]
gi|327385249|gb|AEA56723.1| Methionine aminopeptidase Map [Lactobacillus casei BD-II]
Length = 335
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ AI E + A+ ++ LLS+FP I+F AN + G + + A
Sbjct: 42 FVKLAINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGL--TYKGLAAYLTQAI 99
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I +L + GL I A+A + +S GV L++ N+ Y V +++ I
Sbjct: 100 PSNVMNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFII 159
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL+S + + + VF L ++ + L R T+ ALF
Sbjct: 160 QRLLSMLMTFTLIIVMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTITALF 219
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + + +
Sbjct: 220 VIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGTFIA 279
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L + + GA +NA Y+ +
Sbjct: 280 IMLWLNFSALVLLWGAVINALTAEYFIGR 308
>gi|254472479|ref|ZP_05085879.1| YihY family protein [Pseudovibrio sp. JE062]
gi|211958762|gb|EEA93962.1| YihY family protein [Pseudovibrio sp. JE062]
Length = 296
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 103/276 (37%), Positives = 163/276 (59%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + ++ DA+ HF +DG+A+ASH++LS+L+++FPF++F A +GFLG + +
Sbjct: 4 RGLWGKSYQVLADALGHFNSDDGYAVASHVALSSLMALFPFLIFVAAFSGFLGLNSVAQS 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+++F WPE +A P++ EI VL P L T + +FSSNGVEA+R+ LNRAYR
Sbjct: 64 ATELIFDVWPERVAGPVSGEIKAVLTQPRGDLLTFGVVVTLWFSSNGVEAMRVGLNRAYR 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RSW+ R S VL+ + L++ +F+ V PLA + P + R
Sbjct: 124 VRDNRSWFFCRTQSILAVLIGTAVLMVSTFLIVFGPLAWEWAVHLAPVMEKFSYKANIVR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T L L L+ H++LPA + + + +LPG+ T I W+V F Y+ ++ Y ++
Sbjct: 184 YGITSLLLLFALLAAHMYLPAGRRRFLEVLPGIALTMILWIVAGTAFGAYLARWANYVSL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
YAGLA IMT ++F+Y+ V FILG E NA+++
Sbjct: 244 YAGLAGIMTAIIFMYLTAVIFILGGEFNAALMRVRR 279
>gi|170732784|ref|YP_001764731.1| ribonuclease BN [Burkholderia cenocepacia MC0-3]
gi|169816026|gb|ACA90609.1| ribonuclease BN [Burkholderia cenocepacia MC0-3]
Length = 442
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + LL++ P + L ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWLLALASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|124383383|ref|YP_001026405.1| ribonuclease BN [Burkholderia mallei NCTC 10229]
gi|126448742|ref|YP_001080322.1| tRNA-processing ribonuclease BN [Burkholderia mallei NCTC 10247]
gi|254358675|ref|ZP_04974948.1| tRNA-processing ribonuclease BN [Burkholderia mallei 2002721280]
gi|124291403|gb|ABN00672.1| ribonuclease BN [Burkholderia mallei NCTC 10229]
gi|126241612|gb|ABO04705.1| tRNA-processing ribonuclease BN [Burkholderia mallei NCTC 10247]
gi|148027802|gb|EDK85823.1| tRNA-processing ribonuclease BN [Burkholderia mallei 2002721280]
Length = 436
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 95/273 (34%), Gaps = 6/273 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFASKAKGLTTAGLIVLVFTAVMMM-TIESAFNLIWRVR 126
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 127 KPRPFAQRVLAYWALITLGPLLFGVSLSMSSYLFTKSLAFAGSTSTPPVFEWLLAAASLP 186
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 187 LTVL----AFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 242
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L++LY+ + GA + +++
Sbjct: 243 AFATVPMFLLWLYLSWFVTLAGAMIASALPAIR 275
>gi|328552413|gb|AEB22905.1| integral inner membrane protein with ribonuclease fold [Bacillus
amyloliquefaciens TA208]
gi|328910764|gb|AEB62360.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus amyloliquefaciens LL3]
Length = 279
Score = 146 bits (369), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + F +G + ++ ++ LLS+FP I+F L +L V+ V
Sbjct: 2 SFMKELFARFSLHEGQSKSAELAYFFLLSLFPLIIFILTLTAYLPISA--EDVLGAVDQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + Q L + GL + +A + +SNG+ A+ + N AY V E RS+
Sbjct: 60 APDSAMSMVKSITEQTLNKRSGGLLSFGIIAVIWSASNGMNAIVRAFNHAYEVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + VT++I + V F A G L + R + L L
Sbjct: 120 IIRLTSIFLTIAMVVTILIALLLPVFGREIGLLAADFIGAPGLFLQVWSVVRWGISPLIL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++F P + + +LPG +F W++ ++LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFTALYIFAPNKRLSLRFVLPGAVFAAAGWIIVSMLFSFYVGTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G ILG E+NA +
Sbjct: 240 VLMIWFYLTGTLLILGGEINALLHKRKK 267
>gi|54310542|ref|YP_131562.1| ribonuclease BN [Photobacterium profundum SS9]
gi|67460675|sp|Q6LLR8|Y3489_PHOPR RecName: Full=UPF0761 membrane protein PBPRA3489
gi|46914985|emb|CAG21760.1| putative ribonuclease BN [Photobacterium profundum SS9]
Length = 319
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 90/267 (33%), Gaps = 8/267 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAW 70
+ + A ++ LLS+ P I + ++ V +
Sbjct: 23 LTYLNRRIKHDRLTIAAGSMAYVTLLSLVPMITVVLAALSAFPVFAGLGELLQNFVIENF 82
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + + + +A A + + A + + ++ +LN +RV E R I
Sbjct: 83 VPAAGEVVKTYLNEFVAN-AGKMTAVGIGALFVVAMMLMSSIDHALNYIWRVHEKRRPVI 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ I + + L + + V + + + ++
Sbjct: 142 SFSIYWMVLTLGPILVGSSIAVSSYLGSL------NLLNSEAVNGLFQQTLRALPVIMSS 195
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++L +P K K L G + + + F YI F +Y +Y LA I
Sbjct: 196 SAFLGLYLLVPNLKVKFSHALLGALVASSLFELSKKGFALYISNFPSYQVIYGALAVIPI 255
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
V++Y+ +LGAE+ AS+
Sbjct: 256 LFVWVYLCWCIVLLGAEITASLGERKQ 282
>gi|329955890|ref|ZP_08296693.1| YihY family protein [Bacteroides clarus YIT 12056]
gi|328525270|gb|EGF52320.1| YihY family protein [Bacteroides clarus YIT 12056]
Length = 439
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 96/273 (35%), Gaps = 4/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + I
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMESQIV 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
FG E + + + + + N + + I+ NR ++V +
Sbjct: 91 KGFGGPSETTEVIFQFVNSYLSQTKSGIFIGVGLIMLLWTVLNLINNMEITFNRIWQVKK 150
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS Y F +LL + LV+ + + + L V L I
Sbjct: 151 ARSMYRKITDYFSMLLLIPILLVVSGGLSIFMSTMLKNVAD----FTLLAPIGKFLVRLI 206
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + +++F+P K K L I + L+ + S Y+ +Y
Sbjct: 207 PFVLTWFMFTALYVFMPNTKVKFKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L++L + + GAEL +
Sbjct: 267 FAALPMFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|288553956|ref|YP_003425891.1| hypothetical protein BpOF4_04675 [Bacillus pseudofirmus OF4]
gi|288545116|gb|ADC48999.1| hypothetical protein BpOF4_04675 [Bacillus pseudofirmus OF4]
Length = 276
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 62/270 (22%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +E + ++ + +LS+FP ++F L + + + V +++
Sbjct: 5 SFMKHFMEQLKTDPIPDWSATFAYYFMLSIFPLLIFMIALLPYFQLN--IDQVYQILYDY 62
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P +A + IL+V++ P GL + +AA + +SNGV AL ++NRAY + E R++
Sbjct: 63 VPSDLADLFGNTILEVISHPQGGLVSFGVIAAMWSASNGVNALIRAVNRAYGIEETRNFL 122
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL+S L +V + V L + + F + R + +
Sbjct: 123 SLRLLSILLTLCMIFVVVTTLLLPVFGKLIINGMEYLFAVPPETAEFLNVLRWIIGIGLM 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L+F++ P K K ++ G + I W + ++LF++Y+ F YS Y L ++
Sbjct: 183 TLVLMFLYWAAPNVKLKFKQVIIGALSATIGWQIISLLFSYYVTNFGNYSATYGSLGGVI 242
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ ++ G+ I+G E+NA++ K
Sbjct: 243 ILMLWFFLTGLIIIVGGEINATIFHQKRAK 272
>gi|167562990|ref|ZP_02355906.1| YihY family protein [Burkholderia oklahomensis EO147]
Length = 428
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 93/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQNSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + + + + + N +RV
Sbjct: 68 GFLADHLMPAQFNSQIFKYLNQFAAKAKGLTTAGLIVLVVTAVMTMMTVESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTKSLAFAGSTSTPPIFEWLLTAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAAVGGVCAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + GA + +++
Sbjct: 244 AFATVPMFLLWMYLSWFVTLAGAMIASALPAIR 276
>gi|157373443|ref|YP_001472043.1| ribonuclease BN [Shewanella sediminis HAW-EB3]
gi|157315817|gb|ABV34915.1| putative ribonuclease BN [Shewanella sediminis HAW-EB3]
Length = 298
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 102/265 (38%), Gaps = 8/265 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIA 75
+ E+ A H++ LLS+ P + ++ + + ++ +
Sbjct: 6 QRLAEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFSGIRGQIEGFIYNNFLPAAG 65
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + ++ +KG + A + + A+ +LN +R E RS ++ +
Sbjct: 66 DTVQVYINEFVSNASKG-TAVGIAALMVVAIMLISAIDKALNNIWRTTEKRSMVVSFSMY 124
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ + L V + + + +L ++ M +
Sbjct: 125 WMVLTLGPVLMGASLVATSYVVSLKVFNGS------DLSGVVPVLVERLPMFFSVATFLL 178
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K K L G I + + G F Y+ F TY +Y LA+I +++
Sbjct: 179 IYMVVPNIKVKFFHALLGAIVAALLFEFGKKGFAIYLTKFPTYEAIYGALATIPILFMWV 238
Query: 256 YMLGVFFILGAELNASMIIYYWRKK 280
Y+ + +LGAE+ A+M Y +++
Sbjct: 239 YLSWIIVLLGAEITAAMPEYLDKRQ 263
>gi|110834404|ref|YP_693263.1| ribonuclease BN-like family protein [Alcanivorax borkumensis SK2]
gi|110647515|emb|CAL16991.1| Ribonuclease BN-like family protein [Alcanivorax borkumensis SK2]
Length = 458
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 100/280 (35%), Gaps = 7/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
+ F + + F E+ A+ ++ + L ++ P + + + A
Sbjct: 40 QARFNSIKAFFVLLVRQFNEDGCRQSAAALTYTTLFAIVPVMTVSFVVLSSVPALQGKSA 99
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + F + + D + A A L + + S + + +LNR +
Sbjct: 100 QLQEWAFEYFVPSAGNMLLDHLQSF-AKQATNLTVLGIVFLVVTSVLMLSTVEQTLNRIW 158
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V R ++ L+ + + L + L + + + + F + L +
Sbjct: 159 KVQTPRKGLVSLLMYWALLSLGPICLGLGLAITSYLTS-----QAIFSDTVSYLGGVRLW 213
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L L ++ +P + G + + + FT +I +Y
Sbjct: 214 LAVLPFLFTTAMLTLMYTVVPNTTVPFRQGVLGAAMAALLFELAKGAFTFFIKQAPSYQV 273
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++Y+ + GAEL +++++ ++
Sbjct: 274 VYGAFAAVPVFLLWIYISWTIVLGGAELVRALVVFQEHQR 313
>gi|308270567|emb|CBX27179.1| hypothetical protein N47_A12080 [uncultured Desulfobacterium sp.]
Length = 445
Score = 146 bits (368), Expect = 3e-33, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 102/269 (37%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R II A + FV + AS ++ +LLSV P + +A + +
Sbjct: 30 LRRILIKHLRIIIIASKEFVYDKCPLRASALTYYSLLSVVPVVAMAFAIAKGFKLQELLE 89
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I F ++ + I + + + + + N + + + N
Sbjct: 90 AEIIEKFSGQEAMMMQIIEFSRNMLKDTKGGIIAGVGVVVLLWAVINVLSQIEDTFNDIS 149
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS+ +L+ + L++ V I L + + LG ++
Sbjct: 150 GVKKGRSFGRKFSDYLSLILIGPLLLIMSGSAMVLISTHLPQITQKIALLGIFSPLVAII 209
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++I F+++F+P K S L I +V+ L+ + + + Y+T
Sbjct: 210 IKVLPYCFIWILFTFIYIFMPNQKVPFFSGLIAGIAAGTIFVIVQKLYIFFQIGVAKYNT 269
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y A++ L+++ + + GAE++
Sbjct: 270 VYGSFAALPLFLLWMQLSWFIMLFGAEIS 298
>gi|269103703|ref|ZP_06156400.1| ribonuclease BN [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163601|gb|EEZ42097.1| ribonuclease BN [Photobacterium damselae subsp. damselae CIP
102761]
Length = 322
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 96/269 (35%), Gaps = 8/269 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVF 67
F + + A ++ LLS+ P I + Q + V+ V
Sbjct: 36 FAYFRYLFQRINHDRLTVTAGSMAYVTLLSLVPLITVVLSALSSFPVFQGLGEVLQNFVI 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + + + Q +A A + + A + + ++ +LN +RV E R
Sbjct: 96 ENFVPAAGEVVKTYLNQFVAN-AGKMTAVGIGALFVVAMMLISSIDTALNYIWRVSEKRR 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
I+ I + + L + + V + + ++ + ++
Sbjct: 155 PVISFSIYWMVLTLGPILVGSSLAVSSYLGSL------NIMGSDAVNGLLQQSLRWLPVM 208
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++L +P K + + G + + + F YI F +Y +Y LA
Sbjct: 209 MSTMAFLGLYLLVPNTKVRFHHAVIGAGCASLLFELSKKGFALYITNFPSYQVIYGALAV 268
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
I V++Y+ +LGAE+ AS+
Sbjct: 269 IPILFVWVYLCWCIVLLGAEITASLGERK 297
>gi|239981438|ref|ZP_04703962.1| hypothetical protein SalbJ_18513 [Streptomyces albus J1074]
gi|291453289|ref|ZP_06592679.1| membrane protein [Streptomyces albus J1074]
gi|291356238|gb|EFE83140.1| membrane protein [Streptomyces albus J1074]
Length = 336
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 49/269 (18%), Positives = 99/269 (36%), Gaps = 3/269 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + F +D A+ ++ A+L+V P ++ G + + + V
Sbjct: 20 WWVALRRTPGAFWRDDVSDFAAALTYYAILAVLPALLVVVIAFGLV-SPDTAERFVGQVT 78
Query: 68 GAWPEVIAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + +V+ A L +A + +S+ + R +L+R Y V +
Sbjct: 79 AWAPGGSGASLREVLTRVVRVDSTAWTLLVTGGASALWSASSYLAVSRRALHRMYGVRDR 138
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + L L++ S + + + + + R
Sbjct: 139 RSPWGKAHRIVATALALLALLLVSSLLLMLTEPVAESIGRLLGLDAGVAWAWSVLRWPLL 198
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + ++ V P A + +PG W+ + Y STYS +Y L
Sbjct: 199 LCLVACLVVVVFRNGPVAARRRAHSIPGGALAATLWLTASAGLALYASVLSTYSRLYGSL 258
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A I+ LV+L++ V +LGA+ A +
Sbjct: 259 AGIVVFLVWLWLSNVALLLGAQFTAELCR 287
>gi|225025891|ref|ZP_03715083.1| hypothetical protein EUBHAL_00119 [Eubacterium hallii DSM 3353]
gi|224956788|gb|EEG37997.1| hypothetical protein EUBHAL_00119 [Eubacterium hallii DSM 3353]
Length = 325
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 63/272 (23%), Positives = 129/272 (47%), Gaps = 2/272 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ +++++ D ++ ++ A + + LLS+FPF++F L ++ +
Sbjct: 4 RKRIKNLYELVMDFLKKCSDDHVGAFGAMSAFFILLSIFPFMIFLLTLTRYIPFSK--DD 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+I ++ I + ++ + IS +AA + SS GV ++ I LN Y
Sbjct: 62 IIVILTRMISFEEGSLIKSIVNEIYRKTGTTVSAISIIAALWSSSRGVYSIVIGLNSVYD 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ E R+++ RL S Y LL ++ + +M ++V +Y + FP + +L + R
Sbjct: 122 IDENRNYFAIRLFSLVYTLLFALMISVMLVMWVFGNSLYSYFLQKFPFVVPILGYFMHKR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I +++ L + + ++ ++P S PG + + WV +V + Y+ F+ +S +
Sbjct: 182 IIFSLIFLTLLFMIIYKWIPNRVSSFRKQFPGALIATLGWVAVSVGCSIYMDNFTNFSYI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y +A IM L++LY GAE+N +
Sbjct: 242 YGSMAGIMILLLWLYFCMSMVFYGAEVNYFLE 273
>gi|15966391|ref|NP_386744.1| putative ribonuclease RNase BN (RBN) transmembrane protein
[Sinorhizobium meliloti 1021]
gi|307313022|ref|ZP_07592649.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|307321028|ref|ZP_07600434.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|15075662|emb|CAC47217.1| Probable transporter [Sinorhizobium meliloti 1021]
gi|306893303|gb|EFN24083.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|306899341|gb|EFN29975.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 291
Score = 146 bits (368), Expect = 4e-33, Method: Composition-based stats.
Identities = 143/278 (51%), Positives = 195/278 (70%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG LA FLGA QF
Sbjct: 1 MPAFVRIIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALASFLGADQFAQ 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + ++F WPE IAKP+ DE+++VL +P L TIS LAAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHLIFDTWPESIAKPVADEVVRVLTIPRGSLLTISVLAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R WY+TRL S G+VL A + L +S + VA+PLA+ ++FP L L+ + +
Sbjct: 121 RVAESRYWYVTRLASLGFVLGAVLILAALSILLVAVPLAVRNADQWFPWLDALMAAVDDW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T+ L GL+ HL+LPA ++ +LPG+ T + W VGA F YI FS Y T
Sbjct: 181 GLPLTLTMLTAGLLVAHLWLPAGHRNVVDVLPGIFLTLVLWSVGAYAFASYIANFSNYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGLASIM LVFLYMLG FI+GAE+NA+++ Y +
Sbjct: 241 TYAGLASIMIVLVFLYMLGAIFIIGAEINAAILKYKVK 278
>gi|16264680|ref|NP_437472.1| hypothetical protein SM_b21356 [Sinorhizobium meliloti 1021]
gi|307318683|ref|ZP_07598116.1| ribonuclease BN [Sinorhizobium meliloti AK83]
gi|15140818|emb|CAC49332.1| conserved hypothetical membrane protein [Sinorhizobium meliloti
1021]
gi|306895710|gb|EFN26463.1| ribonuclease BN [Sinorhizobium meliloti AK83]
Length = 330
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 120/270 (44%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + EE +A+ +S LLS+FP + ++ G + + T + ++
Sbjct: 36 DVFWRVFSEIGEERVMLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIGTHVGILQAL 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P I D++ + L + + + ++NG+ AL ++N AY E R
Sbjct: 96 LPADSYGLIMDQLETLTTQKPSTLGIGFFVSLSISLWLAANGIAALFDAMNVAYGEREKR 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L+ + A + V + +P LAYV + L+ R A +
Sbjct: 156 GFLSRTLLCLAFTFAALLFAVALIAAIGVVPAVLAYV----WVDRWVELVTRAARWPAVL 211
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + G I ++ F P+ ++K+ + G +F+ + W+ + LF++Y+ F+ Y+ Y L
Sbjct: 212 LLVTFGTILIYRFGPSRERAKLRWLNWGAVFSTLFWLAASWLFSYYLEHFANYNATYGAL 271
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
++ + ++++ + I+GA +NA +
Sbjct: 272 GALAGLMTWVWISVMILIIGALINAELEHQ 301
>gi|114561519|ref|YP_749032.1| ribonuclease BN [Shewanella frigidimarina NCIMB 400]
gi|122300991|sp|Q088X1|Y331_SHEFN RecName: Full=UPF0761 membrane protein Sfri_0331
gi|114332812|gb|ABI70194.1| tRNA-processing RNAse BN [Shewanella frigidimarina NCIMB 400]
Length = 320
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 108/273 (39%), Gaps = 8/273 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TV 62
+F ++ + + E+ A H++ LLS+ P + ++ + + +
Sbjct: 13 FFSGIWQFLLHLKQRLAEDQINIRAGHLAYVTLLSLVPMLAVTMSMLSAFPVFKGIRGNI 72
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ + + I + +A +KG + +A + + + A+ +LN +R+
Sbjct: 73 EGFIYNNFIPAAGDTVQVHINEFVANASKG-TFVGIIALVFVAIMLISAIDKALNNIWRI 131
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS+ ++ + + + L V + + L ++
Sbjct: 132 TEKRSYVVSFSMYWMVLTLGPVLIGASLVATSYVVSLEVVAGTELSGLVPWIV------E 185
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ ++ +++ +P K + L G I + + G F Y+ F +Y +Y
Sbjct: 186 RLPLIFSAASILLLYMVVPNKKVHFLHALLGAIVAAVLFEAGKKGFAFYVTQFPSYEAIY 245
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA + V++Y+ + +LGAE+ A++ Y
Sbjct: 246 GALAVVPILFVWVYLSWMIVLLGAEITAALPEY 278
>gi|254245626|ref|ZP_04938947.1| Ribonuclease BN [Burkholderia cenocepacia PC184]
gi|124870402|gb|EAY62118.1| Ribonuclease BN [Burkholderia cenocepacia PC184]
Length = 453
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + LL++ P + L ++
Sbjct: 19 LVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQ 78
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 79 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 138
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 139 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWLLALASLP 198
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 199 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 254
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 255 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 287
>gi|330816655|ref|YP_004360360.1| YihY family protein [Burkholderia gladioli BSR3]
gi|327369048|gb|AEA60404.1| YihY family protein [Burkholderia gladioli BSR3]
Length = 437
Score = 145 bits (367), Expect = 5e-33, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 101/273 (36%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L+V P + L F ++
Sbjct: 8 LVTIRRLARFAAKRGAEDRIPQVAGSLTFTTILAVVPLVTVAFALFTAFPMFSSFQSSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L + AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQINNQIFKYLNQFSAKAKGLTTAGLIVLVVTSVMTMMTIESAFNVIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + ++ LA + I + + + A ++ ++ +
Sbjct: 128 KSRPFAQRVLAYWAFITLAPLLFGISLSISSYLFTKSLAIAGAPGATTSVEWLLTAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP G I I++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAAVGGICAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + + GA + +++ +
Sbjct: 244 AFAAVPLFLLWMYLSWLITLAGAMVASALPVIR 276
>gi|255527896|ref|ZP_05394741.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|296184663|ref|ZP_06853074.1| YihY family protein [Clostridium carboxidivorans P7]
gi|255508423|gb|EET84818.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|296050445|gb|EFG89868.1| YihY family protein [Clostridium carboxidivorans P7]
Length = 282
Score = 145 bits (367), Expect = 6e-33, Method: Composition-based stats.
Identities = 52/269 (19%), Positives = 120/269 (44%), Gaps = 2/269 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + + F E+D +++S ++ S + + FPF++F + G+ + V+ + P
Sbjct: 9 IKNLMFRFNEDDVLSLSSQLAYSLIFAFFPFLIFLMTVLGYSSINS--QDVLAGLNRIIP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I + I++V+ L + S + + +S+G + LN+AY +E RS+
Sbjct: 67 RSALELIKNTIIEVVDYKNPHLMSFSLIFTIWSASSGFNGVIKGLNKAYDELEHRSFLKV 126
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ I+ + + + M F+ V + + ++ R ++
Sbjct: 127 QFIAVLCTIGLVIAIFTMIFLLVFGQIIGNSLALNLGFSEEFKIMWHIVRYIIIIVLTIF 186
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ + P + + G IF I ++ ++ F Y+ F YS +Y + +++
Sbjct: 187 ILAALYHYTPCRRLTWREVSSGAIFATIGLILVSIGFAFYVNNFGNYSKIYGSIGAVIIL 246
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
L +L+++ + ++G ELNA++ K+
Sbjct: 247 LTWLFLVSITVVMGGELNATLAFDREGKE 275
>gi|116689478|ref|YP_835101.1| putative ribonuclease BN [Burkholderia cenocepacia HI2424]
gi|116647567|gb|ABK08208.1| tRNA-processing RNAse BN [Burkholderia cenocepacia HI2424]
Length = 442
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + LL++ P + L ++
Sbjct: 8 LVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWLLALASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|241889551|ref|ZP_04776849.1| ribonuclease BN [Gemella haemolysans ATCC 10379]
gi|241863173|gb|EER67557.1| ribonuclease BN [Gemella haemolysans ATCC 10379]
Length = 300
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + + ++ +++++S +LS+FP ++ L + Q +++ +
Sbjct: 21 IKKFVKEMYYRLMYDEISLLSANLSYYFILSLFPMLIVALALTPYFKIDQ--QFLLEKIQ 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + D I +VL + T+ + + +S+G+ + I+ N A+RV + R
Sbjct: 79 NYAPGDLGNYLFDMISEVLNNKNNTIITVGIVFTLWSASSGIYGIIIAFNNAFRVRDGRI 138
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W +T++IS L V + + + V + F + +L
Sbjct: 139 WIVTKIISVILTALFLVGMFLALALIVFGKQLTYILFHKFNLDQGFYNLWSVINYTLPLL 198
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F +F++ P K K +SILPG +F +SW + + LF +YI FS+Y Y + +
Sbjct: 199 FIFFVFVFLYTMGPNLKLKAISILPGALFATLSWTIVSRLFGYYIDHFSSYIKTYGTIGA 258
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M +++LY+ G I+GAE+NA Y +
Sbjct: 259 FMAFILWLYITGYILIIGAEINAIFHNYKVEHR 291
>gi|146283159|ref|YP_001173312.1| ribonuclease [Pseudomonas stutzeri A1501]
gi|145571364|gb|ABP80470.1| probable ribonuclease [Pseudomonas stutzeri A1501]
Length = 391
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 95/264 (35%), Gaps = 9/264 (3%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWPEVIAKPI 78
+ + G A+ ++ + L +V P + + + A + V + +F + I
Sbjct: 1 MADQGPQSAAALTYTTLFAVVPMMTVTFAMLSAIPAFKGVGEQIQFYIFNNFIPSTGATI 60
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ +L + + L + + + + N +RV + R + L+ +
Sbjct: 61 QEYLLAFTSQARQ-LTWFGVGFLMATALMMLLTIEKAFNTIWRVRQPRRGVSSFLLYWAI 119
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ L + L I + + +L ++
Sbjct: 120 LSLGPLLLGAGFATSTYIASLSLISGPYALIG------VGTLIKVMPLLLSVAAFTLIYA 173
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+P + + L G +FT + + +F Y+ F +Y +Y A++ L+++Y+
Sbjct: 174 AVPNTRVPLRHALVGGVFTAVLFEAAKQMFGVYVSYFPSYQLIYGAFAAVPLFLLWIYLS 233
Query: 259 GVFFILGAELNASM-IIYYWRKKP 281
+ + GAEL + WR++P
Sbjct: 234 WMIVLFGAELVCGLSSSQQWRRRP 257
>gi|125974669|ref|YP_001038579.1| putative ribonuclease BN [Clostridium thermocellum ATCC 27405]
gi|256004132|ref|ZP_05429116.1| ribonuclease BN [Clostridium thermocellum DSM 2360]
gi|281418859|ref|ZP_06249878.1| ribonuclease BN [Clostridium thermocellum JW20]
gi|125714894|gb|ABN53386.1| putative ribonuclease BN [Clostridium thermocellum ATCC 27405]
gi|255991880|gb|EEU01978.1| ribonuclease BN [Clostridium thermocellum DSM 2360]
gi|281407943|gb|EFB38202.1| ribonuclease BN [Clostridium thermocellum JW20]
gi|316941794|gb|ADU75828.1| ribonuclease BN [Clostridium thermocellum DSM 1313]
Length = 276
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 66/272 (24%), Positives = 132/272 (48%), Gaps = 2/272 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ +II D ++D A+A+ ++ +L++FPF++F L + ++
Sbjct: 7 LKLIEIIKDIYTRSRDDDVPALAAQLTYYFILALFPFLIFLITLLSYTPI--TGEEAMNF 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + D + ++ A P + + +AA + SSNG++A+ +N+AY E
Sbjct: 65 FARILPPLAFNAVLDVVNEITASPRETFLSFGMIAALWASSNGMKAVIRGINKAYDQKET 124
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +++ RLIS V++ + T++ + + A + F + R
Sbjct: 125 RPFWMVRLISLVAVIILAFTVIFSLALLLFGETAEKELFYHFRFPNIYRGVCTTVRFLLP 184
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ +F I +++ P+ + + +LPG F+ +SW++ LF+ YI F+ +S MY +
Sbjct: 185 VILMFCVFILLYMLTPSRRLSLKEVLPGSAFSALSWILVTTLFSLYINNFADFSKMYGSI 244
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
I+ LV+LY + + +LG ELNAS+
Sbjct: 245 GGIIALLVWLYWISIIIMLGGELNASLAQKKE 276
>gi|311746051|ref|ZP_07719836.1| putative ribonuclease BN [Algoriphagus sp. PR1]
gi|126576268|gb|EAZ80546.1| putative ribonuclease BN [Algoriphagus sp. PR1]
Length = 327
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 55/279 (19%), Positives = 126/279 (45%), Gaps = 4/279 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV---PTV 62
V+D+ I+ ++D A ++ S L++FP I+F N+ +L + +
Sbjct: 30 KNVYDVGRIFIQQLQKDDIVERAGSVAFSFTLALFPLILFLLNIIPYLQDFIPIVTTQNI 89
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I+ +++ P + L ++ A + S+ GV ++ S N Y+
Sbjct: 90 LTFIQEMLPGELYAQAETTIMDIVSRPRQSLISLGFFFALFSSTQGVVSMMNSFNSVYQT 149
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R ++ TR I+ V + +T+ S V + + + + + + ++ +++
Sbjct: 150 KENRGFFQTRAIAASIVFILVLTIFAASAVMIIGGVIIRRLDELQLFNSDFMIFLFSTLK 209
Query: 183 YATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +L +F I F+ F PA K G + +G FT Y+ F++Y+ +
Sbjct: 210 FMVLLFMFYITTAFIFRFAPAVHDKWRFFSTGARLGGLLITLGFYGFTFYLNNFASYNKL 269
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + +++ +++L + + ++ E+N S+ + KK
Sbjct: 270 YGSIGTLIALMLWLLITSLIVLVCFEVNVSLDLVEEDKK 308
>gi|154252348|ref|YP_001413172.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
gi|154156298|gb|ABS63515.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
Length = 322
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
D+ E+ +A+ +S LL++FP + ++ GF+ + + I +
Sbjct: 27 WRDVALRVWAKINEDSVMLVAAGVSFYILLALFPALAAFVSIYGFVADPKTIADHIAFLG 86
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVE 124
G P + I ++ +L L L A + ++N V+AL ++N AY E
Sbjct: 87 GFLPTDGLELIRAQLDGLLRQKPNSLGLGFLLGLGVALWSANNSVKALFEAMNVAYEEEE 146
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ L+SF + L A V+ +P ALA +R +I GR
Sbjct: 147 KRSFVKRHLVSFSFTLGAIAIGVLFLLTVGIVPAALAVLR----IESWAETLIRLGRWPV 202
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++A+ I + ++ + P+ +K+ + G + W+ +V F++Y+ F+ Y+ Y
Sbjct: 203 MLIAVGIAISLIYRYGPSREHAKLRWLSWGAALATLVWIAASVGFSYYLENFANYNATYG 262
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ +++ ++ + ++GAE+NA M R
Sbjct: 263 ALGAVIGLMMWTWISVMIILIGAEINAEMEHQTAR 297
>gi|88812085|ref|ZP_01127337.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88790589|gb|EAR21704.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 331
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 110/275 (40%), Gaps = 8/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
DI + + +A+ ++ ALLS+FP +V +L G + V
Sbjct: 28 LNGWRDIALRLKDDITNHNISIIAAGVAFYALLSIFPALVAIVSLYGLVANPADVQQQFT 87
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYR 121
G PE I+ ++ ++ A + L A + ++ G +A ++LN Y
Sbjct: 88 HYGGILPEEAQLLISQQLQRITASATSAMSAGVISGVLFAVWSATRGTKAFMLALNIVYN 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R + I+ + +V+ + V +P+ L+ + G L ++
Sbjct: 148 EKEKRGFLQFNKIALMITFGMIMLVVLALGLIVTLPILLSILN----LPGALSTVLSFFP 203
Query: 182 IYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L + + P+ + + + G I + WV+ ++LF+ Y+ F Y+
Sbjct: 204 WLLLSGCFVFWLAMLFRYGPSRSEPQWNWVSVGSIAATVLWVITSMLFSFYVGNFGKYAN 263
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y + +I+ L++ Y+ + GAELNA M
Sbjct: 264 TYGSVGAIIILLLWFYLTAFVILFGAELNAQMEHQ 298
>gi|78066072|ref|YP_368841.1| ribonuclease BN [Burkholderia sp. 383]
gi|77966817|gb|ABB08197.1| tRNA-processing RNAse BN [Burkholderia sp. 383]
Length = 443
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAAPSTSIVEWLLALVSLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|91794795|ref|YP_564446.1| ribonuclease BN [Shewanella denitrificans OS217]
gi|123356418|sp|Q12IK3|Y3448_SHEDO RecName: Full=UPF0761 membrane protein Sden_3448
gi|91716797|gb|ABE56723.1| tRNA-processing RNAse BN [Shewanella denitrificans OS217]
Length = 313
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 106/274 (38%), Gaps = 6/274 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ V+ I +++ A H++ LLS+ P I ++ + +
Sbjct: 11 RYFYISVWRFILHLKARLIDDQINIRAGHLAYVTLLSLVPMIAVTMSMLSAFPVFKGIRV 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I+ + ++ A + A + +A + + A+ +LN +R
Sbjct: 71 NIESLVYSYFLPAAGDSAQVYINEFVNNASKGTFVGIIALLVVAILLISAIDKALNNIWR 130
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS ++ + + + L V + + + + L L+
Sbjct: 131 TTEKRSLVVSFSMYWMVLTLGPVLMGSSLVATSYVVSLELFSQSELSGLLPWLV------ 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
ML ++ +++ +P K + L G + + + G F +Y+ F +Y +
Sbjct: 185 ERLPMLFSVASILLLYMVVPTQKVRFFHALLGAVVAALLFEAGKRAFAYYVTQFPSYEAI 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA+I V++Y+ + ++GAE+ A++ Y
Sbjct: 245 YGALATIPILFVWVYLSWMIVLVGAEITAALPEY 278
>gi|81429127|ref|YP_396128.1| putative ribonuclease [Lactobacillus sakei subsp. sakei 23K]
gi|78610770|emb|CAI55821.1| Putative ribonuclease [Lactobacillus sakei subsp. sakei 23K]
Length = 312
Score = 145 bits (366), Expect = 6e-33, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 128/268 (47%), Gaps = 2/268 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ I I E + A I+ ALLS FP ++ N+ + V +V D V
Sbjct: 21 KLIAFIKLMIRRSSEANISDNAKIIAYYALLSFFPLLIVIGNILPYFQLD--VLSVADYV 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P I I + +L GL ++ L + +S G+ AL+IS+NRAYRV ++
Sbjct: 79 KSAVPPTIFNRIMPILQSLLNKRNSGLLSVGILGTLWAASKGINALKISINRAYRVDKIH 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ + RLIS G L+ + LV + VF L ++ F + + + + T
Sbjct: 139 NFILKRLISLGTTLVLLLLLVSLIVVFTFGQQFLEFITPIFKIPEDYINVFGQLKWPITS 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ LF+ LIFV+ F+P K ++ S+LPG T + W++ A F+ Y+ F T Y +
Sbjct: 199 IVLFVILIFVYFFVPNVKMQLRSVLPGAFLTTVGWLILAQAFSLYMRYFGTSWNSYGTIG 258
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
+ + L++L + + GA +N ++
Sbjct: 259 AFIILLLWLNYSAMVLMFGAVVNVAIEE 286
>gi|197116978|ref|YP_002137405.1| membrane-bound transcriptional regulator/ribonuclease BN-like
protein [Geobacter bemidjiensis Bem]
gi|197086338|gb|ACH37609.1| membrane-bound transcriptional regulator, ribonuclease BN-related
protein [Geobacter bemidjiensis Bem]
Length = 446
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 104/270 (38%), Gaps = 5/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + +F+ + A+ +S + +LS+ P + ++ LGA
Sbjct: 27 KGRMVRLLQFLSFTFSNFMANNSLLRATALSFTTVLSLVPLLALAFSVLKGLGAQN---R 83
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + + + + + I A + + + + ++ + N +
Sbjct: 84 LAPLILKEVTAGSEEVVNRVVSYIGNTNMGSVGAIGLAALLFTAISMLGSIEEAFNVVWG 143
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS Y ++ A + L+ + + + ++ + L +
Sbjct: 144 VQETRSLYRKFSDYLSVLISAPLLLLAATSITTTLQS--KWLIGWLMERTYLGDLFLFML 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L++++ + ++ F+P + + S L G + W + H+ V Y+ +
Sbjct: 202 GLTPYLSVWVAIFLLYTFIPNTRVRYTSALIGAVLAGTLWQFAQWAYIHFQVGAGNYNAI 261
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y LA++ +V++Y+ + + G E+ A+
Sbjct: 262 YGTLAALPILMVWIYVSWIIVLFGMEVVAA 291
>gi|329767146|ref|ZP_08258674.1| hypothetical protein HMPREF0428_00371 [Gemella haemolysans M341]
gi|328837871|gb|EGF87496.1| hypothetical protein HMPREF0428_00371 [Gemella haemolysans M341]
Length = 300
Score = 145 bits (366), Expect = 7e-33, Method: Composition-based stats.
Identities = 65/273 (23%), Positives = 127/273 (46%), Gaps = 2/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + + ++ +++++S +LS+FP ++ L + Q +++ +
Sbjct: 21 IKKFVKEMYYRLMYDEISLLSANLSYYFILSLFPMLIVALALTPYFKIDQ--QFLLERIQ 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + D I +VL + T+ + + +S+G+ + I+ N A+RV + R
Sbjct: 79 NFAPGDLGNYLFDMISEVLNNKNNTIITVGIVFTLWSASSGIYGIIIAFNNAFRVRDGRI 138
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W +T+LIS L V + ++ + V + F + +L
Sbjct: 139 WIVTKLISVVITALFLVGMFVVLALVVFGKQLTYLLFHKFNLDEGFYNLWSVLNYSFPIL 198
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
FI +F+++ P K K +SILPG IF +SW + + LF +YI FS+Y Y + +
Sbjct: 199 FTFIVFVFLYIMGPNLKLKAISILPGSIFATVSWTLISRLFGYYIDHFSSYIKTYGTIGA 258
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M +++LY+ G I+GAE+NA Y +
Sbjct: 259 FMAFIIWLYITGYILIIGAEINAIFHNYRVEHR 291
>gi|107022529|ref|YP_620856.1| ribonuclease BN [Burkholderia cenocepacia AU 1054]
gi|105892718|gb|ABF75883.1| tRNA-processing RNAse BN [Burkholderia cenocepacia AU 1054]
Length = 442
Score = 145 bits (365), Expect = 7e-33, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + LL++ P + L ++
Sbjct: 8 LVTIKRLAQFAARRSAEDRIPQVAGSLTFTTLLALVPLLTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASRAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAGPSTSMVEWLLALASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|237746063|ref|ZP_04576543.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
HOxBLS]
gi|229377414|gb|EEO27505.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
HOxBLS]
Length = 433
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 110/271 (40%), Gaps = 9/271 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFG 68
I+ E E + +A +IS + +LS+ P + + + + G
Sbjct: 29 ILRYCGERLKENNLTDVAGNISFTVILSLVPMLAIVLAVFTTFPEFGTLQDTLETYFAQG 88
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ IA+ I + + + + A + + LA + + + + + + +R + ++ R
Sbjct: 89 MIPDNIARTILNYLGEFASNAAN-VSIVGGLALLFTTLSTISTIESAFDRIWHIMNPRPL 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ +LA V L I ++ + L+ + + P L + +
Sbjct: 148 WKRVILYIAIAVLAPVLLGISIYLTSHLVLSEHGLIGWLPFLNGVSAPLIAIIW------ 201
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I ++ LP G +F+ +S+ + LF +IV FS+Y +Y LA+
Sbjct: 202 TAIAFTLLYRILPNRLVLWKDAAAGGLFSAVSFEIAIRLFAFFIVNFSSYERIYGALAAF 261
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY+ + +LGA + A + +
Sbjct: 262 PIFMMWLYISSLIMLLGAMVAALLPEIRNGR 292
>gi|229543009|ref|ZP_04432069.1| ribonuclease BN [Bacillus coagulans 36D1]
gi|229327429|gb|EEN93104.1| ribonuclease BN [Bacillus coagulans 36D1]
Length = 280
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 2/266 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I +E+ D MA+ +S LLS+FP ++F L +L V+++V P
Sbjct: 15 IAALVENSKRNDITGMAAQLSYFFLLSLFPLLIFLFTLLPYLPIKS--DDVLNMVRHFAP 72
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
K I + +VL GL + +A + +SNG+ A+ +LNRAY+V E R +
Sbjct: 73 SQSFKLIETTLKEVLTNRHGGLLSFGMIATLWSASNGMNAVIKALNRAYKVEESRPPVMQ 132
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL+S L + + + + V + YV +F +L +I R T + LFI
Sbjct: 133 RLMSVMLTLGMIIVFIAVILIPVFGEQLIHYVFSYFGLPNDLKNMINILRWVLTPVLLFI 192
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ F P K ++++PG IF + W+V ++ + Y+ F Y+ Y L ++
Sbjct: 193 VFALLYFFAPNEKFGCLTVVPGAIFATVGWIVASLALSFYVSHFGNYNATYGSLGGMIIM 252
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G+ I G ELNA + +
Sbjct: 253 MLWFYISGIILIFGGELNAVLNDKHK 278
>gi|312795954|ref|YP_004028876.1| ribonuclease BN [Burkholderia rhizoxinica HKI 454]
gi|312167729|emb|CBW74732.1| Ribonuclease BN (EC 3.1.-.-) [Burkholderia rhizoxinica HKI 454]
Length = 469
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 43/287 (14%), Positives = 96/287 (33%), Gaps = 12/287 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + E+ +A ++ + +LS+ P + L F ++
Sbjct: 28 LDALKRLARFVATRSAEDRIPQVAGSLTFTTVLSLVPLVTVAFALFTAFPIFASFQQSLQ 87
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T+ + S + + + N +RV
Sbjct: 88 GFLADHLMPAQINSQIFKYLNQFAEKAKGLTTVGMITLVVTSVMTMMIVESAFNTIWRVR 147
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAI-----------PLALAYVRKFFPALGN 172
+ R L+ + + L + + + V + +A A A
Sbjct: 148 KSRPLAQRILVYWAVITLGPLLIGVSLSVSSYLLTHSMLASTVANVAGAASAASGAASRA 207
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ A + + +++LP + L G + I++ + F YI
Sbjct: 208 MPAFAEWALTGAVLTLSVLAFTLSYVYLPNCRVAWRDALVGGLCAAIAFELAKRGFGLYI 267
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
TY+ +Y A+I L+++Y+ + + GA + +++
Sbjct: 268 RRIPTYTAVYGAFATIPIFLLWVYLSWLITLFGAMVTSALPEIRLGH 314
>gi|218130143|ref|ZP_03458947.1| hypothetical protein BACEGG_01730 [Bacteroides eggerthii DSM 20697]
gi|217987647|gb|EEC53975.1| hypothetical protein BACEGG_01730 [Bacteroides eggerthii DSM 20697]
Length = 439
Score = 145 bits (365), Expect = 8e-33, Method: Composition-based stats.
Identities = 51/273 (18%), Positives = 98/273 (35%), Gaps = 4/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + I
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMESQIV 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
FG E + + I + + N + + I+ NR ++V +
Sbjct: 91 KGFGGPSETTEVIFQFVNSYLSQTKSGIFIGIGLIMLLWTVLNLINNMEITFNRIWQVKK 150
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS Y F +LL + LV+ + + + L V L I
Sbjct: 151 ARSMYRKITDYFSMLLLIPLLLVVSGGLSIFMSTMLKNVAD----FTLLAPIGKFLIRLI 206
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + +++F+P K K+ L + T + L+ + S Y+ +Y
Sbjct: 207 PFVLTWFMFTGLYVFMPNTKVKLKHALISGVLTGTAHQAFQFLYISSQLWVSRYNAIYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L++L + + GAEL +
Sbjct: 267 FAALPMFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|317476636|ref|ZP_07935881.1| YihY family protein [Bacteroides eggerthii 1_2_48FAA]
gi|316907232|gb|EFV28941.1| YihY family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 439
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 97/273 (35%), Gaps = 4/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ IY I F ++ AS ++ S LL++ P + +A G + + I
Sbjct: 31 LYNIIKTIYLCINRFTKDRLVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMESQIV 90
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
FG E + + I + + N + + I+ NR ++V +
Sbjct: 91 KGFGGPSETTEVIFQFVNSYLSQTKSGIFIGIGLIMLLWTVLNLINNMEITFNRIWQVKK 150
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS Y F +LL + LV+ + + + L V L I
Sbjct: 151 ARSMYRKITDYFSMLLLIPLLLVVSGGLSIFMSTMLKNVAD----FTLLAPIGKFLIRLI 206
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + +++F+P K K+ L + + L+ + S Y+ +Y
Sbjct: 207 PFVLTWFMFTGLYVFMPNTKVKLKHALISGVLAGTAHQAFQFLYISSQLWVSRYNAIYGS 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L++L + + GAEL +
Sbjct: 267 FAALPMFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|307303467|ref|ZP_07583221.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
gi|306902858|gb|EFN33450.1| ribonuclease BN [Sinorhizobium meliloti BL225C]
Length = 330
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + EE +A+ +S LLS+FP + ++ G + + T + ++
Sbjct: 36 DVFWRVFSEIGEERVMLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIGTHVGILQAL 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P I D++ + L + + + ++NG+ A ++N AY E R
Sbjct: 96 LPADSYGLIMDQLETLTTQKPSTLGIGFFVSLSISLWLAANGIAATFDAMNVAYGEREKR 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L+ + A + V + +P LAYV + L+ R A +
Sbjct: 156 GFLSRTLLCLAFTFAALLFAVALIAAIGVVPAVLAYV----WVDRWVELVTRAARWPAVL 211
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + G I ++ F P+ ++K+ + G +F+ + W+ + LF++Y+ F+ Y+ Y L
Sbjct: 212 LLVTFGTILIYRFGPSRERAKLRWLNWGAVFSTLFWLAASWLFSYYLEHFANYNATYGAL 271
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
++ + ++++ + I+GA +NA +
Sbjct: 272 GALAGLMTWVWISVMILIIGALINAELEHQ 301
>gi|254502756|ref|ZP_05114907.1| YihY family protein [Labrenzia alexandrii DFL-11]
gi|222438827|gb|EEE45506.1| YihY family protein [Labrenzia alexandrii DFL-11]
Length = 294
Score = 145 bits (365), Expect = 9e-33, Method: Composition-based stats.
Identities = 118/273 (43%), Positives = 163/273 (59%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ ++ DAI HF +DG+AMASH++LS LL++FP ++F A+LAGF G TV
Sbjct: 9 FAKASLAVLKDAIGHFSRDDGFAMASHVALSGLLAIFPLLIFIASLAGFFGMVGAADTVS 68
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++VF AWP+ +A P+ EI VL VP L T A+AA +F+SNGVEALR +LNRAYR +
Sbjct: 69 ELVFDAWPKTVAAPVVREIENVLTVPRSDLLTFGAVAALWFASNGVEALRTALNRAYRQI 128
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS+ + R+ S V+L +V L+ +F+ V PL + +R F P + LL I R
Sbjct: 129 EKRSFILLRIQSLALVILGAVILLAYTFLVVLAPLGIEALRGFVPQVEPFLLSINIARYT 188
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L +GL H LP+ K I PGVI T + W+V F Y+ F+ Y + Y
Sbjct: 189 LAGSLLIVGLFMTHWLLPSGKRSFSDIWPGVIATLLLWIVSGSAFGAYLARFANYVSTYG 248
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
GLA IMT L+FLY+ + FILG ELNA++
Sbjct: 249 GLAGIMTALIFLYICSLAFILGGELNAAIARQR 281
>gi|152987671|ref|YP_001349907.1| ribonuclease [Pseudomonas aeruginosa PA7]
gi|166918690|sp|A6VA22|Y4558_PSEA7 RecName: Full=UPF0761 membrane protein PSPA7_4558
gi|150962829|gb|ABR84854.1| probable ribonuclease [Pseudomonas aeruginosa PA7]
Length = 411
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MRE+F + FV + A+ ++ + L +V P + ++ + A +
Sbjct: 1 MREHFNDGIEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 61 T-VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + A+ L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSF-TTQARHLTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R L+ + + L + L V I + L
Sbjct: 120 WRVRQPRRGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLS------LLHGPDALPGAET 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 174 LLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGMFTAVLFEAAKTLFGLYVSLFPGYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 234 LIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|134295525|ref|YP_001119260.1| putative ribonuclease BN [Burkholderia vietnamiensis G4]
gi|134138682|gb|ABO54425.1| tRNA-processing RNAse BN [Burkholderia vietnamiensis G4]
Length = 443
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTLKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNVQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLAFTGAAPSTSIIEWLLALASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 276
>gi|329960789|ref|ZP_08299095.1| YihY family protein [Bacteroides fluxus YIT 12057]
gi|328532390|gb|EGF59191.1| YihY family protein [Bacteroides fluxus YIT 12057]
Length = 439
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 96/270 (35%), Gaps = 4/270 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ IY I F ++ AS ++ S LL++ P + +A G + I F
Sbjct: 34 IIKTIYLCINRFTKDRIVNKASALTYSTLLAIVPILAIVFAIARGFGFDNLMENQIISGF 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G E + + + + + + N + + I+ NR ++V + RS
Sbjct: 94 GGPTETTTVILQFVNSYLSQTKSGIFIGVGLVMLLWSVLNLINNMEITFNRIWQVKKARS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
Y F +LL + LV+ + + + L V L I
Sbjct: 154 MYRKITDYFSMLLLIPILLVLSGGISIFMSTMLKNVED----FTLLAPIGKFLVRLIPFA 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ +++F+P K K+ L I + L+ + S Y+ +Y A+
Sbjct: 210 LTWFMFTGLYVFMPNTKVKLKHALISGILAGTAHQAFQFLYISSQLWVSRYNAIYGSFAA 269
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++L + + GAEL +
Sbjct: 270 LPMFLLWLQISWTICLFGAELTYAGQNIRN 299
>gi|212633182|ref|YP_002309707.1| ribonuclease BN [Shewanella piezotolerans WP3]
gi|212554666|gb|ACJ27120.1| Ribonuclease BN [Shewanella piezotolerans WP3]
Length = 308
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 103/276 (37%), Gaps = 8/276 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
++ + F E+ A H++ LLS+ P + ++ + +
Sbjct: 2 WSIWAFFLHLLRRFKEDQVNIKAGHLAYVTLLSLVPIVAVMFSMLSAFPVFAGIRGQLEG 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
V+ + + I + +A +KG T+ A + + A+ SLN +R E
Sbjct: 62 FVYDNFLPAAGDTVQIYINEFVANASKG-TTVGIAALVVVALMLISAIDKSLNSIWRTKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ + + + L V + + L ++
Sbjct: 121 KRQVAVSFSMYWMVLTLGPVLVGASLVATSYLVSL------KLFNDSELSGVVPLIIERL 174
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
M+ + +++ +P K K L G I + + +G F Y+ F +Y +Y
Sbjct: 175 PMMFSVAAFLLLYMVVPNKKVKFFHALLGAIVAAMLFELGKKGFAFYVTQFPSYEAIYGA 234
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I V++Y+ + ++GAE+ A+M Y ++
Sbjct: 235 LAVIPILFVWVYVSWIIVLVGAEITAAMPEYLRERQ 270
>gi|269929219|ref|YP_003321540.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
gi|269788576|gb|ACZ40718.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
Length = 369
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 120/282 (42%), Gaps = 4/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---Q 57
M+ + + + F ++D MA+ + + S+ P ++F A L+G + +
Sbjct: 1 MQLREVDFKAVGKEVVREFSDDDVTGMAAQAAYQIIFSLPPLLIFFAALSGLVARYTGVD 60
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
++ + P + + + + + GL + L A + +S + + N
Sbjct: 61 VFGQLLSLAEEGLPASVFDTVEIILGGIQEQSSAGLLSFGFLLAIWSASGALNTMISLFN 120
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
RAY V + R + RL++ G + +V ++ +FV ++ +F L+
Sbjct: 121 RAYDVDDTRGFIKKRLLAIGLTIGLAVLVIGAFVLFVFGQRIGLWIAEFAGLGEAFTLVW 180
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
R A ++ + + L ++ PA + I PG +F + W++ F+ Y+ FS
Sbjct: 181 NIVRWPAIVIFMMLALAILYWAGPAIEQTFRWISPGAVFATLLWLLATFGFSLYL-RFSN 239
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y L ++ L FLY+ + +LG E+NA + Y K
Sbjct: 240 PGSAYGILGGLVVLLFFLYLSSIVLLLGCEVNAVIDKRYDPK 281
>gi|206559830|ref|YP_002230594.1| putative tRNA processing exoribonuclease [Burkholderia cenocepacia
J2315]
gi|198035871|emb|CAR51762.1| putative tRNA processing exoribonuclease [Burkholderia cenocepacia
J2315]
Length = 439
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 5 LDTIKRLAQFAARRSAEDRIPQVAGSLTFTTMLAIVPLVTVAFALFTAFPMFASFQISLQ 64
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 65 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 124
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 125 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAGPSTSIVEWLLALASLP 184
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 185 LTVL----AFTLLYVYLPNCAVAWRDAVIGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 241 AFAALPVFLLWVYLSWFIALLGAMVASALPAIR 273
>gi|315193410|gb|EFU23807.1| hypothetical protein CGSSa00_04751 [Staphylococcus aureus subsp.
aureus CGS00]
Length = 380
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 3/270 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + I ++D +A+ ++ +L+ L L + I +
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLA---MFPMLLFLLTLLPFFNIKQSQITNMLSN 128
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I I + + GL +I + A + +SNG+ A+ S N AY V + R+
Sbjct: 129 APAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDSRNGI 188
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L+S + ++ V V+ + + ++ + I RI ++ +
Sbjct: 189 VLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLPIIII 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +A I+
Sbjct: 249 FIVFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSIAGII 308
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GAE+NA + K
Sbjct: 309 ILLLWLYITSFIIIVGAEINAIIHQRSVIK 338
>gi|254520560|ref|ZP_05132616.1| YihY family protein [Clostridium sp. 7_2_43FAA]
gi|226914309|gb|EEH99510.1| YihY family protein [Clostridium sp. 7_2_43FAA]
Length = 280
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/275 (22%), Positives = 130/275 (47%), Gaps = 2/275 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+E V D I I +D +A+ + ++ +L+ FPF++F L GF +
Sbjct: 6 KENKRSVIDSIIYFIVKINNDDIFALGAQLAYYLILAFFPFLIFLLTLIGFSRLNSA--D 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++D + P + + +++++ GL S + + + +S+G A+ +N+AY
Sbjct: 64 ILDGLRTILPNNVFTLVDTTVVEIVDTQNAGLLGASIVLSMWSASSGFRAVIKGVNKAYD 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ E RS+ I+ + L ++ +++ + V + Y+ FP L I R
Sbjct: 124 IREHRSFIKRAFIAIFFTLALALIIMLTLAMLVFGEIIGKYLISVFPFQNILRNIWNISR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+LA+ ++ + PA K + PG I + + W+V ++ F++YI + YS +
Sbjct: 184 YIVVILAMIWIFACIYRYTPARKIPWKEVFPGAIVSTLGWIVVSLAFSYYINNIANYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y + ++ + +LY+ + ILGAE+N+ + I
Sbjct: 244 YGSVGAVFILMTWLYITSMILILGAEINSVLSIRK 278
>gi|83591770|ref|YP_425522.1| ribonuclease BN [Rhodospirillum rubrum ATCC 11170]
gi|83574684|gb|ABC21235.1| Ribonuclease BN [Rhodospirillum rubrum ATCC 11170]
Length = 313
Score = 144 bits (364), Expect = 1e-32, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 104/275 (37%), Gaps = 8/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F +I + +A+ ++ +LL+ FP +V L G Q I
Sbjct: 28 FSVIRAVSRRSDRDHVGVLAAGVAFFSLLASFPALVTLITLYGLFTGPQEAVRQIAEAGV 87
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + + ++ L S L + + +S G+ A+ ++ AY+V +
Sbjct: 88 YLPRGVHDLLAEHLPRLAQASPGSLGLGAITSLLFSIWSASRGMGAMVDGVDIAYQVGDG 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ G L V I + V +P + P + + R
Sbjct: 148 RGFLRKSILVVGLTLAGLVVSAIALPLIVGLPA----LFDRLPLPLEIRWALALARWPLL 203
Query: 186 MLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L + + P + + PG + W++ + + Y+ S+Y Y
Sbjct: 204 FALVLGALAVLFRYAPDRENPRWRWVTPGALAAATLWILASGGLSLYVGLVSSYDQTYGT 263
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA ++ +++LY+ +LGAE+NA + +
Sbjct: 264 LAGVVVAMMWLYLASYAVLLGAEINAELEDRGMER 298
>gi|150397725|ref|YP_001328192.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150029240|gb|ABR61357.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 290
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 141/276 (51%), Positives = 195/276 (70%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
I++ +++DA+ HF E+DGWAMASH++LS+L++VFPF++FG LA FLGA QF T
Sbjct: 2 PVIRIIWKVVFDALWHFSEDDGWAMASHVALSSLMAVFPFLIFGTALASFLGADQFAETA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ ++F WPE IAKP+ DE+++VL +P L TIS LAAAYF+SNGVEALRI+LNRAYRV
Sbjct: 62 VHLIFDTWPESIAKPVADEVVRVLTIPRGSLLTISVLAAAYFASNGVEALRIALNRAYRV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RSWY+TRL S G+VL A + L +S + VA+PLA+ ++FP L ++ + + +
Sbjct: 122 AESRSWYVTRLSSLGFVLGAVLILAALSLLLVAVPLAVRNADQWFPWLDTVMAAVDDWGL 181
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T+ L GL+ HL+LP+ I+ +LPG+ T + W VG F YI FS+Y+T Y
Sbjct: 182 TLTLAMLTAGLLVAHLWLPSGHRNIVDVLPGIFLTLVLWSVGGYAFASYIANFSSYATTY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
AGLASIM LVFLYMLG FI+GAE+NA+++ Y +
Sbjct: 242 AGLASIMVVLVFLYMLGAIFIIGAEINAAILKYKVK 277
>gi|325529541|gb|EGD06437.1| ribonuclease BN [Burkholderia sp. TJI49]
Length = 438
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTLKRLAQFAARRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFAAKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P+ + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSLSSYLFTQSLAFTGAAPSTSIVEWLLTLASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F +++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVIGGLFAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LGA + +++
Sbjct: 244 AFAALPVFLLWMYLSWFIALLGAMVTSALPAIR 276
>gi|288559252|sp|A1SB50|Y3404_SHEAM RecName: Full=UPF0761 membrane protein Sama_3404
Length = 323
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 103/276 (37%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ +F V+ + + E+ A H++ LLS+ P + ++ Q +
Sbjct: 10 IQSFFLGVWRFVLHLVSRLKEDQINVRAGHLTYVTLLSLVPMVAVTMSVLSAFPVFQGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
T+ V+ + I + + +KG + + + A+ SLN
Sbjct: 70 GTIETFVYENMIPAAGDTVQTYINEFVKNASKG-TAVGIGFLVVVAIMLISAIDKSLNAI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E R + + + + + L V + V + ++ ++
Sbjct: 129 WRTKEKRRFMVAFSMYWMVLTLGPVLMGASIAVTSYLVSLKVLSEA------DVYGVVPM 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ + +++ +P K K + L G + + + G F Y+ TF +Y
Sbjct: 183 LIEKLPLMFSVAAFLLLYMAVPNQKVKFLHALLGALVAALLFEAGKRGFALYVTTFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + G + A++ Y
Sbjct: 243 AIYGTLATIPILFVWVYLSWTIVLFGGVIAAALPEY 278
>gi|254780367|ref|YP_003064780.1| ribonuclease protein [Candidatus Liberibacter asiaticus str. psy62]
gi|254040044|gb|ACT56840.1| ribonuclease protein [Candidatus Liberibacter asiaticus str. psy62]
Length = 281
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP
Sbjct: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY
Sbjct: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG
Sbjct: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST
Sbjct: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP
Sbjct: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
>gi|118593797|ref|ZP_01551163.1| Ribonuclease BN [Stappia aggregata IAM 12614]
gi|118433592|gb|EAV40257.1| Ribonuclease BN [Stappia aggregata IAM 12614]
Length = 296
Score = 144 bits (363), Expect = 1e-32, Method: Composition-based stats.
Identities = 117/276 (42%), Positives = 162/276 (58%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ +++ ++ DAI HF +DG+AMASH++LS LL++FP ++F A+LA FLG T
Sbjct: 4 RQTVLVIYAVLKDAIGHFARDDGFAMASHVALSGLLAIFPLLIFIASLAAFLGMTGAADT 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V +++F AWP +A P+ EI VL + L T A+AA +FSSNGVEALR +LNRAYR
Sbjct: 64 VSELLFDAWPRSVASPVVREIQNVLTIRRGDLVTFGAVAALWFSSNGVEALRTALNRAYR 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS + RL S G VLL + L+ +F+ V PLA+ ++ F P + LL I R
Sbjct: 124 QHETRSIVLLRLQSIGLVLLGASILLAYTFLVVLAPLAIEGLKVFVPQVETFLLSINVAR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L IGL H LPA + PGV T W++ F Y+ +F+ Y +
Sbjct: 184 YTLAGSLLIIGLFITHWLLPAGHRTFRDLWPGVFATLFMWIIAGSAFGAYLASFANYVST 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y GLA IMT L+FLY+ + FILG ELNA++
Sbjct: 244 YGGLAGIMTALIFLYICALVFILGGELNAAISRQRR 279
>gi|148360703|ref|YP_001251910.1| ribonuclease BN [Legionella pneumophila str. Corby]
gi|288559231|sp|A5IGR4|Y2650_LEGPC RecName: Full=UPF0761 membrane protein LPC_2650
gi|148282476|gb|ABQ56564.1| ribonuclease BN [Legionella pneumophila str. Corby]
gi|158512137|gb|ABW69098.1| ribonuclease BN [Legionella pneumophila]
Length = 412
Score = 144 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 112/271 (41%), Gaps = 11/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFG 68
+ I+HF+++D +AS ++ ++LL+V P + G + Q V + +F
Sbjct: 16 RFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAEPVQNFIFD 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ K + + Q + +K L + + + + + ++N+ +RV R
Sbjct: 76 NFVPATGKIVQSYLQQFTSQVSK-LSIWGVVFLIFTALLVMFTIERAMNKIWRVSSSRHG 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L+ + + LA V L + + P + Y+
Sbjct: 135 VSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTILHYSPFFL 185
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
IG F+++ +P KI G + I + F +Y++ ++TY +Y A++
Sbjct: 186 SLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYELLYGAFATV 245
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y + + +LGAE++ + +++ R+
Sbjct: 246 PIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|110632679|ref|YP_672887.1| putative ribonuclease BN [Mesorhizobium sp. BNC1]
gi|110283663|gb|ABG61722.1| putative ribonuclease BN [Chelativorans sp. BNC1]
Length = 322
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 121/273 (44%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + E+ +A+ ++ LL++FP + +L G + V I + G
Sbjct: 28 DIGWRVFREIGEDRITLIAAGVTFYLLLALFPALAAFVSLYGLVSDPVTVADHIAYLGGL 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + ++ +++ ++ L I A + ++NG++AL ++N AY E R
Sbjct: 88 LPPTAIEIVQQQLQALVSERSQSLGLGFLIGLAIALWSANNGIKALFEAMNVAYDETEKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L+S + L V +++ +P LA + +I R +
Sbjct: 148 GFIKLNLLSLSFTLATLVLGIMLIIAVGVVPAVLAIL----GLSPWAETLIAFARWPTLL 203
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L G++ ++ F P+ + K + G + + W+ +V F++Y+ F+ Y Y L
Sbjct: 204 LVSMFGILMLYRFGPSRERPKWRWLSWGAVIATLVWLAASVAFSYYLQNFADYDATYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+I+ +++ ++ V I+GAE++A + R
Sbjct: 264 GAIIGLMMWTWISVVVLIVGAEIDAEIEHQTAR 296
>gi|150376885|ref|YP_001313481.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
gi|150031432|gb|ABR63548.1| putative ribonuclease BN [Sinorhizobium medicae WSM419]
Length = 330
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 53/270 (19%), Positives = 119/270 (44%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ + + EE +A+ +S LLS+FP + ++ G + + T + ++
Sbjct: 36 DVFWRVVSEIAEERVVLIAAGVSFYLLLSLFPALGALVSIYGLVADPSEIGTHMGILQAL 95
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P+ I D++ + L + + + ++NG+ AL ++N AY E R
Sbjct: 96 LPQDSYGLIMDQLKTLTTQKPSTLGMGFFISLSISLWLAANGIAALFDAMNVAYGEREKR 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ ++ + A + V + +P LA + L+ R A +
Sbjct: 156 GFLFRTVLCIAFTFAALLFAVALIVAIGVVPAVLA----HLWVDRWVELVTRVARWPALL 211
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + G + ++ F P+ ++K+ + G +F+ + W + LF++Y+ F+ Y+ Y L
Sbjct: 212 LLVTFGTVLIYRFGPSRERAKLRWLNWGAVFSTLFWFAASWLFSYYLEHFANYNATYGAL 271
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
++ + ++++ + I+GA +NA +
Sbjct: 272 GALAGLMTWVWISVMILIIGALINAELEHQ 301
>gi|313105837|ref|ZP_07792100.1| putative ribonuclease [Pseudomonas aeruginosa 39016]
gi|310878602|gb|EFQ37196.1| putative ribonuclease [Pseudomonas aeruginosa 39016]
Length = 411
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MRE+F + FV + A+ ++ + L +V P + ++ + A +
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 61 T-VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + A+ L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSF-TTQARHLTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R L+ + + L + L V I + L
Sbjct: 120 WRVRQPRRGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLS------LLHGPDALPGAET 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 174 LLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 234 LIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|288559250|sp|A3QIW3|Y3545_SHELP RecName: Full=UPF0761 membrane protein Shew_3545
Length = 305
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 107/280 (38%), Gaps = 8/280 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R ++ + + E+ A H++ LLS+ P + ++ + +
Sbjct: 10 LRSIMLGIWQFMIHLKQRITEDQINMRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ I+ ++ + + I + +A +KG + A + + + SLN
Sbjct: 70 SHIETFIYENFIPSAGDSVQMYINEFVANASKG-TAVGIGALVVVAILLISNIDKSLNGI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E R ++ + + + L V + + + +L ++
Sbjct: 129 WRTTEKRPMVVSFSMYWMVLTLGPVLMGASLVATSYVVSLKLFSG------TDLSGVVPL 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
M + +++ +P K K L G I + + +G F Y+ F Y
Sbjct: 183 LVERLPMFFSVATFLLIYMVVPNTKVKFFHALLGAIVAALLFELGKKGFALYLTEFPAYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LA+I +++Y+ + ++GAE+ A+M Y ++
Sbjct: 243 AIYGALATIPILFMWVYLSWIIVLIGAEITAAMPEYLDKR 282
>gi|239994832|ref|ZP_04715356.1| ribonuclease BN [Alteromonas macleodii ATCC 27126]
Length = 294
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 104/274 (37%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVV 66
V D+ I+ E++ A H++ LLS+ PFI+ + A V + V
Sbjct: 17 VRDLFSIFIKRCREDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRSKLEHFV 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + + + + + ++ + I L+ + + + +LNR +R R
Sbjct: 77 FSNFVPTASDVVHKYMTDFVGNASQ-MSAIGILSLLVVALMLISNVDKTLNRIWRTQSDR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
T I + + L + + V + A+ ++ P LG
Sbjct: 136 PIVYTFAIYWMVITLGPMLIGSSVVVSSYLTGLAAFTEEYTPGLGTF------LLSLVPS 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A + +++ +P + L G I I++ + F Y+ F +Y +Y LA
Sbjct: 190 GAAMLAFTILYMVVPNRRVFARHALVGAIVATIAFEITKSGFALYVTNFPSYELIYGALA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++Y+ + + GAE S+ + +K
Sbjct: 250 VVPILFLWVYLSWIIVLFGAEFTCSLGEAFENRK 283
>gi|300312602|ref|YP_003776694.1| ribonuclease BN transmembrane protein [Herbaspirillum seropedicae
SmR1]
gi|300075387|gb|ADJ64786.1| ribonuclease BN transmembrane protein [Herbaspirillum seropedicae
SmR1]
Length = 470
Score = 144 bits (362), Expect = 2e-32, Method: Composition-based stats.
Identities = 48/272 (17%), Positives = 103/272 (37%), Gaps = 9/272 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVF 67
D++ A E+ +A ++ + +LS+ P + L + V
Sbjct: 21 DLLRFAGRRLREDRLPQVAGSLTFTTILSLVPMLTIALALFTAFPLFSTFRASLEAYFVE 80
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ +A I + Q A + + + + S + + N+ +RV + R
Sbjct: 81 NLMPKGVANTILGYLNQF-AAKSARISAVGGVVLILTSVLTMSTIESVFNQIWRVKKSRP 139
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L+ + + L + + + V + A K P LG + +++
Sbjct: 140 LVQRVLVYWAIITLGPLLIGVSISVTSYLSTATGGAVKSLPWLGASFYTL------VSLM 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ +P L G + I + LF YI+ F TY+ +Y +A
Sbjct: 194 FSTLAYTLLYSTVPNQTVDWRDALAGGLLAGIGLEIAKRLFAVYILKFPTYTMVYGTVAV 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ LV++YM+ + + GA L A++ + + +
Sbjct: 254 LPIFLVWIYMMWMITLFGALLTAALPVVRYER 285
>gi|312886962|ref|ZP_07746566.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
gi|311300274|gb|EFQ77339.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
Length = 329
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 127/267 (47%), Gaps = 1/267 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + +E AS ++ + LL++FP +F L ++ F T+++++
Sbjct: 34 LYTVAIFFFQELKQESLANKASSLAYTFLLAIFPGTIFLFTLIPYIPIKSFQDTLLNIIE 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I ++ GL + L+A +F++NGV L + N++ +VE R+
Sbjct: 94 LILPSNAYAAFESTIEDIVKNQHGGLLSFGFLSAMFFATNGVHKLMRAFNKSSLIVETRT 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGRIYATM 186
W R I+ +L S +L + + +++++ + ++ R +
Sbjct: 154 WLKRRWIALVLTMLISFSLFVAILIMTISQYIISFIQFQLNTGGKFWIYLVMISRWLIVI 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F+ + ++ + PA K + + PG I V+ ++ FT YI FS+Y+ +Y L
Sbjct: 214 VLFFVTVSILYRYGPAHKRRWKFLSPGSILATCLAVLTSLGFTFYINHFSSYNKLYGSLG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
+++ +++LY+ + ++G ELNAS+
Sbjct: 274 TLIVIMLWLYLNSLIILIGFELNASID 300
>gi|119945515|ref|YP_943195.1| putative ribonuclease BN [Psychromonas ingrahamii 37]
gi|119864119|gb|ABM03596.1| putative ribonuclease BN [Psychromonas ingrahamii 37]
Length = 442
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 107/269 (39%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + II AI F E+ AS ++ +LLS+ P +A G + +
Sbjct: 27 MKLFGLRQLRIILLAIRGFAEDKCMLRASALTFFSLLSMVPVAAMAFGIAKGFGFDKKLE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T++ EV+ K I + + I + + + + S N +
Sbjct: 87 TLLFDNLQGQEEVVEKLIGFSQAMLENTQGGIIAGIGTVVLFWAVIKVLGQIEESFNEIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + RS+ +L+ V L+I S V I + + + LG ++ +I
Sbjct: 147 GIKKSRSFARKFSDYVSIMLICPVLLIISSSTTVIISSQVTLLVEKISFLGPIVPLIITS 206
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ F+++F+P K + L G I ++ + ++ + V Y
Sbjct: 207 LKILPYAVIWTVFTFIYIFIPNTKVNFKAGLLGGIIAGTTYQIVQWIYITFQVGVLKYGA 266
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
+Y A++ LV+L M + +LGAE++
Sbjct: 267 IYGSFAALPLFLVWLQMSWLIVLLGAEVS 295
>gi|107100407|ref|ZP_01364325.1| hypothetical protein PaerPA_01001432 [Pseudomonas aeruginosa PACS2]
gi|254239302|ref|ZP_04932625.1| hypothetical protein PACG_05496 [Pseudomonas aeruginosa C3719]
gi|254245235|ref|ZP_04938557.1| hypothetical protein PA2G_06126 [Pseudomonas aeruginosa 2192]
gi|126171233|gb|EAZ56744.1| hypothetical protein PACG_05496 [Pseudomonas aeruginosa C3719]
gi|126198613|gb|EAZ62676.1| hypothetical protein PA2G_06126 [Pseudomonas aeruginosa 2192]
Length = 411
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MRE+F + FV + A+ ++ + L +V P + ++ + A +
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 61 T-VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + A+ L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSF-TTQARHLTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R L+ + + L + L V I + L
Sbjct: 120 WRVRQPRRGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLS------LLHGPDALPGAET 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 174 LLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 234 LIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|296390694|ref|ZP_06880169.1| ribonuclease [Pseudomonas aeruginosa PAb1]
Length = 411
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MRE+F + FV + A+ ++ + L +V P + ++ + A +
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 61 T-VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + A+ L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSF-TTQARHLTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R L+ + + L + L V I + L
Sbjct: 120 WRVRQPRRGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLS------LLHGPDALPGAET 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 174 LLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 234 LIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|15615917|ref|NP_244221.1| hypothetical protein BH3355 [Bacillus halodurans C-125]
gi|10175978|dbj|BAB07074.1| BH3355 [Bacillus halodurans C-125]
Length = 272
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 63/267 (23%), Positives = 117/267 (43%), Gaps = 2/267 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
Y + + ++ ++ +LS+FP I+F L + Q + ++
Sbjct: 6 FFYQFFKQLKTDPIPDWSATLAYYFMLSIFPLIIFILALIPYFSIDQ--QYLYQIIVDYL 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE +A T IL V++ P GL + ALAA + +SNG+ AL ++NR Y V E RS Y
Sbjct: 64 PEDLADVFTSVILDVVSRPQGGLVSFGALAAIWTASNGMNALIRAVNRCYAVEETRSLYN 123
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + V + V L + + F ++ R + +
Sbjct: 124 LRFLSIMLTIGMMLVFVTTLLLPVFGHLIIQLLDWLFIVPEGTASVLNALRWIVGICLMT 183
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I LI ++L P K+ ++ G + I W + + F+ Y+ F +S Y L ++
Sbjct: 184 IILIVIYLLAPNTSLKLKDVVTGAVVATIGWQLISYGFSAYVSNFGNFSATYGSLGGVIV 243
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
+++ ++ + I+G E+NA+
Sbjct: 244 LMLWFFLSSLMLIIGGEVNAATYRLKQ 270
>gi|116048875|ref|YP_792324.1| ribonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|122257982|sp|Q02IB2|Y5196_PSEAB RecName: Full=UPF0761 membrane protein PA14_51960
gi|115584096|gb|ABJ10111.1| probable ribonuclease [Pseudomonas aeruginosa UCBPP-PA14]
Length = 411
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MRE+F + FV + A+ ++ + L +V P + ++ + A +
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 61 T-VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + A+ L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSF-TTQARHLTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R L+ + + L + L V I + L
Sbjct: 120 WRVRQPRRGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLS------LLHGPDALPGAET 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 174 LLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 234 LIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|54296667|ref|YP_123036.1| hypothetical protein lpp0698 [Legionella pneumophila str. Paris]
gi|53750452|emb|CAH11846.1| hypothetical protein lpp0698 [Legionella pneumophila str. Paris]
Length = 412
Score = 143 bits (361), Expect = 3e-32, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 112/271 (41%), Gaps = 11/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFG 68
+ I+HF+++D +AS ++ ++LL+V P + G + Q V + +F
Sbjct: 16 RFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAEPVQNFIFD 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ K + + Q + +K L + + + + + ++N+ +RV R
Sbjct: 76 NFVPATGKIVQSYLQQFTSQVSK-LSIWGIVFLIFTALLVMFTIEQAMNKIWRVSSSRHG 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L+ + + LA V L + + P + Y+
Sbjct: 135 VSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTILHYSPFFL 185
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
IG F+++ +P KI G + I + F +Y++ ++TY +Y A++
Sbjct: 186 SLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYELLYGAFAAV 245
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y + + +LGAE++ + +++ R+
Sbjct: 246 PIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|288559255|sp|Q0VPA7|Y1543_ALCBS RecName: Full=UPF0761 membrane protein ABO_1543
Length = 429
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 100/280 (35%), Gaps = 7/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVP 60
+ F + + F E+ A+ ++ + L ++ P + + + A
Sbjct: 11 QARFNSIKAFFVLLVRQFNEDGCRQSAAALTYTTLFAIVPVMTVSFVVLSSVPALQGKSA 70
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + F + + D + A A L + + S + + +LNR +
Sbjct: 71 QLQEWAFEYFVPSAGNMLLDHLQSF-AKQATNLTVLGIVFLVVTSVLMLSTVEQTLNRIW 129
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V R ++ L+ + + L + L + + + + F + L +
Sbjct: 130 KVQTPRKGLVSLLMYWALLSLGPICLGLGLAITSYLTS-----QAIFSDTVSYLGGVRLW 184
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L L ++ +P + G + + + FT +I +Y
Sbjct: 185 LAVLPFLFTTAMLTLMYTVVPNTTVPFRQGVLGAAMAALLFELAKGAFTFFIKQAPSYQV 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++Y+ + GAEL +++++ ++
Sbjct: 245 VYGAFAAVPVFLLWIYISWTIVLGGAELVRALVVFQEHQR 284
>gi|218893079|ref|YP_002441948.1| putative ribonuclease [Pseudomonas aeruginosa LESB58]
gi|226737450|sp|B7UXY2|Y4364_PSEA8 RecName: Full=UPF0761 membrane protein PLES_43641
gi|218773307|emb|CAW29119.1| probable ribonuclease [Pseudomonas aeruginosa LESB58]
Length = 411
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MRE+F + FV + A+ ++ + L +V P + ++ + A +
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 61 T-VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + A+ L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSF-TTQARHLTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R L+ + + L + L V I + L
Sbjct: 120 WRVRQPRRGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLS------LLHGPDALPGAET 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 174 LLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 234 LIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|84684451|ref|ZP_01012352.1| putative ribonuclease protein [Maritimibacter alkaliphilus
HTCC2654]
gi|84667430|gb|EAQ13899.1| putative ribonuclease protein [Rhodobacterales bacterium HTCC2654]
Length = 316
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 8/273 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
F I+ F E +A+ ++ ALLS+FP I +AG + +
Sbjct: 19 WFAILKRVWTRFNENRLTLIAAGVAFFALLSLFPAITATIAVAGLFFDPAEITDPLQEFA 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVE 124
P+ A I D+ V GL + L Y +S GVE L + LN AY +
Sbjct: 79 AVLPDGAASIILDQATSVTGSDESGLGLAAILGLLLALYSASKGVENLMVGLNVAYAEKD 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R +L F + + ++ V V +P+ L + P G + ++
Sbjct: 139 ERGLIRAKLTVFALTVFLVIGVIFSLGVMVVLPIVLNVL----PLGGVVETVVRIVPWLV 194
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + + P + ++ + ILPG + + W +V F+ Y F +Y +
Sbjct: 195 LLIFTIGAFSILFRYGPDRRSARWVYILPGAVLACLLWGAASVGFSIYADNFGSYQESFG 254
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
LA + L++L++ + +LGA+LNA + +
Sbjct: 255 TLAGAIVLLMWLWISALVVLLGAKLNAEIEAQH 287
>gi|258508049|ref|YP_003170800.1| ribonuclease BN-like family protein [Lactobacillus rhamnosus GG]
gi|257147976|emb|CAR86949.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus GG]
gi|259649370|dbj|BAI41532.1| ribonuclease BN [Lactobacillus rhamnosus GG]
Length = 334
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ I AI + + A+ ++ LLS+FP I+F AN +LG ++ +
Sbjct: 38 KFWVFIKLAINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYL 95
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P + + + I +L + GL I A+A + +S GV L++ N+ Y V +
Sbjct: 96 TQAVPANVMEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQ 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ I RL+S + + + F L ++ + L R T+
Sbjct: 156 NFIIQRLLSMLMTFTLIIVMGAILIAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITV 215
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
ALFI ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y +
Sbjct: 216 TALFIIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIG 275
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + +++L + + GA +NA Y+ +
Sbjct: 276 TFIAIMLWLNFSALVLLWGAVINALTAEYFIGR 308
>gi|199598315|ref|ZP_03211735.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus HN001]
gi|199590768|gb|EDY98854.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus HN001]
Length = 334
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 2/273 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ I AI + + A+ ++ LLS+FP I+F AN +LG ++ +
Sbjct: 38 KFWVFIKLAINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYL 95
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P + + + I +L + GL I A+A + +S GV L++ N+ Y V +
Sbjct: 96 TQAVPANVMEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQ 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ I RL+S + + + VF L ++ + L R T+
Sbjct: 156 NFIIQRLLSMLMTFTLIIVMGAILIVFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITV 215
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
ALF+ ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y +
Sbjct: 216 TALFVIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIG 275
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + +++L + + GA +NA Y+ +
Sbjct: 276 TFIAIMLWLNFSALVLLWGAVINALTAEYFIGR 308
>gi|186476333|ref|YP_001857803.1| ribonuclease BN [Burkholderia phymatum STM815]
gi|184192792|gb|ACC70757.1| ribonuclease BN [Burkholderia phymatum STM815]
Length = 439
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 97/277 (35%), Gaps = 5/277 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFV 59
+R + + A + E+ +A ++ + +LS+ P L QF
Sbjct: 5 LRLDLDTLKRLAEFAAKRSGEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFAQFQ 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + L A AKGL T+ + S + + + N
Sbjct: 65 VSLQTFLAEHLMPDQVSSQIFRYLNQFASKAKGLTTLGMIILFVTSVMTMMTVESAFNVI 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + L + + L + + + + + + +
Sbjct: 125 WRVRKARPFAQRVLAYWAILTLGPILIGVSLSISSYLFTQSMTYTAAQRITPLIEWALAG 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ T+L +++FLP + + + G + I++ + F YI TY+
Sbjct: 185 ATLPLTVL----AFTMLYVFLPNCRVEWRDAIVGGVTAAIAFELAKRGFGFYIRRIPTYT 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y A + L+++Y+ + GA + +++
Sbjct: 241 AVYGAFAVVPLFLLWMYLSWFITLAGAMIASALPAIR 277
>gi|206974201|ref|ZP_03235118.1| YihY family protein [Bacillus cereus H3081.97]
gi|206747441|gb|EDZ58831.1| YihY family protein [Bacillus cereus H3081.97]
Length = 289
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 2/270 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ D + + +D +A+ ++ LL++FP +VF L GF+ +V++++
Sbjct: 12 RTYSFGKDLYDRTMRDDVAGLAAQLAYFFLLAIFPGLVFLITLLGFIDLQ--TESVLNLL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE I + +V+ GL + L+ +F+SNGV A+ + NRAY V E R
Sbjct: 70 EPYVPEDAMSLIEVNVDKVVNQQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVTETR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ TR +S + L +V V V + A V K + + R+ A+
Sbjct: 130 SFIKTRALSIVFTLAIIFMIVFALIVPVFGQVIGAAVFKAIGLSDSFSYVWSITRLVASF 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF F++ F P K K ++ G F + W+V + F +Y+ F+ Y+ +Y GL
Sbjct: 190 FVLFALFSFLYTFAPDRKLKRREVISGATFATVGWIVVSYSFAYYVDKFANYANIYGGLG 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ +++ Y+ G +LG E+N + Y
Sbjct: 250 GIIILMLWFYLTGWVILLGGEINGLLHHYR 279
>gi|158426274|ref|YP_001527566.1| ribonuclease BN [Azorhizobium caulinodans ORS 571]
gi|158333163|dbj|BAF90648.1| ribonuclease BN [Azorhizobium caulinodans ORS 571]
Length = 324
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 108/276 (39%), Positives = 163/276 (59%), Gaps = 1/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ ++ DA+ F+ +DGWA+ASHI+LS L+S+FPF++F LAGFL I
Sbjct: 30 LRRTYRVVMDAVWTFLADDGWAIASHIALSILMSLFPFLIFLTALAGFLDLRPLANEAIQ 89
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ WP+ +A+PI EI V+ + T+ A YFSSNG+E+LRI LNRAY + E
Sbjct: 90 LILETWPDAVAEPIAREIHNVVNQVRADVLTVGVALAIYFSSNGIESLRIGLNRAYGMKE 149
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+WY R+ S +VL+ + ++ +SF+ + PL + PAL + ++ R +
Sbjct: 150 HRAWYRLRVSSVLFVLVGAAGMLALSFLVILGPLIWQTMVNNVPALKPISGVVTFARFAS 209
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYA 243
T L L I L+ HL+LPA + +++ +LPG+ T W+V A +F Y+ F S Y T YA
Sbjct: 210 TALILIIALLMAHLWLPAGRRRLLDVLPGIGVTLTLWLVAATVFGIYLGEFSSNYVTTYA 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLAS+M LVFLY+ FI G ELNA+++ +
Sbjct: 270 GLASVMIALVFLYLTATAFIFGGELNAAILRDRRAR 305
>gi|146281873|ref|YP_001172026.1| ribonuclease BN, putative [Pseudomonas stutzeri A1501]
gi|145570078|gb|ABP79184.1| ribonuclease BN, putative [Pseudomonas stutzeri A1501]
Length = 265
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 1/257 (0%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
AS ++ L ++FPF+VF L GFL F + A P V + I I
Sbjct: 1 MSTYASALAYRGLFAMFPFLVFLIALLGFLDLQNFFDWLRMQAELALPPVAMEQINPVID 60
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
Q+ A GL + L A + +S G +L +LNRAY V E R + +++ Y +
Sbjct: 61 QLQEQQA-GLLSFGILVALWTASIGFRSLMNALNRAYDVEEGRPTWKLIILALAYTAGVA 119
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
V L+ + + V P A+ ++ ++++ R +L L + + ++ P
Sbjct: 120 VLLLFTAGLMVIGPQAMEWLAGQVGMRELVVVLWTWLRWPVIVLMLMLVVALLYYVAPDV 179
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ + I PG + + W++ +V F Y+ F+ Y+ Y + +I+ L++LY+ +
Sbjct: 180 EQEFRFITPGSVLAVLVWILASVAFGVYVQNFADYNATYGSIGAIIVLLLYLYISAAVLL 239
Query: 264 LGAELNASMIIYYWRKK 280
GAELNA + K
Sbjct: 240 FGAELNAVIEHASVEGK 256
>gi|229551895|ref|ZP_04440620.1| ribonuclease BN [Lactobacillus rhamnosus LMS2-1]
gi|258539317|ref|YP_003173816.1| ribonuclease BN-like family enzyme [Lactobacillus rhamnosus Lc 705]
gi|229314739|gb|EEN80712.1| ribonuclease BN [Lactobacillus rhamnosus LMS2-1]
gi|257150993|emb|CAR89965.1| Ribonuclease BN-like family enzyme [Lactobacillus rhamnosus Lc 705]
Length = 334
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 69/273 (25%), Positives = 124/273 (45%), Gaps = 2/273 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ I AI + + A+ ++ LLS+FP I+F AN +LG ++ +
Sbjct: 38 KFWVFIKLAINRISDSNIGQSAAALAYYTLLSLFPLILFVANALPYLGLK--YSSLATYL 95
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P + + + I +L + GL I A+A + +S GV L++ N+ Y V +
Sbjct: 96 TQAVPANVMEWLDPIIANLLDSSSGGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQ 155
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ I RL+S + + + F L ++ + L R T+
Sbjct: 156 NFIIQRLLSMLMTFTLIIVMGAILIAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITV 215
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
ALFI ++F+ FLP K K+ ++LPG FT I W++ A F+ Y+ F T Y +
Sbjct: 216 TALFIIIMFLDYFLPNVKIKMWTVLPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIG 275
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + +++L + + GA +NA Y+ +
Sbjct: 276 TFIAIMLWLNFSALVLLWGAVINALTAEYFIGR 308
>gi|307609441|emb|CBW98931.1| hypothetical protein LPW_07171 [Legionella pneumophila 130b]
Length = 412
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 113/271 (41%), Gaps = 11/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFG 68
+ I+HF+++D +AS ++ ++LL+V P + G + Q V + +F
Sbjct: 16 RFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAEPVQNFIFD 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ K + + Q + +K L + + + + + ++N+ +RV R
Sbjct: 76 NFVPATGKIVQSYLQQFTSQVSK-LSIWGIVFLIFTALLVMFTIERAMNKIWRVSSSRHG 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L+ + + LA V L + + P + Y+
Sbjct: 135 VSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTILHYSPFFL 185
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
IG F+++ +P KI G + I + F +Y++ ++TY+ +Y A++
Sbjct: 186 SLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYALLYGAFATV 245
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y + + +LGAE++ + +++ R+
Sbjct: 246 PIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|225181231|ref|ZP_03734676.1| ribonuclease BN [Dethiobacter alkaliphilus AHT 1]
gi|225168011|gb|EEG76817.1| ribonuclease BN [Dethiobacter alkaliphilus AHT 1]
Length = 281
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 119/271 (43%), Gaps = 2/271 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I E + A + +S +LS+FPF++F L + Q +D +
Sbjct: 4 ILSFIKQLYLRIQENETTARGAQLSYFFILSIFPFLIFLITLIDYTPLSQ--QHTLDQLA 61
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + + +V A L ++ L + +S G AL SLN+AY + E RS
Sbjct: 62 LLLPDNAFAIVEQIVSEVEAADNFTLLSLGILGTIWTASRGTAALIKSLNKAYDITESRS 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+++ I L ++ ++ V + ++ G + R +L
Sbjct: 122 FFVLNTIGIAATLALALLILFTLSFLVFGQVIGELAFQYLGLEGLFQALWPVLRFSIPLL 181
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+ + L+ P + ++ + PG IF+ ++W++ + F Y+ F +S Y +
Sbjct: 182 IIFVSFTLLFLYSPNCRLRLRHVYPGAIFSTLAWIIASQAFAFYVNNFGNFSRTYGSIGG 241
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
I+ +++LY+ V +LG E+NA++ + +
Sbjct: 242 IIVFMIWLYLSSVVVLLGGEINATLYNSFCK 272
>gi|226945729|ref|YP_002800802.1| Ribonuclease BN-like protein [Azotobacter vinelandii DJ]
gi|259552132|sp|C1DRV2|Y3681_AZOVD RecName: Full=UPF0761 membrane protein Avin_36810
gi|226720656|gb|ACO79827.1| Ribonuclease BN-like protein [Azotobacter vinelandii DJ]
Length = 408
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 99/281 (35%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
MR+ F D E F+ + G A+ ++ +AL +V P + + + Q +
Sbjct: 1 MRQRFVDSLDFWRYLFERFLADQGPKSAAALTYTALFAVVPIMTLIFVVLSVVPDFQGIG 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + D + + L + + + + + N
Sbjct: 61 EQIQGFIFRNFVPSSGAVLQDYLRTFIEQARH-LTWLGVGVLMVTALLMLMTVEHTFNTI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV R + L+ + + L + L + I + L
Sbjct: 120 WRVRRPRRGLSSFLLHWAILSLGPLLLGTGFALSTYITSLSLVSDPY------ALAGARM 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L +++ +P + L G +F + + LF Y+ F TY
Sbjct: 174 LLKVMPLLFSTAAFTLLYVAVPNTAVPLRHALLGGLFAAVLFEAAKGLFGLYVALFPTYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++Y+ + +LGAEL ++ ++
Sbjct: 234 LIYGAFAAVPLFLLWMYLSWMIVLLGAELVCNLSASRRWRR 274
>gi|124266615|ref|YP_001020619.1| putative ribonuclease BN transmembrane protein [Methylibium
petroleiphilum PM1]
gi|288559203|sp|A2SFP5|Y1422_METPP RecName: Full=UPF0761 membrane protein Mpe_A1422
gi|124259390|gb|ABM94384.1| putative ribonuclease BN transmembrane protein [Methylibium
petroleiphilum PM1]
Length = 416
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 94/267 (35%), Gaps = 9/267 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-- 63
D + + F E+ AS ++ + +++ P + +
Sbjct: 32 WPWLDTLKTLRQRFREDRLGLTASSLTFTTTIALVPLATVTLAIFSAFPMFGQFQGALEK 91
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P+ IAKP+ + Q A A L T+ + + + + +LN +RV
Sbjct: 92 YFIQSLVPDGIAKPVLGALTQF-AGKAHRLGTVGLVVLVLTALALMLTIDRTLNAIWRVR 150
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + L + L + + A V P +
Sbjct: 151 KPRPIAQRVLVYWAAATLGPLLLGVSLTLTSYAISASRGVVGAMPGS------LSVLLNA 204
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L + + ++P + + L G +F + + Y+ TYST+Y
Sbjct: 205 LEFGLLAAAMAGLFHYVPNTEVRWRHALAGGLFVSAGFELAKKGLAWYLAQVPTYSTIYG 264
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
A++ L++LY+ V +LGA + A
Sbjct: 265 AFATVPIFLIWLYLGWVIVLLGAVIAA 291
>gi|325103819|ref|YP_004273473.1| ribonuclease BN [Pedobacter saltans DSM 12145]
gi|324972667|gb|ADY51651.1| ribonuclease BN [Pedobacter saltans DSM 12145]
Length = 332
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + +E AS ++ + L++VFP I+F L ++ F ++ ++
Sbjct: 34 LYTVATFFFQEIGKESLVNKASSLAYNFLMAVFPAIIFLFTLIPYIPIKNFQNQLMAIIA 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE K D + ++ L +I L A +F++NG+ L + N++ +VE R+
Sbjct: 94 LLLPENAYKAFEDTLEDIVKNQNGKLLSIGFLLALFFATNGIHTLMQAFNKSSLIVETRT 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN--LLLIIWNGRIYAT 185
W RL++ +L ++++ + V L R+ N + +I GR
Sbjct: 154 WLKQRLVAMNLTVLTIFSIILGVSITVITEFILNTFREELNFENNKFWIFLITIGRWIII 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ F ++ + PA K PG + ++ + FT +I F Y+ +Y +
Sbjct: 214 VCVYFFTTSLLYRYGPANAKKWKLFSPGAWLATVLAILTTLGFTFFINNFGAYNKLYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+++ +++LY+ + ++G ELNAS+
Sbjct: 274 GTLLVVMIWLYLNSLILLIGFELNASLE 301
>gi|54293627|ref|YP_126042.1| hypothetical protein lpl0680 [Legionella pneumophila str. Lens]
gi|53753459|emb|CAH14914.1| hypothetical protein lpl0680 [Legionella pneumophila str. Lens]
Length = 412
Score = 142 bits (359), Expect = 4e-32, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 113/271 (41%), Gaps = 11/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFG 68
+ I+HF+++D +AS ++ ++LL+V P + G + Q V + +F
Sbjct: 16 RFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAEPVQNFIFD 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ K + + Q + +K L + + + + + ++N+ +RV R
Sbjct: 76 NFVPATGKIVQSYLQQFTSQVSK-LSIWGIVFLIFTALLVMFTIERAMNKIWRVSSSRQG 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L+ + + LA V L + + P + Y+
Sbjct: 135 VSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTILHYSPFFL 185
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
IG F+++ +P KI G + I + F +Y++ ++TY+ +Y A++
Sbjct: 186 SLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYALLYGAFATV 245
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y + + +LGAE++ + +++ R+
Sbjct: 246 PIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|52840880|ref|YP_094679.1| ribonuclease BN [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|81378036|sp|Q5ZXT8|Y643_LEGPH RecName: Full=UPF0761 membrane protein lpg0643
gi|52627991|gb|AAU26732.1| ribonuclease BN [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 412
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 113/271 (41%), Gaps = 11/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFG 68
+ I+HF+++D +AS ++ ++LL+V P + G + Q V + +F
Sbjct: 16 RFVRFVIQHFIQDDCTYIASALAFTSLLAVVPLMSVGLAIFSSFPVFQGLAEPVQNFIFD 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ K + + Q + +K L + + + + + ++N+ +RV R
Sbjct: 76 NFVPATGKIVQSYLQQFTSQVSK-LSIWGIVFLIFTALLVMFTIERAMNKIWRVSSSRHG 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L+ + + LA V L + + P + Y+
Sbjct: 135 VSAFLLYWAIISLAPVLLGLSLAASSYLFSMPILADHRAP---------YTILHYSPFFL 185
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
IG F+++ +P KI G + I + F +Y++ ++TY+ +Y A++
Sbjct: 186 SLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILFESAKHAFAYYLIRYNTYALLYGAFATV 245
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y + + +LGAE++ + +++ R+
Sbjct: 246 PIFFIWVYWVWIITLLGAEISYAFSVHHQRR 276
>gi|297531287|ref|YP_003672562.1| ribonuclease BN [Geobacillus sp. C56-T3]
gi|297254539|gb|ADI27985.1| ribonuclease BN [Geobacillus sp. C56-T3]
Length = 277
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 128/272 (47%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I + + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 5 LAFIRELVRRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQ 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R +
Sbjct: 63 YAPKEALHLIETNVHRLIDEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPF 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I R +S L + +++ + V + ++ L + R + L
Sbjct: 123 WIVRGLSIVLTLGMIMVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSSLL 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF ++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L +
Sbjct: 183 LFAVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLGGM 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +V+ Y+ G+ +LG ELNA K+
Sbjct: 243 IVLMVWFYLSGMILVLGGELNAMFDCEREGKR 274
>gi|262199043|ref|YP_003270252.1| ribonuclease BN [Haliangium ochraceum DSM 14365]
gi|262082390|gb|ACY18359.1| ribonuclease BN [Haliangium ochraceum DSM 14365]
Length = 499
Score = 142 bits (359), Expect = 5e-32, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 97/267 (36%), Gaps = 5/267 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFV 59
+R + + I +E+ A+ ++ LLS+ P + G L G +
Sbjct: 43 IRALSVRQLEALILTIHSLFDEELLRRAASLTYYTLLSLVPLLAVGFALFEAFGGLSKLK 102
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ +++ I + Q + A + + L Y + + + + NR
Sbjct: 103 EPLKELIVDTVAVGRQDEIGTWLNQFIDNVNAGAIAGVGVLVLFYSAIGLLTNIESAFNR 162
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + R ++ I + V LA L + + + L ++
Sbjct: 163 IWGIERDRPMHMRFAIYWCIVTLAPPLLGVSISFSARLQSSSFASSVLDWLPFGLGNLVV 222
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
AT+ + + + +P K K+ L G I T + W V L+ +I Y
Sbjct: 223 VLSSTATV---SLAFVLSFIIVPNTKVKVKYALLGGITTGVLWNVTKALYIWFIAGSVKY 279
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILG 265
S +Y L+++ +++LY+ + + G
Sbjct: 280 SAIYGALSALPLLMMWLYLSWIILLFG 306
>gi|333030451|ref|ZP_08458512.1| ribonuclease BN [Bacteroides coprosuis DSM 18011]
gi|332741048|gb|EGJ71530.1| ribonuclease BN [Bacteroides coprosuis DSM 18011]
Length = 439
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 98/276 (35%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + IY I+ FV++ A AS ++ S LL++ P + +A G + + T
Sbjct: 28 KFSLYNIIKTIYVTIKQFVDDRIAAKASALTYSTLLAIVPMLAILFAIARGFGFDKLMET 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ FG E +T + + + N + + ++ N ++
Sbjct: 88 QLFANFGGQTETTEAILTFVDSYLEHAKGGIFIGVGLAMLLWTVLNLINNIEVTFNHIWQ 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R+ Y F LL + +V S V + + A + + L +
Sbjct: 148 VKKSRNMYRKITDYFSMFLLMPILIVFSSGVTLFMSTVFAKMEDYIL----LGSLSKFLI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ +++F+P + LP I + + + S Y+ +
Sbjct: 204 KLIPFAITWLMFTGLYVFMPNTNVRFKHALPAGILAGTIYQFFQFFYISGQIWVSKYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A++ L++L + G +L + +
Sbjct: 264 YGSFAALPLFLLWLQTSWTICLFGVQLTYTSQNIRF 299
>gi|187924749|ref|YP_001896391.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
gi|187715943|gb|ACD17167.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
Length = 437
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +LS+ P L F ++
Sbjct: 9 LDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQMSLQ 68
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ L A AKGL TI + + + + + N +RV
Sbjct: 69 IFLADHLMPAQLNSQIFNYLNQFASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVIWRVR 128
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + + + + +
Sbjct: 129 KARPIAQRILVYWAIITLGPILIGVSLSISSYLFTQSMTFTAAQRMTPVIEWALTGAALP 188
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T + ++++LP + + + G + I++ + F +Y+ TY+ +Y
Sbjct: 189 LT----AVAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYTAVYG 244
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ LV++Y+ + GA + +++
Sbjct: 245 AFAAVPLFLVWMYLCWFITLAGAMIASALPAIR 277
>gi|152998866|ref|YP_001364547.1| ribonuclease BN [Shewanella baltica OS185]
gi|166199584|sp|A6WI45|Y314_SHEB8 RecName: Full=UPF0761 membrane protein Shew185_0314
gi|151363484|gb|ABS06484.1| putative ribonuclease BN [Shewanella baltica OS185]
Length = 323
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 107/276 (38%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEGFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + + + +
Sbjct: 129 WRTKEKRSVVVAFSMYWMVLTLGPVLVGASLVASSYVISLKVFEAEALSGMLPIFIAR-- 186
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G I + + +G F Y+ F +Y
Sbjct: 187 ----LPMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFELGKKGFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|160900398|ref|YP_001565980.1| ribonuclease BN [Delftia acidovorans SPH-1]
gi|160365982|gb|ABX37595.1| ribonuclease BN [Delftia acidovorans SPH-1]
Length = 448
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 9/260 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
E F E+ AS ++ + +L++ PF L V V+ ++ PE I
Sbjct: 61 ERFREDRLGVTASSLTFTTVLALVPFFTVALALFTAFPIFSRVQIVLERWLIDSLIPETI 120
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q A A L + + + +LN +RV ++R LI
Sbjct: 121 ARQVLGYLTQF-ASKASQLGMAGFSILVITAVALILTIDRTLNNIWRVRQLRPLGQRVLI 179
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + + + A + P + LAL G+
Sbjct: 180 YWAAITLGPLVLGLSLVLSSYVMSASRGLVNALPEG------LRFIFDSIEYLALAAGMA 233
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + Y+ + TYS +Y A++ L++
Sbjct: 234 GLYHYVPNTAVRWRHAWVGGLFVATCMELAKKALGLYLASVPTYSVIYGTFATLPILLIW 293
Query: 255 LYMLGVFFILGAELNASMII 274
+YM + +LGA + A + I
Sbjct: 294 IYMAWIIVLLGAVVTAYLPI 313
>gi|253699237|ref|YP_003020426.1| ribonuclease BN [Geobacter sp. M21]
gi|251774087|gb|ACT16668.1| ribonuclease BN [Geobacter sp. M21]
Length = 446
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 109/279 (39%), Gaps = 5/279 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +F+ + A+ +S + +LS+ P + ++ LGA
Sbjct: 27 KGRMVRLLQFFTFTFSNFMANNSLLRATALSFTTVLSLVPLLALAFSVLKGLGAQN---R 83
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + + + + + I A + + + + ++ + N A+
Sbjct: 84 LAPLILKQVTAGSEEVVNRVVSYIGNTNMGSVGAIGLAALIFTAISMLASVEEAFNVAWG 143
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS Y ++ A + L+ + + + ++ + L +
Sbjct: 144 VQETRSLYRKFSDYLSVLVSAPLLLLAATSITTTLQ--SKWLIGWLLERTYLGDLFLFML 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L++++ + +++F+P + + S L G + W + H+ V Y+ +
Sbjct: 202 GFTPYLSVWVAIFLLYIFIPNTRVRYSSALIGAVLAGTLWQFAQWAYIHFQVGAGNYNAI 261
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA++ +V++Y+ + + G E+ A+ + ++
Sbjct: 262 YGTLAALPILMVWIYVSWIIVLFGMEVVAAHQNRAFFRR 300
>gi|15596148|ref|NP_249642.1| ribonuclease [Pseudomonas aeruginosa PAO1]
gi|32699648|sp|Q9I507|Y951_PSEAE RecName: Full=UPF0761 membrane protein PA0951
gi|9946857|gb|AAG04340.1|AE004529_6 probable ribonuclease [Pseudomonas aeruginosa PAO1]
Length = 411
Score = 142 bits (358), Expect = 5e-32, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 95/269 (35%), Gaps = 8/269 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MRE+F + FV + A+ ++ + L +V P + ++ + A +
Sbjct: 1 MREHFNDGVEFARFLAHRFVTDKAPNSAAALTYTTLFAVVPMMTVMFSMLSLIPAFHGMG 60
Query: 61 T-VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + + A+ L + + A + + + + N
Sbjct: 61 ESIQTFIFRNFVPSAGEAVETYLKSF-TTQARHLTWVGVVFLAVTAFTMLVTIEKAFNEI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R L+ + + L + L V I + L
Sbjct: 120 WRVRQPRRGVGRFLLYWAILSLGPLLLGAGFAVTTYITSLS------LLHGPDALPGAET 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ +P A+ + L G +FT + + LF Y+ F Y
Sbjct: 174 LLGLMPLAFSVAAFTLLYSAVPNARVPVRHALMGGVFTAVLFEAAKTLFGLYVSLFPGYQ 233
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y A++ L+++Y+ + + GA L
Sbjct: 234 LIYGAFATVPIFLLWIYLSWMIVLFGAVL 262
>gi|89093622|ref|ZP_01166569.1| probable ribonuclease [Oceanospirillum sp. MED92]
gi|89082018|gb|EAR61243.1| probable ribonuclease [Oceanospirillum sp. MED92]
Length = 420
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 106/269 (39%), Gaps = 12/269 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGA 69
I F++ G A+ ++ + L +V P + + + + Q V + VF
Sbjct: 12 FIRYLFRQFLKNQGILNAAALTYTTLFAVVPLMTVSYAMLAAVPSFQGVGQELQGWVFDN 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + D + + + A+ L + A S ++ + + NR +RV E R
Sbjct: 72 FVPATGQVVQDYLNEF-SSQARKLTAVGVALLAVTSIMMMKNIEAAFNRIWRVTEPRKGL 130
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY--ATML 187
+ L+ + + L + + + + I P + ++ R+ +
Sbjct: 131 SSFLLYWAILSLGPILIGLGLVLTSYIASL--------PFINEATEVVGRARLLSLLPTI 182
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+++ +P + S L G + + + FT ++ F +Y +Y A+
Sbjct: 183 LSAAAFTLMYIAVPNCRVPFKSALLGGVVVALLFETAKRSFTAFVTQFPSYELIYGAFAA 242
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ L+++++ V ++GAEL +M +Y
Sbjct: 243 VPLFLLWIFISWVIILMGAELTRTMAVYR 271
>gi|295677064|ref|YP_003605588.1| ribonuclease BN [Burkholderia sp. CCGE1002]
gi|295436907|gb|ADG16077.1| ribonuclease BN [Burkholderia sp. CCGE1002]
Length = 435
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 98/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P L F ++
Sbjct: 8 LDTLKRLAQFAAQRIGEDRIPQVAGSLTFTTMLALVPLATVAFALFTAFPIFSSFQASLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL TI + + + + + N +RV
Sbjct: 68 FFLADHLMPAQLNDQIFKYLNQFASKAKGLTTIGMIILFVTAVMTMMTVESAFNVIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + + + + + +
Sbjct: 128 KARPVAQRILVYWAIITLGPILIGVSLSISSYLFTQSMSFSAAQRITPLIEWALASATLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
TML ++++LP + + + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 FTML----AFTILYVYLPNCRVEWRDAVVGGVIAAVAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ LV++Y+ + GA + +++
Sbjct: 244 AFAAVPLFLVWMYLCWFITLTGAMIASALPAIR 276
>gi|56964680|ref|YP_176411.1| hypothetical protein ABC2916 [Bacillus clausii KSM-K16]
gi|56910923|dbj|BAD65450.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 276
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/268 (22%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + +A+ ++ +LS+FP ++F F + V +++ +
Sbjct: 9 FTKKLIAQLKSDPIPDLAATLAFYFILSIFPLMIFVLAGVSFFEINN--DEVQNLINAYF 66
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P I + +L + P GL +I L + +SNG+ A S+NRAY + E R +
Sbjct: 67 PGEIGDTFSRIVLNTIGEPQAGLLSIGILGTLWSASNGINAFIRSVNRAYNIEETRHFLK 126
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R I+ G + + ++I + V L + F ++ ++ N R A +
Sbjct: 127 LRSIAIGLTVGMVLLIIITLALPVFGNQILNLLEAFLLLPTEVVAMLDNFRWIAAFAIMI 186
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L+ ++ P AK + L G IF I W + + F+ Y+ ++ Y + Y LA ++
Sbjct: 187 VALMALYWIAPNAKQRFRDGLIGAIFATIGWQLISFFFSLYVSNYANYESTYGPLAGVII 246
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + ++ G+ I+GAE+NA++ +
Sbjct: 247 LMFWFFLTGIILIVGAEINATLHHLRKK 274
>gi|332142905|ref|YP_004428643.1| hypothetical protein MADE_1017605 [Alteromonas macleodii str. 'Deep
ecotype']
gi|332143050|ref|YP_004428788.1| hypothetical protein MADE_1018330 [Alteromonas macleodii str. 'Deep
ecotype']
gi|288559237|sp|B4RYA6|Y3526_ALTMD RecName: Full=UPF0761 membrane protein MADE_03526
gi|327552927|gb|AEA99645.1| hypothetical protein MADE_1017605 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553072|gb|AEA99790.1| hypothetical protein MADE_1018330 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 294
Score = 142 bits (358), Expect = 6e-32, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 103/274 (37%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVV 66
+ D+ I+ E++ A H++ LLS+ PFI+ + A V + V
Sbjct: 17 LRDLFGIFIKRCKEDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRSKLEHFV 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + + + + + ++ + I L+ + + + +LNR +R R
Sbjct: 77 FSNFVPTASDVVHKYMTDFVGNASQ-MSAIGILSLLVVALMLISNVDKTLNRIWRTQSDR 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
T I + + L + + V + A+ ++ P LG
Sbjct: 136 PIVYTFAIYWMVITLGPMLIGSSVVVSSYLTGLAAFTEEYTPGLGTF------LLSLVPS 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A + +++ +P + G I I++ + F Y+ F +Y +Y LA
Sbjct: 190 GAALLAFAILYMVVPNRRVYARHAFVGAIVATIAFEITKSGFALYVTNFPSYELIYGALA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++Y+ + + GAE S+ + KK
Sbjct: 250 VVPILFLWVYLSWIIVLFGAEFTCSLGEAFENKK 283
>gi|300114145|ref|YP_003760720.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299540082|gb|ADJ28399.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 455
Score = 142 bits (357), Expect = 6e-32, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 99/267 (37%), Gaps = 2/267 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y F + D A+ + + LLS+ P + ++ G H +
Sbjct: 28 RAFLRQKAKFVYAVSREFFKGDLTLQATSLVYTTLLSLAPLLAVSFSVLKAFGIHNEIEP 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ + T I V + L ++ Y + ++ + + N +R
Sbjct: 88 VLHHFLLPLGPRGEEITTKIIQYVENLKVGVLGSVGVGLLFYTVISLIQKVEGAFNHVWR 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + +L+ V + ++ + L +
Sbjct: 148 IKAERPFARRFSDYLSVLLIGPVLVFSAVGATASVMQTS--FIQTLLDFELLGKTLVVMS 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + G F++LFLP K ++ S L G I W +LF ++ T + Y +
Sbjct: 206 KLLPYLLVIAGFTFIYLFLPNTKVRLGSALVGGAVAGILWETIGILFAFFVTTSTKYDAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ A ++ +++LY+ + ++GA++
Sbjct: 266 YSSFAIVILFMIWLYISWLVLLVGAQV 292
>gi|126172568|ref|YP_001048717.1| ribonuclease BN [Shewanella baltica OS155]
gi|160873444|ref|YP_001552760.1| ribonuclease BN [Shewanella baltica OS195]
gi|166199583|sp|A3CZD5|Y315_SHEB5 RecName: Full=UPF0761 membrane protein Sbal_0315
gi|189039572|sp|A9KXA4|Y319_SHEB9 RecName: Full=UPF0761 membrane protein Sbal195_0319
gi|125995773|gb|ABN59848.1| tRNA-processing RNAse BN [Shewanella baltica OS155]
gi|160858966|gb|ABX47500.1| ribonuclease BN [Shewanella baltica OS195]
gi|315265673|gb|ADT92526.1| ribonuclease BN [Shewanella baltica OS678]
Length = 323
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 107/276 (38%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEGFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + + + +
Sbjct: 129 WRTKEKRSVVVAFSMYWMVLTLGPVLVGASLVASSYVISLKVFEAEALSGMLPIFIAR-- 186
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G I + + +G F Y+ F +Y
Sbjct: 187 ----LPMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFELGKKGFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|217971528|ref|YP_002356279.1| ribonuclease BN [Shewanella baltica OS223]
gi|254789781|sp|B8E4B5|Y320_SHEB2 RecName: Full=UPF0761 membrane protein Sbal223_0320
gi|217496663|gb|ACK44856.1| ribonuclease BN [Shewanella baltica OS223]
Length = 323
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 107/276 (38%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWHFLLHLRRRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEGFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGISALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + + + +
Sbjct: 129 WRTKEKRSVVVAFSMYWMVLTLGPVLVGASLVASSYVISLKVFEAEALSGMLPIFIAR-- 186
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G I + + +G F Y+ F +Y
Sbjct: 187 ----LPMLFSVAAFLLLYMVVPNQKVKFLHALLGAIVAALLFELGKKGFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPIVFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|138894066|ref|YP_001124519.1| ribonuclease BN [Geobacillus thermodenitrificans NG80-2]
gi|134265579|gb|ABO65774.1| Ribonuclease BN [Geobacillus thermodenitrificans NG80-2]
Length = 273
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 3 FVRELARRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + ++ V L ++S + A + +SNG+ A+ + NRAY V E R +++
Sbjct: 61 PKEALHLIETNVHHLMDVQNGKLLSLSIIGAVWSASNGMRAIMRAFNRAYDVEENRPFWV 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S L +++ + V ++ L + R + L LF
Sbjct: 121 ARGLSVALTLGMIAVIIVALVLPVFGRTIGLFLFSALGLSEQFLTVWNAFRWTTSSLLLF 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L ++
Sbjct: 181 AVFTALYYFAPNKQLRCVNVVRGALFATAGWIATSLAFAYYVNHFANYTAMYGSLGGLIV 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++LY+ G+ +LG E+NA +K
Sbjct: 241 LMIWLYLSGMILVLGGEMNAIFDCEREGRK 270
>gi|224370355|ref|YP_002604519.1| predicted tRNA processing ribonuclease Rbn (RNase BN)
[Desulfobacterium autotrophicum HRM2]
gi|223693072|gb|ACN16355.1| predicted tRNA processing ribonuclease Rbn (RNase BN)
[Desulfobacterium autotrophicum HRM2]
Length = 436
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 106/276 (38%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + VF + A++ F +++ AS ++ LLS+ P + +A G +
Sbjct: 22 LKAFATRVFLTVVAAVKGFQKDNCMLRASALTFYTLLSIVPVMAMAFGIAKGFGFETMLR 81
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + E + I + + + + A+ + + + N +
Sbjct: 82 KEILLRLAGHEEAAQRIIDFSGTLLAETKGGVMAAVGVIFLAWAVVKMLGHMEDAFNTIW 141
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + R+ G + +A + L++ V I L + + + ++
Sbjct: 142 WIKKGRTLVRKFSDYLGLLFVAPLLLILSGSTTVFILTRLKVFFEATGGVVFVEPFVFFF 201
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++I F+++F+P K I + + G + + +G +++ + V S Y+
Sbjct: 202 VKLLPFFTIWILFFFLYMFMPNKKVDIRAAVMGALIAGGVYQMGQMIYFRFQVGVSHYNA 261
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y A++ L++L V +LGAE+
Sbjct: 262 IYGSFAALPLFLIWLQASWVLLLLGAEIAFVWEGRR 297
>gi|226945350|ref|YP_002800423.1| Ribonuclease BN protein [Azotobacter vinelandii DJ]
gi|226720277|gb|ACO79448.1| Ribonuclease BN protein [Azotobacter vinelandii DJ]
Length = 289
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 58/271 (21%), Positives = 123/271 (45%), Gaps = 1/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ A++ F++++ AS ++ L S+FPF++F L GFL +F +
Sbjct: 13 EVLKCAVKDFMDDEMPTYASALAFQMLFSLFPFLLFLIALIGFLDLQKFFDWLQQQAALL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I Q GLF++ +AA + +S GV + ++N+AY V E R +
Sbjct: 73 LPAQAMDTVNSVIAQFQQE-RAGLFSLGIVAALWTASAGVRSTMQAMNKAYDVAESRPAW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+S Y + ++ L+ + + + P + ++ + ++ + R +L L
Sbjct: 132 KRIPLSVLYTVGIALMLLSAAGLMLIGPEVMTWLAGWVGLEQLIVTLWTWLRWPVAILLL 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ P + + I PG + + W+ ++ F Y+ F Y Y + +I+
Sbjct: 192 ILVVAVIYYVAPDVEQRFRFITPGSVLAVLVWIATSLGFGFYVGNFGNYDATYGSVGAII 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++ ++ + GAELNA + + K
Sbjct: 252 VMLLYFFISAAVLLFGAELNAVIEHRHPEGK 282
>gi|307942625|ref|ZP_07657973.1| YihY family protein [Roseibium sp. TrichSKD4]
gi|307774264|gb|EFO33477.1| YihY family protein [Roseibium sp. TrichSKD4]
Length = 284
Score = 142 bits (357), Expect = 7e-32, Method: Composition-based stats.
Identities = 124/275 (45%), Positives = 167/275 (60%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ DA+ HFV +DG+AMASH++LSALL+VFP ++F A LAGF+G H
Sbjct: 5 RTITTTYLVLKDALGHFVNDDGYAMASHVALSALLAVFPLLIFIAALAGFMGFHDAADRA 64
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++VF AWPE +AKP+ DEI +VL VP L T + A +F+SNGVEA+R +LNRAYR
Sbjct: 65 SNLVFDAWPENVAKPLVDEIHRVLTVPRGDLLTFGVVGALWFASNGVEAMRSALNRAYRQ 124
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS RL S G V+L +V L+ +F+ V PL + V + PA L+ I R
Sbjct: 125 QEKRSIVFLRLQSLGLVILGAVVLIAYTFLVVLAPLVIKTVVNWIPAAEEFLVTIDVARY 184
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L IGL+ H LP+ K +LPGV+ T + W+V +F Y+ F+TY T Y
Sbjct: 185 SVAGSLLTIGLLLTHWILPSGSRKFRELLPGVVATLVMWMVAGAVFGAYLAKFATYVTTY 244
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
GLA IM+ +VFLY+ + FILG ELNASMI
Sbjct: 245 GGLAGIMSAVVFLYICSLGFILGGELNASMIRLRR 279
>gi|114763244|ref|ZP_01442668.1| Ribonuclease BN [Pelagibaca bermudensis HTCC2601]
gi|114544042|gb|EAU47052.1| Ribonuclease BN [Roseovarius sp. HTCC2601]
Length = 313
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 58/266 (21%), Positives = 106/266 (39%), Gaps = 8/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ E+ +A+ ++ LL++FP I +AG V I + P+
Sbjct: 25 RVKDGIGEDRLSLIAAGVAFFGLLAIFPAITALMAVAGLFLTPADVTDQIQQISAMLPDR 84
Query: 74 IAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A+ + D+ V + A Y +S GV L LN AY E R +
Sbjct: 85 AAEIVIDQAKSVAGSDQGGLGLAALLGLGLALYSASAGVGNLVAGLNVAYGERESRGFVK 144
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L + L V LV+ + +P LA + P G L++ R +
Sbjct: 145 LKLTTMALTFLLIVGLVLAFAGVLILPGVLAVI----PLGGTAELLVSGLRWVLLLGFTV 200
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ F P + + + PG + W+V +V F+ Y F +Y + LA ++
Sbjct: 201 LAVALIYHFGPDRRPARWRWVTPGAAIACLLWIVTSVGFSIYAENFGSYQETFGSLAGVV 260
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
L +L++ +LG ++NA +
Sbjct: 261 ILLFWLWISAFVVLLGGKINAELEHQ 286
>gi|261418745|ref|YP_003252427.1| ribonuclease BN [Geobacillus sp. Y412MC61]
gi|319765561|ref|YP_004131062.1| ribonuclease BN [Geobacillus sp. Y412MC52]
gi|261375202|gb|ACX77945.1| ribonuclease BN [Geobacillus sp. Y412MC61]
gi|317110427|gb|ADU92919.1| ribonuclease BN [Geobacillus sp. Y412MC52]
Length = 277
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 128/272 (47%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I + + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 5 LAFIRELVRRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQ 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R +
Sbjct: 63 YAPKEALHLIETNVYRLMNEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPF 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I R +S L + +++ + V + ++ L + R + L
Sbjct: 123 WIVRGLSIVLTLGMIMVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSSLL 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF ++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L +
Sbjct: 183 LFAVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLGGM 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +V+ Y+ G+ +LG ELNA K+
Sbjct: 243 IVLMVWFYLSGMILVLGGELNAMFDCEREGKR 274
>gi|152965485|ref|YP_001361269.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151360002|gb|ABS03005.1| putative ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 317
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 113/269 (42%), Gaps = 10/269 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ A ++ +A+ ++ A L++FP + + G G + + I+ +
Sbjct: 22 WLAVTKRAWAEAKDDQVPLLAAGVAFKAFLAIFPALTAAFLIWGIFGDTAQITSQINGIT 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
PE +T ++ V + ++ + A + +S+GV+ L + N AY E
Sbjct: 82 A-IPEEARNLVTSQVQNVANGKSTAGITAIVAVVLALWSASSGVQNLMAATNTAYDEKET 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + + L A V +++ + P+ + + A G + L++ R
Sbjct: 141 RGFVKLKGTALLLTLGAIVFMLLAIALIGVAPVLVKAL----GASGLVSLVVNVLRWVLL 196
Query: 186 MLALFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFS--TYSTMY 242
+ L + L V+ P + + G + W++ + F+ Y+ T +Y+ Y
Sbjct: 197 LGLLLVALAVVYRVAPDRDAPRAKWVSVGAGVATVLWLIVSAGFSIYVSTAGQSSYAKNY 256
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+A ++ L++L++ +LGAE+NA
Sbjct: 257 GSMAGVVVLLMWLWLTSYAILLGAEVNAE 285
>gi|254476019|ref|ZP_05089405.1| ribonuclease BN [Ruegeria sp. R11]
gi|214030262|gb|EEB71097.1| ribonuclease BN [Ruegeria sp. R11]
Length = 309
Score = 142 bits (357), Expect = 8e-32, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 106/278 (38%), Gaps = 8/278 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+++ A + G +A+ ++ LLSVFP + L G +
Sbjct: 35 RRLPRWARLMWHAWQRMDRAKGGLLAAGVAFYGLLSVFPGMTAAVALFGMFADPTVITEQ 94
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRA 119
+ P A + +++ V L + L A + +S +L LN
Sbjct: 95 SAWLTRLLPPSAADLLNGQLVDVAMERPDRLGWAAILSISIAFWSASRAANSLMQGLNVI 154
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y E R + + A V + + V AIP ALA F L I
Sbjct: 155 YNRAERRGMVMLYIRQLIITFAAIVGALFLVLVVAAIPAALAL----FGDSPLLSDIAQV 210
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R ++ +G+ ++ F P + + I PG + WV G++ F++Y+ F +Y
Sbjct: 211 VRWPLMFVSGMVGISLLYRFGPDRRGEEWHRITPGAFVSCSLWVAGSIGFSYYVRVFGSY 270
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
S + L+ ++ L ++++ + GA ++A +
Sbjct: 271 SETFGTLSGVVLLLTWMWLSAFVVLYGAGIDAERPEHR 308
>gi|320108330|ref|YP_004183920.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319926851|gb|ADV83926.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 324
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 110/272 (40%), Gaps = 3/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF--VPTVIDVVFG 68
+ +E++ + AS ++ ++FP ++ +++ G ++D +
Sbjct: 36 VAKRTWTAVIEDNLFGRASQLAYYFFFALFPTLIAMSSVMGLAAKSATHIYVQLLDKIAS 95
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + D Q + T+ L A + +S GV A++ +LN Y+V E RS+
Sbjct: 96 LVPPAAFGIVMDTFHQTTQASSTRKVTLGLLTALWSASVGVSAIQDTLNAVYKVKETRSY 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ R + + S+ L + + VR F + + L
Sbjct: 156 WRARGEAMVLTIAVSLVLTAALGALLGGSIGAELVRYKFSGAIAVSIATRTVAWIVATLL 215
Query: 189 LFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++ F P K K PG + WV+G++ Y+ F +YS Y L +
Sbjct: 216 MVLIFALLYFFSPDVQKRKWHWFSPGSAIGLLGWVLGSLGLRLYLHWFDSYSVTYGSLGA 275
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L + Y+ G+ +LGAE+N+ + K
Sbjct: 276 VIILLTWFYVAGLMLLLGAEVNSEIEAAVAEK 307
>gi|167587384|ref|ZP_02379772.1| Ribonuclease BN [Burkholderia ubonensis Bu]
Length = 442
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 96/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + A + E+ +A ++ + +L++ P + L ++
Sbjct: 8 LDTIKRLARFAAKRSAEDRIPQVAGSLTFTTMLALVPLVTVAFALFTAFPMFASFQISLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL T + S + + + N +RV
Sbjct: 68 GFLADHLMPAQFNIQIFKYLNQFASKAKGLTTAGLIVLVVTSVMTMMTIESAFNLIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + + L + + + + P + ++ +
Sbjct: 128 KPRPFAQRVLAYWALITLGPLLFGVSLSISSYLFTQSLAFTGAAPTTSVVEWLLTFASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + G +F I++ + F +Y+ TY+ +Y
Sbjct: 188 LTVL----AFTLLYVYLPNCTVAWRDAVVGGLFAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ +LG + +++
Sbjct: 244 AFAALPVFLLWVYLSWFIALLGGMVTSALPAIR 276
>gi|56418955|ref|YP_146273.1| transporter [Geobacillus kaustophilus HTA426]
gi|56378797|dbj|BAD74705.1| transporter [Geobacillus kaustophilus HTA426]
Length = 277
Score = 141 bits (356), Expect = 8e-32, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 127/272 (46%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 5 LAFIRELARRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQ 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + +++ GL + S +AA + +SNG+ A+ + NRAY V E R +
Sbjct: 63 YAPKEALHLIETNVYRLMNEQNGGLLSFSIIAAIWSASNGMSAIMRAFNRAYDVQEDRPF 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I R +S L V +++ + V + ++ L + R + L
Sbjct: 123 WIVRGLSIVLTLGMIVVIIVALVLPVFGRIIGLFLFSALGLSQQFLEVWNAFRWVTSSLL 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF ++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L +
Sbjct: 183 LFAVFTALYYFAPNKQLRCVNVVRGALFATAGWIAASLAFAYYVNNFADYTAMYGSLGGM 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +V+ Y+ G+ +LG ELNA K+
Sbjct: 243 IVLMVWFYLSGMILVLGGELNAMFDCEREGKR 274
>gi|196250266|ref|ZP_03148959.1| ribonuclease BN [Geobacillus sp. G11MC16]
gi|196210155|gb|EDY04921.1| ribonuclease BN [Geobacillus sp. G11MC16]
Length = 277
Score = 141 bits (356), Expect = 9e-32, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + F E++ +++ ++ LLS+FPF++F L +L V+ +V
Sbjct: 7 FVRELARRFTEDEIPRLSAELAYYFLLSLFPFLLFLMTLLAYLPIPH--EDVLALVRQYA 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + ++ V L ++S + A + +SNG+ A+ + NRAY V E R +++
Sbjct: 65 PKEALHLIETNVHHLMDVQNGKLLSLSIIGAVWSASNGMRAIMRAFNRAYDVEENRPFWV 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S L +++ + V ++ L + R + L LF
Sbjct: 125 ARGLSVALTLGMIAVIIVALVLPVFGRTIGLFLFSALGLSEQFLTVWNAFRWTTSSLLLF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ F P + + ++++ G +F W+ ++ F +Y+ F+ Y+ MY L ++
Sbjct: 185 AVFTALYYFAPNKQLRCVNVVRGALFATAGWIATSLAFAYYVNHFANYTAMYGSLGGLIV 244
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++LY+ G+ +LG E+NA +K
Sbjct: 245 LMIWLYLSGMILVLGGEMNAIFDCEREGRK 274
>gi|163750691|ref|ZP_02157927.1| ribonuclease BN [Shewanella benthica KT99]
gi|161329535|gb|EDQ00527.1| ribonuclease BN [Shewanella benthica KT99]
Length = 314
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIA 75
+ E+ A H++ LLS+ P + ++ + + ++ +
Sbjct: 6 QRLAEDQINIRAGHLAYVTLLSLVPMVTVTMSMLSAFPVFSDIRGQIESFIYDNFLPAAG 65
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + + +KG + A + + + SLN +R E RS ++ +
Sbjct: 66 DSVQVYINEFVDNASKG-TAVGIAALMVVAIMLISNIDKSLNSIWRTTEKRSIAVSFSMY 124
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ + L V + + + ++ + + +
Sbjct: 125 WMVLTLGPVLMGASLVATSYVVSLKVFSGA------DISGFVPLLVERLPLFFSVATFLL 178
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K K L G + + + G F Y+ F +Y +Y LA I V++
Sbjct: 179 IYMVVPNTKVKFFHALLGAVAAALLFEFGKKGFAFYLTEFPSYEAIYGALAVIPILFVWV 238
Query: 256 YMLGVFFILGAELNASMIIYYWRKKP 281
Y+ + ++GAE+ A++ Y +K P
Sbjct: 239 YLSWIIVLIGAEITAALPEYLDKKLP 264
>gi|188994855|ref|YP_001929107.1| putative ribonuclease BN [Porphyromonas gingivalis ATCC 33277]
gi|188594535|dbj|BAG33510.1| putative ribonuclease BN [Porphyromonas gingivalis ATCC 33277]
Length = 475
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 101/275 (36%), Gaps = 3/275 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
F ++ I +F++ D AS ++ +LS+ P + +A G Q V
Sbjct: 63 RLMINSFKSVFLTIRYFIQNDLATQASALTYRTILSIVPMLAVLIGIAKGFGIQQVVHDW 122
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + + + + + V + + Y + + + + ++
Sbjct: 123 LKEYLPGHQQELEQALGYVENYLAQVQGGIFVGVGLIVLLYTVFSLIATVEDTFTDIWQT 182
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R+W + G L + + S + + + + G +L +I N
Sbjct: 183 NKRRTWKRRVIDYMGAFFLLPILITASSGLTLMMTTIKGTYFSEYILFGPMLELILNLIP 242
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
Y ++ LF G +++ LP + + I + + L+ I+ S Y+ +Y
Sbjct: 243 YVIIVLLFTG---MYIVLPTVNVRFWPAFISGVLAGIVFQIFQALYISGILWISKYNAIY 299
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++ + + GA+L+ S+
Sbjct: 300 GSFAAVPLLLLWIQLSWTIVLFGAQLSFSIQNVRK 334
>gi|269925355|ref|YP_003321978.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
gi|269789015|gb|ACZ41156.1| ribonuclease BN [Thermobaculum terrenum ATCC BAA-798]
Length = 319
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 111/281 (39%), Gaps = 13/281 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL----GAHQFVPTVI 63
+ D++ + E+ A+ ++ + ++FPF+ F ++ G G +
Sbjct: 28 IADLLKQVWKEASEDHLGDFAASLTYHGIFAIFPFLTFLISMLGIFDKVLGVFDTSQLIK 87
Query: 64 DVV-----FGAWPEVIAKPITDEILQVLAVPAKGLFTIS----ALAAAYFSSNGVEALRI 114
D + A P + + +I +++ G FT L A + S ++
Sbjct: 88 DFLSRPQVRQAIPVEVIDFVQQQIDRLIGNIRPGTFTTGAIVSVLLALWGVSGAFRSIME 147
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
SLN Y + + R + LIS ++A + L+ + V P ++ +
Sbjct: 148 SLNVVYEIKDSRPIWKKYLISIMLSVIAVLLLLSAGILAVFGPKIADWLARTTGLGTLFA 207
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ +L + ++ + P K + + PG I + W+V ++F+ Y+
Sbjct: 208 WSWKIAQWPLLILIALLAFALIYHYGPDIKQPLRLVTPGSILALLGWLVFTLIFSLYVNN 267
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
F Y+ Y LA + ++++Y ++G E+N + Y
Sbjct: 268 FGNYNKTYGTLAGAILLMLYMYYSSYILLMGGEVNHVVETY 308
>gi|329113280|ref|ZP_08242063.1| Putative ribonuclease-like protein YfkH [Acetobacter pomorum DM001]
gi|326697421|gb|EGE49079.1| Putative ribonuclease-like protein YfkH [Acetobacter pomorum DM001]
Length = 356
Score = 141 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 119/273 (43%), Gaps = 9/273 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ ++ + +A+ + LS+FP I ++ G Q V ++V+
Sbjct: 74 ILQRTVKSLISGPTTLVAAGCAFYTTLSLFPAISSLISIYGLAFDVQTVAPQMEVLRNLL 133
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + D + ++A P L + A + +S ++ +LN AY E R+
Sbjct: 134 PPNAFTLLYDRVQTLVAEPPSSLTFNLIISVSVALWSASAATRSIISALNIAYNTRENRN 193
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++I ++ +F L + V+ + VA+PL L + I + R ++
Sbjct: 194 FFIFQITAFALTLCGILGAVLTLALMVAMPLLL-NLPALLHIPTPPGSIEFMARWSGPVV 252
Query: 188 ALF---IGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L ++ F P + +LPG + + ++W+ ++ F++Y+ ++YS Y
Sbjct: 253 MFTFETLALSALYRFGPNRHISTQWRWVLPGAVCSTLTWIAASLGFSYYVAHIASYSATY 312
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L + + +++ ++ ++GAELNA M Y
Sbjct: 313 GPLGAFIAIMMWFFVTAWVVLMGAELNAEMESY 345
>gi|315121834|ref|YP_004062323.1| ribonuclease protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495236|gb|ADR51835.1| ribonuclease protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 284
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 225/280 (80%), Positives = 255/280 (91%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++YF I+F+I+YDA+EHFVEEDGWAMASHISL+ALLSVFPFIVF ANLAGFLGAH+FVP
Sbjct: 1 MQKYFGIIFNIVYDAVEHFVEEDGWAMASHISLAALLSVFPFIVFCANLAGFLGAHEFVP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TVI V FGAWP+VIAKPITDEI QVLAVP KGLFTISALAA YFSSNG+EALR+SLNRAY
Sbjct: 61 TVISVFFGAWPDVIAKPITDEIFQVLAVPRKGLFTISALAAVYFSSNGIEALRVSLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVVEMRSWYITRLIS GYVLLAS+TLVIMSF+FV +PLALAYV+ FP+LGN++ I+WNG
Sbjct: 121 RVVEMRSWYITRLISLGYVLLASITLVIMSFIFVVVPLALAYVKTLFPSLGNMVEIVWNG 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R+Y +LALFIGLIFVHLFLPA K K+ +LPG+IFT ISW++GAVLFTHYIVTFSTYS
Sbjct: 181 RLYGAVLALFIGLIFVHLFLPAGKRKVWIVLPGIIFTSISWLIGAVLFTHYIVTFSTYSA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
MYAGLASI CLVFLYMLGV FI+GAE+NAS II+YW K+
Sbjct: 241 MYAGLASITICLVFLYMLGVIFIIGAEINASTIIHYWEKR 280
>gi|110802092|ref|YP_697602.1| YihY family protein [Clostridium perfringens SM101]
gi|110682593|gb|ABG85963.1| YihY family protein [Clostridium perfringens SM101]
Length = 283
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 65/278 (23%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F NL GF + T
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMNLVGFSHLNS--DT 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 ILNLLSNVMPTEAFNLIQSTVIEIVDKEQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKETRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFIKVLEHPEVIYYIWNMLR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMVLFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|323526753|ref|YP_004228906.1| ribonuclease BN [Burkholderia sp. CCGE1001]
gi|323383755|gb|ADX55846.1| ribonuclease BN [Burkholderia sp. CCGE1001]
Length = 436
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P L F ++
Sbjct: 8 LDTLKRLAQFAAKRSGEDRIAQVAGSLTFTTMLALVPLATVAFALFTAFPLFSSFQESLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL TI + + + + N +RV
Sbjct: 68 FFLADHLMPAQLNSQIFKYLNQFASKAKGLTTIGMVLLFLTGVMTMMTIESAFNVIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + + F A + +I
Sbjct: 128 KARPIAQRILVYWAIITLGPILIGVSLSISSYLFTQSM----TFSAAQRMTPVIEWALAG 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + ++++LP + + + G + I++ + F +Y+ TY+ +Y
Sbjct: 184 TALPLTALAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRMPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+++ L+++Y+ + GA + +++
Sbjct: 244 AFSAVPLFLLWMYLCWFITLAGAMIASALPAIR 276
>gi|23010564|ref|ZP_00051208.1| COG1295: Predicted membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 310
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 107/277 (38%), Positives = 159/277 (57%), Gaps = 1/277 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
VFD+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG G+
Sbjct: 13 RLRKVFDVAGLAAQRFVAHDGWAIASHIALSMLTSLFPFLILVAALAGLFGSKSLADEAG 72
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 73 TLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIR 132
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
EMR W++TRL S GYV+ + ++ +F+ V PL + P L L L + GRI
Sbjct: 133 EMRPWWLTRLESIGYVVCGAFAMLAFAFLVVLGPLIWRQLVFVAPGLEPLGLTVAIGRIV 192
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T + + + L+ H F+ A + +S++PG+ T W + + F Y+ FS Y++ Y
Sbjct: 193 ITAVLIAMVLVIAHKFVAAGRRPFLSVMPGIAVTLGLWFLAGLGFGFYLDRFSNAYASTY 252
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 253 GGLATAMIFLVFLYWLAAMFLFGGEVNGTVIAARRQR 289
>gi|209963912|ref|YP_002296827.1| tRNA-processing ribonuclease BN [Rhodospirillum centenum SW]
gi|288559240|sp|B6IRC8|Y578_RHOCS RecName: Full=UPF0761 membrane protein RC1_0578
gi|209957378|gb|ACI98014.1| tRNA-processing ribonuclease BN [Rhodospirillum centenum SW]
Length = 444
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 104/270 (38%), Gaps = 11/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
++ A+ F +G+A+A+ ++ + LL++ P + + A+ + T +++F +
Sbjct: 24 VVRHAVPRFWNNNGFAIAASLTYTTLLALVPLLTVTFAIFSAFPAYGRLRDTARELIFDS 83
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
++ + Q ++ A L + + S ++ +LN +R E R
Sbjct: 84 LAPSVSDEVQAYFDQFISN-AAALTGFGVIGLSLTSILLFFSVEAALNVIFRATEPRPLV 142
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I L + + + + L V + L + + R L
Sbjct: 143 IRLLSFWAVLTIMPLLLGASLSVTSGVVADLQATGRD---------AVTVLRFMLPGLLE 193
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L +P + + L G I + V V F YI F TY T+Y L+ I
Sbjct: 194 AAAFTLMFLMIPNREVQWFDALVGGIAAALLMEVSKVGFGLYIAAFPTYETIYGALSVIP 253
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L +LY + + GAE+ A++ + K
Sbjct: 254 IFLFWLYTVWSVVLFGAEITATLPEWRAGK 283
>gi|258543569|ref|YP_003189002.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01]
gi|256634647|dbj|BAI00623.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01]
gi|256637703|dbj|BAI03672.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-03]
gi|256640757|dbj|BAI06719.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-07]
gi|256643812|dbj|BAI09767.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-22]
gi|256646867|dbj|BAI12815.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-26]
gi|256649920|dbj|BAI15861.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-32]
gi|256652910|dbj|BAI18844.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655964|dbj|BAI21891.1| t-RNA-processing ribonuclease BN [Acetobacter pasteurianus IFO
3283-12]
Length = 356
Score = 141 bits (355), Expect = 1e-31, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 119/273 (43%), Gaps = 9/273 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ ++ + +A+ + LS+FP I ++ G Q V ++V+
Sbjct: 74 ILQRTVKSLISGPTTLVAAGCAFYTTLSLFPAISSLISIYGLAFDVQTVAPQMEVLRSLL 133
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + D + ++A P L + A + +S ++ +LN AY E R+
Sbjct: 134 PPNAFNLLYDRVQTLVAEPPSSLTFNLIISVSVALWSASAATRSIIAALNIAYNTRENRN 193
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++I ++ +F L + V+ + VA+PL L + I + R ++
Sbjct: 194 FFIFQITAFALTLCGILGAVLTLALMVAMPLLL-NLPALLHIPTPPGSIEFMARWSGPVV 252
Query: 188 ALF---IGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L ++ F P + +LPG + + ++W+ ++ F++Y+ ++YS Y
Sbjct: 253 MFTFETLALSALYRFGPNRHISTQWRWVLPGAVCSTLTWIAASLGFSYYVAHIASYSATY 312
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L + + +++ ++ ++GAELNA M Y
Sbjct: 313 GPLGAFIAIMMWFFVTAWVVLMGAELNAEMESY 345
>gi|302877777|ref|YP_003846341.1| ribonuclease BN [Gallionella capsiferriformans ES-2]
gi|302580566|gb|ADL54577.1| ribonuclease BN [Gallionella capsiferriformans ES-2]
Length = 400
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 97/275 (35%), Gaps = 7/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVV 66
+F I F ++ +AS ++ + LLSV P I L F + +
Sbjct: 6 LFSFIRFVAARFRQDRCVQIASSLTFTTLLSVVPLITIALTLFSAFPVFGDFSTQIKTYL 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G A + ++ A A L + L + + + + N +RV R
Sbjct: 66 LGNLMPETAGRVITHYMEQFAESAGRLSALGVLFLTVTAMLMMLTIDHAFNIIWRVSRPR 125
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +I + + LA V + + + K P G + +
Sbjct: 126 TLLKRLVIYWAVLTLAPVLVGASLSLTSWLVGLSMGYAKNIPFFGVGM------LKALPV 179
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + +P + L G I + +F +YI F TY +Y A
Sbjct: 180 IFTTLAFAMLFRLVPNRYVPLSHALIGGIVASALFETMNRVFGYYISHFPTYKLVYGAFA 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S+ L+++Y + +LGA + AS+ + + P
Sbjct: 240 SVPIFLMWVYFSWLTILLGAVVAASLPHWRTTEAP 274
>gi|311695820|gb|ADP98693.1| ribonuclease BN [marine bacterium HP15]
Length = 453
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 100/267 (37%), Gaps = 5/267 (1%)
Query: 5 FCIVFDIIYDAI---EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++ + A + A + + LLS+ P + ++ LG HQ +
Sbjct: 29 WTWLYKVGRTAYAMARDVLSGQLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQRMEP 88
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ F + V + L ++ Y + ++ + S N +R
Sbjct: 89 FLFQFFEPLGPQGIDLAEQILGFVDNMKVGVLGSVGLALLVYTVVSLLQKIERSFNMIWR 148
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V +MRS +++ + +V V I + + + + +I
Sbjct: 149 VPDMRSMAQRFSNYLSVIMVGPLLMVSAIGVSATI--FSSTIVQKLIEIEPFGSVILVAS 206
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + FV++F+P + K+ G + +SW +LF ++ + Y+ +
Sbjct: 207 RFTPFFLVVGAFTFVYVFMPNTRVKLRYAAIGGLVAGVSWQAAGMLFASFVAGSAKYAAI 266
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ A + L+++Y+ + +LGA +
Sbjct: 267 YSSFAIGIILLIWIYLNWMILLLGASI 293
>gi|326330668|ref|ZP_08196972.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
gi|325951509|gb|EGD43545.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
Length = 328
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 56/268 (20%), Positives = 117/268 (43%), Gaps = 8/268 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ A + +A+ ++ + L+VFP ++ L G + V +D +
Sbjct: 26 WVQVVKRAWREAKSDQLPLLAAGVAFYSFLAVFPAMIAAVMLYGLVRDPGDVQREVDELS 85
Query: 68 GAWPEVIAKPITDEILQV---LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P A +T ++ + + +S + A + +S GV ++ ++N AY E
Sbjct: 86 QTLPSDAASVLTTQLEAITSTSSGSLGLGLLVSLVLALWSASGGVGSIMSAVNIAYDEEE 145
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + +L+S G + A V +++ + P L + P L R
Sbjct: 146 TRGFVKRKLLSLGLTVAAIVFVIVTISLVAVAPALLDNLVDAGPVRWGLEA----ARWVG 201
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++A+ I L ++ P +++ + G + + W+V +V F+ Y+ F +Y+ Y
Sbjct: 202 LVVAMSIALAVLYKVAPDRDDAELRWVSVGAVVATVLWLVASVGFSLYVDNFGSYNKTYG 261
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
LA ++ L++L++ +LGAE+NA
Sbjct: 262 ALAGVVVLLLWLWLTMYVVLLGAEINAE 289
>gi|192289850|ref|YP_001990455.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|192283599|gb|ACE99979.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 317
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 108/264 (40%), Gaps = 8/264 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ + +A+ + LL++FP I + + + + P
Sbjct: 46 TYRRIGDDRLFLVAAGVVFYWLLALFPAITALVSSYALFADAATIGDHLAQLSSIVPAGT 105
Query: 75 AKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I +++ +VLA L + A + ++ GV+A+ +LN Y V E R ++
Sbjct: 106 YSVIEEQVGRVLANGEAKLGLAFLISLSLALWSANGGVKAIIDALNAVYDVEEQRGFFKL 165
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
S L A ++ + +A P+ LA + + + I GR L F
Sbjct: 166 NGFSLLLTLGALGAVLAAIGLVIAAPIVLARI----GLGNLVAVAIDYGRWPVLALMTFG 221
Query: 192 GLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
GL ++ P + PG I +SW+ G+ ++Y+ F+ Y+ Y L + +
Sbjct: 222 GLSLLYRIAPNRPSPPWRWVAPGSIVAALSWLAGSAALSYYLANFADYNATYGSLGAAIG 281
Query: 251 CLVFLYMLGVFFILGAELNASMII 274
+++++M + + G ELNA +
Sbjct: 282 LMIWMWMTAIVVLAGGELNAEIEA 305
>gi|126736136|ref|ZP_01751879.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
gi|126714302|gb|EBA11170.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
Length = 315
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 114/273 (41%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + E+ +A+ ++ LL++FP I + G L + + + G
Sbjct: 20 DIALRLKDEVSEDRVGLIAAGVAFYGLLALFPAITAILAIGGLLVEPNQIIEQLSALAGI 79
Query: 70 WPEVIAKPITDEILQVLAVP---AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE IT++ V + A Y +S G+ +L +N AY +E R
Sbjct: 80 VPEAAMTIITEQATAVAGSREGGLGLAALLGIGLAIYSASKGMGSLMDGMNVAYDEIEER 139
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L + G LL + L+I +A+P+A+ + + I +
Sbjct: 140 GFIRLKLETLGLTLLLIIGLLIGLSAMIAVPVAINAL----SLGVVTETLGTVVVIAVLL 195
Query: 187 LALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+GL ++ + P+ + ++ PG I W++G+ F Y+ F +Y+ + L
Sbjct: 196 GLTLVGLAVLYRYGPSRDAAEMQWATPGAIAACFLWLLGSAGFAFYVANFGSYNESFGAL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ L++L++ ILGAELNA M
Sbjct: 256 GGVVILLMWLWISAYVIILGAELNAEMEAQTRH 288
>gi|91784445|ref|YP_559651.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|123062706|sp|Q13WE0|Y3061_BURXL RecName: Full=UPF0761 membrane protein Bxeno_A3061
gi|91688399|gb|ABE31599.1| tRNA-processing RNAse BN [Burkholderia xenovorans LB400]
Length = 436
Score = 140 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +LS+ P L F ++
Sbjct: 8 LDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQMSLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ L A AKGL TI + + + + + N +RV
Sbjct: 68 IFLADHLMPAQLNSQIFNYLNQFASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + + + +I
Sbjct: 128 KARPIAQRILVYWAIITLGPILIGVSLSISSYLFTQSMTFTAA----QRMTPVIEWALAG 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A + ++++LP + + + G + I++ + F +Y+ TY+ +Y
Sbjct: 184 AALPLTAAAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + GA + +++
Sbjct: 244 AFAAVPLFLLWMYLCWFITLAGAMIASALPAIR 276
>gi|257126602|ref|YP_003164716.1| ribonuclease BN [Leptotrichia buccalis C-1013-b]
gi|257050541|gb|ACV39725.1| ribonuclease BN [Leptotrichia buccalis C-1013-b]
Length = 523
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 110/273 (40%), Gaps = 6/273 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + IIY ++ + + +A ++ +LL++FP + + G +
Sbjct: 9 IKKRIDEMKRIIYLIYRNYRDGETQILAISLTYYSLLAIFPVVALILGITKGFGLDKLFI 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ ++ I +L+ + L ++ + Y + + L S N+ +
Sbjct: 69 QKFFELWPGNNGILKVIIDVAQRLLLSTESSILTSVGIIILIYSAVKVLIMLENSFNKIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ + RS + + L + V++S + V + FP L+ ++
Sbjct: 129 KINKKRSMTRRVIDYVAIIFLGPIFFVLLSTLNSF---VADEVIRNFPNNPILINLVVGL 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
AT + LF ++ +P KI + + T + +LF + + Y+
Sbjct: 186 LGPATYIILF---SYLFYIIPNTNVKIKPAVFAGVVTTVLTFGWKLLFLLLQSSITKYNI 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y LA I L+++ + V +LGA++ S+
Sbjct: 243 IYGSLALIPIFLIWVQYVWVTILLGAQIAFSIQ 275
>gi|242279976|ref|YP_002992105.1| ribonuclease BN [Desulfovibrio salexigens DSM 2638]
gi|242122870|gb|ACS80566.1| ribonuclease BN [Desulfovibrio salexigens DSM 2638]
Length = 456
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 114/278 (41%), Gaps = 4/278 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + Y F+ + AS ++ + +LS+ PF+ +L +G +
Sbjct: 31 KILHTMARVGYLVTIGFLRDQCIIRASALTFTTMLSIVPFLAVAFSLMKGMGFQD--SSY 88
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I + + + + V + L I + + V + + N ++V
Sbjct: 89 IQEMLLKVSAGREEVVGKILEYVDNTNVQTLGWIGVATLLFTVLSTVGTVEKAFNIIWKV 148
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R+++ F + + V +++ + V V+I V + F ++ + +
Sbjct: 149 SHGRTFWRKFTDFFSVIFICPVAVIVATSVSVSIKK--QAVLQQFGSIYGITELESFLIS 206
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A ++ +++ F++ F+P K +I S L G + W + + ++ + + Y+ +Y
Sbjct: 207 LAPLVLIWLSFTFIYAFMPNTKVRITSALAGGVVAGTVWQMAQWAYINWQIGVTKYNAIY 266
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A + LV+LY V +LG+E++ ++ ++
Sbjct: 267 GSFAQLPLFLVWLYASWVIVLLGSEISYAVQNVMLYRQ 304
>gi|255319771|ref|ZP_05360976.1| tRNA-processing ribonuclease BN [Acinetobacter radioresistens SK82]
gi|255303090|gb|EET82302.1| tRNA-processing ribonuclease BN [Acinetobacter radioresistens SK82]
Length = 434
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 101/273 (36%), Gaps = 4/273 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
F I I F + +A ++ + L ++ P + + + A + +
Sbjct: 33 KTWFKFILFVIRRFEADRCRELAGSLTYTTLFAIVPMLTVFLVIISSIQALEPARQQLQQ 92
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + D++L + L I L + + + + NR +RV E
Sbjct: 93 LIYSNFLPKSTIAFDKMLNAFTEKSSNLTVIGVLFLFVTTIMMLSTIETAFNRIWRVKET 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + + + L + L + A+ F + ++ +
Sbjct: 153 RGGIVGFMRYWTIISLGPIVLGSAFVISSALASLSILSNNFAGYEMDGAFLLS----LLS 208
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ G ++ +P +++ +F+ I + + LF + F++Y +Y
Sbjct: 209 IALTIAGFFIIYWTIPNRNVPMIAAALAGVFSAIVFEMLKNLFGTIMSNFTSYEIVYGAF 268
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A+I L+++Y+ +LG E++ ++ ++ R
Sbjct: 269 AAIPIFLLWIYLSWNIVLLGVEVSFAITAFHSR 301
>gi|226195661|ref|ZP_03791248.1| outer membrane porin [Burkholderia pseudomallei Pakistan 9]
gi|225932146|gb|EEH28146.1| outer membrane porin [Burkholderia pseudomallei Pakistan 9]
Length = 822
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 5/259 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFILGAEL 268
L++LY +LGAE
Sbjct: 261 VLLMWLYFSAAVLLLGAEF 279
>gi|108760431|ref|YP_634071.1| YihY family protein [Myxococcus xanthus DK 1622]
gi|108464311|gb|ABF89496.1| YihY family protein [Myxococcus xanthus DK 1622]
Length = 348
Score = 140 bits (353), Expect = 2e-31, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 116/274 (42%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV 66
+ + F E+ +A+ +S L S+FPF+ F L +L A V ++D +
Sbjct: 11 WREFSRRFVREFQEDSVTDIAAQLSYYLLFSLFPFLFFLVTLVAYLPFAPGAVDAMLDRI 70
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P IT + ++ P L T + + +S GV ALR +LN AY V E R
Sbjct: 71 RPLVPGDAMGLITGHLQSLVNQPQPKLLTAGLVITLWSASRGVNALRTALNLAYDVSESR 130
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ T+ ++ LL S+ + + F+ ++ + L+ R T
Sbjct: 131 PLWKTQGLAMLVTLLGSLLIPLSFAAFLLGGRLGLWLAGKLQLVDAFHLVWSWLRWPFTA 190
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L + LP K + I PG + W+ FT Y+ F Y+ Y +
Sbjct: 191 SLVMLVLALCYYLLPDVKQRFKYITPGSVLGTGLWLTSTWGFTQYVEHFGKYNVTYGSIG 250
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+M L++LY+ G+ FI+G E+NA + K
Sbjct: 251 GVMVLLLWLYLSGLIFIVGGEVNAILEHASVEGK 284
>gi|258406232|ref|YP_003198974.1| ribonuclease BN [Desulfohalobium retbaense DSM 5692]
gi|257798459|gb|ACV69396.1| ribonuclease BN [Desulfohalobium retbaense DSM 5692]
Length = 425
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 101/271 (37%), Gaps = 4/271 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F ++ D + + FV + AS ++ + L++ PF+ +L+ G + I
Sbjct: 14 FRMIRDWVLFVLRAFVRDQCLLRASALTYVSALALVPFLAVAFSLSKGFGFQNTL--YIR 71
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ + + I + + L +I + + + + N + V
Sbjct: 72 TLLERFAAGREQVIEHVLAYINNTDVATLGSIGVGVLFVSVFSMLATVEKTFNTIWGVQR 131
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R LL V ++ + ++ + V + +G + A
Sbjct: 132 PRQLSRKFTDYLSVTLLCPVLVIASISITASLQ--SSAVAQKLLRVGFFNSVYGGLLSLA 189
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ LIF++ +P + + + L G + W L HY + FS Y+ +Y
Sbjct: 190 PFFMAWLALIFIYTVMPNTRVRFLPALGGGLVAGFLWQATQKLLIHYQIGFSKYNAIYGS 249
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIY 275
A + LV++Y+ + + GAE++ ++
Sbjct: 250 FAQVPLLLVWMYLSWIIVLFGAEISFALQNR 280
>gi|89070971|ref|ZP_01158197.1| Ribonuclease BN [Oceanicola granulosus HTCC2516]
gi|89043478|gb|EAR49692.1| Ribonuclease BN [Oceanicola granulosus HTCC2516]
Length = 279
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/247 (21%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ LL++FP I +AG + + + + G P+ A + + +V
Sbjct: 1 MAFYGLLALFPAITAMIAIAGLVMEPAQITEQLQALGGMLPQDAADILIGQAQEVAGSRE 60
Query: 91 KGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
GL + L A Y +S GV +L +N AY + R + ++ L+ V +V
Sbjct: 61 GGLGLAAVLGILLALYSASKGVSSLMEGINVAYDEEDQRGFIKRTALTLALTLVLIVGIV 120
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SK 206
+ V +P L V ++I R ++ G ++ F P ++
Sbjct: 121 LGLASTVVLPAVLNVVD----LGPVTEILIAAFRWALLLVLAVGGFALLYRFAPDRSSAR 176
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ + PG I I W+V V F Y F +Y+ + L ++ L++L++ ++GA
Sbjct: 177 MKWLTPGAIVGCILWIVATVGFAIYADNFGSYNESFGALGGVIVLLMWLWLSSYAVLMGA 236
Query: 267 ELNASMI 273
E+N+ +
Sbjct: 237 EINSEIE 243
>gi|83644372|ref|YP_432807.1| ribonuclease BN-like family protein [Hahella chejuensis KCTC 2396]
gi|83632415|gb|ABC28382.1| ribonuclease BN-like family protein [Hahella chejuensis KCTC 2396]
Length = 455
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 101/266 (37%), Gaps = 2/266 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+++ + + A + + LLS+ P + ++ G H + +
Sbjct: 31 RVLWHSARVLFAVVRDVLFGHVTLHAMGLVYTTLLSIVPLLALSFSVLKGFGVHNQLEPL 90
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ VF A+ E + + + + V V L ++ Y + V+ + S N +RV
Sbjct: 91 LENVFQAFGEKGPELVQNVLAFVDNVKVGVLGSVGLGLLIYTVISLVQKVERSFNEIWRV 150
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++RS +++ + + + + ++ +
Sbjct: 151 SQIRSLAQRFSSYLSVIVVGPLLAFSAMGATATL--VGTDMAQTVLSIEPFGRLFSLATR 208
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A + + F++ F+P K + G + I+W +F ++V S Y +Y
Sbjct: 209 MAPYVIIVALFTFMYRFIPNTKVRTRYAFIGGLGAGIAWQTTGYVFAKFVVGTSNYEAIY 268
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
+G A + L++LY+ + ++GA +
Sbjct: 269 SGFAVGILVLIWLYISWLILLMGASV 294
>gi|167828963|ref|ZP_02460434.1| outer membrane porin [Burkholderia pseudomallei 9]
Length = 819
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 5/259 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 199 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 257
Query: 250 TCLVFLYMLGVFFILGAEL 268
L++LY +LGAE
Sbjct: 258 VLLMWLYFSAAVLLLGAEF 276
>gi|260907006|ref|ZP_05915328.1| putative ribonuclease BN [Brevibacterium linens BL2]
Length = 312
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/268 (20%), Positives = 112/268 (41%), Gaps = 2/268 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ + I H + + G +A+ ++ ALLS+ P + ++ G +G + + +
Sbjct: 42 ILTNTIRHVISDQGLDLAAGLAFYALLSMAPATLALVSMLGVVGEAKSTTEAVLGLTSDL 101
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A+ I + ++++ PA GL +S A + SS V A + NRAY V E R +
Sbjct: 102 STEAAQAIRPIVTELVSSPAAGLTLIVSVAVAIWSSSKYVGAFGRAANRAYAVEETRPLW 161
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + L+ + + + + V + K ++I R + +
Sbjct: 162 KLKPMMLLITLVLLLLMAGLGLLLVVSGPIAESIGKLVGLGPVAVMIWSIARWPVVIFFV 221
Query: 190 FIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ P K K G ++ +V ++ F YI F Y+ Y + +
Sbjct: 222 MLAIALLYYATPNVKKVKFRWSSIGAFVAPMTLIVVSLGFVLYINNFDNYNATYGAIGGV 281
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +L+M+ + I G+EL+A +
Sbjct: 282 IVGFAWLWMVNLALIFGSELDAEIRRSR 309
>gi|296158116|ref|ZP_06840948.1| ribonuclease BN [Burkholderia sp. Ch1-1]
gi|295891452|gb|EFG71238.1| ribonuclease BN [Burkholderia sp. Ch1-1]
Length = 439
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 95/273 (34%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +LS+ P L F ++
Sbjct: 11 LDTLKRLAQFAAQRSSEDRIPQVAGSLTFTTMLSLVPLATVAFALFTAFPIFASFQMSLQ 70
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ L A AKGL TI + + + + + N +RV
Sbjct: 71 IFLADHLMPAQLNSQIFNYLNQFASKAKGLTTIGMIFLFVTAVMTMMTVESAFNVIWRVR 130
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + + + +I
Sbjct: 131 KARPIAQRILVYWAIITLGPILIGVSLSISSYLFTQSMTFTAA----QRMTPVIEWALAG 186
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A + ++++LP + + + G + I++ + F +Y+ TY+ +Y
Sbjct: 187 AALPLTAAAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRIPTYTAVYG 246
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + GA + +++
Sbjct: 247 AFAAVPLFLLWMYLCWFITLAGAMIASALPAIR 279
>gi|289207949|ref|YP_003460015.1| ribonuclease BN [Thioalkalivibrio sp. K90mix]
gi|288943580|gb|ADC71279.1| ribonuclease BN [Thioalkalivibrio sp. K90mix]
Length = 452
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 97/265 (36%), Gaps = 2/265 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + E A + + LLS+ P I ++ GAH V
Sbjct: 33 KALLLGIVRGAGAIMHEAKEGQLTLRAMSLVYTTLLSIVPLIALSFSVLKAFGAHNAVEP 92
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ E + + I V + L + L Y V+ + ++ N +R
Sbjct: 93 VVLGFLEPLGEQGVEIANNVIEFVDNMRVGVLGFVGLLFLVYTVIALVQKIELAFNTIWR 152
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R++ +L+ + +++S + + + + + +I
Sbjct: 153 VENSRNFAQRFSNYLSVILIGPL--LVVSALGITATVMSTTAMQTLAGIEPFGTLITGAS 210
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + F+++F+P + ++ L G + + W F + + Y +
Sbjct: 211 RMVPYLLIMAAFTFIYVFVPNTRVRLFPALVGAVVAGLLWQSVGWGFATMVAGSTRYDAI 270
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
Y+G A ++ L+++Y+ + ++GA
Sbjct: 271 YSGFAIMILLLIWIYLAWLILLIGA 295
>gi|115372473|ref|ZP_01459781.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|310819113|ref|YP_003951471.1| ribonuclease bn-related protein [Stigmatella aurantiaca DW4/3-1]
gi|115370435|gb|EAU69362.1| ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
gi|309392185|gb|ADO69644.1| Ribonuclease BN-related protein [Stigmatella aurantiaca DW4/3-1]
Length = 307
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 124/271 (45%), Gaps = 6/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ + + A+ ++ +LS+FPF++F LAG + + V +I +
Sbjct: 35 DILGNLRREWKRNKLSDAAAALTFYGVLSLFPFLLFIVALAGLVIQPEQVQALIGELGRE 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P ++ + ++ Q+ + P+ GL T SALAA + ++ GV +L +LN AY V E R +
Sbjct: 95 VPPAFSQIPSAQLAQLTSGPSTGLLTFSALAAVWSAAAGVVSLMTALNTAYGVTESRPRW 154
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
Y + + L +A +A+A + ++ R+ L +
Sbjct: 155 K------VYGIALGMMLGGALLALLAGLVAVAAPALATRLGQPWMALVGWLRLPLAALLM 208
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ LP + K I PG + + W+ ++ F+ Y+ FST+ Y L I+
Sbjct: 209 MSLWATLYSVLPDVRQKFKFITPGSVAGVLVWLAASLGFSFYVSHFSTFGITYGALGGII 268
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + +LGAE+NA + K
Sbjct: 269 VLLLWMWISSLALMLGAEINAVLARRSSEGK 299
>gi|238027745|ref|YP_002911976.1| YihY family protein [Burkholderia glumae BGR1]
gi|237876939|gb|ACR29272.1| YihY family protein [Burkholderia glumae BGR1]
Length = 434
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 33/273 (12%), Positives = 96/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A E+ +A ++ + +L++ P + L F ++
Sbjct: 8 LDTIKRLARFAARRGGEDRIPQVAGSLTFTTILALVPLVTVAFALFTAFPIFSSFQASLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L + AKGL T + + + + + N +RV
Sbjct: 68 SFLADHLMPAQINNQIFKYLNQFSAKAKGLTTAGLIVLVVTAVMTMMTIESAFNVIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L + ++ L + + + + + ++ +
Sbjct: 128 KPRPFAQRVLAYWAFITLGPLLFGVSLSISSYLFTKSLAFAGAPATPSSFEWLLTAASLP 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+ + ++++LP + G + +++ + F +Y+ TY+ +Y
Sbjct: 188 LTV----VAFTLLYVYLPNCTVAWRDAVVGGVCAALAFELAKRGFGYYVRRIPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + + GA + +++
Sbjct: 244 AFAAVPLFLLWVYLSWLITLAGAMIASALPAIR 276
>gi|328956776|ref|YP_004374162.1| putative integral inner membrane protein with ribonuclease fold
[Carnobacterium sp. 17-4]
gi|328673100|gb|AEB29146.1| putative integral inner membrane protein with ribonuclease fold
[Carnobacterium sp. 17-4]
Length = 331
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 62/276 (22%), Positives = 121/276 (43%), Gaps = 3/276 (1%)
Query: 5 FCIVFDIIYDAIE-HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F F + + ++ + A A+ ++ LLS+FP ++ AN+ ++
Sbjct: 13 FKDKFKHFLEVFKPNWARAEVSANAAQLAYFTLLSLFPILLVVANVIPLFPIDAA--DIL 70
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+V A P I + + L+ + G +I + + + +S AL+ LN Y V
Sbjct: 71 PMVETAVPPDIYNVLAPILENYLSSSSGGAISIGLITSLWSASKAFNALQDVLNEVYGVE 130
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ ++ I RL+SF L + ++ FVFV L ++ F +L+L +++ +
Sbjct: 131 KRNNFIIVRLVSFLVQLAIVAIVGVVIFVFVFGEFILLFLEDFVGIELDLVLQVFSYKWL 190
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L + + V+ +P + I LPG +F I W+V + FT Y+ + A
Sbjct: 191 VLFIVLILIITMVYFLVPNHRMHIKYALPGAVFATIGWMVLSQAFTLYVQFAGGEAAASA 250
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +++LY+ + +LGA +NA K
Sbjct: 251 TFGVFIVLMLWLYLSAIILLLGALINAVYFEIKIGK 286
>gi|108763366|ref|YP_632756.1| YihY family protein [Myxococcus xanthus DK 1622]
gi|108467246|gb|ABF92431.1| YihY family protein [Myxococcus xanthus DK 1622]
Length = 359
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 56/268 (20%), Positives = 116/268 (43%), Gaps = 7/268 (2%)
Query: 9 FDIIYDAIE-HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + A++ + ++ +A ++ +L++FPF++F +LAG L +I +
Sbjct: 10 WKTFFLALKDEWTRDEVGDVAGALTFRMILALFPFLLFLVSLAGLLIEPAQAQVLIQELA 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + +++ I + GL T+ + A + +S GV AL +LN+ Y V E R
Sbjct: 70 RVAPREVTSILSERIEALANSRPVGLLTVGGVGAVWAASAGVVALMTALNKVYGVTESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R I+ L + ++ +F + P+ + ++ R+ L
Sbjct: 130 IWKLRGIALLVTLGGAAVAILAAFAVIVTPVIAGKLPGGLG------TVLMWLRLPVAGL 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ LP K I PG + + WV + F+ Y+ F Y Y +
Sbjct: 184 LMMFLWAVLYYVLPDVNQKFRFITPGSVVGVLIWVFASWGFSQYVANFGKYDVNYGAIGG 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
++ L+++++ +LGAE+NA +
Sbjct: 244 VIVMLLWMWISAQVILLGAEINAILEHR 271
>gi|303246520|ref|ZP_07332799.1| ribonuclease BN [Desulfovibrio fructosovorans JJ]
gi|302492230|gb|EFL52105.1| ribonuclease BN [Desulfovibrio fructosovorans JJ]
Length = 448
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/264 (16%), Positives = 100/264 (37%), Gaps = 4/264 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F++ G ++A+ +S + +LS+ PF+ ++A LG + + +
Sbjct: 39 FFHVLHLFLKNHGLSLAAALSYTTVLSIVPFLAVAFSVAKGLGFYD--SPQVHDLLMRIT 96
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + L + K L I + + + V + ++N A+ + R +
Sbjct: 97 AGRAEVVEQIQLYIQNTNVKTLGAIGTVLLLVTAVSLVSTIEGAINAAWDIGVKRGFVTR 156
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+++ L A+ A + + + + A +L ++
Sbjct: 157 FTSYLLLIIICPPLLFAAVSAMAAVQDAS--LTRRLLEFSLVQDVERIVLSVAPVLIVWT 214
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ FLP + K L G W + + + + Y+ +Y A I
Sbjct: 215 VFFVLYQFLPNTRVKPRCALIGAFCAGTLWQLVQWAYIKFQFGAAGYNAIYGSFAQIPLL 274
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
L++LY+ +LGA+++ + Y
Sbjct: 275 LLWLYISWAIVLLGAQISHTAQRY 298
>gi|261211303|ref|ZP_05925592.1| ribonuclease BN [Vibrio sp. RC341]
gi|260839804|gb|EEX66415.1| ribonuclease BN [Vibrio sp. RC341]
Length = 309
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 85/267 (31%), Gaps = 6/267 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + A +++ LLS+ P + ++ VI
Sbjct: 16 LHFFRYLLSRMNHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSIFASAGEVIQDFVI 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A + L + + + + + +LN +RV + R
Sbjct: 76 THFVPAAGEVVKTALVEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQQKRRA 135
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + + + L + + I L + +
Sbjct: 136 VFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNETLSGAYNLFLRWLPFVL 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 190 SYCAFVGLYLLVPNKKVHLQHAMTGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAI 249
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + ++GAE+ A++
Sbjct: 250 PILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|197333895|ref|YP_002154869.1| tRNA-processing ribonuclease BN [Vibrio fischeri MJ11]
gi|197315385|gb|ACH64832.1| tRNA-processing ribonuclease BN [Vibrio fischeri MJ11]
Length = 316
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 100/276 (36%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FV 59
++ I + + + + + A +++ LLS+ P I ++
Sbjct: 11 IKHKLRIGWSYLLFLKQRVIHDRLTVSAGYMAYITLLSLVPLITVLLSVLSQFPVFSGAG 70
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
TV V + + + + + ++ + + + S + ++ SLN
Sbjct: 71 DTVQAFVIQNFVPAASDAVEASLKEFISN-TGKMTAVGSGFLFVASVMLISSIDRSLNYI 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + + L + + + +
Sbjct: 130 WRVKKKRRPMYSFSLYWMILTLGPLLVGASLAATSYVTSL------KIMDDEIVSSFYRT 183
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ F + ++L +P K ++ L G + + V F YI F +Y
Sbjct: 184 LLGWLPIILSFSAFVGLYLLVPNKKVRVTHALIGAMSAGCLFEFSKVGFAQYITQFPSYQ 243
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA++ V++Y+ + ++GAE+ AS+ +
Sbjct: 244 VIYGALAAVPILFVWVYLCWIIVLIGAEITASLGEF 279
>gi|194364494|ref|YP_002027104.1| ribonuclease BN/unknown domain fusion protein [Stenotrophomonas
maltophilia R551-3]
gi|226737460|sp|B4SKS3|Y716_STRM5 RecName: Full=UPF0761 membrane protein Smal_0716
gi|194347298|gb|ACF50421.1| ribonuclease BN [Stenotrophomonas maltophilia R551-3]
Length = 424
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 96/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + + + D VF +
Sbjct: 25 RFLWHRFLDDRLFQAAAALAYTTVFALVPLAIVVFGVLSAFPVFDRWSDQLSDYVFSNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + Q + A L +A + ++ + N+ +RV R
Sbjct: 85 PNAARAAEGYLRQF-SASAGQLTAAGFIALVVSLLITLNSVEETFNQIWRVGSTRPKLTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L+ + + L ++ ++ + A +L F+
Sbjct: 144 FLVYWTVLTLG------AMLAAASLAVSARVFAMPLFGTQEGRWLADLALRLAPILIEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + +P K +PG I + + Y+ +F +Y +Y +A +
Sbjct: 198 CITLMFRVVPHHTVKWRHAVPGAILAAVILELVKWGIGAYLGSFQSYQKLYGTVAFVPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L++SM + +
Sbjct: 258 LLWIYLCWVAVLLGASLSSSMAAFRY 283
>gi|84501469|ref|ZP_00999674.1| Ribonuclease BN family protein [Oceanicola batsensis HTCC2597]
gi|84390760|gb|EAQ03248.1| Ribonuclease BN family protein [Oceanicola batsensis HTCC2597]
Length = 315
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 106/266 (39%), Gaps = 8/266 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI+ + + + ++ LL++FP I LAG V I+ +
Sbjct: 24 DILLRVWAEMGRDHIGLIGAGVAFYGLLALFPAITALMALAGLTFDASQVTAQIESISQF 83
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE A I D+ + V GL + A + +S GV +L +N AY E R
Sbjct: 84 VPEAAADIIIDQAVAVTGSQDGGLGLAAILGFALAIWAASKGVGSLMEGINIAYDETETR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L G L +V + +P L+ + L+I R A +
Sbjct: 144 GFVRLTLTRLGLTLFLVFGMVAGLGATIVLPSILSLIN----LGATTELLIGLARWIALL 199
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
G+ ++ P K + ++PG + + W+ + F Y+ F +Y + L
Sbjct: 200 AMTVAGITVLYRVAPDRKDATWSWLVPGAVLATLLWIGASAAFAIYVQNFGSYQETFGTL 259
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ L++L++ +LGAELNA
Sbjct: 260 AGVVILLMWLWISAYVILLGAELNAE 285
>gi|77165113|ref|YP_343638.1| ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|254433289|ref|ZP_05046797.1| Ribonuclease BN-like family [Nitrosococcus oceani AFC27]
gi|76883427|gb|ABA58108.1| tRNA-processing RNAse BN [Nitrosococcus oceani ATCC 19707]
gi|207089622|gb|EDZ66893.1| Ribonuclease BN-like family [Nitrosococcus oceani AFC27]
Length = 447
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 102/267 (38%), Gaps = 2/267 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +IY F + D A+ + + LLS+ P + ++ G H +
Sbjct: 28 RTFLRHKAKLIYAVSGEFFKGDLTLQATSLVYTTLLSLAPLLAVSFSVLKAFGIHNEIEP 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+ + T I V + L ++ Y + ++ + + N +R
Sbjct: 88 VLHHFLLPLGPRGEEITTKIIQYVENLKVGVLGSVGVGLLFYTVLSLIQKVEGAFNHVWR 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + +L+ V + ++ + L +
Sbjct: 148 IKAERPFVRRFSDYLSVLLIGPVLVFSAVGATASVMQTS--FIQTLLEFELLGKTLVVVS 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + G FV+LFLP K K+ S + G + I W +LF ++ T + Y +
Sbjct: 206 KLLPYLLVIGGFTFVYLFLPNTKVKLGSAVVGGVVAGILWESIGILFAFFVATSTKYDAI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y+ LA ++ +++LY+ + ++GA++
Sbjct: 266 YSSLAILILFMIWLYISWLILLVGAQV 292
>gi|58038914|ref|YP_190878.1| t-RNA-processing ribonuclease BN [Gluconobacter oxydans 621H]
gi|58001328|gb|AAW60222.1| t-RNA-processing ribonuclease BN [Gluconobacter oxydans 621H]
Length = 348
Score = 140 bits (352), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/284 (21%), Positives = 116/284 (40%), Gaps = 17/284 (5%)
Query: 9 FDII-YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ +I A+ + A LS+FP I +L G Q V ++V+
Sbjct: 51 WRVIAKHLFAEVGSSQTSLSAAGCAFYATLSLFPAISSLISLYGLAFDLQTVEPQLEVLR 110
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P I D I ++++ P L S A + +S +++ +LN AY E
Sbjct: 111 HLLPPSAYDLIGDRIHELISQPHSSLTIGLIFSLAIALWSASASTKSILSALNMAYNAQE 170
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN------------ 172
RS+ + I+ L A + + + VA P + Y+ + L +
Sbjct: 171 TRSFLKFQAIALSTTLTAILGAALTLALMVAAPALVDYLPRHVSFLSDPPFPVDLLLSYG 230
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHY 231
+++ +L +FI + ++ F P ++ I PG I WV+ ++ F+ Y
Sbjct: 231 APMVVHTLAPLLMLLFVFIAVTLLYRFAPCRVHTQWRWIFPGSALATILWVITSLGFSWY 290
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ F++Y Y L ++ +++ ++ + GAELNAS+
Sbjct: 291 VAHFASYGATYGPLGAVAAIMMWFFVSAYVVLFGAELNASLEAR 334
>gi|329770330|ref|ZP_08261713.1| hypothetical protein HMPREF0433_01477 [Gemella sanguinis M325]
gi|328836688|gb|EGF86344.1| hypothetical protein HMPREF0433_01477 [Gemella sanguinis M325]
Length = 301
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 128/274 (46%), Gaps = 3/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + ++ +++++S +LS+FP ++ L + Q ++D +
Sbjct: 21 FKKFCKEMYYRIMYDEISLLSANLSYYFILSLFPMLIVAMALTPYFNIDQKF--LLDKIQ 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I I +VL + L T+ + + +SNG+ + I+ N A+RV + R
Sbjct: 79 SFAPGELGDFIFGMISEVLNSKSNNTLITLGIVFTLWSASNGIYGIIIAFNNAFRVRDGR 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W +T+L+S + +L V + ++ + V + F +
Sbjct: 139 IWIVTKLMSILFTVLFLVGMFLVLALVVFGKQLTYLLFHKFNLDEGFYNGWSYLSYSFPI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L FI +F+++F P + K +SILPG +F+ ISW + + LF +YI FS+Y Y +
Sbjct: 199 LFTFIVFVFLYIFGPNLRLKAISILPGAVFSTISWTLVSRLFGYYIDHFSSYIKTYGTIG 258
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ M +++LY+ G ILGAE+NA Y +
Sbjct: 259 AFMAFIMWLYITGFILILGAEINAIFHNYRVEHR 292
>gi|209696335|ref|YP_002264266.1| ribonuclease BN [Aliivibrio salmonicida LFI1238]
gi|226736667|sp|B6EGQ7|Y2938_ALISL RecName: Full=UPF0761 membrane protein VSAL_I2938
gi|208010289|emb|CAQ80622.1| tRNA-processing ribonuclease BN [Aliivibrio salmonicida LFI1238]
Length = 310
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 99/274 (36%), Gaps = 8/274 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVP 60
+ I + + + + A +++ LLS+ P + ++
Sbjct: 6 KYSLRISWSYFLFLKQRIIHDRLTVSAGYMAYITLLSLVPLVTVLLSVLSQFPIFSGAGE 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV + V + + + + + ++ + + + S + A+ SLN +
Sbjct: 66 TVQEFVIQNFVPAASDAVEGSLKEFISN-TGKMTAVGSGFLFVASVMLISAIDRSLNYIW 124
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + + +
Sbjct: 125 RVKKKRRPMYSFSLYWMILTLGPLLVWASLAATSYVTSL------NIMDDEIVSSFYRTL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ F + ++L +P K ++ L G + + V V F YI F +Y
Sbjct: 179 LGWLPIILSFSAFLGLYLLVPNKKIRVRHALVGAMSAGCLFEVSKVGFAQYITQFPSYEV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA++ V++Y+ + ++GAE+ AS+
Sbjct: 239 IYGALAAVPILFVWIYLCWIIVLIGAEITASLGE 272
>gi|296135831|ref|YP_003643073.1| ribonuclease BN [Thiomonas intermedia K12]
gi|295795953|gb|ADG30743.1| ribonuclease BN [Thiomonas intermedia K12]
Length = 421
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 102/273 (37%), Gaps = 9/273 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DV 65
+ + F +++ A ++ + L+S+ P + + A + I +
Sbjct: 10 LLASLRTLARRFAQDNLAQTAGSLTFTTLISLVPLLTVVLAVFTAFPAFDRMQGQIQAHL 69
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ I+ + + A AK L +S + +++ + + +LN +R
Sbjct: 70 AQTMLPDGISDKVYHYLSDF-AAKAKSLGVVSVVFLIVTATSMMLTVDRALNAIWRTPRP 128
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS L+ + L + L + + A + P + +A+
Sbjct: 129 RSLAQRVLLYWAGFTLGPLVLGASIGLMSFVAGAHRGLLHHLPGGASA------LLSFAS 182
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + L + F+P + + L G +++ +G Y T +TY+ +Y
Sbjct: 183 WAVMAVALAALFRFIPNTEVRWRDALIGGFVAALAFSLGGRALAWYFSTVTTYTAVYGTF 242
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L+++Y + ++GA + A + R
Sbjct: 243 AALPLLLLWIYFSWIAVLVGAMIAAYLPSLRVR 275
>gi|168212796|ref|ZP_02638421.1| YihY family protein [Clostridium perfringens CPE str. F4969]
gi|170715733|gb|EDT27915.1| YihY family protein [Clostridium perfringens CPE str. F4969]
Length = 283
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F L GF +
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGFSHLNS--DA 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 VLNLLSNVMPTEAFNLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKETRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFMKVLEHPELIYYIWNILR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMILFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|307730419|ref|YP_003907643.1| ribonuclease BN [Burkholderia sp. CCGE1003]
gi|307584954|gb|ADN58352.1| ribonuclease BN [Burkholderia sp. CCGE1003]
Length = 436
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 96/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P L F ++
Sbjct: 8 LDTLKRLAQFAAKRSSEDRIPQVAGSLTFTTMLALVPLATVAFALFTAFPLFSSFQESLQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL TI + + + + N +RV
Sbjct: 68 FFLADHLMPAQLNSQIFKYLNQFAAKAKGLTTIGMVLLFLTGVMTMMTIESAFNVIWRVR 127
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + + F A + +I
Sbjct: 128 KARPVAQRILVYWAIITLGPILIGVSLSISSYLFTQSM----TFSAAQRMTPVIEWALAG 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + ++++LP + + + G + I++ + F +Y+ TY+ +Y
Sbjct: 184 TALPLTALAFTILYVYLPNCRVEWRDAVIGGVTAAIAFELAKRGFGYYVRRMPTYTAVYG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + L+++Y+ + GA + +++
Sbjct: 244 AFSVVPLFLLWMYLCWFITLAGAMIASALPAIR 276
>gi|169344091|ref|ZP_02865077.1| YihY family protein [Clostridium perfringens C str. JGS1495]
gi|169297826|gb|EDS79923.1| YihY family protein [Clostridium perfringens C str. JGS1495]
Length = 283
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F L GF +
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGFSHLNS--DA 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 VLNLLSNVMPTEAFNLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKENRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFMKVLEHPEFIYYIWNMLR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMILFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|82701586|ref|YP_411152.1| ribonuclease BN, putative [Nitrosospira multiformis ATCC 25196]
gi|123545059|sp|Q2YBW1|Y452_NITMU RecName: Full=UPF0761 membrane protein Nmul_A0452
gi|82409651|gb|ABB73760.1| tRNA-processing RNAse BN [Nitrosospira multiformis ATCC 25196]
Length = 426
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 104/271 (38%), Gaps = 7/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFG 68
D ++ + F + + +A ++ + LLS+ P + G ++ A +F + + +
Sbjct: 22 DFMHYVLVRFFQHNCTQIAGSLTFTTLLSLVPMLAIGLSVIAAFPAFAEFSDRIKEFILT 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A + +Q A A L I + + + +LN +RV +R
Sbjct: 82 TMVPEAANKVISVYMQQFADNAAKLTAIGIAFLGVTALALMLTIDEALNSIWRVSRLRPL 141
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
LI + + + + + + + A + P + + ++
Sbjct: 142 LHRLLIYWSVLTIGPLLIGASLSLTSWLMTASRGFTRDIPGGDIM------LLRLSPLVL 195
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I +L +P + + G + I + + F YI F TY +Y A+I
Sbjct: 196 TSIAFSASYLIVPNRQVAWRHAIAGGVAAAIGFEIMKEGFAFYITRFPTYQAVYGTFATI 255
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ + +LGA + AS+ + +R+
Sbjct: 256 PIFLLWLYLSWLMVLLGAVIAASLSSWRFRE 286
>gi|220918325|ref|YP_002493629.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956179|gb|ACL66563.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
Length = 338
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 6/273 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ +A+ ++ +L++FPF++F LA + ++ +
Sbjct: 10 WREFGKGLYHELDHDNVTDLAATVTYYGVLALFPFLLFLVALASVVITPAQAQQLVHQLA 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + K + D I Q+ A L AL A + +S AL SLN AY V E R
Sbjct: 70 QVAPGEVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMRSLNTAYDVGESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ R I+ ++A V ++ + VA + I R+ L
Sbjct: 130 FWKVRAIALLMTVVAGVLALVGALAAVATEPLANAIGGRAG------AAILWLRLPVAAL 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ LP + + I PG +F + WV+ + F Y+ F Y Y +A
Sbjct: 184 VMMFLWALLYYVLPDVEQRFKFITPGSVFGVVLWVLASWGFGKYVANFGHYDKTYGSIAG 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ L ++++ + ++GAE+NA + K
Sbjct: 244 VIVLLFWMWLSALVLLVGAEINALIEHRSPEGK 276
>gi|197123527|ref|YP_002135478.1| ribonuclease BN [Anaeromyxobacter sp. K]
gi|196173376|gb|ACG74349.1| ribonuclease BN [Anaeromyxobacter sp. K]
Length = 338
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 112/273 (41%), Gaps = 6/273 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ +A+ ++ +L++FPF++F LA + ++ +
Sbjct: 10 WREFGKGLYHELDHDNVTDLAATVTYYGVLALFPFLLFLVALASVVITPAQAQQLVHQLA 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + K + D I Q+ A L AL A + +S AL SLN AY V E R
Sbjct: 70 QVAPGEVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMRSLNTAYDVGESRP 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ R I+ ++A V ++ + VA + I R+ L
Sbjct: 130 FWKVRAIALLMTVVAGVLALVGALAAVATEPLANAIGGRAG------AAILWLRLPVAAL 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ LP + + I PG +F + WV+ + F Y+ F Y Y +A
Sbjct: 184 VMMFLWALLYYVLPDVEQRFKFITPGSVFGVVLWVLASWGFGKYVANFGHYDKTYGSIAG 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ L ++++ + ++GAE+NA + K
Sbjct: 244 VIVLLFWMWLSALVLLVGAEINALIEHRSPEGK 276
>gi|153828362|ref|ZP_01981029.1| YihY family protein [Vibrio cholerae 623-39]
gi|148876192|gb|EDL74327.1| YihY family protein [Vibrio cholerae 623-39]
Length = 309
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 90/275 (32%), Gaps = 6/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + + + + A +++ LLS+ P + ++
Sbjct: 8 MKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI A + L + + + + + +LN +
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + I L +
Sbjct: 128 RVQQKRRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGVYNLF 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 182 LRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQL 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 242 IYGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|127514473|ref|YP_001095670.1| ribonuclease BN [Shewanella loihica PV-4]
gi|126639768|gb|ABO25411.1| tRNA-processing RNAse BN [Shewanella loihica PV-4]
Length = 285
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 102/264 (38%), Gaps = 8/264 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIA 75
+ E+ A H++ LLS+ P + ++ + + + I+ ++ +
Sbjct: 6 QRITEDQINMRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIRSHIETFIYENFIPSAG 65
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I + +A +KG + A + + + SLN +R E R ++ +
Sbjct: 66 DSVQMYINEFVANASKG-TAVGIGALVVVAILLISNIDKSLNGIWRTTEKRPMVVSFSMY 124
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ + L V + + + +L ++ M +
Sbjct: 125 WMVLTLGPVLMGASLVATSYVVSLKLFSG------TDLSGVVPLLVERLPMFFSVATFLL 178
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+++ +P K K L G I + + +G F Y+ F Y +Y LA+I +++
Sbjct: 179 IYMVVPNTKVKFFHALLGAIVAALLFELGKKGFALYLTEFPAYEAIYGALATIPILFMWV 238
Query: 256 YMLGVFFILGAELNASMIIYYWRK 279
Y+ + ++GAE+ A+M Y ++
Sbjct: 239 YLSWIIVLIGAEITAAMPEYLDKR 262
>gi|153212589|ref|ZP_01948336.1| YihY family protein [Vibrio cholerae 1587]
gi|124116460|gb|EAY35280.1| YihY family protein [Vibrio cholerae 1587]
Length = 309
Score = 139 bits (351), Expect = 4e-31, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 89/275 (32%), Gaps = 6/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + + + + A +++ LLS+ P + ++
Sbjct: 8 MKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI A + L + + + + + +LN +
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + I L
Sbjct: 128 RVQQKRRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNETLSGAYNLF 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 182 LRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQL 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 242 IYGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|288559219|sp|B5FFD1|Y098_VIBFM RecName: Full=UPF0761 membrane protein VFMJ11_0098
Length = 310
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 100/276 (36%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FV 59
++ I + + + + + A +++ LLS+ P I ++
Sbjct: 5 IKHKLRIGWSYLLFLKQRVIHDRLTVSAGYMAYITLLSLVPLITVLLSVLSQFPVFSGAG 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
TV V + + + + + ++ + + + S + ++ SLN
Sbjct: 65 DTVQAFVIQNFVPAASDAVEASLKEFISN-TGKMTAVGSGFLFVASVMLISSIDRSLNYI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + + L + + + +
Sbjct: 124 WRVKKKRRPMYSFSLYWMILTLGPLLVGASLAATSYVTSL------KIMDDEIVSSFYRT 177
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ F + ++L +P K ++ L G + + V F YI F +Y
Sbjct: 178 LLGWLPIILSFSAFVGLYLLVPNKKVRVTHALIGAMSAGCLFEFSKVGFAQYITQFPSYQ 237
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA++ V++Y+ + ++GAE+ AS+ +
Sbjct: 238 VIYGALAAVPILFVWVYLCWIIVLIGAEITASLGEF 273
>gi|190572909|ref|YP_001970754.1| ribonuclease BN/unknown domain fusion protein [Stenotrophomonas
maltophilia K279a]
gi|226737461|sp|B2FQ10|Y865_STRMK RecName: Full=UPF0761 membrane protein Smlt0865
gi|190010831|emb|CAQ44440.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
Length = 424
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 96/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + + + D VF +
Sbjct: 25 RFLWHRFLDDRLFQAAAALAYTTVFALVPLAIVVFGVLSAFPVFDRWSDQLSDYVFSNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + Q + A L +A + ++ + N+ +RV R
Sbjct: 85 PNAARAAEGYLRQF-SASAGQLTAAGFIALVVSLLITLNSVEETFNQIWRVGSTRPKLTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L+ + + L ++ ++ + A +L F+
Sbjct: 144 FLVYWTVLTLG------AMLAAASLAVSARVFAMPLFGTQEGRWLAELALRLAPILIEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + +P K +PG I + + Y+ +F +Y +Y +A +
Sbjct: 198 CITLMFRVVPHHTVKWRHAVPGAILAAVILELVKWGIGAYLGSFQSYQKLYGTVAFVPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L++SM + +
Sbjct: 258 LLWIYLCWVAVLLGASLSSSMAAFRY 283
>gi|59710707|ref|YP_203483.1| ribonuclease BN [Vibrio fischeri ES114]
gi|67460602|sp|Q5E8Q1|Y100_VIBF1 RecName: Full=UPF0761 membrane protein VF_0100
gi|59478808|gb|AAW84595.1| predicted inner membrane protein [Vibrio fischeri ES114]
Length = 310
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 100/276 (36%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FV 59
++ I + + + + + A +++ LLS+ P I ++
Sbjct: 5 IKHKLRIGWSYLLFLKQRVIHDRLTVSAGYMAYITLLSLVPLITVLLSVLSQFPVFSGAG 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
TV V + + + + + ++ + + + S + ++ SLN
Sbjct: 65 ETVQAFVIQNFVPAASDAVEASLKEFISN-TGKMTAVGSGFLFVASVMLISSIDRSLNYI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV + R + + + + L + + + +
Sbjct: 124 WRVKKKRRPMYSFSLYWMILTLGPLLVGASLAATSYVTSL------KIMDDEIVSSFYRT 177
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ F + ++L +P K ++ L G + + V F YI F +Y
Sbjct: 178 LLGWLPIILSFSAFVGLYLLVPNKKVRVTHALIGAMSAGCLFEFSKVGFAQYITQFPSYQ 237
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA++ V++Y+ + ++GAE+ AS+ +
Sbjct: 238 VIYGALAAVPILFVWVYLCWIIVLIGAEITASLGEF 273
>gi|225573600|ref|ZP_03782355.1| hypothetical protein RUMHYD_01794 [Blautia hydrogenotrophica DSM
10507]
gi|225039039|gb|EEG49285.1| hypothetical protein RUMHYD_01794 [Blautia hydrogenotrophica DSM
10507]
Length = 323
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ V + I ++ A A+ + +LS PF++F L +
Sbjct: 1 MKKKLGPVLSSLSGFIRRTQKDHVGAYAAQAAYFIILSFIPFMLFLMTLVQYTPL--TYN 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + P I + + +V + + + ++ + A + + G++AL LN Y
Sbjct: 59 AVRSAIVSFLPREIQSFVLGIVAEVFS-KSGAVLPVTLVTAIWSAGKGIQALTNGLNTIY 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E R+W TRL S Y +L L+ + V + ++ P LG ++
Sbjct: 118 HVKETRNWLTTRLWSMLYTVLFVFALIGSLILLVFGNSIQQTLMRYVPFLGEMVARFLGA 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + L + +F++ LP ++ + S +PG + T I+W V + F+ Y F +S
Sbjct: 178 KNFLVFIVLVLLFLFLYKALPNRRASLKSQVPGAVLTAIAWSVFSFGFSIYFTFFPNFSN 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
MY L +I+ ++++Y+ + GAE+NA
Sbjct: 238 MYGSLTTIILIMLWMYICMNIVLFGAEINAYYE 270
>gi|260890637|ref|ZP_05901900.1| ribonuclease BN [Leptotrichia hofstadii F0254]
gi|260859682|gb|EEX74182.1| ribonuclease BN [Leptotrichia hofstadii F0254]
Length = 521
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 108/272 (39%), Gaps = 6/272 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + +IY ++ + + +A ++ +LL++FP + + G +
Sbjct: 20 KKKMSEIKRMIYLIYRNYRDGETQILAISLTYYSLLAIFPVVALVLGITKGFGLDKIFIQ 79
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + +L+ + L + + Y + + L S N+ ++
Sbjct: 80 KFFELWPGNNSFLRVIVDVAQRLLLSTESSILTGVGIVILIYSAVKVLITLENSFNKIWK 139
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + RS + + L + V++S + +A+ + K F ++ +
Sbjct: 140 INKKRSITRRVVDYIAIIFLGPIFFVLLSALNS---VAVEEIAKHFSENAVIMNLFIGLF 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
AT + LF ++ +P KI + I T + +LF + + Y+ +
Sbjct: 197 GPATYIILF---SYLFYIIPNTNVKIKPAVYAGIVTTLLTFGWKLLFLLLQSSITRYNII 253
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y LA I L+++ + V +LGA++ S+
Sbjct: 254 YGSLALIPIFLIWVQYVWVTILLGAQIAFSIQ 285
>gi|294339996|emb|CAZ88359.1| putative Ribonuclease BN transmembrane protein [Thiomonas sp. 3As]
Length = 419
Score = 139 bits (350), Expect = 4e-31, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 102/273 (37%), Gaps = 9/273 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DV 65
+ + F +++ A ++ + L+S+ P + + A + I +
Sbjct: 10 LLASLRTLARRFAQDNLAQTAGSLTFTTLISLVPLLTVVLAVFTAFPAFDRMQGQIQAHL 69
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P+ I+ + + A AK L +S + +++ + + +LN +R
Sbjct: 70 AQTMLPDGISDKVYHYLSDF-AAKAKSLGVVSVVFLIVTATSMMLTVDRALNAIWRTPRP 128
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS L+ + L + L + + A + P + +A+
Sbjct: 129 RSLAQRVLLYWAGFTLGPLVLGASIGLMSFVAGAHRGLLHHLPGGASA------LLSFAS 182
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + L + F+P + + L G +++ +G Y T +TY+ +Y
Sbjct: 183 WAVMAVALAALFRFIPNTEVRWRDALIGGFVAALAFSLGGRALAWYFSTVTTYTAVYGTF 242
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L+++Y + ++GA + A + R
Sbjct: 243 AALPLLLLWIYFSWIAVLVGAMIAAYLPSLRVR 275
>gi|163795887|ref|ZP_02189851.1| probable ribonuclease [alpha proteobacterium BAL199]
gi|159178920|gb|EDP63456.1| probable ribonuclease [alpha proteobacterium BAL199]
Length = 443
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 96/271 (35%), Gaps = 3/271 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A+ F + G A+ ++ + LL++ P + + A Q V I+++
Sbjct: 9 VLYAVRRFYRDGGLQAAAALTYTTLLALVPLMTIAFAIFSAFPAFQAVQYQIELLLFQNL 68
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + A L T+ +A A + + + NR +RV R
Sbjct: 69 VPEVGSIIQSHISEFTRNATNLTTVGVVALAVSAVLLLSTVESVFNRIWRVERERPILTR 128
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNGRIYATMLA 188
LI + + L V + + + + L + L G
Sbjct: 129 LLIFWTVLTLGPVLMGASFTLTTGVFDWIGQFANESVGLAPISLEGDRWVIGGRLLAAAL 188
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + +PA ++ G ++ + +F Y+V F +Y +Y LA++
Sbjct: 189 QATAFTILFVLVPARPVRLRDAAVGGAIAGVALEILKWVFRLYVVGFPSYQAIYGALAAV 248
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY+ I+GA AS + +
Sbjct: 249 PIFLIWLYLSWTVIIMGAVFAASFSEWRSAR 279
>gi|119899455|ref|YP_934668.1| exoribonuclease II [Azoarcus sp. BH72]
gi|288559235|sp|A1KAC6|Y3165_AZOSB RecName: Full=UPF0761 membrane protein azo3165
gi|119671868|emb|CAL95782.1| exoribonuclease II [Azoarcus sp. BH72]
Length = 408
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 98/272 (36%), Gaps = 7/272 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFG 68
D + E F +A ++ + LL++ P + + G L + ++ D +
Sbjct: 8 DFLRLLGERFSATRCPQVAGSLAFTTLLALVPLLTVAIGVFGNLPGMDKLGASLKDFLLE 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A I + A L I A + + + N+ + V R
Sbjct: 68 NLLPDRAGRIITTYALQFSQKAARLTLIGTAMLAVTALMLLATIERVFNQIWGVRHRRPL 127
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +S+ + L V L + A P +G + L
Sbjct: 128 LMRITVSWFMLTLGPVILGGSVVATGYLVSTSAEWSDRLPWIGEIAAAT------LPPLL 181
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L F++ +P +++ L G + + +++ +I F TY+ +Y A++
Sbjct: 182 LGALFSFLYYAVPNHPVRLLHALAGGLCAALVFLLMQRGLGLFIAGFPTYTLIYGTFAAL 241
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++LY+ +LGA + A++ + R++
Sbjct: 242 PIFLLWLYLSWTVILLGALITATLPAFLERQR 273
>gi|254523442|ref|ZP_05135497.1| tRNA-processing ribonuclease BN [Stenotrophomonas sp. SKA14]
gi|219721033|gb|EED39558.1| tRNA-processing ribonuclease BN [Stenotrophomonas sp. SKA14]
Length = 414
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 96/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + + + D VF +
Sbjct: 15 RFLWHRFLDDRLFQAAAALAYTTVFALVPLAIVVFGVLSAFPVFDRWSDQLSDYVFSNFV 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + Q + A L +A + ++ + N+ +RV R
Sbjct: 75 PNAARAAEGYLRQF-SASAGQLTAAGFIALVVSLLITLNSVEETFNQIWRVGSTRPKLTR 133
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L+ + + L ++ ++ + A +L F+
Sbjct: 134 FLVYWTVLTLG------AMLAAASLAVSARVFAMPLFGTQEGRWLAELALRLAPILIEFV 187
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + +P K +PG I + + Y+ +F +Y +Y +A +
Sbjct: 188 CITLMFRVVPHHTVKWRHAVPGAILAAVILELVKWGIGAYLGSFQSYQKLYGTVAFVPIL 247
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L++SM + +
Sbjct: 248 LLWIYLCWVAVLLGASLSSSMAAFRY 273
>gi|168216626|ref|ZP_02642251.1| YihY family protein [Clostridium perfringens NCTC 8239]
gi|182626819|ref|ZP_02954556.1| YihY family protein [Clostridium perfringens D str. JGS1721]
gi|177907828|gb|EDT70428.1| YihY family protein [Clostridium perfringens D str. JGS1721]
gi|182381516|gb|EDT78995.1| YihY family protein [Clostridium perfringens NCTC 8239]
Length = 283
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F L GF +
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGFSHLNS--DA 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 VLNLLSNVMPTEAFNLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKETRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFMKVLEHPEFIYYIWNILR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMILFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|86159452|ref|YP_466237.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775963|gb|ABC82800.1| ribonuclease BN, putative [Anaeromyxobacter dehalogenans 2CP-C]
Length = 338
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 6/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + ++ +A+ ++ +L++FPF++F LA + ++ +
Sbjct: 12 EFGKGLYQELGHDNVTDLAATVTYYGVLALFPFLLFLVALASVVITPAQAQALVHQLAQV 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + K + D I Q+ A L AL A + +S AL SLN AY V E R ++
Sbjct: 72 APGEVTKIVGDRIQQLGAQQNVTLLGFGALGALWAASGATLALMRSLNTAYDVKESRPFW 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R I+ ++A V + + VA + I R+ L +
Sbjct: 132 KVRAIALLMTVVAGVLALAGAVAAVATEPIANAIGGSAG------AAILWLRLPFAALVM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ LP + + I PG +F + WV+ + F Y+ F Y Y +A ++
Sbjct: 186 MSLWALLYYVLPDVEQQFKFITPGSVFGVVLWVLASWGFGKYVANFGHYDKTYGSIAGVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L ++++ + ++GAE+NA + K
Sbjct: 246 VLLFWMWISSLVLLVGAEINALIEHRSPEGK 276
>gi|18309267|ref|NP_561201.1| YihY family protein [Clostridium perfringens str. 13]
gi|110799841|ref|YP_694741.1| YihY family protein [Clostridium perfringens ATCC 13124]
gi|168207453|ref|ZP_02633458.1| YihY family protein [Clostridium perfringens E str. JGS1987]
gi|168210398|ref|ZP_02636023.1| YihY family protein [Clostridium perfringens B str. ATCC 3626]
gi|18143943|dbj|BAB79991.1| conserved hypothetical protein [Clostridium perfringens str. 13]
gi|110674488|gb|ABG83475.1| YihY family protein [Clostridium perfringens ATCC 13124]
gi|170661202|gb|EDT13885.1| YihY family protein [Clostridium perfringens E str. JGS1987]
gi|170711461|gb|EDT23643.1| YihY family protein [Clostridium perfringens B str. ATCC 3626]
Length = 283
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + I+ ++D +A+ + ++ +LS PF++F L GF +
Sbjct: 6 KGFLRKTVIFLVMFIKKIGDDDIFALGAQLAYYMVLSFIPFLMFLMTLVGFSHLNS--DA 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++++ P I +++++ GL IS A + SS+G +A+ LN+AY
Sbjct: 64 VLNLLSNVMPTEAFNLIQSTVIEIVDREQTGLLWISIALAIWVSSSGFKAVIKGLNKAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E RS+ +LIS Y +L ++ ++ F+FV + + K + I R
Sbjct: 124 VKETRSYIKLKLISMIYTILLALIVIATLFLFVFGDVIGDFFMKVLEHPEFIYYIWNMLR 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + + +F++ P + + ++PG + T + W+ + +F +Y+ FS YS +
Sbjct: 184 YVVVILIMILFFMFLYNATPCVRLGWLEVIPGAVITTLGWISISYIFAYYVNNFSNYSRL 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L ++ + ++++ + ILG E+NA + K
Sbjct: 244 YGSLGAVFMFMTWMFITSMILILGGEINAVLAEKNRLK 281
>gi|37678387|ref|NP_932996.1| ribonuclease BN [Vibrio vulnificus YJ016]
gi|37197126|dbj|BAC92967.1| ribonuclease BN [Vibrio vulnificus YJ016]
Length = 317
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 95/270 (35%), Gaps = 8/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
+ I + A +++ LLS+ P + ++ + V +V+ +
Sbjct: 26 FVRYLIARMNHDRINVNAGYLAYITLLSIVPMLTVLLSILSKFSVFENVGSVLQSFIINN 85
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +A + + A + + + +LN +RV + R
Sbjct: 86 FVPASGDAVHAALQEFIAN-TGKMTAVGAAFLFVAALMLISNIDKNLNYIWRVKKKRRAV 144
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + I + + + +
Sbjct: 145 FSFSMYWMVLTLGPILVGASIAATSYITSL------RLLDSEAISTVYDQLLRWLPFILS 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 199 SSAFVGLYLLVPNKKVQFSHAVVGAMIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIP 258
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y+ + ++GAE+ A++ +
Sbjct: 259 ILFVWVYLCWLIVLIGAEVTAALGEREHWR 288
>gi|159900436|ref|YP_001546683.1| putative ribonuclease BN [Herpetosiphon aurantiacus ATCC 23779]
gi|159893475|gb|ABX06555.1| putative ribonuclease BN [Herpetosiphon aurantiacus ATCC 23779]
Length = 360
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 95/274 (34%), Gaps = 3/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVV 66
+ ++ + + ++ + + ++ + S+ P ++ ++AG V +
Sbjct: 5 IINLFKQTFKEWGDDKVPRLGAALAYYTVFSLAPLLIIAISIAGLVFDQEAARGEVTRQL 64
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ A+ I + I Q + + T I + +S L+ ++N + V
Sbjct: 65 ATLINDDAAQAINEIIQQSSNQRSGIIGTLIGVATLLFGASGVFGQLKDAMNTIWGVQPK 124
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
I ++ + V V + I L K + + ++ + +
Sbjct: 125 PRRGIWGIVQERFFSFTMVLGVGFLLLVSLIISTLLEAGKNWLFGAEIGIVFQIINLIVS 184
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + FLP K + G T + + +G Y+ T S+ ++ +
Sbjct: 185 FGIITVVFALLFKFLPDVKMAWRDVWIGAALTALLFTIGKFAIGQYLST-SSTASTFGAA 243
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ L+++Y GAEL Y
Sbjct: 244 GSLIIVLLWVYYSSQILFFGAELTQVYANMYGSH 277
>gi|166710796|ref|ZP_02242003.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzicola BLS256]
Length = 425
Score = 139 bits (350), Expect = 5e-31, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFTNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRY 283
>gi|328542071|ref|YP_004302180.1| ribonuclease rnase bn (Rbn) transmembrane protein [polymorphum
gilvum SL003B-26A1]
gi|326411821|gb|ADZ68884.1| Putative ribonuclease rnase bn (Rbn) transmembrane protein
[Polymorphum gilvum SL003B-26A1]
Length = 291
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 118/280 (42%), Positives = 174/280 (62%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + I + ++ DA+ HF +DGWAMASH++LS+LL++FP ++F A LAGFLG
Sbjct: 3 LSKRLVIGYRVLGDALGHFNRDDGWAMASHVALSSLLALFPLLIFIAALAGFLGLTGTAA 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V +++F AWPE +A P+ +EI +VL VP L T +AA +F+SNGVEA+R++LNRAY
Sbjct: 63 RVSELIFEAWPEQVAAPVANEIKKVLTVPRGDLLTFGVVAALWFASNGVEAVRVALNRAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV++ R + + RL S VLL S+ L+ +F+ V PLALA +FP L + I
Sbjct: 123 RVIDTRPFVLLRLQSILLVLLCSIGLIAFTFLMVLAPLALAAAHAWFPWLADFAGRINAV 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A L GLI VH LPA + + + ILPGV T W+ F Y+ ++ Y +
Sbjct: 183 RYGAASLVAVAGLIVVHAVLPAGRRRFVDILPGVAATLALWLAAGAAFGAYLAGYADYVS 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLA +M+ LVFLY++ + ++G ELNA++I ++
Sbjct: 243 TYAGLAGVMSALVFLYIVALALLIGGELNAALIRQRDLRR 282
>gi|77463212|ref|YP_352716.1| ribonuclease BN family protein [Rhodobacter sphaeroides 2.4.1]
gi|77387630|gb|ABA78815.1| Ribonuclease BN family protein [Rhodobacter sphaeroides 2.4.1]
Length = 373
Score = 139 bits (349), Expect = 5e-31, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 120/273 (43%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + + + G
Sbjct: 79 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPALAAFVSLYGLFADPAVIAEQAESLRGV 138
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+++ + + + L +S L A + +++G++AL ++N A+ E R
Sbjct: 139 IPAEGLDLLTEQLRTLASGESSSLTFSFVLSFLIAFWSANSGMKALIEAMNIAHEEREKR 198
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A V V M + + V F ++W R +
Sbjct: 199 SFVKLTLLSFALTLGAMVLAVTM----IVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLL 254
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ + + G + W++ ++ FT Y+ F+ YS Y L
Sbjct: 255 LLVATAMAGLYRWAPSRNAPEWRWVTWGSGIATLVWLIASIAFTIYLENFANYSATYGSL 314
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ L+++++ + I+GAE+N+ M R
Sbjct: 315 GALVGLLLWVWIAVMILIVGAEVNSEMEHQTAR 347
>gi|126665845|ref|ZP_01736826.1| ribonuclease BN-like family protein [Marinobacter sp. ELB17]
gi|126629779|gb|EBA00396.1| ribonuclease BN-like family protein [Marinobacter sp. ELB17]
Length = 441
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 100/264 (37%), Gaps = 2/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+Y I F+ A + + LLS+ P + ++ LG HQ + + F
Sbjct: 37 RSLYALIRDFISGQLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQKMEPFLYQFFQP 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + V + L ++ Y + V+ + S N +RV EMRS
Sbjct: 97 LGPQGIEIAERILGFVDNMKVGVLGSVGLAVLVYTVVSLVQKIERSFNMIWRVPEMRSLA 156
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++ + +V + I + + + +I + +
Sbjct: 157 QRFSNYLSVIMVGPLLMVSAIGISATI--FSSSFVQTLIEIEPFGSVILLVSRFTPFFLV 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FV++F+P + K+ + +SW +LF ++ + Y+ +Y+ A +
Sbjct: 215 VGAFTFVYVFIPNTRVKLRYAFLAGLIAGVSWQGAGMLFASFVAGSAKYAAIYSSFAIGI 274
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L+++Y+ + +LGA L+ +
Sbjct: 275 IMLIWIYLNWMILLLGASLSFYLQ 298
>gi|16762407|ref|NP_458024.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. CT18]
gi|29143895|ref|NP_807237.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62182487|ref|YP_218904.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|168232952|ref|ZP_02658010.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168237643|ref|ZP_02662701.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168244229|ref|ZP_02669161.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168263083|ref|ZP_02685056.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467359|ref|ZP_02701196.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168821635|ref|ZP_02833635.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194444515|ref|YP_002043245.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194450742|ref|YP_002048026.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194470662|ref|ZP_03076646.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194734561|ref|YP_002116947.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197249949|ref|YP_002148947.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Agona
str. SL483]
gi|198245131|ref|YP_002217947.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|200387726|ref|ZP_03214338.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204930339|ref|ZP_03221316.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205354393|ref|YP_002228194.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207859217|ref|YP_002245868.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213161529|ref|ZP_03347239.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E00-7866]
gi|213426072|ref|ZP_03358822.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E02-1180]
gi|213620640|ref|ZP_03373423.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-2068]
gi|213647342|ref|ZP_03377395.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. J185]
gi|213852982|ref|ZP_03382514.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. M223]
gi|238912170|ref|ZP_04656007.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289828504|ref|ZP_06546358.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-3139]
gi|32699644|sp|Q8Z2T8|YIHY_SALTI RecName: Full=UPF0761 membrane protein yihY
gi|75479427|sp|Q57HI9|YIHY_SALCH RecName: Full=UPF0761 membrane protein yihY
gi|226737451|sp|B5EZZ9|YIHY_SALA4 RecName: Full=UPF0761 membrane protein yihY
gi|226737452|sp|B5FP16|YIHY_SALDC RecName: Full=UPF0761 membrane protein yihY
gi|226737453|sp|B5QWW1|YIHY_SALEP RecName: Full=UPF0761 membrane protein yihY
gi|226737454|sp|B5RFE6|YIHY_SALG2 RecName: Full=UPF0761 membrane protein yihY
gi|226737455|sp|B4TBV9|YIHY_SALHS RecName: Full=UPF0761 membrane protein yihY
gi|226737456|sp|B4SZW9|YIHY_SALNS RecName: Full=UPF0761 membrane protein yihY
gi|226737457|sp|B4TPN7|YIHY_SALSV RecName: Full=UPF0761 membrane protein yihY
gi|25512569|pir||AE0947 ribonuclease BN (EC 3.1.-.-) [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16504711|emb|CAD09599.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi]
gi|29139531|gb|AAO71097.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. Ty2]
gi|62130120|gb|AAX67823.1| tRNA processing exoribonuclease BN [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|194403178|gb|ACF63400.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194409046|gb|ACF69265.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457026|gb|EDX45865.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194710063|gb|ACF89284.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195630178|gb|EDX48818.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213652|gb|ACH51049.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197289415|gb|EDY28780.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197939647|gb|ACH76980.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199604824|gb|EDZ03369.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320743|gb|EDZ05945.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205274174|emb|CAR39189.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205332809|gb|EDZ19573.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205336891|gb|EDZ23655.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205341886|gb|EDZ28650.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205348123|gb|EDZ34754.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206711020|emb|CAR35389.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|320088432|emb|CBY98191.1| tRNA processing exoribonuclease BN [Salmonella enterica subsp.
enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322613091|gb|EFY10041.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619162|gb|EFY16045.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322626028|gb|EFY22840.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626513|gb|EFY23319.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632375|gb|EFY29123.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635144|gb|EFY31865.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322642654|gb|EFY39244.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322647943|gb|EFY44415.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650693|gb|EFY47094.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322652876|gb|EFY49213.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657191|gb|EFY53471.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662322|gb|EFY58537.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322666857|gb|EFY63033.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322672127|gb|EFY68242.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675849|gb|EFY71921.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322681736|gb|EFY77762.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684070|gb|EFY80079.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322716982|gb|EFZ08553.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323193342|gb|EFZ78557.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323197699|gb|EFZ82832.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323200728|gb|EFZ85799.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323207268|gb|EFZ92220.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211470|gb|EFZ96311.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323218485|gb|EGA03193.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221033|gb|EGA05465.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226009|gb|EGA10228.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323231689|gb|EGA15801.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323236063|gb|EGA20141.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239516|gb|EGA23565.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243891|gb|EGA27902.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249253|gb|EGA33170.1| hypothetical protein SEEM9199_02097 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250504|gb|EGA34387.1| hypothetical protein SEEM8282_08567 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258958|gb|EGA42610.1| hypothetical protein SEEM8283_01652 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260203|gb|EGA43826.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323265322|gb|EGA48819.1| hypothetical protein SEEM8285_17387 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270544|gb|EGA53990.1| hypothetical protein SEEM8287_12923 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326625738|gb|EGE32083.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 290
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + +L +I N
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L +I ++ +P + L G + + G F YI F +Y +
Sbjct: 182 RILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 242 YGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|301020240|ref|ZP_07184360.1| YihY family protein [Escherichia coli MS 196-1]
gi|299881873|gb|EFI90084.1| YihY family protein [Escherichia coli MS 196-1]
Length = 290
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSL--------HWASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|209522505|ref|ZP_03271096.1| ribonuclease BN [Burkholderia sp. H160]
gi|209497059|gb|EDZ97323.1| ribonuclease BN [Burkholderia sp. H160]
Length = 437
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 36/273 (13%), Positives = 97/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P L F ++
Sbjct: 9 LDTLKRLAQFAAQRIGEDRIPQVAGSLTFTTMLALVPLATVAFALFTAFPIFSSFQASLQ 68
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL TI + + + + + N +RV
Sbjct: 69 FFLADHLMPARLNDQIFKYLNQFASKAKGLTTIGMIVLFLTAVMTMMTVESAFNVIWRVR 128
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + + + + + +
Sbjct: 129 KARPVAQRILVYWAIITLGPILIGVSLSISSYLFTQSMSYSAAQRITPLIAWALASATLP 188
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+L ++++LP + + G + +++ + F +Y+ TY+ +Y
Sbjct: 189 LTVL----AFTILYVYLPNCRVAWRDAVVGGVIAAVAFELSKRGFGYYVRQIPTYTAVYG 244
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++Y+ + GA + +++
Sbjct: 245 AFAAVPLFLLWMYLCWFITLTGAMIASALPAIR 277
>gi|21230334|ref|NP_636251.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769672|ref|YP_244434.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. 8004]
gi|32699642|sp|Q8PC75|Y860_XANCP RecName: Full=UPF0761 membrane protein XCC0860
gi|81175005|sp|Q4URA9|Y3370_XANC8 RecName: Full=UPF0761 membrane protein XC_3370
gi|21111886|gb|AAM40175.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575004|gb|AAY50414.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
Length = 425
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHAVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRY 283
>gi|260220892|emb|CBA28912.1| hypothetical protein Csp_A09510 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 418
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 96/275 (34%), Gaps = 10/275 (3%)
Query: 1 MREYFCIVFDIIYDAIE-HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+R+ I + + F E+ AS ++ + +++ P I +
Sbjct: 21 LRDIASIPWRDAAITLRERFREDRLGLTASSLTFTTTIALVPLITVALAVFTAFPMFAKF 80
Query: 60 PTVI--DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
V+ ++ P+ IA+ + + Q A A L + + + +LN
Sbjct: 81 QDVLQKWLIESLVPDNIARQVLGYLNQF-AGKASRLGVAGLTILLGTALALIFTIDRTLN 139
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+RV + R + LI + V L + L + A +G L +
Sbjct: 140 SIWRVKKRRPFGQRVLIYWAAVTLGPLLLGASLSITSYAITASKG------VVGGLPGGL 193
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + G + ++P + G +F + Y+ T
Sbjct: 194 TLLLDSLQFVLVAAGTAAMFHYVPNTHVRWGHAWMGGLFVSTGMELARKGLALYLSKVPT 253
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
YS +Y A++ L+++Y+ V +LGA L A +
Sbjct: 254 YSAVYGAFATVPILLIWIYIAWVIVLLGAALTAYL 288
>gi|256828407|ref|YP_003157135.1| ribonuclease BN [Desulfomicrobium baculatum DSM 4028]
gi|256577583|gb|ACU88719.1| ribonuclease BN [Desulfomicrobium baculatum DSM 4028]
Length = 460
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 47/265 (17%), Positives = 98/265 (36%), Gaps = 1/265 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + + A F G AS ++ LLS+ P +A G Q + +
Sbjct: 32 FVIRLLRTLLFATRDFQNRQGSLQASALTFYTLLSLVPLAAMAFGIAKGFGLEQLLEKEL 91
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
F A EV+ + I + + I + + + + + NR + V
Sbjct: 92 LRNFAAQQEVVLQVIAFARNMLDNTKGGLIAGIGVIILFWSVIKVLGRIEQNFNRIWAV- 150
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
RS +L+A + L++ V I + + G L + G +
Sbjct: 151 PSRSMSRRLSDYLAIMLIAPLLLILSGSATVFIASQVRAISNQVGMPGMLDPAVSLGLGF 210
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A L L+ ++L +P + + L I ++ + V + + + ++Y+ +Y
Sbjct: 211 APYLLLWALFTLLYLIMPNTRVQFAGALLAGILAGSAYQLLQVSYIAFQINVASYNAIYG 270
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + + GAE+
Sbjct: 271 SFAALPLFLIWLQLSWHIVLFGAEI 295
>gi|167551491|ref|ZP_02345246.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205323791|gb|EDZ11630.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
Length = 290
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + +L +I N
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L +I ++ +P + L G + + G F YI F +Y +
Sbjct: 182 RILPLLLSWISFWLLYSIVPTTRVPNRDALIGAFVAALLFEAGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 242 YGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|39931647|sp|Q7MQ07|Y203_VIBVY RecName: Full=UPF0761 membrane protein VV0203
Length = 313
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 95/270 (35%), Gaps = 8/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
+ I + A +++ LLS+ P + ++ + V +V+ +
Sbjct: 22 FVRYLIARMNHDRINVNAGYLAYITLLSIVPMLTVLLSILSKFSVFENVGSVLQSFIINN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +A + + A + + + +LN +RV + R
Sbjct: 82 FVPASGDAVHAALQEFIAN-TGKMTAVGAAFLFVAALMLISNIDKNLNYIWRVKKKRRAV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + I + + + +
Sbjct: 141 FSFSMYWMVLTLGPILVGASIAATSYITSL------RLLDSEAISTVYDQLLRWLPFILS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 195 SSAFVGLYLLVPNKKVQFSHAVVGAMIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y+ + ++GAE+ A++ +
Sbjct: 255 ILFVWVYLCWLIVLIGAEVTAALGEREHWR 284
>gi|15893776|ref|NP_347125.1| tRNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|15023345|gb|AAK78465.1|AE007563_5 TRNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|325507899|gb|ADZ19535.1| TRNA-processing ribonuclease BN [Clostridium acetobutylicum EA
2018]
Length = 283
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 123/281 (43%), Gaps = 3/281 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + + I+ +++ A++S ++ S + + FPF++F L GF
Sbjct: 1 MSAKLLRIKNYVSVFIKRLIDDGIIALSSQLAYSLIFAFFPFLIFLMTLVGFSSIKS--S 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V++ + P + + + + +V+ L ++S + + + +G A+ LN +Y
Sbjct: 59 DVLEAMRKVVPYQVYGLVKNIVKEVVDTKNGKLLSVSLITSIWSCVSGFNAVIRGLNNSY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW-N 179
+ E RS+ +LIS + +T+ + V + + K F +W
Sbjct: 119 KDNERRSFLKVQLISIIFTFGLIITIFFAMLLIVFGDINEELIIKKFGINEFFGYGVWDL 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + ++ + PA K K + PG + + + WV+ ++ FT+Y+ F YS
Sbjct: 179 IKYGILTIGMIFSFAALYRYTPANKHKWKMVFPGAVISALGWVISSICFTYYVNNFGNYS 238
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y + +++ + +L+++ I G E+NA K
Sbjct: 239 KVYGSIGAVIVLMTWLFIISFIIICGGEINAVYFEIKNPNK 279
>gi|78046524|ref|YP_362699.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|325929450|ref|ZP_08190578.1| tRNA-processing RNAse BN [Xanthomonas perforans 91-118]
gi|123730411|sp|Q3BX14|Y968_XANC5 RecName: Full=UPF0761 membrane protein XCV0968
gi|78034954|emb|CAJ22599.1| ribonuclease BN [Xanthomonas campestris pv. vesicatoria str. 85-10]
gi|325540225|gb|EGD11839.1| tRNA-processing RNAse BN [Xanthomonas perforans 91-118]
Length = 425
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRY 283
>gi|332534549|ref|ZP_08410385.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
gi|332036039|gb|EGI72517.1| ribonuclease BN [Pseudoalteromonas haloplanktis ANT/505]
Length = 301
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 45/259 (17%), Positives = 95/259 (36%), Gaps = 8/259 (3%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVI 74
+++ A +++ LLS+ P I G + + + +F +
Sbjct: 27 FNRCIDDQITVNAGYLAYVTLLSLVPLIAVGVAIFSAFPGFESTRMEIESFLFTNFVPTS 86
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
I + I + + + A + + + +LNR +R+ + R I+ +
Sbjct: 87 TDVIREHISSFAGNANQ-MTAVGIGFLAAIALLLIRNVDATLNRIWRIKKKRPMMISFAV 145
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L V L V I +++ + P +G I
Sbjct: 146 YWMVLSLGPVLLGASIGVTSYIVSLVSFADQGIPGFSGF------LLKLLPYGISMVGFI 199
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P + + +PG F + + + F YI F +Y +Y +A+I V+
Sbjct: 200 MLYTLVPNTRVSFRAAIPGAFFAALLFELTKKGFALYISHFPSYEVIYGAVATIPILFVW 259
Query: 255 LYMLGVFFILGAELNASMI 273
+Y+ V +LGAE A +
Sbjct: 260 VYLSWVVVLLGAEFTACIS 278
>gi|188992885|ref|YP_001904895.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. campestris str. B100]
gi|226737462|sp|B0RUB3|Y3490_XANCB RecName: Full=UPF0761 membrane protein xcc-b100_3490
gi|167734645|emb|CAP52855.1| Ribonuclease BN,probable [Xanthomonas campestris pv. campestris]
Length = 425
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHAVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRY 283
>gi|262370530|ref|ZP_06063855.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262314330|gb|EEY95372.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 416
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 99/280 (35%), Gaps = 4/280 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYEKTWFQFVLFVLRRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + D+ L + L I L + + ++ NR +
Sbjct: 69 QQLQQLIYSNFLPKTTIAFDKALNAFTDKSSNLTIIGILFLFVTTVMMLTSIEKVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R I + + + L + L + + F N ++
Sbjct: 129 RVRETRGGIIGFMRYWTIISLGPILLGSAFVISSTMASLNVLSNNFAGYELNGAFVL--- 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +G ++ +P I S L +F+ + + + LF + F++Y
Sbjct: 186 -WLISFCLTVLGFFILNWTIPNRSVPIKSALIAGLFSAVVFELLKNLFGFIMSNFTSYEV 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A+I L+++++ ++G E++ ++ + K+
Sbjct: 245 VYGAFAAIPIFLLWIFLSWNIVLIGVEISYALTAFTSHKE 284
>gi|161505480|ref|YP_001572592.1| ribonuclease BN [Salmonella enterica subsp. arizonae serovar
62:z4,z23:-- str. RSK2980]
gi|189039570|sp|A9MIA4|YIHY_SALAR RecName: Full=UPF0761 membrane protein yihY
gi|160866827|gb|ABX23450.1| hypothetical protein SARI_03639 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 290
Score = 139 bits (349), Expect = 6e-31, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + +L +I N
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L +I ++ +P + + G + + G F YI F +Y +
Sbjct: 182 RVLPLLLSWISFWLLYSIVPTTRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 242 YGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|239631810|ref|ZP_04674841.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|239526275|gb|EEQ65276.1| ribonuclease BN [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 308
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 66/269 (24%), Positives = 121/269 (44%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ AI E + A+ ++ LLS+FP I+F AN + G + + A
Sbjct: 15 FVKLAINRITESNIGQSAAALAYYTLLSLFPLILFVANALPYFGL--TYKGLAAYLTQAI 72
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I +L + GL I A+A + +S GV L++ N+ Y V +++ I
Sbjct: 73 PSNVMNWLDPVIANLLDSSSGGLLGIGAVATLWAASLGVNGLKMGFNQIYGVESSQNFII 132
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL+S + + + VF L ++ + L R T+ ALF
Sbjct: 133 QRLLSMLMTFTLIIVMGAILIVFAFGRQFLEWLIPLLRLNDDWLRTFNTLRWPVTITALF 192
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++F++ FLP K ++ ++LPG FT W++ A F+ Y+ F T Y + + +
Sbjct: 193 VIIMFLNYFLPNVKIRMWTVLPGTAFTVAGWLLIAQAFSLYMKYFGTRYLSYGTIGTFIA 252
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++L + + GA +NA Y+ +
Sbjct: 253 IMLWLNFSALVLLWGAVINALTAEYFIGR 281
>gi|124007383|ref|ZP_01692090.1| ribonuclease BN [Microscilla marina ATCC 23134]
gi|123987216|gb|EAY26956.1| ribonuclease BN [Microscilla marina ATCC 23134]
Length = 370
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 65/296 (21%), Positives = 124/296 (41%), Gaps = 25/296 (8%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-------- 53
+ + + II + ++ A I+ S LS+FP I+F L F
Sbjct: 28 KHHQVSWYRIIKTLWLNINDKPLHQQARAIAFSFTLSLFPAIIFLFTLIPFFVPYIVTYI 87
Query: 54 -------GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS 106
+ ++ P I K D I+ +L P L + L A Y ++
Sbjct: 88 PDIVTTGQDIDMKQQIDALLLEFMPGEIYKYTHDTIVNILTQPRTNLLSFGVLLALYTAT 147
Query: 107 NGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
NGV + + NR Y+ E R++ RL++ G +L + LVI+ V V A+ +V ++
Sbjct: 148 NGVIEMMDTFNRNYKFAEKRNFLRKRLLAAGLAILFAFILVIVVIVLVVTEFAVEFVLEY 207
Query: 167 FPALGNLL----------LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
+ ++ +++ A +G+ ++ PA K + G I
Sbjct: 208 LYEWTSWAMLHKDQVLGYYLLTGFKVFVLFSAFLLGIALIYNLAPARKKEWRFFSLGAIS 267
Query: 217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
I ++ F+ Y+ F+ Y+ +Y + +++ + +LY++ F+LG E+N SM
Sbjct: 268 ASILAMLSTTGFSFYLSNFANYNKLYGSIGTLIALMFWLYLIAWVFLLGFEINVSM 323
>gi|288940217|ref|YP_003442457.1| ribonuclease BN [Allochromatium vinosum DSM 180]
gi|288895589|gb|ADC61425.1| ribonuclease BN [Allochromatium vinosum DSM 180]
Length = 439
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 39/256 (15%), Positives = 99/256 (38%), Gaps = 2/256 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ + + A + + LLS+ P + ++ G H + ++
Sbjct: 35 RLVHAVARDLTQGNLTLYAMSLVYTTLLSLVPLLAVSFSVLKGFGVHNQIEPLLANALEP 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
E + I V + L + Y + ++ + S N +RV E+R +
Sbjct: 95 LGESGVEITQQLIGFVDRMQVGVLGALGVGMLFYTVVSLIQKIEQSFNHVWRVDEVRPFA 154
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + V V ++ + + + ++ R+ A L +
Sbjct: 155 QRFTQYLSVLTIGPVLFFSAVGVSASLG--GNPLLRSVLDYEPVSWLMELARLVAPYLMI 212
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F++ F+P + +++S L G + + W LF H++ + Y+ +Y+ LA ++
Sbjct: 213 SATFAFIYRFVPNTQVRLVSALIGGLVAGLLWQSVGALFAHFMAGSTQYTAIYSSLAILI 272
Query: 250 TCLVFLYMLGVFFILG 265
++++Y+ + ++G
Sbjct: 273 LLMIWIYLGWLILLVG 288
>gi|16767292|ref|NP_462907.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167991551|ref|ZP_02572650.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|197261775|ref|ZP_03161849.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|32699646|sp|Q8ZKT5|YIHY_SALTY RecName: Full=UPF0761 membrane protein yihY
gi|16422590|gb|AAL22866.1| tRNA processing exoribonuclease BN [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|197240030|gb|EDY22650.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|205330040|gb|EDZ16804.1| tRNA-processing ribonuclease BN [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|261249143|emb|CBG27004.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267996313|gb|ACY91198.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301160533|emb|CBW20063.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312915139|dbj|BAJ39113.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321225312|gb|EFX50370.1| Ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323132367|gb|ADX19797.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|332990855|gb|AEF09838.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
Length = 290
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 98/279 (35%), Gaps = 10/279 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + + +L +I N
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGVSLAISSYLLSLR--------WASDLNTVIDNVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L +I ++ +P + L G + + G F YI F +Y +
Sbjct: 182 HILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 242 YGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|111219991|ref|YP_710785.1| putative tRNA processing ribonuclease [Frankia alni ACN14a]
gi|111147523|emb|CAJ59176.1| putative tRNA processing ribonuclease [Frankia alni ACN14a]
Length = 379
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 103/273 (37%), Gaps = 8/273 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ +AS ++ A+LS+FP + + G + + Q V I
Sbjct: 42 RGWLAVAKRVKSQLAILSIPLIASGVAFWAILSIFPAAIAVLTVYGLVASPQTVSNQIAD 101
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRV 122
+ + + + D + +++ GL L+ A + S+G + L ++ A+
Sbjct: 102 LSDSLSPSTSAVLRDWLNGIVSTNHSGLGLGLLLSLAGVLWAVSSGTQNLIKAVTVAFEQ 161
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R R ++ L V + + V A + A G + +++ +
Sbjct: 162 EETRGPVRLRGLAVAMSLGGVVV----AVLIVGGITAGGSLLSHHVADGTVRVVLTVVQW 217
Query: 183 YATMLALFIGLIFVHLFLP-AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + ++ F P + G + ++ +V +V F+ Y+ F Y+
Sbjct: 218 LVLAMIVMAAVATLYRFGPAHTPANWRWASVGAVVATVALIVASVAFSFYVRAFGHYNKT 277
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L ++ +++LY ++GA LNA
Sbjct: 278 YGALGGVVILMLWLYYAVTVVLIGALLNAEAAR 310
>gi|187935176|ref|YP_001887555.1| YihY family protein [Clostridium botulinum B str. Eklund 17B]
gi|187723329|gb|ACD24550.1| YihY family protein [Clostridium botulinum B str. Eklund 17B]
Length = 282
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 130/269 (48%), Gaps = 2/269 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ I +D +A+AS ++ LLS FPFI+F L GF +++ +
Sbjct: 12 LRLLLHLIVKIKNDDIFALASQLAYYLLLSFFPFIIFLITLVGFSNMDSI--QILNGIKA 69
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE + + I++V GL IS L A + SS+G A+ +N+AY E RS+
Sbjct: 70 VVPEAVFDLTSSTIIEVFDKQYTGLLEISILLALWTSSSGFRAVIKGVNKAYDFKENRSF 129
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+IS V+ ++T+++ + V + Y+ K P ++++ R ++
Sbjct: 130 IKRLIISMISVIALALTIILALSMLVFGNVIENYIIKIIPFTKLVVILWNICRYVFVVII 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ F P+ + K ++PG IF+ + W++ + F+ YI F +S Y L ++
Sbjct: 190 MVFIFASIYRFTPSKRLKWRDVIPGSIFSTVGWIITSYGFSFYIDNFRNFSRFYGSLGAV 249
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +L+++ + FILG E+N + +
Sbjct: 250 FILMTWLFLVSILFILGVEINCVLEQFKK 278
>gi|110635357|ref|YP_675565.1| putative ribonuclease BN [Mesorhizobium sp. BNC1]
gi|110286341|gb|ABG64400.1| putative ribonuclease BN [Chelativorans sp. BNC1]
Length = 283
Score = 138 bits (348), Expect = 7e-31, Method: Composition-based stats.
Identities = 116/278 (41%), Positives = 173/278 (62%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ I+ DA HF +DGWAMASH+++SA++++FPF++F A LA FLGA F T
Sbjct: 2 RKLVALRRIVRDAFGHFNADDGWAMASHLAVSAIMALFPFLIFAAALASFLGADAFADTA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +VF WP+ +A+P+ E+ VL V + T + AA+F+SNGVEALR+SLNRAYRV
Sbjct: 62 VHIVFDTWPKEVAEPLAREVRNVLGVRRGDVLTFGVVLAAFFASNGVEALRLSLNRAYRV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS RL S G+VL+A++ +S + V P+A + + I R
Sbjct: 122 EERRSMIFLRLQSLGFVLIATLGFTAISVLLVIAPVAANIAVSRIEWIEPYMGTITLWRY 181
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ L L+ VH++LPA K+ I+PG+IFT + W+ G+ +F Y+ FS+Y+T Y
Sbjct: 182 IVAVVVLVFALVVVHIWLPAGSRKLTDIIPGIIFTLLGWIAGSSIFAAYLGRFSSYTTTY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
AGLASIM +VFLY++ FILG E+NA+++ Y ++
Sbjct: 242 AGLASIMVAVVFLYIISAIFILGGEINAAIMRYREARR 279
>gi|331649730|ref|ZP_08350810.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli M605]
gi|330908203|gb|EGH36722.1| ribonuclease BN [Escherichia coli AA86]
gi|331041363|gb|EGI13513.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli M605]
Length = 290
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|300931681|ref|ZP_07146988.1| YihY family protein [Escherichia coli MS 187-1]
gi|300460520|gb|EFK24013.1| YihY family protein [Escherichia coli MS 187-1]
Length = 290
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRPRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|27364333|ref|NP_759861.1| hypothetical protein VV1_0885 [Vibrio vulnificus CMCP6]
gi|320157725|ref|YP_004190104.1| ribonuclease BN [Vibrio vulnificus MO6-24/O]
gi|32699637|sp|Q8DDS2|Y885_VIBVU RecName: Full=UPF0761 membrane protein VV1_0885
gi|27360451|gb|AAO09388.1| Ribonuclease BN [Vibrio vulnificus CMCP6]
gi|319933037|gb|ADV87901.1| ribonuclease BN [Vibrio vulnificus MO6-24/O]
Length = 313
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 95/270 (35%), Gaps = 8/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
+ I + A +++ LLS+ P + ++ + V +V+ +
Sbjct: 22 FVRYLIARMNHDRINVNAGYLAYITLLSIVPMLTVLLSILSKFSVFENVGSVLQSFIINN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + +A + + A + + + +LN +RV + R
Sbjct: 82 FVPASGDAVHAALQEFIAN-TGKMTAVGAAFLFVAALMLISNIDKNLNYIWRVKKKRRAV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + I + + + +
Sbjct: 141 FSFSMYWMVLTLGPILVGASIAATSYITSL------RLLDSEAISTVYDQLLRWLPFILS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++L +P K + + G + + + + F YI F +Y +Y LA+I
Sbjct: 195 SSAFVGLYLLVPNKKVQFSHAVVGAMIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y+ + ++GAE+ A++ +
Sbjct: 255 ILFVWVYLCWLIVLIGAEVTAALGEREHWR 284
>gi|332967833|gb|EGK06932.1| YihY family protein [Kingella kingae ATCC 23330]
Length = 410
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 41/264 (15%), Positives = 95/264 (35%), Gaps = 10/264 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFG 68
+ + F E A ++ + LL++ P + + + +D V
Sbjct: 19 RFLLFLVHRFGEAGISQTAGSLTFTTLLALIPLLTVMLVVITAFPMFGDVSASFMDFVHR 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A + + + + A + TI LA S + + + NR +RV + RS
Sbjct: 79 TIVPSGASAVASYLDEFK-MQAGKMTTIGVLAMMVTSIMLIHTIDATFNRIWRVQKQRSM 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + +G + L + + + ++ V + + ++
Sbjct: 138 LVRLPVYWGLLTLGPIFVGVSLSASASLLHFGQAVEPN--------WFTSSLQSLGQIVL 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ L+ + +P + G + + + F YI F++Y+ +Y A+I
Sbjct: 190 NALILLLFYYGVPNCYVPLRDAAIGASVASVLFTLAKYGFGLYISNFNSYALIYGAFAAI 249
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
L++L ++ + GA + AS+
Sbjct: 250 PIFLIWLNLVWTIILGGALIAASI 273
>gi|319949392|ref|ZP_08023458.1| ribonuclease BN [Dietzia cinnamea P4]
gi|319436939|gb|EFV91993.1| ribonuclease BN [Dietzia cinnamea P4]
Length = 341
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 101/260 (38%), Gaps = 3/260 (1%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDE 81
G +A ++ +LS+FP ++ +L G G + V V+D++ P + P+
Sbjct: 1 RGPDLAGSLTYYGVLSLFPAVLVVVSLLGVFGQGSRTVDAVMDMLSDVAPPEVLDPVRGP 60
Query: 82 ILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ ++ PA + A + +S V AL ++N + + E R +
Sbjct: 61 VEALVTTPAAGTALIVGTAVALWSASRYVRALGRAMNAMFGIEEGRPPWRLLPAGLALTA 120
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L V + + V + L + + A ++A+ + L ++ F
Sbjct: 121 LLIVLVAVGGVALAFSGPVAETVGDWIGLGDTALAVWGVAKWPAAVIAVILALAILYRFA 180
Query: 201 PAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P + + G V + ++ F ++ +Y LA ++ L++L+++
Sbjct: 181 PNISGRRFSWVSLGAAAALAIMGVATAGLSFFVSNFGNFNRVYGSLAGVIVFLLWLWLVN 240
Query: 260 VFFILGAELNASMIIYYWRK 279
+ + G L+A ++ +
Sbjct: 241 MAVVFGVRLDAEVLRVRQLR 260
>gi|161617147|ref|YP_001591112.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|189039571|sp|A9MZA1|YIHY_SALPB RecName: Full=UPF0761 membrane protein yihY
gi|161366511|gb|ABX70279.1| hypothetical protein SPAB_04987 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 290
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + +L +I N
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L +I ++ +P + L G + + G F YI F +Y +
Sbjct: 182 RILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLFESGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 242 YGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|88810285|ref|ZP_01125542.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
gi|88791915|gb|EAR23025.1| Ribonuclease BN [Nitrococcus mobilis Nb-231]
Length = 466
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 94/259 (36%), Gaps = 2/259 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
V + Y + A+ + + LLS+ P + ++ G H + ++
Sbjct: 32 FVLRLGYAVLRDLSRGQLMLQATSLVYTTLLSLVPLLAVSFSVLKAFGVHNQIEPALNQF 91
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A+ I V V L ++ Y ++ + + N + + R
Sbjct: 92 LAPLGPKGAEITQRIIEFVENVQVGVLGSLGLALLLYTVVGLMQKIERAFNELWHIRHQR 151
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L+ V + + + + + A+ L L I
Sbjct: 152 APAQLFSDYLSVLLVGPVLIFTALGITA--AVFGSETVQQLSAVQPLGLAIELITRIVPF 209
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + F++ F+P + ++ S L G + I W + +F I T S Y+ +Y+ A
Sbjct: 210 LLIIGAFTFIYAFVPNTRVQVSSALVGGMVAGILWQITGWIFAAVIATSSKYTAIYSAFA 269
Query: 247 SIMTCLVFLYMLGVFFILG 265
++ +++LY+ + ++G
Sbjct: 270 GLILFMMWLYLSWLILLIG 288
>gi|94310076|ref|YP_583286.1| tRNA-processing RNAse BN [Cupriavidus metallidurans CH34]
gi|93353928|gb|ABF08017.1| ribonuclease BN [Cupriavidus metallidurans CH34]
Length = 447
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 96/277 (34%), Gaps = 8/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI- 63
V + A+ E+ +++ ++ + +L+V P + L + I
Sbjct: 15 LQKVRALARYALRRAGEDRLPQVSASLTFTTVLAVVPVLTVAFALLAAFPVFRDFRGQIE 74
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + + A+GL + S + + +LN +RV
Sbjct: 75 MFLFQNLIPGGNISDSVSRYIGQFSRSARGLTALGLAGLMVTSVLTMLTVEDALNAIWRV 134
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + L+ + + L V + V + P +
Sbjct: 135 RRRRPFAQRVLVFWAVLTLGPVLIGASLSVSSYLMSVSMGYVGNLPFG------VGFVIS 188
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + F+++ +P A + + I +++ V F ++I TY+ +Y
Sbjct: 189 LVPVLLSALAFAFLYMAVPNAYVEWRDAIVAGIVAAVAFEVAKRGFGYFITHIPTYTAVY 248
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A + L+++Y+ + +LGA + A++ +
Sbjct: 249 GTFAVLPLFLLWMYVSWLVTLLGATIAANLPVIREGH 285
>gi|195940496|ref|ZP_03085878.1| ribonuclease BN [Escherichia coli O157:H7 str. EC4024]
Length = 293
Score = 138 bits (348), Expect = 8e-31, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 102/276 (36%), Gaps = 10/276 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ + E++ +A +++ +LLS+ P + L V +
Sbjct: 14 RPLRAWLKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSAFPMFADVSMQLRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
VF + I + I Q +A +K + + A + + ++ +LN +R +
Sbjct: 74 FVFANFIPATGDVIQNYIEQFVANSSK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKK 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+R + + + + L + + + +L +I N
Sbjct: 133 VRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLC--------WATDLNSVIDNVLRIF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ ++ ++ +P + + G + + + +G F YI F +Y +Y
Sbjct: 185 PLILSWLSFWLLYSVVPTTRVPNRDAVVGALVAALLFELGKKGFALYITMFPSYQLIYGV 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I V++Y +LGAE+ ++ +Y KK
Sbjct: 245 LAVIPILFVWVYWTWCIVLLGAEITVTLGVYRELKK 280
>gi|215489214|ref|YP_002331645.1| ribonuclease BN [Escherichia coli O127:H6 str. E2348/69]
gi|312969373|ref|ZP_07783575.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|254789778|sp|B7UNK3|YIHY_ECO27 RecName: Full=UPF0761 membrane protein yihY
gi|215267286|emb|CAS11735.1| predicted inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
gi|312285920|gb|EFR13838.1| conserved hypothetical protein [Escherichia coli 2362-75]
Length = 290
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
+ ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 KHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|326629522|gb|EGE35865.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 290
Score = 138 bits (348), Expect = 9e-31, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 96/279 (34%), Gaps = 10/279 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + +L +I N
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L +I ++ +P + L G + G F YI F +Y +
Sbjct: 182 RILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLXEAGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 242 YGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|218782337|ref|YP_002433655.1| ribonuclease BN [Desulfatibacillum alkenivorans AK-01]
gi|218763721|gb|ACL06187.1| ribonuclease BN [Desulfatibacillum alkenivorans AK-01]
Length = 450
Score = 138 bits (347), Expect = 9e-31, Method: Composition-based stats.
Identities = 42/262 (16%), Positives = 98/262 (37%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ A+ F+ ++ W AS ++ +LL + P + +A +G + ++
Sbjct: 37 RFLRVPALAVNDFLRDNCWMRASALTYYSLLGIVPLLAMIMGIARGMGFEARIEELLLHE 96
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
FGA V+ K + + + + L + + I+ N+ + + R
Sbjct: 97 FGAQELVLTKVLEFAKAMLSNTRGGVVNGLWMLLLLWTVIRLFGNIEIAFNQIWGFAKGR 156
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S + LL V + S V I + ++ +I + +
Sbjct: 157 SQARKVIDYLAVALLMPVLWLPASSAQVLIASQIEAYTQWAFLQNVGDIIQFTLLFFLPF 216
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+++ +++F+P S + I ++ + + + V + + +Y A
Sbjct: 217 AMIWVLFSCLYIFMPNGSVSWTSGIVAGIVAGSAFQLFQRFYIEFQVGVARNNAIYGSFA 276
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ L++LYM V + GAE+
Sbjct: 277 ALPLFLIWLYMSWVIVLFGAEI 298
>gi|163789761|ref|ZP_02184198.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
gi|159874983|gb|EDP69050.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
Length = 329
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 2 REYFCIVFDIIYDAIE-HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ F F + + ++ ++ + + A+ ++ LLS+FP ++ AN+ +
Sbjct: 7 QASFKDKFKSLIEVVKPNWARAEVSSNAAELAYFTLLSLFPILLVIANIIPLFPINA--S 64
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ ++ A P I + + L+ + G +I + + + +S AL+ LN Y
Sbjct: 65 DILPMLETAVPPDIYNVLAPVLESYLSSSSGGAISIGLITSLWSASKAFNALQNVLNDVY 124
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I RL+SF L+ + + F+FV L +++ F +L+L ++
Sbjct: 125 GVEKRNNFIIVRLVSFLVQLVIVAIVGALIFIFVFGEQILLFIQDFIGIDLSLILQVFGY 184
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ L + + V+ +P + I LPG IF + W++ + FT Y+ +
Sbjct: 185 KWLVLLVVLILVITMVYFLVPNHRLHIKYALPGAIFATVGWLILSQAFTLYVKYAGGEAA 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A + +++LY+ + ++G +N + +
Sbjct: 245 ASATFGVFIVLMLWLYLSAIILLIGGLINTIYFEFKTGR 283
>gi|24375881|ref|NP_719924.1| ribonuclease BN [Shewanella oneidensis MR-1]
gi|32699638|sp|Q8E985|Y4401_SHEON RecName: Full=UPF0761 membrane protein SO_4401
gi|24350851|gb|AAN57368.1|AE015873_11 ribonuclease BN [Shewanella oneidensis MR-1]
Length = 295
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 104/276 (37%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R ++ + + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLLLGIWHFLLHLRQRLVEDQINIRAGHLAYVTLLSLVPMVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEAFVYENFLPAAGDTVQVYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + + + L
Sbjct: 129 WRTKEKRSVVVAFSMYWMVITLGPVLVGASLVATSYVVSLKLFEGDALSGMMPL------ 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L + +++ +P K K L G + + + +G F Y+ F +Y
Sbjct: 183 FIERLPLLFSVAAFLLLYMVVPNQKVKFWHALLGAVVAALLFELGKKGFAFYVTKFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|289663480|ref|ZP_06485061.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. vasculorum NCPPB702]
Length = 425
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRY 283
>gi|24115176|ref|NP_709686.1| ribonuclease BN [Shigella flexneri 2a str. 301]
gi|32699633|sp|Q83MJ2|YIHY_SHIFL RecName: Full=UPF0761 membrane protein yihY
gi|24054456|gb|AAN45393.1| tRNA processing exoribonuclease BN [Shigella flexneri 2a str. 301]
Length = 290
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLPLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|288559246|sp|A9BMQ0|Y4966_DELAS RecName: Full=UPF0761 membrane protein Daci_4966
Length = 417
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 99/260 (38%), Gaps = 9/260 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
E F E+ AS ++ + +L++ PF L V V+ ++ PE I
Sbjct: 30 ERFREDRLGVTASSLTFTTVLALVPFFTVALALFTAFPIFSRVQIVLERWLIDSLIPETI 89
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q A A L + + + +LN +RV ++R LI
Sbjct: 90 ARQVLGYLTQF-ASKASQLGMAGFSILVITAVALILTIDRTLNNIWRVRQLRPLGQRVLI 148
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + + + A + P + LAL G+
Sbjct: 149 YWAAITLGPLVLGLSLVLSSYVMSASRGLVNALPEG------LRFIFDSIEYLALAAGMA 202
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + Y+ + TYS +Y A++ L++
Sbjct: 203 GLYHYVPNTAVRWRHAWVGGLFVATCMELAKKALGLYLASVPTYSVIYGTFATLPILLIW 262
Query: 255 LYMLGVFFILGAELNASMII 274
+YM + +LGA + A + I
Sbjct: 263 IYMAWIIVLLGAVVTAYLPI 282
>gi|15804472|ref|NP_290512.1| ribonuclease BN [Escherichia coli O157:H7 EDL933]
gi|15834063|ref|NP_312836.1| ribonuclease BN [Escherichia coli O157:H7 str. Sakai]
gi|16131726|ref|NP_418322.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. MG1655]
gi|26250648|ref|NP_756688.1| ribonuclease BN [Escherichia coli CFT073]
gi|30064825|ref|NP_838996.1| ribonuclease BN [Shigella flexneri 2a str. 2457T]
gi|82778941|ref|YP_405290.1| ribonuclease BN [Shigella dysenteriae Sd197]
gi|89110142|ref|AP_003922.1| tRNA processing exoribonuclease BN [Escherichia coli str. K-12
substr. W3110]
gi|91213427|ref|YP_543413.1| ribonuclease BN [Escherichia coli UTI89]
gi|110644224|ref|YP_671954.1| ribonuclease BN [Escherichia coli 536]
gi|110807428|ref|YP_690948.1| ribonuclease BN [Shigella flexneri 5 str. 8401]
gi|157154769|ref|YP_001465370.1| ribonuclease BN [Escherichia coli E24377A]
gi|157163356|ref|YP_001460674.1| ribonuclease BN [Escherichia coli HS]
gi|168748830|ref|ZP_02773852.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4113]
gi|168755559|ref|ZP_02780566.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4401]
gi|168761742|ref|ZP_02786749.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4501]
gi|168768176|ref|ZP_02793183.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4486]
gi|168775292|ref|ZP_02800299.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4196]
gi|168780792|ref|ZP_02805799.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4076]
gi|168799547|ref|ZP_02824554.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC508]
gi|170022102|ref|YP_001727056.1| ribonuclease BN [Escherichia coli ATCC 8739]
gi|170083358|ref|YP_001732678.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|170682650|ref|YP_001746216.1| ribonuclease BN [Escherichia coli SMS-3-5]
gi|187732965|ref|YP_001882581.1| ribonuclease BN [Shigella boydii CDC 3083-94]
gi|188494355|ref|ZP_03001625.1| YihY family protein [Escherichia coli 53638]
gi|191166407|ref|ZP_03028238.1| tRNA-processing ribonuclease BN [Escherichia coli B7A]
gi|191173894|ref|ZP_03035414.1| tRNA-processing ribonuclease BN [Escherichia coli F11]
gi|193063932|ref|ZP_03045018.1| tRNA-processing ribonuclease BN [Escherichia coli E22]
gi|193067967|ref|ZP_03048932.1| tRNA-processing ribonuclease BN [Escherichia coli E110019]
gi|194433276|ref|ZP_03065557.1| tRNA-processing ribonuclease BN [Shigella dysenteriae 1012]
gi|194438282|ref|ZP_03070373.1| tRNA-processing ribonuclease BN [Escherichia coli 101-1]
gi|195937525|ref|ZP_03082907.1| ribonuclease BN [Escherichia coli O157:H7 str. EC4024]
gi|208807855|ref|ZP_03250192.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4206]
gi|208812015|ref|ZP_03253344.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4045]
gi|208820357|ref|ZP_03260677.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4042]
gi|209398243|ref|YP_002273403.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4115]
gi|209921360|ref|YP_002295444.1| ribonuclease BN [Escherichia coli SE11]
gi|217326271|ref|ZP_03442355.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
TW14588]
gi|218556446|ref|YP_002389360.1| ribonuclease BN [Escherichia coli IAI1]
gi|218692171|ref|YP_002400383.1| ribonuclease BN [Escherichia coli ED1a]
gi|218697598|ref|YP_002405265.1| ribonuclease BN [Escherichia coli 55989]
gi|218707513|ref|YP_002415032.1| ribonuclease BN [Escherichia coli UMN026]
gi|227885379|ref|ZP_04003184.1| ribonuclease BN [Escherichia coli 83972]
gi|237702915|ref|ZP_04533396.1| tRNA-processing ribonuclease BN [Escherichia sp. 3_2_53FAA]
gi|238902953|ref|YP_002928749.1| putative inner membrane protein [Escherichia coli BW2952]
gi|253775478|ref|YP_003038309.1| ribonuclease BN [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254039095|ref|ZP_04873145.1| tRNA-processing ribonuclease BN [Escherichia sp. 1_1_43]
gi|254163837|ref|YP_003046945.1| ribonuclease BN [Escherichia coli B str. REL606]
gi|254795880|ref|YP_003080717.1| ribonuclease BN [Escherichia coli O157:H7 str. TW14359]
gi|256021525|ref|ZP_05435390.1| ribonuclease BN [Shigella sp. D9]
gi|256026080|ref|ZP_05439945.1| ribonuclease BN [Escherichia sp. 4_1_40B]
gi|260846346|ref|YP_003224124.1| putative inner membrane protein [Escherichia coli O103:H2 str.
12009]
gi|260857716|ref|YP_003231607.1| putative inner membrane protein [Escherichia coli O26:H11 str.
11368]
gi|260870602|ref|YP_003237004.1| putative inner membrane protein [Escherichia coli O111:H- str.
11128]
gi|291285297|ref|YP_003502115.1| tRNA-processing ribonuclease BN [Escherichia coli O55:H7 str.
CB9615]
gi|293407508|ref|ZP_06651427.1| rbn [Escherichia coli FVEC1412]
gi|293413318|ref|ZP_06655979.1| conserved hypothetical protein [Escherichia coli B354]
gi|293417348|ref|ZP_06659972.1| rbn [Escherichia coli B185]
gi|293470196|ref|ZP_06664607.1| rbn [Escherichia coli B088]
gi|297520785|ref|ZP_06939171.1| ribonuclease BN [Escherichia coli OP50]
gi|298383251|ref|ZP_06992844.1| rbn [Escherichia coli FVEC1302]
gi|300819266|ref|ZP_07099466.1| YihY family protein [Escherichia coli MS 107-1]
gi|300823708|ref|ZP_07103834.1| YihY family protein [Escherichia coli MS 119-7]
gi|300896426|ref|ZP_07114958.1| YihY family protein [Escherichia coli MS 198-1]
gi|300906204|ref|ZP_07123916.1| YihY family protein [Escherichia coli MS 84-1]
gi|300919073|ref|ZP_07135615.1| YihY family protein [Escherichia coli MS 115-1]
gi|300925924|ref|ZP_07141759.1| YihY family protein [Escherichia coli MS 182-1]
gi|300938446|ref|ZP_07153189.1| YihY family protein [Escherichia coli MS 21-1]
gi|300948144|ref|ZP_07162276.1| YihY family protein [Escherichia coli MS 116-1]
gi|300957275|ref|ZP_07169503.1| YihY family protein [Escherichia coli MS 175-1]
gi|300976515|ref|ZP_07173498.1| YihY family protein [Escherichia coli MS 45-1]
gi|300985945|ref|ZP_07177651.1| YihY family protein [Escherichia coli MS 200-1]
gi|301023861|ref|ZP_07187593.1| YihY family protein [Escherichia coli MS 69-1]
gi|301046693|ref|ZP_07193819.1| YihY family protein [Escherichia coli MS 185-1]
gi|301303357|ref|ZP_07209481.1| YihY family protein [Escherichia coli MS 124-1]
gi|301328203|ref|ZP_07221331.1| YihY family protein [Escherichia coli MS 78-1]
gi|301648465|ref|ZP_07248194.1| YihY family protein [Escherichia coli MS 146-1]
gi|306813852|ref|ZP_07448028.1| ribonuclease BN [Escherichia coli NC101]
gi|307140581|ref|ZP_07499937.1| ribonuclease BN [Escherichia coli H736]
gi|307313992|ref|ZP_07593606.1| ribonuclease BN [Escherichia coli W]
gi|309783810|ref|ZP_07678455.1| YihY family protein [Shigella dysenteriae 1617]
gi|309796591|ref|ZP_07690997.1| YihY family protein [Escherichia coli MS 145-7]
gi|312971829|ref|ZP_07786003.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331644617|ref|ZP_08345736.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H736]
gi|331655572|ref|ZP_08356564.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli M718]
gi|331660435|ref|ZP_08361369.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA206]
gi|331665534|ref|ZP_08366432.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA143]
gi|331670730|ref|ZP_08371566.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA271]
gi|331675343|ref|ZP_08376093.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA280]
gi|331679995|ref|ZP_08380657.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H591]
gi|331685622|ref|ZP_08386205.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H299]
gi|332282764|ref|ZP_08395177.1| tRNA-processing ribonuclease BN [Shigella sp. D9]
gi|67471903|sp|P0A8K8|YIHY_ECOLI RecName: Full=UPF0761 membrane protein yihY
gi|67471904|sp|P0A8K9|YIHY_ECOL6 RecName: Full=UPF0761 membrane protein yihY
gi|67471905|sp|P0A8L0|YIHY_ECO57 RecName: Full=UPF0761 membrane protein yihY
gi|122421687|sp|Q1R432|YIHY_ECOUT RecName: Full=UPF0761 membrane protein yihY
gi|123047804|sp|Q0SZ72|YIHY_SHIF8 RecName: Full=UPF0761 membrane protein yihY
gi|123343373|sp|Q0TAH6|YIHY_ECOL5 RecName: Full=UPF0761 membrane protein yihY
gi|123561253|sp|Q32A56|YIHY_SHIDS RecName: Full=UPF0761 membrane protein yihY
gi|166918687|sp|A7ZU91|YIHY_ECO24 RecName: Full=UPF0761 membrane protein yihY
gi|166918688|sp|A8A6Y7|YIHY_ECOHS RecName: Full=UPF0761 membrane protein yihY
gi|189039569|sp|B1IVJ2|YIHY_ECOLC RecName: Full=UPF0761 membrane protein yihY
gi|226737440|sp|B5YZ23|YIHY_ECO5E RecName: Full=UPF0761 membrane protein yihY
gi|226737442|sp|B7M685|YIHY_ECO8A RecName: Full=UPF0761 membrane protein yihY
gi|226737443|sp|B1XB54|YIHY_ECODH RecName: Full=UPF0761 membrane protein yihY
gi|226737444|sp|B7NFI5|YIHY_ECOLU RecName: Full=UPF0761 membrane protein yihY
gi|226737445|sp|B6I4M3|YIHY_ECOSE RecName: Full=UPF0761 membrane protein yihY
gi|226737446|sp|B1LMS0|YIHY_ECOSM RecName: Full=UPF0761 membrane protein yihY
gi|226737459|sp|B2TVN0|YIHY_SHIB3 RecName: Full=UPF0761 membrane protein yihY
gi|254789779|sp|B7L9D9|YIHY_ECO55 RecName: Full=UPF0761 membrane protein yihY
gi|254789780|sp|B7N2M7|YIHY_ECO81 RecName: Full=UPF0761 membrane protein yihY
gi|259552135|sp|C5A054|YIHY_ECOBW RecName: Full=UPF0761 membrane protein yihY
gi|12518772|gb|AAG59076.1|AE005619_9 tRNA processing exoribonuclease BN [Escherichia coli O157:H7 str.
EDL933]
gi|26111079|gb|AAN83262.1|AE016770_62 Ribonuclease BN [Escherichia coli CFT073]
gi|304990|gb|AAB03019.1| ORF_o290 [Escherichia coli str. K-12 substr. MG1655]
gi|1790319|gb|AAD13448.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. MG1655]
gi|13364285|dbj|BAB38232.1| tRNA processing exoribonuclease BN [Escherichia coli O157:H7 str.
Sakai]
gi|30043085|gb|AAP18807.1| tRNA processing exoribonuclease BN [Shigella flexneri 2a str.
2457T]
gi|81243089|gb|ABB63799.1| tRNA processing exoribonuclease BN [Shigella dysenteriae Sd197]
gi|85676173|dbj|BAE77423.1| tRNA processing exoribonuclease BN [Escherichia coli str. K12
substr. W3110]
gi|91075001|gb|ABE09882.1| tRNA processing exoribonuclease BN [Escherichia coli UTI89]
gi|110345816|gb|ABG72053.1| ribonuclease BN [Escherichia coli 536]
gi|110616976|gb|ABF05643.1| tRNA processing exoribonuclease BN [Shigella flexneri 5 str. 8401]
gi|157069036|gb|ABV08291.1| tRNA-processing ribonuclease BN [Escherichia coli HS]
gi|157076799|gb|ABV16507.1| tRNA-processing ribonuclease BN [Escherichia coli E24377A]
gi|169757030|gb|ACA79729.1| ribonuclease BN [Escherichia coli ATCC 8739]
gi|169891193|gb|ACB04900.1| predicted inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|170520368|gb|ACB18546.1| tRNA-processing ribonuclease BN [Escherichia coli SMS-3-5]
gi|187429957|gb|ACD09231.1| tRNA-processing ribonuclease BN [Shigella boydii CDC 3083-94]
gi|187769224|gb|EDU33068.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4196]
gi|188016749|gb|EDU54871.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4113]
gi|188489554|gb|EDU64657.1| YihY family protein [Escherichia coli 53638]
gi|189001480|gb|EDU70466.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4076]
gi|189357179|gb|EDU75598.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4401]
gi|189362765|gb|EDU81184.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4486]
gi|189367868|gb|EDU86284.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4501]
gi|189378076|gb|EDU96492.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC508]
gi|190903507|gb|EDV63225.1| tRNA-processing ribonuclease BN [Escherichia coli B7A]
gi|190905852|gb|EDV65471.1| tRNA-processing ribonuclease BN [Escherichia coli F11]
gi|192929397|gb|EDV83005.1| tRNA-processing ribonuclease BN [Escherichia coli E22]
gi|192958587|gb|EDV89025.1| tRNA-processing ribonuclease BN [Escherichia coli E110019]
gi|194418560|gb|EDX34648.1| tRNA-processing ribonuclease BN [Shigella dysenteriae 1012]
gi|194422719|gb|EDX38715.1| tRNA-processing ribonuclease BN [Escherichia coli 101-1]
gi|208727656|gb|EDZ77257.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4206]
gi|208733292|gb|EDZ81979.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4045]
gi|208740480|gb|EDZ88162.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4042]
gi|209159643|gb|ACI37076.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
EC4115]
gi|209752628|gb|ACI74621.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209752630|gb|ACI74622.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209752632|gb|ACI74623.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209752634|gb|ACI74624.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209752636|gb|ACI74625.1| D-Tyr-tRNATyr deacylase [Escherichia coli]
gi|209914619|dbj|BAG79693.1| tRNA processing exoribonuclease BN [Escherichia coli SE11]
gi|217322492|gb|EEC30916.1| tRNA-processing ribonuclease BN [Escherichia coli O157:H7 str.
TW14588]
gi|218354330|emb|CAV01054.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|218363215|emb|CAR00857.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|218429735|emb|CAR10696.2| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|218434610|emb|CAR15541.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|222035599|emb|CAP78344.1| tRNA-processing ribonuclease BN [Escherichia coli LF82]
gi|226838531|gb|EEH70560.1| tRNA-processing ribonuclease BN [Escherichia sp. 1_1_43]
gi|226902852|gb|EEH89111.1| tRNA-processing ribonuclease BN [Escherichia sp. 3_2_53FAA]
gi|227837637|gb|EEJ48103.1| ribonuclease BN [Escherichia coli 83972]
gi|238862583|gb|ACR64581.1| predicted inner membrane protein [Escherichia coli BW2952]
gi|242379423|emb|CAQ34237.1| predicted inner membrane protein [Escherichia coli BL21(DE3)]
gi|253326522|gb|ACT31124.1| ribonuclease BN [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975738|gb|ACT41409.1| ribonuclease BN [Escherichia coli B str. REL606]
gi|253979894|gb|ACT45564.1| ribonuclease BN [Escherichia coli BL21(DE3)]
gi|254595280|gb|ACT74641.1| predicted inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|257756365|dbj|BAI27867.1| predicted inner membrane protein [Escherichia coli O26:H11 str.
11368]
gi|257761493|dbj|BAI32990.1| predicted inner membrane protein [Escherichia coli O103:H2 str.
12009]
gi|257766958|dbj|BAI38453.1| predicted inner membrane protein [Escherichia coli O111:H- str.
11128]
gi|260451278|gb|ACX41700.1| ribonuclease BN [Escherichia coli DH1]
gi|281603274|gb|ADA76258.1| tRNA-processing ribonuclease BN [Shigella flexneri 2002017]
gi|290765170|gb|ADD59131.1| tRNA-processing ribonuclease BN [Escherichia coli O55:H7 str.
CB9615]
gi|291321406|gb|EFE60845.1| rbn [Escherichia coli B088]
gi|291425425|gb|EFE98464.1| rbn [Escherichia coli FVEC1412]
gi|291430868|gb|EFF03864.1| rbn [Escherichia coli B185]
gi|291468066|gb|EFF10564.1| conserved hypothetical protein [Escherichia coli B354]
gi|294491225|gb|ADE89981.1| tRNA-processing ribonuclease BN [Escherichia coli IHE3034]
gi|298276285|gb|EFI17805.1| rbn [Escherichia coli FVEC1302]
gi|300301332|gb|EFJ57717.1| YihY family protein [Escherichia coli MS 185-1]
gi|300306481|gb|EFJ61001.1| YihY family protein [Escherichia coli MS 200-1]
gi|300315964|gb|EFJ65748.1| YihY family protein [Escherichia coli MS 175-1]
gi|300359699|gb|EFJ75569.1| YihY family protein [Escherichia coli MS 198-1]
gi|300396868|gb|EFJ80406.1| YihY family protein [Escherichia coli MS 69-1]
gi|300402006|gb|EFJ85544.1| YihY family protein [Escherichia coli MS 84-1]
gi|300410087|gb|EFJ93625.1| YihY family protein [Escherichia coli MS 45-1]
gi|300413812|gb|EFJ97122.1| YihY family protein [Escherichia coli MS 115-1]
gi|300418028|gb|EFK01339.1| YihY family protein [Escherichia coli MS 182-1]
gi|300452331|gb|EFK15951.1| YihY family protein [Escherichia coli MS 116-1]
gi|300456599|gb|EFK20092.1| YihY family protein [Escherichia coli MS 21-1]
gi|300523770|gb|EFK44839.1| YihY family protein [Escherichia coli MS 119-7]
gi|300528152|gb|EFK49214.1| YihY family protein [Escherichia coli MS 107-1]
gi|300841311|gb|EFK69071.1| YihY family protein [Escherichia coli MS 124-1]
gi|300845340|gb|EFK73100.1| YihY family protein [Escherichia coli MS 78-1]
gi|301073461|gb|EFK88267.1| YihY family protein [Escherichia coli MS 146-1]
gi|305852850|gb|EFM53297.1| ribonuclease BN [Escherichia coli NC101]
gi|306906309|gb|EFN36825.1| ribonuclease BN [Escherichia coli W]
gi|307556027|gb|ADN48802.1| tRNA processing ribonuclease BN [Escherichia coli ABU 83972]
gi|307628959|gb|ADN73263.1| ribonuclease BN [Escherichia coli UM146]
gi|308119747|gb|EFO57009.1| YihY family protein [Escherichia coli MS 145-7]
gi|308928181|gb|EFP73643.1| YihY family protein [Shigella dysenteriae 1617]
gi|309704312|emb|CBJ03661.1| tRNA-processing ribonuclease BN [Escherichia coli ETEC H10407]
gi|310334206|gb|EFQ00411.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|312948458|gb|ADR29285.1| ribonuclease BN [Escherichia coli O83:H1 str. NRG 857C]
gi|313647073|gb|EFS11528.1| hypothetical protein SF2457T_4439 [Shigella flexneri 2a str. 2457T]
gi|315138454|dbj|BAJ45613.1| tRNA-processing ribonuclease BN [Escherichia coli DH1]
gi|315254252|gb|EFU34220.1| YihY family protein [Escherichia coli MS 85-1]
gi|315289589|gb|EFU48982.1| YihY family protein [Escherichia coli MS 110-3]
gi|315292759|gb|EFU52111.1| YihY family protein [Escherichia coli MS 153-1]
gi|315300238|gb|EFU59475.1| YihY family protein [Escherichia coli MS 16-3]
gi|315618746|gb|EFU99330.1| tRNA-processing ribonuclease BN [Escherichia coli 3431]
gi|320176398|gb|EFW51453.1| Ribonuclease BN [Shigella dysenteriae CDC 74-1112]
gi|320182310|gb|EFW57211.1| Ribonuclease BN [Shigella boydii ATCC 9905]
gi|320191022|gb|EFW65672.1| Ribonuclease BN [Escherichia coli O157:H7 str. EC1212]
gi|320196892|gb|EFW71514.1| Ribonuclease BN [Escherichia coli WV_060327]
gi|320198915|gb|EFW73513.1| Ribonuclease BN [Escherichia coli EC4100B]
gi|320639225|gb|EFX08852.1| hypothetical protein ECO5101_06694 [Escherichia coli O157:H7 str.
G5101]
gi|320644613|gb|EFX13667.1| hypothetical protein ECO9389_05543 [Escherichia coli O157:H- str.
493-89]
gi|320649937|gb|EFX18445.1| hypothetical protein ECO2687_16032 [Escherichia coli O157:H- str. H
2687]
gi|320655243|gb|EFX23189.1| hypothetical protein ECO7815_15024 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660870|gb|EFX28316.1| hypothetical protein ECO5905_07501 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666030|gb|EFX33049.1| hypothetical protein ECOSU61_21657 [Escherichia coli O157:H7 str.
LSU-61]
gi|323155113|gb|EFZ41301.1| YihY family protein [Escherichia coli EPECa14]
gi|323161218|gb|EFZ47135.1| YihY family protein [Escherichia coli E128010]
gi|323174380|gb|EFZ60006.1| YihY family protein [Escherichia coli LT-68]
gi|323177896|gb|EFZ63480.1| tRNA-processing ribonuclease BN [Escherichia coli 1180]
gi|323182405|gb|EFZ67812.1| tRNA-processing ribonuclease BN [Escherichia coli 1357]
gi|323189693|gb|EFZ74972.1| tRNA-processing ribonuclease BN [Escherichia coli RN587/1]
gi|323380763|gb|ADX53031.1| ribonuclease BN [Escherichia coli KO11]
gi|323934374|gb|EGB30787.1| YihY family protein [Escherichia coli E1520]
gi|323939056|gb|EGB35273.1| YihY family protein [Escherichia coli E482]
gi|323943715|gb|EGB39813.1| YihY family protein [Escherichia coli H120]
gi|323954343|gb|EGB50128.1| YihY family protein [Escherichia coli H263]
gi|323959347|gb|EGB55008.1| YihY family protein [Escherichia coli H489]
gi|323964234|gb|EGB59717.1| YihY family protein [Escherichia coli M863]
gi|323969752|gb|EGB65035.1| YihY family protein [Escherichia coli TA007]
gi|323974289|gb|EGB69418.1| YihY family protein [Escherichia coli TW10509]
gi|324006834|gb|EGB76053.1| YihY family protein [Escherichia coli MS 57-2]
gi|324012555|gb|EGB81774.1| YihY family protein [Escherichia coli MS 60-1]
gi|324020468|gb|EGB89687.1| YihY family protein [Escherichia coli MS 117-3]
gi|324115620|gb|EGC09558.1| YihY family protein [Escherichia coli E1167]
gi|326338109|gb|EGD61939.1| Ribonuclease BN [Escherichia coli O157:H7 str. 1044]
gi|326342596|gb|EGD66369.1| Ribonuclease BN [Escherichia coli O157:H7 str. 1125]
gi|327250516|gb|EGE62224.1| tRNA-processing ribonuclease BN [Escherichia coli STEC_7v]
gi|331036079|gb|EGI08315.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H736]
gi|331046673|gb|EGI18758.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli M718]
gi|331052384|gb|EGI24421.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA206]
gi|331057219|gb|EGI29209.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA143]
gi|331061985|gb|EGI33908.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA271]
gi|331067403|gb|EGI38808.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli TA280]
gi|331072321|gb|EGI43654.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H591]
gi|331077093|gb|EGI48308.1| tRNA-processing ribonuclease BN (RNase BN) [Escherichia coli H299]
gi|332084115|gb|EGI89320.1| tRNA-processing ribonuclease BN [Shigella boydii 5216-82]
gi|332085137|gb|EGI90315.1| tRNA-processing ribonuclease BN [Shigella dysenteriae 155-74]
gi|332105116|gb|EGJ08462.1| tRNA-processing ribonuclease BN [Shigella sp. D9]
gi|332345878|gb|AEE59212.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|332751472|gb|EGJ81873.1| tRNA-processing ribonuclease BN [Shigella flexneri K-671]
gi|332751634|gb|EGJ82033.1| tRNA-processing ribonuclease BN [Shigella flexneri 4343-70]
gi|332752525|gb|EGJ82911.1| tRNA-processing ribonuclease BN [Shigella flexneri 2747-71]
gi|332764587|gb|EGJ94819.1| tRNA-processing ribonuclease BN [Shigella flexneri 2930-71]
gi|332997673|gb|EGK17285.1| tRNA-processing ribonuclease BN [Shigella flexneri VA-6]
gi|332998478|gb|EGK18076.1| tRNA-processing ribonuclease BN [Shigella flexneri K-272]
gi|332998557|gb|EGK18154.1| tRNA-processing ribonuclease BN [Shigella flexneri K-218]
gi|333013897|gb|EGK33259.1| tRNA-processing ribonuclease BN [Shigella flexneri K-304]
gi|333013974|gb|EGK33335.1| tRNA-processing ribonuclease BN [Shigella flexneri K-227]
Length = 290
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|73540945|ref|YP_295465.1| tRNA-processing RNAse BN [Ralstonia eutropha JMP134]
gi|72118358|gb|AAZ60621.1| tRNA-processing RNAse BN [Ralstonia eutropha JMP134]
Length = 444
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 95/276 (34%), Gaps = 7/276 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVI 63
+ + A+ E +A+ ++ + LSV P + L +F +
Sbjct: 15 LQKLRALSRYALRRAGEGRLPQVAASLTFTTFLSVVPVLTVAFALLAAFPVFREFRSDIE 74
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+F L + A+GL + S + + +LN +RV
Sbjct: 75 TFLFQNLIPGNVSESISRYLGQFSKSARGLTAMGLGGLMLTSVLTMLTVEDALNGIWRVK 134
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L+ + + V + V + A P +
Sbjct: 135 QRRPFAQRVLMFWAVLTFGPVLIGASLSVSSYLISVSAGYVGNMPIG------LGLLVSA 188
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + F++ +P A + + + I++ F ++I TY+ +Y
Sbjct: 189 TPIVLSALAFAFLYTAVPNAYVEWRDAIAAGLVAAIAFEFAKRGFGYFITHIPTYTAVYG 248
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A++ L+++Y+ + +LGA + A++ +
Sbjct: 249 TFAALPIFLLWIYLSWLVTLLGATIAANLPVVRQGH 284
>gi|325922977|ref|ZP_08184686.1| tRNA-processing RNAse BN [Xanthomonas gardneri ATCC 19865]
gi|325546536|gb|EGD17681.1| tRNA-processing RNAse BN [Xanthomonas gardneri ATCC 19865]
Length = 425
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHGVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRY 283
>gi|207724035|ref|YP_002254433.1| ribonuclease bn protein [Ralstonia solanacearum MolK2]
gi|206589243|emb|CAQ36205.1| ribonuclease bn protein [Ralstonia solanacearum MolK2]
Length = 436
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 101/273 (36%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--D 64
+ ++ A+ E+ +A ++ + +LS+ P + L Q I
Sbjct: 15 KLRALLRYALRRAGEDSLPQVAGSLTFTTVLSLVPVLTVAFALFTAFPMFQSFRAAIESY 74
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 75 LFSNLVPGNISRPILTYLNQF-SHNAKGLTAAGLVGLVVTSVMTMLTIENALNAIWRVHQ 133
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R L+ + V V + V + A P +
Sbjct: 134 RRPLTQRVLVFWALVSFGPVLIGASLSVSSYLVSISAGYVAKLPYG------LGVVVGMV 187
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 188 PILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGT 247
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ I
Sbjct: 248 FAALPIFLLWIYVSWLVTLLGATIAATLPIVRQ 280
>gi|257893552|ref|ZP_05673205.1| ribonuclease BN [Enterococcus faecium 1,231,408]
gi|314940015|ref|ZP_07847208.1| YihY family protein [Enterococcus faecium TX0133a04]
gi|314941893|ref|ZP_07848757.1| YihY family protein [Enterococcus faecium TX0133C]
gi|314952420|ref|ZP_07855426.1| YihY family protein [Enterococcus faecium TX0133A]
gi|314993211|ref|ZP_07858591.1| YihY family protein [Enterococcus faecium TX0133B]
gi|314997801|ref|ZP_07862713.1| YihY family protein [Enterococcus faecium TX0133a01]
gi|257829931|gb|EEV56538.1| ribonuclease BN [Enterococcus faecium 1,231,408]
gi|313588173|gb|EFR67018.1| YihY family protein [Enterococcus faecium TX0133a01]
gi|313592292|gb|EFR71137.1| YihY family protein [Enterococcus faecium TX0133B]
gi|313595463|gb|EFR74308.1| YihY family protein [Enterococcus faecium TX0133A]
gi|313599318|gb|EFR78163.1| YihY family protein [Enterococcus faecium TX0133C]
gi|313640748|gb|EFS05328.1| YihY family protein [Enterococcus faecium TX0133a04]
Length = 326
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + + + + ++ LLS+FP I+ N+ FL Q TV+ +
Sbjct: 15 RFIETTQKRITDSEMSTTSVVVAYYLLLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREV 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + I I +L + GL ++SALAA + +S + AL+I++N+AY V +++
Sbjct: 73 IPETVYQFIGPAIKDLLTQSSGGLLSVSALAALWSASQSINALQIAMNKAYGVENRKNFL 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I R S ++L + + ++ V L L ++ N + + T++AL
Sbjct: 133 IVRFFSLIVIVLFMIAISGVTIVLGLGQLILDAIQPIVQIPVNFIDQFQTLKWPITLVAL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ + ++L +P A+ K+ +I+PG IF + W++ + +F+ Y F+T + Y + S +
Sbjct: 193 FVIMFLIYLIVPNAQLKLKTIIPGTIFATVGWMLLSQVFSIYARYFATRISGYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILG +NA + Y +
Sbjct: 253 VLMLWLNFAATIIILGGIINAVVQEYVTGHQ 283
>gi|241765077|ref|ZP_04763069.1| ribonuclease BN [Acidovorax delafieldii 2AN]
gi|241365314|gb|EER60136.1| ribonuclease BN [Acidovorax delafieldii 2AN]
Length = 416
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 97/258 (37%), Gaps = 9/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
E F E+ AS ++ + +L++ PF+ + + V+ +V P+ I
Sbjct: 33 ERFREDRLGLTASSLTFTTVLALVPFVTVALAVFTAFPIFGKLQGVLQRWLVDSLVPDSI 92
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ + + Q A A L + + + +LN +RV +R LI
Sbjct: 93 SRQVLGYLTQF-AAQASRLGVAGVSVLLVTALALILTIDRTLNNIWRVRRLRPLGQRVLI 151
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L V L + + A + + P + L G+
Sbjct: 152 YWAAITLGPVVLGASLALTSYVMSASGGLVRAVPDG------VRLLFDSIEFFVLAAGMA 205
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P K G +F + + + Y+ TYS +Y A++ LV+
Sbjct: 206 ALYHYVPNTPVKWQHAWAGGLFVAVCIELAKKVLAIYLGKVPTYSVVYGTFATLPILLVW 265
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 266 IYVAWVIVLLGAVVTAYL 283
>gi|288559248|sp|Q31UA7|YIHY_SHIBS RecName: Full=UPF0761 membrane protein yihY
Length = 290
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y+ K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYHKLKQ 280
>gi|262377264|ref|ZP_06070488.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter lwoffii
SH145]
gi|262307717|gb|EEY88856.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter lwoffii
SH145]
Length = 415
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 101/275 (36%), Gaps = 4/275 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYEKHWFQFVLFVLRRFETDRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + D+ L + L I L + + ++ NR +
Sbjct: 69 QQLQQLIYSNFLPKTTIAFDKALNAFTDKSSNLTIIGILFLFVTTVLMLSSIETVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R + + + + L + L + + F + ++W
Sbjct: 129 RVTETRGGIMGFMRYWTIISLGPILLGSAFVISSTVASMSILSNNFAGYELDGAFVLWAI 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
T+L FI ++ +P + S +F+ + + + LF + + F++Y
Sbjct: 189 SFSLTVLGFFI----LNWTIPNRSVPLKSAFIAGLFSAVVFELLKNLFGYIMSNFTSYEI 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y A++ L+++Y+ + +LG E++ ++ +
Sbjct: 245 VYGAFAAVPIFLLWIYLSWIIVLLGVEISYALTAF 279
>gi|29827757|ref|NP_822391.1| ribonuclease BN family membrane protein [Streptomyces avermitilis
MA-4680]
gi|29604858|dbj|BAC68926.1| putative membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 339
Score = 138 bits (347), Expect = 1e-30, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 101/271 (37%), Gaps = 3/271 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ +D A+ ++ A+L++ P ++ +L G + + + +I V P
Sbjct: 63 LRRTPVSMWRDDVSDWAAALTYYAILALLPAMLMAVSLIGLV-SPRVTDDLIAHVTAWAP 121
Query: 72 EVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + L ++A + +S+ + R +L+ + + + R
Sbjct: 122 AESGNTLHGSLRHLAGERSAALTVAIGGGVSALWSASSYLAVFRRALHAQHGIEDTRPAL 181
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
T + L + + + V L + + G R A + +
Sbjct: 182 RTAPRILLTAVTLLALLFVSALLLVLSGSLLEALGRRAGLGGAGAAAWTLLRWPALLALV 241
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ + P ++ LPG + + W+ + FT Y YS +Y LA ++
Sbjct: 242 ALLVLVLFRTGPREVRELRHALPGGMLAALLWLTASAGFTAYASGLGAYSKLYGSLAGVI 301
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LV+L++ + + GA+ A + +
Sbjct: 302 VFLVWLWVSNLALLAGAQFTAELTRAERAAQ 332
>gi|295095034|emb|CBK84124.1| tRNA-processing RNAse BN [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 293
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 102/276 (36%), Gaps = 10/276 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ + E++ +A +++ +LLS+ P + L V +
Sbjct: 14 RPLRAWLKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSAFPMFADVSMQLRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
VF + I + I Q +A +K + + A + + ++ +LN +R +
Sbjct: 74 FVFANFIPATGDVIQNYIEQFVANSSK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKK 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+R + + + + L + + + +L +I N
Sbjct: 133 VRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WATDLNSVIDNVLRIF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ ++ ++ +P + + G + + + +G F YI F +Y +Y
Sbjct: 185 PLILSWLSFWLLYSVVPTTRVPNRDAVVGALVAALLFELGKKGFALYITMFPSYQLIYGV 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I V++Y +LGAE+ ++ +Y KK
Sbjct: 245 LAVIPILFVWVYWTWCIVLLGAEITVTLGVYRELKK 280
>gi|21241707|ref|NP_641289.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
axonopodis pv. citri str. 306]
gi|32699643|sp|Q8PNV2|Y937_XANAC RecName: Full=UPF0761 membrane protein XAC0937
gi|21107075|gb|AAM35825.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
Length = 422
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 22 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 82 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 140
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 141 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 194
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 195 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 254
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 255 LLWIYLSWVSVLLGASLASSMSAFRY 280
>gi|294626113|ref|ZP_06704720.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666019|ref|ZP_06731281.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292599562|gb|EFF43692.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604211|gb|EFF47600.1| ribonuclease BN domain fusion protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 425
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRY 283
>gi|218551132|ref|YP_002384923.1| ribonuclease BN [Escherichia fergusonii ATCC 35469]
gi|226737447|sp|B7LVG3|YIHY_ESCF3 RecName: Full=UPF0761 membrane protein yihY
gi|218358673|emb|CAQ91327.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|324111499|gb|EGC05480.1| YihY family protein [Escherichia fergusonii B253]
gi|325499413|gb|EGC97272.1| ribonuclease BN [Escherichia fergusonii ECD227]
Length = 290
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 100/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R + ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHHTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQQYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNAIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R +R + + + + L + + + +L +I N
Sbjct: 129 RSKRVRPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|218701414|ref|YP_002409043.1| ribonuclease BN [Escherichia coli IAI39]
gi|226737441|sp|B7NUY5|YIHY_ECO7I RecName: Full=UPF0761 membrane protein yihY
gi|218371400|emb|CAR19233.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
Length = 290
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNAIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|297621313|ref|YP_003709450.1| putative phosphoesterase, RecJ-like protein [Waddlia chondrophila
WSU 86-1044]
gi|297376614|gb|ADI38444.1| putative phosphoesterase, RecJ-like protein [Waddlia chondrophila
WSU 86-1044]
Length = 414
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 100/273 (36%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +F++ +I F ++ + AS ++ LLS+ PF+ +A G Q +
Sbjct: 2 RFLKYIFNVAKLSISGFFKDQCFLHASSLTFYTLLSIVPFLAVAFGVAKGFGFEQTLEDE 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ F +V+ + + V + + + F + + S+N ++V
Sbjct: 62 LHQRFSEHEQVLKLVLEFARSLLEQVEGSFITGVGVIFLFLFVMSLFWTIETSMNVIWKV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R F ++ + S V + L L +
Sbjct: 122 KKTRRPVRMLTDYFVMMIFFPFIFAVASSSMVYVTTVLHQAALESELLQKASPYFFMFYK 181
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ +++ + +F+P K + L I ++ + + + + S YS +Y
Sbjct: 182 GLALVMIWLLFAALFIFMPNKKVEWKYGLIAGILAGSAYYLIQQVMIIFQIGVSQYSAIY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
A++ L++L + V ++GA++ +
Sbjct: 242 GSFAALPIFLLWLQISWVTVLMGAQVAYHLEHL 274
>gi|262373473|ref|ZP_06066751.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter junii
SH205]
gi|262311226|gb|EEY92312.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter junii
SH205]
Length = 416
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 100/275 (36%), Gaps = 4/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
F I + F + A ++ + L +V P + + + A + +
Sbjct: 15 KTWFQFIVFVLRRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPARQQLQQ 74
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + D+ L + L I L + + ++ NR +RV E
Sbjct: 75 LIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNRIWRVKET 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + + + + L + L + + F + LI+ +
Sbjct: 135 RTGLVGFMRYWTIISLGPIVLGSAFVLSSTVASMNVLSNNFAGYQLDGALIL----WLIS 190
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ +G ++ +P I S + F+ + + LF + F++Y +Y
Sbjct: 191 FILTIVGFFILYWTIPNRTVPIFSAVIAACFSATVFEILKHLFGWIMSNFTSYEIVYGAF 250
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L+++Y+ +LG E++ ++ ++ K+
Sbjct: 251 AAVPIFLLWIYLSWNIILLGVEVSYALTAFHSGKE 285
>gi|74314388|ref|YP_312807.1| ribonuclease BN [Shigella sonnei Ss046]
gi|123615669|sp|Q3YV90|YIHY_SHISS RecName: Full=UPF0761 membrane protein yihY
gi|73857865|gb|AAZ90572.1| tRNA processing exoribonuclease BN [Shigella sonnei Ss046]
gi|323167513|gb|EFZ53220.1| YihY family protein [Shigella sonnei 53G]
Length = 290
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLFSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|325914257|ref|ZP_08176607.1| tRNA-processing RNAse BN [Xanthomonas vesicatoria ATCC 35937]
gi|325539512|gb|EGD11158.1| tRNA-processing RNAse BN [Xanthomonas vesicatoria ATCC 35937]
Length = 425
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAAAMAMAAYVFALPLFRTTEGQWLAGFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMSAFRY 283
>gi|323698038|ref|ZP_08109950.1| ribonuclease BN [Desulfovibrio sp. ND132]
gi|323457970|gb|EGB13835.1| ribonuclease BN [Desulfovibrio desulfuricans ND132]
Length = 461
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 103/271 (38%), Gaps = 4/271 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++Y F+++ A+ ++ + +LS+ PF+ +++ G
Sbjct: 31 RIWRGACRLVYLIGFSFIKDQTIIRAAALTFTTILSIVPFLAVAFSISKGFGFQNTGK-- 88
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + + I + + L + + + + V + + N + V
Sbjct: 89 MRDLILHLTTGQPEVADKIIEYIDRTNVQALGWVGVVTLLFTVLSLVGTIEKAFNVIWSV 148
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ RS + F +L + L + S ++ + +L + +
Sbjct: 149 DKGRSAWRRITDFFPIILFGPIFLFVASSFNFSLQN--QEMISRVMSLKAIGYLETAFLK 206
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L + + ++ F+P + ++ + + G + + W + L+ ++ + Y+ +Y
Sbjct: 207 TVPYLLIIMAFSMMYAFIPNTRVRLRAAIIGGVVGGVLWQMAQWLYINWQIGAVKYNAIY 266
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
A + LV++Y+ V +LGA+++ +
Sbjct: 267 GSFAQLPLLLVWIYLSWVIVLLGAQVSHAWQ 297
>gi|17230885|ref|NP_487433.1| hypothetical protein alr3393 [Nostoc sp. PCC 7120]
gi|17132488|dbj|BAB75092.1| alr3393 [Nostoc sp. PCC 7120]
Length = 314
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 98/282 (34%), Gaps = 11/282 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
++ + +A + + ++ +A+ ++ + S+ P ++ +AG G ++
Sbjct: 15 LKAIWQLFQEAFQEWNDDKASRLAAALAYYTVFSIAPLLIIVIAIAGAVFGEEAARGEIV 74
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G A+ I I V IS ++ L+ SLN + V
Sbjct: 75 QQIQGLVGRDGAEFIETAIQNVDRPKTGTIASLISIALLLLGATGVFIELQDSLNTIWEV 134
Query: 123 VEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + R +SFG VL L++ + + + Y P + +
Sbjct: 135 QPKPGRGVKNIFRQRFLSFGMVLGIGFLLLVSLVISTVLSTLVNYFGGLLPGVD---FLW 191
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + LP + +L G I T I + +G L Y+ +
Sbjct: 192 QLVNFIISFAITTLLFALIFKVLPDVRITWNDVLVGAILTSILFSIGRFLLGQYLGN-AG 250
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y S++ L ++Y GAE Y R+
Sbjct: 251 FGSAYGAAGSVVLILAWVYYTAQILFFGAEFTQVYARKYGRR 292
>gi|126462086|ref|YP_001043200.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
gi|126103750|gb|ABN76428.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
Length = 324
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 120/273 (43%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + + + G
Sbjct: 30 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPALAAFVSLYGLFADPAVIAEQAESLRGV 89
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+++ + + + L +S L A + +++G++AL ++N A+ E R
Sbjct: 90 IPAEGLDLLTEQLRTLASGESSSLTFSFVLSFLIAFWSANSGMKALIEAMNIAHEEREKR 149
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A V V M + + V F ++W R +
Sbjct: 150 SFVKLTLLSFALTLGAMVLAVTM----IVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLL 205
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ + + G + W++ ++ FT Y+ F+ YS Y L
Sbjct: 206 LLVATAMAGLYRWAPSRNAPEWRWVTWGSGLATLVWLIASIAFTIYLENFANYSATYGSL 265
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ L+++++ + I+GAE+N+ M R
Sbjct: 266 GALVGLLLWVWIAVMILIVGAEVNSEMEHQTAR 298
>gi|239832980|ref|ZP_04681309.1| YihY family protein [Ochrobactrum intermedium LMG 3301]
gi|239825247|gb|EEQ96815.1| YihY family protein [Ochrobactrum intermedium LMG 3301]
Length = 306
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 129/280 (46%), Positives = 184/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ + I +D I HF +DGWA ASHI+LS L+++FPF++F LA FLG +F
Sbjct: 21 MRKIRRFLRQITWDVIGHFSSDDGWAFASHIALSGLMALFPFLIFATTLASFLGTKEFAD 80
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E++ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 81 TAVHVIFDMWPSNIAAPIANEVMNVLTVQRSGLLTLSVIAAAYFASNGVEALRIALNRAY 140
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 141 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A+ F Y+ TF+ Y T
Sbjct: 201 RYTVAVAVLVLALFMVHIWLPAGRRSLGDILPGILVTLIAWLAAAMAFAKYLETFANYVT 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 261 TYAGLASIMVAIVFLYMLSAIFIIGAEINAAIMIFRKREQ 300
>gi|15893462|ref|NP_346811.1| T-RNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|15022998|gb|AAK78151.1|AE007530_2 T-RNA-processing ribonuclease BN [Clostridium acetobutylicum ATCC
824]
gi|325507577|gb|ADZ19213.1| T-RNA-processing ribonuclease BN [Clostridium acetobutylicum EA
2018]
Length = 273
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 126/265 (47%), Gaps = 2/265 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ D I F E+D A+ S ++ +LS FPFI+F L G+ + ++ V+
Sbjct: 3 RLLLDLISRFNEDDVPALGSQLAYYLVLSFFPFIIFIMTLIGYTSLNN--KEILMVLSRI 60
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE I + +V++ L ++S + + +S G A+ LN+AY V E R++
Sbjct: 61 MPESAFNLIHAAVAEVISTKHSQLMSLSLVLTIWSASAGFTAVIKGLNKAYGVQEARNFI 120
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R +S + + ++ M F+ + + L Y+ ++ + R +
Sbjct: 121 KVRFVSILCTIGVAFIILTMMFLLILGRIILNYLAYKLGFSHKVIAVWEAVRYLIFVSTA 180
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ + P K + +LPG +F+ ++ ++ + F +Y+ F+ YS +Y + +I+
Sbjct: 181 IFIFTALYRYAPCKKLMWIEVLPGSLFSTLNLILASFGFAYYVNNFANYSVIYGSIGAII 240
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
L +L+++ V ILG E+NA +
Sbjct: 241 ILLTWLFLVAVIVILGGEINAVLSQ 265
>gi|117626154|ref|YP_859477.1| ribonuclease BN [Escherichia coli APEC O1]
gi|166199577|sp|A1AI63|YIHY_ECOK1 RecName: Full=UPF0761 membrane protein yihY
gi|115515278|gb|ABJ03353.1| tRNA processing exoribonuclease BN [Escherichia coli APEC O1]
gi|323949375|gb|EGB45264.1| YihY family protein [Escherichia coli H252]
Length = 290
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISAYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|295702560|ref|YP_003595635.1| YihY family protein [Bacillus megaterium DSM 319]
gi|294800219|gb|ADF37285.1| YihY family protein [Bacillus megaterium DSM 319]
Length = 279
Score = 137 bits (346), Expect = 1e-30, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 2/275 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
Y + + + ++ ++++ ++ LLS+FPF++F L GFL ++
Sbjct: 5 YINNIVRFGKELMGRIHRDELPSLSAELAYYLLLSLFPFLIFLITLIGFLPLEST--DLL 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D+V P+ I + ++ + L + +A + +SNG+ A+ + NRAY V
Sbjct: 63 DLVENVAPQQTLHMIESNVSHIIGSHNEKLLSFGIIATMWSASNGINAIVRAFNRAYHVQ 122
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + R ++ +++ + V + Y+ F L + R
Sbjct: 123 ENRPFLVARGMAVLLTFAMIFVIIVALLLPVFGHMIGLYLSSTFGFSETFLALWSASRWI 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L LF ++ F P K I +++ G F + W V ++LF +Y+ F+ Y+ Y
Sbjct: 183 ISGLILFTVFTGLYYFAPNKKLLIRNVVKGAAFATVGWTVVSMLFAYYVNHFNNYTATYG 242
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L I+ L++LY+ G+ ++G E+NA +
Sbjct: 243 SLGGIIILLIWLYLSGMIIVIGGEINAIFYDRRVK 277
>gi|83748282|ref|ZP_00945307.1| Ribonuclease BN [Ralstonia solanacearum UW551]
gi|207742928|ref|YP_002259320.1| ribonuclease bn protein [Ralstonia solanacearum IPO1609]
gi|83725014|gb|EAP72167.1| Ribonuclease BN [Ralstonia solanacearum UW551]
gi|206594323|emb|CAQ61250.1| ribonuclease bn protein [Ralstonia solanacearum IPO1609]
Length = 441
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 101/273 (36%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--D 64
+ ++ A+ E+ +A ++ + +LS+ P + L Q I
Sbjct: 15 KLRALLRYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFQSFRAAIESY 74
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 75 LFSNLVPGNISRPILTYLNQF-SHNAKGLTAAGLVGLVVTSVMTMLTVENALNAIWRVHQ 133
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R L+ + V V + V + A P +
Sbjct: 134 RRPLTQRVLVFWALVSFGPVLIGASLSVSSYLVSISAGYVAKLPYG------LGVVVGVV 187
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 188 PILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGT 247
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ I
Sbjct: 248 FAALPIFLLWIYVSWLVTLLGATIAATLPIVRQ 280
>gi|284923988|emb|CBG37087.1| tRNA-processing ribonuclease BN [Escherichia coli 042]
Length = 290
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFVLYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|294497189|ref|YP_003560889.1| YihY family protein [Bacillus megaterium QM B1551]
gi|294347126|gb|ADE67455.1| YihY family protein [Bacillus megaterium QM B1551]
Length = 279
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/275 (22%), Positives = 124/275 (45%), Gaps = 2/275 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
Y + + + ++ ++++ ++ LLS+FPF++F L GFL ++
Sbjct: 5 YMNNIVRFGKELMGRIHRDELPSLSAELAYYLLLSLFPFLIFLITLIGFLPLEST--DLL 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D+V P+ I + ++ + L + +A + +SNG+ A+ + NRAY V
Sbjct: 63 DLVENVAPQQTLHMIESNVSHIIGSHNEKLLSFGIIATMWSASNGINAIVRAFNRAYHVQ 122
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + + R ++ +++ + V + Y+ F L + R
Sbjct: 123 ENRPFLVARGMAVLLTFAMIFVIIVALLLPVFGHMIGLYLSSTFGFSETFLALWSASRWI 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L LF ++ F P K I +++ G F + W V ++LF +Y+ F+ Y+ Y
Sbjct: 183 ISGLILFTVFTGLYYFAPNKKLLIRNVVKGAAFATVGWTVVSMLFAYYVNHFNNYTATYG 242
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L I+ L++LY+ G+ ++G E+NA +
Sbjct: 243 SLGGIIILLIWLYLSGMIIVIGGEINAIFYDRRVK 277
>gi|218887767|ref|YP_002437088.1| ribonuclease BN [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758721|gb|ACL09620.1| ribonuclease BN [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 561
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 106/272 (38%), Gaps = 4/272 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + A FV++ AS ++++ +LS+ PF+ ++ LG H T
Sbjct: 33 RRGLVWLVRRAFLAALGFVDDQCLLRASALTMTFVLSMVPFLAVVFSITKGLGVHNAEAT 92
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + + V A + +SA + + + S N ++
Sbjct: 93 QMLLLR--LAAGNPDTVARILEYVERTSAGRMGAVSAAFLLVTAGMLMANIERSFNAIWK 150
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS + F +L+ + + + ++ V + + +
Sbjct: 151 VRQGRSAWRKFTDFFSVMLVCPLLMGTAFTLGASLR--SGKVLGRLLEVAPVGAVYLLLL 208
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +F+ L+F++ ++P + + + + G + ++W + + F++Y +
Sbjct: 209 KLVPLFMVFVVLLFLYSYIPNTRVRPRAAMAGALLAAMAWQGAEYAYMVWQARFASYGLI 268
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y A + L++LY+ + G E+ ++
Sbjct: 269 YGSFAQVPLFLMWLYVSWAVVLFGVEVCHAVQ 300
>gi|258620385|ref|ZP_05715423.1| tRNA processing ribonuclease BN [Vibrio mimicus VM573]
gi|262170328|ref|ZP_06038006.1| ribonuclease BN [Vibrio mimicus MB-451]
gi|258587264|gb|EEW11975.1| tRNA processing ribonuclease BN [Vibrio mimicus VM573]
gi|261891404|gb|EEY37390.1| ribonuclease BN [Vibrio mimicus MB-451]
Length = 309
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 86/269 (31%), Gaps = 6/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + A +++ LLS+ P + ++ VI
Sbjct: 20 RYLLTRMKHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFSIFASAGDVIQDFVITHFV 79
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A + L + + + + + +LN +RV R +
Sbjct: 80 PAAGEVVKTALVEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQRKRRAVFSF 139
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + L + + I L + + F
Sbjct: 140 SMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGAYNLFLRWLPFVLSFCA 193
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++L +P K ++ + G + + + + F YI F +Y +Y LA+I
Sbjct: 194 FVGLYLLVPNKKVRLPHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIPILF 253
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ + ++GAE+ A++ P
Sbjct: 254 VWVYLCWLIVLVGAEVTAALGEREHWSDP 282
>gi|120555963|ref|YP_960314.1| putative ribonuclease BN [Marinobacter aquaeolei VT8]
gi|120325812|gb|ABM20127.1| tRNA-processing RNAse BN [Marinobacter aquaeolei VT8]
Length = 451
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 49/264 (18%), Positives = 102/264 (38%), Gaps = 2/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
Y I + A + + LLS+ P + ++ LG HQ + + F
Sbjct: 37 RSAYALIRDVISGQLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQRMEPFLYQFFQP 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + V + L ++ Y + V+ + S N +RV EMRS
Sbjct: 97 MGPQGVEVAERILGFVDNMKVGVLGSVGLALLVYTVISLVQKIERSFNMIWRVPEMRSMA 156
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++ + +V S + V + + + + A+ +I + +
Sbjct: 157 QRFSNYLSVIMVGPLLMV--SAIGVTATIFSSEIAQNLMAIEPFGSLIVLASRFTPFFLV 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FV++F+P + K+ + +SW G +LF ++ + Y+ +Y+G A +
Sbjct: 215 VGAFTFVYIFIPNTRVKLRYAFIAGLVAGVSWQAGGMLFASFVAGSAKYAAIYSGFAVGI 274
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++ Y+ + +LGA L +
Sbjct: 275 ILLIWTYLNWMILLLGASLAFYLQ 298
>gi|262380305|ref|ZP_06073459.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|262297751|gb|EEY85666.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 414
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 101/273 (36%), Gaps = 4/273 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
F I I F + +A ++ + L ++ P + + + A + +
Sbjct: 13 KTWFKFILFVIRRFEADRCRELAGSLTYTTLFAIVPMLTVFLVIISSIQALEPARQQLQQ 72
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + D++L + L I L + + + + NR +RV E
Sbjct: 73 LIYSNFLPKSTIAFDKMLNAFTEKSSNLTVIGVLFLFVTTIMMLSTIETAFNRIWRVKET 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + + + L + L + A+ F + ++ +
Sbjct: 133 RGGIVGFMRYWTIISLGPIVLGSAFVISSALASLSILSNNFAGYEMDGAFLLS----LLS 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ G ++ +P +++ +F+ I + + LF + F++Y +Y
Sbjct: 189 IALTIAGFFIIYWTIPNRNVPMIAAALAGVFSAIVFEMLKNLFGTIMSNFTSYEIVYGAF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A+I L+++Y+ +LG E++ ++ ++ R
Sbjct: 249 AAIPIFLLWIYLSWNIVLLGVEVSFAITAFHSR 281
>gi|119776536|ref|YP_929276.1| ribonuclease BN [Shewanella amazonensis SB2B]
gi|119769036|gb|ABM01607.1| tRNA-processing RNAse BN [Shewanella amazonensis SB2B]
Length = 303
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 43/265 (16%), Positives = 97/265 (36%), Gaps = 8/265 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
+ + E+ A H++ LLS+ P + ++ Q + T+ V+
Sbjct: 1 MLHLVSRLKEDQINVRAGHLTYVTLLSLVPMVAVTMSVLSAFPVFQGIRGTIETFVYENM 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ I + + +KG + + + A+ SLN +R E R + +
Sbjct: 61 IPAAGDTVQTYINEFVKNASKG-TAVGIGFLVVVAIMLISAIDKSLNAIWRTKEKRRFMV 119
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + L V + V + ++ ++ ++
Sbjct: 120 AFSMYWMVLTLGPVLMGASIAVTSYLVSLKVLSEA------DVYGVVPMLIEKLPLMFSV 173
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ +++ +P K K + L G + + + G F Y+ TF +Y +Y LA+I
Sbjct: 174 AAFLLLYMAVPNQKVKFLHALLGALVAALLFEAGKRGFALYVTTFPSYEAIYGTLATIPI 233
Query: 251 CLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + G + A++ Y
Sbjct: 234 LFVWVYLSWTIVLFGGVIAAALPEY 258
>gi|153802917|ref|ZP_01957503.1| YihY family protein [Vibrio cholerae MZO-3]
gi|254285936|ref|ZP_04960898.1| YihY family protein [Vibrio cholerae AM-19226]
gi|124121530|gb|EAY40273.1| YihY family protein [Vibrio cholerae MZO-3]
gi|150424118|gb|EDN16057.1| YihY family protein [Vibrio cholerae AM-19226]
Length = 309
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 90/275 (32%), Gaps = 6/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI A + L + + + + + +LN +
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALVEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + I L +
Sbjct: 128 RVPQKRRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGVYNLF 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 182 LRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQL 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 242 IYGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|229524719|ref|ZP_04414124.1| ribonuclease BN [Vibrio cholerae bv. albensis VL426]
gi|229338300|gb|EEO03317.1| ribonuclease BN [Vibrio cholerae bv. albensis VL426]
Length = 309
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 90/275 (32%), Gaps = 6/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI A + L + + + + + +LN +
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + I L +
Sbjct: 128 RVQQKRRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KVLDNEALSGVYNLF 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 182 LRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQL 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 242 IYGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|227543996|ref|ZP_03974045.1| ribonuclease BN [Lactobacillus reuteri CF48-3A]
gi|300909547|ref|ZP_07127008.1| YihY family protein [Lactobacillus reuteri SD2112]
gi|227186025|gb|EEI66096.1| ribonuclease BN [Lactobacillus reuteri CF48-3A]
gi|300893412|gb|EFK86771.1| YihY family protein [Lactobacillus reuteri SD2112]
Length = 298
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 127/269 (47%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I I+H + A+ ++ LLS+FP ++ NL +G T++ + A
Sbjct: 11 FIALLIQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGIDA--KTILAYLSTAI 68
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + I I L + G+ T AL A + +S G+ A + S+N AY + E ++ +
Sbjct: 69 PESVYDFIQPLIYDFLRRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPVM 128
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++SF ++++ V + I+ ++ L ++ F + + + + R T LF
Sbjct: 129 NRIVSFVWMIVVLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYISLFSSLRWPVTFGVLF 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I L ++ F+P AK ++ L G + W+ + LF+ Y + FS Y + + +
Sbjct: 189 IALTLLYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTILFSHSVISYKTIGAFIA 248
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+V+L G +LGA LNA++ + +
Sbjct: 249 MMVWLDFSGYIIMLGAALNAALQECHEGE 277
>gi|254381013|ref|ZP_04996378.1| conserved hypothetical protein [Streptomyces sp. Mg1]
gi|194339923|gb|EDX20889.1| conserved hypothetical protein [Streptomyces sp. Mg1]
Length = 337
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 50/262 (19%), Positives = 104/262 (39%), Gaps = 6/262 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++ A+ ++ A+L++ P ++ +L G GA +I + P
Sbjct: 64 LRGTAVRLWNDNIADYAAALTYYAVLALVPALLVSVSLVGLAGA-GTRERLILDLTSYAP 122
Query: 72 EVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A+ + + + + + P+ L L+A + +S+ + R +L+ +R+ + R
Sbjct: 123 PQSAQVLREALDGLTSKPSSLWVLLVSGVLSALWSASSYLAVFRRALHTMHRLPDTRPPL 182
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I + LV + VA + G + + R ++ +
Sbjct: 183 RAAHILVLTAGVLLALLVAGAASLVATGPVARRLAAAAGHSGTEAMAL--LRWPVLLVIV 240
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ ++ PA + PG W+ + LFT Y F TYS +Y LA ++
Sbjct: 241 TALILILYRTGPAEARGVRRGFPGGALAAFLWLGASALFTLY-TQFGTYSRLYGSLAGVV 299
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
LV+L+ + + GA+ NA
Sbjct: 300 VFLVWLWFTNLALLAGAQFNAV 321
>gi|194428664|ref|ZP_03061201.1| tRNA-processing ribonuclease BN [Escherichia coli B171]
gi|194413247|gb|EDX29532.1| tRNA-processing ribonuclease BN [Escherichia coli B171]
Length = 290
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRNAIVGAFVAALLFEAGKQGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|58583238|ref|YP_202254.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|84625074|ref|YP_452446.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188575458|ref|YP_001912387.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|67460605|sp|Q5GWQ2|Y3615_XANOR RecName: Full=UPF0761 membrane protein XOO3615
gi|123521141|sp|Q2NZV5|Y3417_XANOM RecName: Full=UPF0761 membrane protein XOO3417
gi|226737463|sp|B2SQM8|Y4555_XANOP RecName: Full=UPF0761 membrane protein PXO_04555
gi|58427832|gb|AAW76869.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84369014|dbj|BAE70172.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188519910|gb|ACD57855.1| tRNA-processing ribonuclease BN [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 425
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFTNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M FI
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFI 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGVYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRY 283
>gi|221639073|ref|YP_002525335.1| Ribonuclease BN family protein [Rhodobacter sphaeroides KD131]
gi|221159854|gb|ACM00834.1| Ribonuclease BN family protein [Rhodobacter sphaeroides KD131]
Length = 322
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 120/273 (43%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + + + G
Sbjct: 28 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPALAAFVSLYGLFADPAVIAEQAESLRGV 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+++ + + + L +S L A + +++G++AL ++N A+ E R
Sbjct: 88 IPAEGLDLLTEQLRTLASGESSSLTFSFVLSFLIAFWSANSGMKALIEAMNIAHEEREKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A V V M + + V F ++W R +
Sbjct: 148 SFVKLTLLSFALTLGAMVLAVTM----IVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLL 203
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ + + G + W++ ++ FT Y+ F+ YS Y L
Sbjct: 204 LLVATAMAGLYRWAPSRNAPEWRWVTWGSGIATLVWLIASIAFTIYLENFANYSATYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ L+++++ + I+GAE+N+ M R
Sbjct: 264 GALVGLLLWVWIAVMILIVGAEVNSEMEHQTAR 296
>gi|229521815|ref|ZP_04411233.1| ribonuclease BN [Vibrio cholerae TM 11079-80]
gi|229341409|gb|EEO06413.1| ribonuclease BN [Vibrio cholerae TM 11079-80]
Length = 309
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 89/275 (32%), Gaps = 6/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLHFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI A + L + + + + + +LN +
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + I L +
Sbjct: 128 RVQQKRRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGVYNLF 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 182 LRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQL 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 242 IYGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|229495956|ref|ZP_04389680.1| ribonuclease BN [Porphyromonas endodontalis ATCC 35406]
gi|229317048|gb|EEN82957.1| ribonuclease BN [Porphyromonas endodontalis ATCC 35406]
Length = 436
Score = 137 bits (345), Expect = 2e-30, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 106/272 (38%), Gaps = 3/272 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y AI+ FV+ D + AS ++ S +L++ P + +A G +
Sbjct: 13 RRIYINSLKSLYMAIKGFVQGDLTSKASALTYSTVLAIVPMLAVLVGIAKGFGVQDAISD 72
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ I+K + + V I + Y N + + + NR +
Sbjct: 73 FLIETLPTHTAEISKSLGFVENYLSQVKGGLFLGIGLVFLLYTVFNLLSTIENAFNRIWE 132
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R++ F + L V +V+ S + +A+ K F LG++ + N
Sbjct: 133 TTKGRTFKDKVTSYFTMIFLLPVLIVLSSGITIAMTTIKNTFMKDFFLLGSMTTFLINL- 191
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + + LP K + + L +++ +L+ ++ S Y+ +
Sbjct: 192 --VPFVLTVFSFVAIFMALPNVKVRFVPALISGTLAGVAFQGFQMLYIGGMLWISRYNAI 249
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y G A+ L+++ + + + A+L ++
Sbjct: 250 YGGFAAFPLLLLWMQLTWIITLFCAKLCYAIQ 281
>gi|218560956|ref|YP_002393869.1| ribonuclease BN [Escherichia coli S88]
gi|226736461|sp|B7MI17|YIHY_ECO45 RecName: Full=UPF0761 membrane protein yihY
gi|218367725|emb|CAR05514.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
Length = 290
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 97/280 (34%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISAYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAEKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|153825509|ref|ZP_01978176.1| YihY family protein [Vibrio cholerae MZO-2]
gi|229513669|ref|ZP_04403133.1| ribonuclease BN [Vibrio cholerae TMA 21]
gi|229527333|ref|ZP_04416725.1| ribonuclease BN [Vibrio cholerae 12129(1)]
gi|254225457|ref|ZP_04919068.1| YihY family protein [Vibrio cholerae V51]
gi|297581582|ref|ZP_06943505.1| yihY family protein [Vibrio cholerae RC385]
gi|125622091|gb|EAZ50414.1| YihY family protein [Vibrio cholerae V51]
gi|149740794|gb|EDM54885.1| YihY family protein [Vibrio cholerae MZO-2]
gi|229334965|gb|EEO00450.1| ribonuclease BN [Vibrio cholerae 12129(1)]
gi|229349546|gb|EEO14502.1| ribonuclease BN [Vibrio cholerae TMA 21]
gi|297534420|gb|EFH73258.1| yihY family protein [Vibrio cholerae RC385]
Length = 309
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 90/275 (32%), Gaps = 6/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI A + L + + + + + +LN +
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + I L +
Sbjct: 128 RVQQKRRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGVYNLF 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 182 LRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQL 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 242 IYGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|262402026|ref|ZP_06078591.1| ribonuclease BN [Vibrio sp. RC586]
gi|262351998|gb|EEZ01129.1| ribonuclease BN [Vibrio sp. RC586]
Length = 309
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 86/270 (31%), Gaps = 6/270 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
V + + A +++ LLS+ P + ++ V VI
Sbjct: 13 RQVVHFGRYLLIRMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFSIFANVGDVIQD 72
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A + L + + + + + +LN +RV
Sbjct: 73 FVITHFVPAAGEVVKTTLMEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQRK 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + + + L + + I L +
Sbjct: 133 RRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGAYNLFLRWLP 186
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + ++L +P K + + G + + + + F YI F +Y +Y L
Sbjct: 187 FVLSYCAFVGLYLLVPNKKVHLNHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGAL 246
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
A+I V++Y+ + ++GAE+ A++
Sbjct: 247 AAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|260466711|ref|ZP_05812898.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
gi|259029574|gb|EEW30863.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
Length = 283
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 120/279 (43%), Positives = 168/279 (60%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++YDAI HF +DGWAMASH+++++L+++FPF++F L FLGA F
Sbjct: 1 MLRNIVALRRVLYDAIGHFNTDDGWAMASHLAITSLMALFPFLIFATTLGSFLGAQAFAD 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + +VF WP+ IAKPI E+L VL V L T L AAYF+SNG+EALR SLNRAY
Sbjct: 61 TAVHLVFDTWPDQIAKPIAHEVLNVLTVRRTDLLTYGVLLAAYFASNGIEALRTSLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R R+ S +VL+A+ + +S + V PL F + I
Sbjct: 121 RVTETRGIIYRRVQSIFFVLIATAGFLAISVLLVFAPLLARLAEAHFEWIKPYTGTITLW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + GL VH +LPA K + +S++PG+IFT +W++G+ +F Y+ FS+Y T
Sbjct: 181 RYVIASAVIIGGLFAVHYWLPAGKRRFVSLVPGIIFTLAAWLIGSTIFATYLDHFSSYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLASIM +VFLY++ FILG ELNA++ Y +
Sbjct: 241 TYAGLASIMIAVVFLYIVSAIFILGGELNAAISRYLEAR 279
>gi|332558089|ref|ZP_08412411.1| Ribonuclease BN family protein [Rhodobacter sphaeroides WS8N]
gi|332275801|gb|EGJ21116.1| Ribonuclease BN family protein [Rhodobacter sphaeroides WS8N]
Length = 322
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 120/273 (43%), Gaps = 8/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI E+ +A+ ++ LL++FP + +L G + + + G
Sbjct: 28 DIALRVWRSIDEDRVMLVAAGVTFYLLLALFPALAAFVSLYGLFADPAVIAEQAESLRGV 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +T+++ + + + L +S L A + +++G++AL ++N A+ E R
Sbjct: 88 IPAEGLDLLTEQLRTLASGESSSLTFSFVLSFLIAFWSANSGMKALIEAMNIAHEEREKR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+SF L A V V M + + V F ++W R +
Sbjct: 148 SFVKLTLLSFALTLGAMVLAVTM----IVAVAVVPAVLAVFDLGSVATAVVWLVRWPLLL 203
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + ++ + P+ + + G + W++ ++ FT Y+ F+ YS Y L
Sbjct: 204 LLVATAMAGLYRWAPSRNAPEWRWVTWGSGLATLVWLIASIAFTIYLENFANYSATYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ L+++++ + I+GAE+N+ M R
Sbjct: 264 GALVGLLLWVWIAVMILIVGAEVNSEMEHQTAR 296
>gi|170695903|ref|ZP_02887043.1| ribonuclease BN [Burkholderia graminis C4D1M]
gi|170139201|gb|EDT07389.1| ribonuclease BN [Burkholderia graminis C4D1M]
Length = 437
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 98/273 (35%), Gaps = 5/273 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
+ + A + E+ +A ++ + +L++ P L F ++
Sbjct: 9 LDTLKRLAQFAAKRSSEDRIAQVAGSLTFTTMLALVPLATVAFALFTAFPLFSSFQESLQ 68
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + L A AKGL TI + + + + N +RV
Sbjct: 69 FFLADHLMPAQLNSQIFKYLNQFASKAKGLTTIGMVLLFLTGVMTMMTIESAFNVIWRVR 128
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + + F A + +I
Sbjct: 129 KARPIAQRILVYWAIITLGPILIGVSLSISSYLFTQSM----TFSAAQRMTPVIEFALAG 184
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A + + ++++LP + + + G + I++ + F +Y+ TY+ +Y
Sbjct: 185 AALPLTALAFTILYVYLPNCRVEWRDAVIGGLTAAIAFELAKRGFGYYVRRMPTYTAVYG 244
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+++ L+++Y+ + GA + +++
Sbjct: 245 AFSAVPLFLLWMYLCWFITLAGAMIASALPAIR 277
>gi|89054703|ref|YP_510154.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88864252|gb|ABD55129.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 307
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 102/266 (38%), Gaps = 8/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ E+ + + ++ LL++FP I + G + + +FG P+
Sbjct: 16 RLRDDIAEDRVCLIVAGVAFYGLLALFPNITALIAVNGLPVEPSAIVDQLRSLFGVVPQE 75
Query: 74 IAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ ITD+ + G L A Y +S G+ +L +N AY E R +
Sbjct: 76 LIAIITDQATAIAGSREDGFGLAVVTGVLVALYSASKGMSSLMEGINIAYDEHEKRGFIR 135
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L +F + + LVI + P AL G + +I G A +
Sbjct: 136 LKLATFAQTIFLILGLVITLLAMLGRPAALGIAD----LGGVVEPLISIGLFLALPVLTM 191
Query: 191 IGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+GL ++ + P+ G I + + + F Y+ F +Y+ LA +
Sbjct: 192 LGLSVLYPYAPSRDEPEWKWASLGRIERCLLRLAASAGFPFYVSNFGSYNDGIGALAGDI 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
L + ++ + GAELNA + +
Sbjct: 252 VVLTWFWISAFIILKGAELNAELEAH 277
>gi|13473007|ref|NP_104574.1| hypothetical protein mll3481 [Mesorhizobium loti MAFF303099]
gi|14023755|dbj|BAB50360.1| mll3481 [Mesorhizobium loti MAFF303099]
Length = 310
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 117/277 (42%), Positives = 167/277 (60%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++YDA+ HF +DGWAMASH+++++L+++FPF++F L FLGA F T
Sbjct: 30 RNIVALRRVLYDALGHFNTDDGWAMASHLAITSLMALFPFLIFATTLGSFLGAQAFADTA 89
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +VF WP+ IAKPI E+L VL V L T L AAYF+SNG+EALR SLNRAYRV
Sbjct: 90 VHLVFDTWPDQIAKPIAHEVLNVLTVRRTDLLTYGVLLAAYFASNGIEALRTSLNRAYRV 149
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R R+ S +VL+A+ + +S + V PL F + I R
Sbjct: 150 TETRGIIYRRVQSIFFVLIATAGFLAISVLLVFAPLLARLAEAHFEWIKPYTGTITLWRY 209
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ GL VH +LPA K + +S++PG++FT +W++G+ +F Y+ FS+Y T Y
Sbjct: 210 VIASAVIIGGLFAVHYWLPAGKRRFVSLVPGIVFTLAAWLIGSTMFATYLDHFSSYVTTY 269
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
AGLASIM +VFLY++ FILG ELNA++ Y +
Sbjct: 270 AGLASIMIAVVFLYIVSAIFILGGELNAAISRYLEAR 306
>gi|319781313|ref|YP_004140789.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317167201|gb|ADV10739.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 283
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 119/279 (42%), Positives = 169/279 (60%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++YDA+ HF +DGWAMASH+++++L+++FPF++F LA FLGA F
Sbjct: 1 MLRKIVALKRVLYDALGHFNTDDGWAMASHLAITSLMALFPFLIFATTLASFLGAQAFSD 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + +VF WPE IAKPI E+L VL V L T + AAYF+SNG+EALR SLNRAY
Sbjct: 61 TAVHLVFDTWPEQIAKPIAREVLNVLTVRRTDLLTYGVVLAAYFASNGIEALRTSLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E R R+ S +VL+A+ + +S + V PL + + I
Sbjct: 121 RVSETRGIIYRRVQSIIFVLIATAGFLAISVLLVFAPLLARLAEAHIDWIKPYMGTITLW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + GL VH +LPA K + +S++PG++FT +W++G+ +F Y+ FS+Y T
Sbjct: 181 RYVIASAVIVGGLFAVHFWLPAGKRRFVSLVPGIVFTLAAWLIGSTIFATYLDHFSSYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YAGLASIM +VFLYM+ FILG ELNA++ Y +
Sbjct: 241 TYAGLASIMIAVVFLYMVSAIFILGGELNAAISRYLEAR 279
>gi|90581077|ref|ZP_01236877.1| ribonuclease BN [Vibrio angustum S14]
gi|90437773|gb|EAS62964.1| ribonuclease BN [Vibrio angustum S14]
Length = 303
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 46/266 (17%), Positives = 92/266 (34%), Gaps = 6/266 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D I+ + A ++ LLS+ P I + + + +
Sbjct: 15 DYFSYLIQRVNHDRLTVTAGSMAYVTLLSLVPLITVVISALSAVPVFAGLGEQLQNFVIE 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + L A + + A + + ++ SLN +R+ + R W
Sbjct: 75 NFVPAAGAVVKTYLNEFVSNAGKMTAVGIAALFVVAMMLISSIDTSLNYIWRIKKKRRWV 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I+ I + + L + L V + + ++ + L
Sbjct: 135 ISFSIYWMILTLGPILLGSSIAVSSYLGSLALLEHQALHG------LLQQSLRWFPSLMS 188
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++L +P K L G + I + + F Y+ F +Y +Y LA+I
Sbjct: 189 SLAFLLLYLLVPNCKVTFRHALIGSLSASILFELSKKGFAIYLAHFHSYQMIYGALAAIP 248
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ +LGAE+ AS+
Sbjct: 249 ILFVWIYLCWCIVLLGAEITASLGER 274
>gi|300774226|ref|ZP_07084093.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300758905|gb|EFK55734.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 322
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + E AS ++ + LL++FP I+F + ++ F +++ +
Sbjct: 34 LYTVGIFFFQEIARESILNKASSLAYNFLLAMFPAIIFLFTMIPYIPIDNFQEQLLEFLK 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + ++ GL + + AA+FS+NG+ L ++ N+A E RS
Sbjct: 94 VIIPHNAFDVIQTTLEDIIKNQNGGLLSFGFVLAAFFSTNGMHTLMLAFNKASLTTENRS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYAT 185
W RL++ V L + +F + + Y++ + II R
Sbjct: 154 WIRQRLVALALSFTIIVALTVGMGIFTFAGIVINYLKSNISVDVSWFWTFIIKAARWIIL 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
F + ++ F PA+ K PG I ++ F +YI F Y+ +Y +
Sbjct: 214 FGIYFFTVSCLYKFGPASNQKWKLFSPGATLATILAILTFSGFAYYINHFGAYNKLYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+I+ ++++Y+ + ++G ELNAS+
Sbjct: 274 GTIIVIMIWMYLNSLILLVGYELNASIA 301
>gi|254488995|ref|ZP_05102200.1| YihY family protein [Roseobacter sp. GAI101]
gi|214045864|gb|EEB86502.1| YihY family protein [Roseobacter sp. GAI101]
Length = 316
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 87/267 (32%), Positives = 147/267 (55%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + ++ +A +D + +A +++ LL+VFPF++F +++ F+G+ +
Sbjct: 31 KGWRGAWGVMREAGLRLWSDDAFGLAGNVAFRVLLAVFPFLIFTSSMTAFVGSQSMAEDL 90
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + PE + +PI E+ QV+ V G+ + L +F+ GV+ +R+ LNRAY V
Sbjct: 91 VSFLLAIVPETLIEPIVSEVKQVMTVQRGGVLSTGILLTIWFALGGVDGVRVGLNRAYGV 150
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RSWY+ + V++AS+ LV++ ++ V P A +++ FP + I R
Sbjct: 151 RETRSWYVVYPVMVLMVIIASLVLVLVGYLLVLAPRAGSWLHVLFPGFDPASVTIRLVRY 210
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A + L L H+FLPA +++ SI PGV+FT +W V FT Y+ F+TY+T Y
Sbjct: 211 PAAAIILVFSLFLAHVFLPARRTRFSSIYPGVLFTVAAWTSLTVAFTFYLANFATYATYY 270
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELN 269
GLA I+ L FLY+ + I G ELN
Sbjct: 271 GGLAGIVAALYFLYLAALVLIFGGELN 297
>gi|163790741|ref|ZP_02185168.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
gi|159874042|gb|EDP68119.1| ribonuclease BN, putative [Carnobacterium sp. AT7]
Length = 313
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 68/263 (25%), Positives = 126/263 (47%), Gaps = 2/263 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ + E + W + IS LLS+FP IV N+ + ++ + A P
Sbjct: 28 VVQKYREAEVWNSGAIISYYFLLSIFPVIVVIGNVLPYFRLDAA--ELLPYIENAVPNYF 85
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ D + + G+ +I+ + A + +S G+ A+++S+N+AY V R+ I RL
Sbjct: 86 FDQVEDVLTSWFTRSSGGILSIAVIGALWSASRGMTAMQVSMNKAYGVEPRRNIVIIRLF 145
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S L V+++++ VF L L Y+ + + R TM+ LFI
Sbjct: 146 SLILTTLLIVSIMLLVIVFGFGQLILEYITPIIDIPLTISETFQSLRWPVTMIVLFIIFC 205
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F+P AK S+LPG F+ I W++ + +F Y+ F+ + Y + + M L++
Sbjct: 206 LLYYFVPHAKIAFKSVLPGAAFSTIGWMLVSQVFAVYVEYFAIGTKSYGTIGTFMIMLIW 265
Query: 255 LYMLGVFFILGAELNASMIIYYW 277
L ++G GA +NA++ +Y
Sbjct: 266 LQVIGALMTAGAVINAAIDVYQN 288
>gi|317495128|ref|ZP_07953498.1| ribonuclease BN family protein [Gemella moribillum M424]
gi|316914550|gb|EFV36026.1| ribonuclease BN family protein [Gemella moribillum M424]
Length = 301
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 130/274 (47%), Gaps = 3/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + + ++ +++++S +LSVFP ++ L + Q ++ +
Sbjct: 21 IKKFVKEMYYRIMYDEISLLSANLSYYFILSVFPMLIVALALTPYFKIDQ--QFLLAKIQ 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + I +VL + TI + + +SNG+ + I+ N A+RV + R
Sbjct: 79 TFAPGALGDYLFNMISEVLNSKNNNTIITIGVVFTLWSASNGIYGIIIAFNNAFRVRDGR 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W +T++IS + +L + + ++ + V + F + +
Sbjct: 139 IWIVTKIISIIFTVLFLIGMFLVLALVVFGKQLTYLLFHKFNLDEGFYTMWSYLSYSFPI 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L FI +F+++ P K K +SILPG +F+ ISW + + LF +YI FS+Y Y +
Sbjct: 199 LFTFIVFVFLYILGPNLKLKSISILPGAVFSTISWTLVSRLFGYYIDHFSSYIKTYGTIG 258
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++M +++LY+ G I+GAE+NA Y +
Sbjct: 259 ALMAFIIWLYITGYILIIGAEINAIFHNYKIEHR 292
>gi|195977831|ref|YP_002123075.1| methionine aminopeptidase Map [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195974536|gb|ACG62062.1| methionine aminopeptidase Map [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 599
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 59/287 (20%), Positives = 119/287 (41%), Gaps = 10/287 (3%)
Query: 1 MREYF-----CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA 55
++++ ++ I + HF + A ++ +L+ FP IV AN+ +L
Sbjct: 290 IKKFLDKVISKWQYEPIQAFMRHFQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNI 349
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ ++ ++ P+ I + + ++ + + P+ G+ I+ L + S + +L+ +
Sbjct: 350 D--ISDLLRLMKEQLPKDIYRSASSIVVNIFSKPSGGVLGIATLTGLWTMSRSLASLQKA 407
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
N+AY E R + + L+ LL L A+ + + + N+
Sbjct: 408 FNKAYDASEHRDFLLGHLVGLLTSLLILFLLTFALIFSTFSKAAIQVLDRHYHLNDNITT 467
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ T+L +FIGL+ ++ LP K KI ILPG FT + + + +Y+V
Sbjct: 468 LFLFLIQPITILIIFIGLMLLYFLLPNIKIKKIRYILPGTFFTTFVMIFLSNMVGNYVVH 527
Query: 235 FSTYSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L I+GA NA+ K
Sbjct: 528 NVERMVDIKTFGSVMVFIIMLWFIFLARILIMGAVFNATYQELSIGK 574
>gi|323494559|ref|ZP_08099663.1| hypothetical protein VIBR0546_13332 [Vibrio brasiliensis LMG 20546]
gi|323311162|gb|EGA64322.1| hypothetical protein VIBR0546_13332 [Vibrio brasiliensis LMG 20546]
Length = 304
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 93/272 (34%), Gaps = 8/272 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGA 69
+ + A +++ LLS+ P + ++ + + D V
Sbjct: 13 FARYLLTRMGHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFAIFENAGDAIQDFVITH 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + +L+ +A + + + + + +LN +RV R
Sbjct: 73 FVPAAGDAVKGALLEFVAN-TGKMSAVGGAFLFVAALMLISNIDKNLNYIWRVKHKRRAV 131
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + + + + + L
Sbjct: 132 FSFSMYWMVLTLGPILVGASIAATSYVTSL------KILESEAISGLYNQLLRWLPFLLS 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++L +P K +I + G I + + F YI F +Y +Y LA+I
Sbjct: 186 FFAFVGLYLLVPNKKVRISHAMVGAIIAALLFEASKKGFAAYITQFPSYQLIYGALAAIP 245
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ + ++GAE+ A++ +P
Sbjct: 246 ILFVWVYLCWLIVLVGAEVTAALGEREQWSEP 277
>gi|265750543|ref|ZP_06086606.1| ribonuclease BN [Bacteroides sp. 3_1_33FAA]
gi|263237439|gb|EEZ22889.1| ribonuclease BN [Bacteroides sp. 3_1_33FAA]
Length = 439
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 90/276 (32%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I +I F + AS ++ S LLS+ P + +A G + T
Sbjct: 29 RGILYNAIKIATLSIREFTQGRILNKASALTYSTLLSIIPILAILFAIARGFGFSNLLET 88
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + + + + + + + N ++
Sbjct: 89 QFRSGLEGQSAAAETILGLIDSYLVHAKSGVFIGVGLVMLFWTILSLTYNIERTFNYIWQ 148
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R+ Y F +LL + +V+ S + + + + L ++
Sbjct: 149 VKKPRTLYRKMTDYFSILLLLPLLIVLSSGLTIFMSTMVK----NMEDFVLLAPLMKFLV 204
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + +F+P K K+ + I ++ L+ + S Y+ +
Sbjct: 205 RLVPFILTWAMFTGLFVFMPNTKVKLRYAIIPGIIAGTAFQAFQYLYIGSQIWVSRYNAI 264
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A+I L++ + + GAEL
Sbjct: 265 YGSFAAIPMFLLWAQISWGICLYGAELCYVAQNLRN 300
>gi|116334154|ref|YP_795681.1| ribonuclease BN-like family protein [Lactobacillus brevis ATCC 367]
gi|116099501|gb|ABJ64650.1| Ribonuclease BN-like family enzyme [Lactobacillus brevis ATCC 367]
Length = 303
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 58/272 (21%), Positives = 124/272 (45%), Gaps = 2/272 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + +I +H+ + A ++ LLS+FP ++ A+L +L T
Sbjct: 6 RKRASQIKHVIQTISKHYQMANVSDSAVVLAYYTLLSLFPALLVIASLLPYLNIQ--TET 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + PE I + I L + G+ +I + A + SS V A + ++N AY
Sbjct: 64 VLESIEPMVPESIFSMLKPIIHSFLNTRSGGVLSIGVIVALWSSSRAVAAFQRTVNGAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ + R+++F +++ L ++ F + L + + ++ I +
Sbjct: 124 VAKNQNALVNRIVAFFWMVALIAFLFVLMLFFSFGQIILEQLAPYLHVPHEIIGYINAAK 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T L + + L+ + F+P+AK K + PG + + W++ + F+ Y+ F
Sbjct: 184 WPVTFLVVLLVLMILLYFVPSAKLKWRFVWPGALTATVGWLLLSQAFSLYVKYFVHNMDS 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + + + + +L G+ + GA LNA++
Sbjct: 244 YRTIGTFIVLMFWLDFTGLILMFGAVLNAAIQ 275
>gi|220935818|ref|YP_002514717.1| ribonuclease BN [Thioalkalivibrio sp. HL-EbGR7]
gi|219997128|gb|ACL73730.1| ribonuclease BN [Thioalkalivibrio sp. HL-EbGR7]
Length = 439
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 96/265 (36%), Gaps = 2/265 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I + E A + + LLS+ P + ++ GAH +
Sbjct: 26 KRPLIGALRIAWGIGREVTEGQLTLRAMSLVYTTLLSMVPLLALSFSVLKAFGAHNQLEP 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + + I V + L I + Y V+ + + N +R
Sbjct: 86 LLLSLLEPLGPQGVEVAENVIGFVDNMRVGVLGFIGLIFLIYTVIALVQKIESAFNYTWR 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R +L+ V +V + +I V + + L +
Sbjct: 146 INGTRGLAQRFSNYLSVILVGPVLVVSALGITASIMATS--VMQQAMEVQLLGEAVQLAG 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + +FV++F+P + K++ L G + + W +F + + Y+ +
Sbjct: 204 RMVPYLLIMGAFMFVYVFVPNTRVKLLPALVGAVVAGLLWQSTGWIFAAMMAGSTRYAAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGA 266
Y+ A ++ L+++Y+ + ++GA
Sbjct: 264 YSSFAIMIMLLIWIYLSWLILLIGA 288
>gi|328957860|ref|YP_004375246.1| putative ribonuclease [Carnobacterium sp. 17-4]
gi|328674184|gb|AEB30230.1| putative ribonuclease [Carnobacterium sp. 17-4]
Length = 319
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 130/274 (47%), Gaps = 2/274 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+V I+ + E + W + IS LLS+FP +V +N+ +L ++
Sbjct: 17 IIRVVKKFGVILIQKYREAEVWNSGAIISYYLLLSIFPVMVVVSNVLPYLRLDAA--ELL 74
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ A P + + ++ + + G+ +I+ + A + SS G+ A+++S+N+AY V
Sbjct: 75 PYIENAVPTYFFHQLENLLMNWFSKSSGGILSIAVIGALWSSSRGMNAMQVSMNKAYGVE 134
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R+ I RL S + ++++ +F L L Y+ F + + R
Sbjct: 135 PRRNIVIIRLFSLILTTSLILCIMVLVIIFGFGQLILEYITPVFELPLMISETFQSLRWP 194
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T+ LFI ++ F+P AK + S+LPG + I W++ + +F Y+ F+ + Y
Sbjct: 195 VTVSVLFIIFCVLYYFVPHAKVTLKSVLPGAAISTIGWMLVSQVFAIYVEYFAFGAKTYG 254
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ + M L++L ++G GA +NAS+ +Y
Sbjct: 255 TIGTFMIMLIWLQVIGSLMTAGAVINASIEVYQN 288
>gi|289670867|ref|ZP_06491942.1| ribonuclease BN/unknown domain fusion protein [Xanthomonas
campestris pv. musacearum NCPPB4381]
Length = 416
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 98/266 (36%), Gaps = 8/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWP 71
F+++ + A+ ++ + + ++ P + + A + D +F +
Sbjct: 25 RFLWRRFLDDRLFQAAASLAYTTVFALVPLAIVVFGVLSAFPAFNEWKDALTDFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + + + L +A + ++ + N +RV R
Sbjct: 85 PGAARSVQNYLNRSLED-LGKFTVAGMVALVASLLITLHSIEQTFNSIWRVAAARPKVTR 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI + + L ++ + + + L A M F+
Sbjct: 144 FLIYWTVLTLGTMLAAASMAMAAYVFALPLFRTTEGQWLAEFAW------RLAPMAVEFV 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ +P ++ LPG + I + F Y+ F TY +Y L+++
Sbjct: 198 CIVLIYRVVPQHVVRLRHALPGALLAVILMEIVKWGFGFYLGNFQTYQRIYGALSALPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ V +LGA L +SM + +
Sbjct: 258 LLWIYLSWVSVLLGASLASSMAAFRY 283
>gi|56461547|ref|YP_156828.1| ribonuclease BN [Idiomarina loihiensis L2TR]
gi|67460627|sp|Q5QV33|Y2447_IDILO RecName: Full=UPF0761 membrane protein IL2447
gi|56180557|gb|AAV83279.1| Ribonuclease BN [Idiomarina loihiensis L2TR]
Length = 284
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 103/275 (37%), Gaps = 6/275 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ YF + + F ++ A H++ ++LS+ P +V + +
Sbjct: 7 KSYFNHTLGFLKYFGQRFNSDNTNITAGHLTYVSMLSLVPLLVVMFTVFSAFPMFDELKE 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ A + +E L A + I + + A+ +LN +R
Sbjct: 67 NLEQALFANLLPTSGEQLEEYLNEFVTNASKMTAIGVGFLFIVAIMLMSAIDKALNSIWR 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R W ++ + + + L V + + + ++ + +
Sbjct: 127 DSSSRHWLVSFAVYWMLLTLGPVLIGSGLAATSYLMSLSQFADEYVSGIQSF------VL 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ F+ + ++ +P + K G + + + + LF+ YI F TY +
Sbjct: 181 WFVPIVTSFVFFVLMYQLVPNRQVKFRYAAFGAVIAALLFELSKQLFSLYITFFPTYQAI 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y LA+I +V++Y+ + ++GA L S+ Y
Sbjct: 241 YGALATIPILIVWIYLSWLIVLIGAVLTVSLEEYQ 275
>gi|330444867|ref|ZP_08308522.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489177|dbj|GAA03019.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 302
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 94/273 (34%), Gaps = 6/273 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
++ D I+ + A ++ LLS+ P I + + +
Sbjct: 8 PRIRLMVDYFTYLIQRVNHDRLTVTAGSMAYVTLLSLVPLITVVISALSAVPVFAGLGEQ 67
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ A + L A + + A + + ++ SLN +R+
Sbjct: 68 LQNFVIENFVPAAGAVVKTYLNEFVSNAGKMTAVGIAALFVVAMMLISSIDTSLNYIWRI 127
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R W I+ I + + L + L V + + ++
Sbjct: 128 KKKRRWIISFSIYWMILTLGPILLGSSIAVSSYLGSLALLEHQALHG------LLQQSLR 181
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L + + ++L +P K L G + I + + F Y+ F +Y +Y
Sbjct: 182 WFPSLMSSLAFLLLYLLVPNCKVTFRHALIGGLSASILFELSKKGFAIYLAHFHSYQMIY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA+I V++Y+ +LGAE+ AS+
Sbjct: 242 GALAAIPILFVWIYLCWCIVLLGAEITASLGER 274
>gi|78358104|ref|YP_389553.1| ribonuclease BN [Desulfovibrio desulfuricans subsp. desulfuricans
str. G20]
gi|78220509|gb|ABB39858.1| tRNA-processing RNAse BN [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 473
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 106/275 (38%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R V +Y + FV + AS ++ + +LS+ P + +++ LG
Sbjct: 41 RRGILGVLRWLYLVVHGFVADQCLLRASALTYTTVLSIVPTLAVAFSISKGLGIQNT--E 98
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I V+ +T + V K L + LA + + + + N +
Sbjct: 99 FIRVLLMRIAAGREDTVTQILAYVDNTNVKTLGAVGLLALFVTVGSLMGTIEKAFNSIWG 158
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R+ + F L+ + + V++ + + +G +
Sbjct: 159 VARGRTLWRKFTDFFSVTLVCPIVMAAAFSFSVSLRH--ETLVQKLLNVGIVSYAYVAFL 216
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + + L F+++F+P + + S L G + + W + + Y + + Y+ +
Sbjct: 217 KMVPFLMIALMLFFIYVFIPNTRVRFGSALLGGLVAGLLWTLAEGAYVGYQIGAARYNAI 276
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y G A + L+++Y+ V +LGAE++ ++
Sbjct: 277 YGGFAQLPLFLIWVYVTWVIVLLGAEVSFAVQNVR 311
>gi|83949735|ref|ZP_00958468.1| Ribonuclease BN [Roseovarius nubinhibens ISM]
gi|83837634|gb|EAP76930.1| Ribonuclease BN [Roseovarius nubinhibens ISM]
Length = 315
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 112/264 (42%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ +++ ++ ALLS+FP + + GF G + + DV PE
Sbjct: 3 RVFGGIDRLNIGLISAGVAFYALLSLFPAVTAMVAIWGFAGDPSKLLSQFDVARQFMPEE 62
Query: 74 IAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ ++I ++ L + + + + + N AL LN YR ++
Sbjct: 63 AYLLVQEQITALIVADNTTLQWTTVISLTLSIWSAKNATAALIRGLNSIYREDHRKNPLK 122
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ ++ ++ + +A+P+ALA++ + + + + M +
Sbjct: 123 RYGVAVALTIVMIAAALVAFALVIALPVALAFLN----LGIKVEMFVSAAKWAILMGVVL 178
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ + P + + + + PG +F +W G++ F+ Y+ F +++ +Y L +++
Sbjct: 179 LCFGLLYRYGPNRRGATVSWLSPGALFALATWAAGSIAFSTYLRNFGSFNEVYGSLGALV 238
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L + Y+ ++GA +NA +
Sbjct: 239 ALLFWFYISAYVVLIGALINAELE 262
>gi|260913449|ref|ZP_05919927.1| tRNA-processing ribonuclease BN [Pasteurella dagmatis ATCC 43325]
gi|260632389|gb|EEX50562.1| tRNA-processing ribonuclease BN [Pasteurella dagmatis ATCC 43325]
Length = 316
Score = 136 bits (343), Expect = 3e-30, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 101/281 (35%), Gaps = 10/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
M F F + A +++ S +L++ P ++ ++ V
Sbjct: 1 MNNIFKNTLLFSKLFWLRFQQNKLSQAAGYLTYSTMLALVPLVMVVFSVFSAFPVFNEVT 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + I + ++ +K + + ++ + + ++ +LN
Sbjct: 61 GELKGFIFDNFAPQASDMVGQYIDEFVSN-SKQMSAVGVISLVVVALMLINSIDRTLNSI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R + I + + L + + V I L L
Sbjct: 120 WHDTTIRPLVFSFAIYWLILTLGPLLIGASIGVSSYIATMLNENISLPFGLK-------- 171
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ ++ +P K KI G + + + +G F Y+ F +Y
Sbjct: 172 LLSFVPFFLTWLIFTLIYSVVPNKKVKITHSAIGALVAAVFFTLGKQAFLWYVTNFPSYQ 231
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +A++ L+++ + V ++GA+L + + Y KK
Sbjct: 232 LIYGAMATLPIMLLWIQLSWVVILIGAQLASVLADYSLCKK 272
>gi|258624619|ref|ZP_05719555.1| tRNA processing ribonuclease BN [Vibrio mimicus VM603]
gi|262166747|ref|ZP_06034484.1| ribonuclease BN [Vibrio mimicus VM223]
gi|258583083|gb|EEW07896.1| tRNA processing ribonuclease BN [Vibrio mimicus VM603]
gi|262026463|gb|EEY45131.1| ribonuclease BN [Vibrio mimicus VM223]
Length = 309
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 85/263 (32%), Gaps = 6/263 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + A +++ LLS+ P + ++ VI
Sbjct: 20 RYLLTRMKHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFSIFASAGDVIQDFVITHFV 79
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A + L + + + + + +LN +RV R +
Sbjct: 80 PAAGEVVKTALVEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQRKRRAVFSF 139
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + L + + I L + + F
Sbjct: 140 SMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGAYNLFLRWLPFVLSFCA 193
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++L +P K ++ + G + + + + F YI F +Y +Y LA+I
Sbjct: 194 FVGLYLLVPNKKVRLPHAMAGALIAAVLFELSKKGFAAYITQFPSYQLIYGALAAIPILF 253
Query: 253 VFLYMLGVFFILGAELNASMIIY 275
V++Y+ + ++GAE+ A++
Sbjct: 254 VWVYLCWLIVLVGAEVTAALGER 276
>gi|163851653|ref|YP_001639696.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218530460|ref|YP_002421276.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
gi|163663258|gb|ABY30625.1| ribonuclease BN [Methylobacterium extorquens PA1]
gi|218522763|gb|ACK83348.1| ribonuclease BN [Methylobacterium chloromethanicum CM4]
Length = 315
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 105/277 (37%), Positives = 161/277 (58%), Gaps = 1/277 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 18 RFKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEAG 77
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 78 TLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIR 137
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 138 EARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRIG 197
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T + + L+ H F+ A + ++S+LPG++ T W + + F +Y+ FS Y++ Y
Sbjct: 198 VTAFLIALVLVIAHKFVAAGRRPVLSVLPGIVVTLCLWFLAGLGFGYYLDRFSNAYASTY 257
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 258 GGLATAMIFLVFLYWLAAMFLFGGEINGTVIAARRQR 294
>gi|254992437|ref|ZP_05274627.1| transport protein [Listeria monocytogenes FSL J2-064]
Length = 239
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 60/236 (25%), Positives = 117/236 (49%), Gaps = 2/236 (0%)
Query: 45 FGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF 104
A L +L + +V +++ P+ I + + + +L GL +I +A +
Sbjct: 1 IAATLLAYLHIDK--DSVFNMIKEFAPDQIMDFLEENLNNLLTQKNGGLLSIGIIATLWS 58
Query: 105 SSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR 164
+SNG+ A+ SLN+AY V R++ + RL+S + L T+ + V ++
Sbjct: 59 ASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTLAMLATVGATLLLLVFGQQIGMFLI 118
Query: 165 KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
+ L N R T++ +F+ F++ P +S ++S+LPG +F+ I W V
Sbjct: 119 NHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVA 178
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ F +Y+ F YS Y + I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 179 SLGFAYYVNNFGNYSATYGSIGVIIILMLWFYLTGIILMIGGELNATLAIRKKKKE 234
>gi|330466829|ref|YP_004404572.1| ribonuclease bn [Verrucosispora maris AB-18-032]
gi|328809800|gb|AEB43972.1| ribonuclease bn [Verrucosispora maris AB-18-032]
Length = 326
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 106/283 (37%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD-IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+R+ + ++ + +F+ ++ A+ ++ +L++FP V L G + +
Sbjct: 22 IRQLSWPTWRGVLIRSGRNFLRDNCTDWAAALTYYGVLALFPSTVVVVALVGLVSDGERT 81
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQV-----LAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ + + V A+ L + A + +SN + +
Sbjct: 82 VDTVLDLARGVGAGDVVGNESFVGVVRALVDQNSSARVLLSFGLFGALWSASNFIASFTR 141
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ N Y V+E R + R + G L+ V + ++ + V A G
Sbjct: 142 ASNAIYGVIEGRPMWRLRPMQIGLAALSLVLIATVAAGLIVSGPVADAVGDLIGAGGAAR 201
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIV 233
+ A + + L + P + + PG + ++W++ + F Y+
Sbjct: 202 TAWAVAKWPALAMIAMLLLSLLFWVAPNVRQPRFRWLTPGGVVALLAWMISSFGFGLYVA 261
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
F +Y Y L +++ LV+L++ +LG ++NA +
Sbjct: 262 NFGSYDATYGSLGAVIAFLVWLFLSNSALMLGVQINAELQRGR 304
>gi|134094435|ref|YP_001099510.1| putative ribonuclease BN transmembrane protein [Herminiimonas
arsenicoxydans]
gi|133738338|emb|CAL61383.1| Putative ribonuclease BN [Herminiimonas arsenicoxydans]
Length = 434
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 106/274 (38%), Gaps = 9/274 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DV 65
+ ++I A EE +A ++ +++L++ P + + +
Sbjct: 30 LRNLIRFAARRLDEERLPQVAGSLTFTSVLALVPVLTIALAIFTTFPLFNTFRASLEAYF 89
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P+ IA I + Q + A L + A+A + + + N+ +RV
Sbjct: 90 VQNLMPQGIANTILGYLTQF-STKATRLSAVGAVALIVTAVMMMLMIDRVFNQIWRVKTK 148
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R LI + V L + + + + A + P G + +
Sbjct: 149 RPIMQRILIYWAIVTLGPLLIGASMTLTSYLFTATNGAVRDIPFFGGV------LYSSIS 202
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + +++ +P + L G + I++ V LF ++V TY+ +Y +
Sbjct: 203 ILLTTVAFTSLYIVVPNRFVEWRDALCGGLLAAIAFEVVKRLFAIFVVKVPTYTVVYGAV 262
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A+ LV++Y+ + + GA + A++ I + +
Sbjct: 263 AAFPIFLVWIYLGWLITLGGAVVTAALPIVKYER 296
>gi|91224961|ref|ZP_01260220.1| ribonuclease BN [Vibrio alginolyticus 12G01]
gi|254228544|ref|ZP_04921969.1| tRNA-processing ribonuclease BN [Vibrio sp. Ex25]
gi|262392674|ref|YP_003284528.1| ribonuclease BN [Vibrio sp. Ex25]
gi|91190207|gb|EAS76477.1| ribonuclease BN [Vibrio alginolyticus 12G01]
gi|151938926|gb|EDN57759.1| tRNA-processing ribonuclease BN [Vibrio sp. Ex25]
gi|262336268|gb|ACY50063.1| ribonuclease BN [Vibrio sp. Ex25]
Length = 314
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 91/266 (34%), Gaps = 8/266 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
++ + A +++ LLS+ P + ++ V V+ +
Sbjct: 22 FFKYLLKRLTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFANVGEVLQGYIIEN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + + +A + + + + + +LN +RV + R
Sbjct: 82 FVPASGEAVHTALQEFVAN-TGKMSAVGGGFLFIAAVMLISNIDKNLNYIWRVKDKRRLV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + + L + +L
Sbjct: 141 FSFSMYWMVLTLGPIMVGASIAATSYVTSL------QILENETLSGAFNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + +++ +P K + G I + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFLGLYILVPNKKVHLAHGAMGAAVAAILFELSKKGFALYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + +LGAE+ A++
Sbjct: 255 ILFVWVYLCWMIVLLGAEVTAALGER 280
>gi|261856109|ref|YP_003263392.1| ribonuclease BN [Halothiobacillus neapolitanus c2]
gi|261836578|gb|ACX96345.1| ribonuclease BN [Halothiobacillus neapolitanus c2]
Length = 472
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 34/278 (12%), Positives = 91/278 (32%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + I + + A +S LLS+ P + ++ G+ Q +
Sbjct: 27 QRIGQRLGRIGLYMSREAFKGNLQLNAMSLSYITLLSLVPLLAVSFSVLKAFGSDQVIEP 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + V + L + + ++ + N +
Sbjct: 87 FLTTLLAPLGSSADGLTAQILTFVGNIKVGVLGAVGIAMLFFTVVTLMQKIESVFNGIWH 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V ++R + +++ V ++ + + L + + +
Sbjct: 147 VQQLRQITTRFPMYLSVLMVGPVLVLAATGLTA--SLLSNHFVTDITQHSVFRDALASVA 204
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ F++ +P + S L G + I W + F I + + Y+ +
Sbjct: 205 WLVPFMVWVAVFTFIYALVPNTSVRFSSALAGGVVAAILWNGIGLAFGSMIASSTQYTAI 264
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y+ AS++ +V+L + + +LGA ++ + +
Sbjct: 265 YSAFASLILFMVWLQLAWLIVLLGATVSYAWQNIDQLR 302
>gi|190894365|ref|YP_001984658.1| putative ribonuclease [Rhizobium etli CIAT 652]
gi|190700026|gb|ACE94108.1| putative ribonuclease protein [Rhizobium etli CIAT 652]
Length = 358
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 120/277 (43%), Gaps = 6/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ D+ + +++ +A+ ++ LL++FP + +L G + + +
Sbjct: 59 LSGLRDVFWRVYHEVLDDRITLIAAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLR 118
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYR 121
+ G P I D+I ++ L A + + +G A+ ++N AY
Sbjct: 119 ELAGLLPPGAFDLIADQIKALVEKRESTLGITFFVGLAIALWSTHSGTLAIFDAMNVAYE 178
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R + L + L A V V+M + +P+ L+Y+ LL+ W
Sbjct: 179 ENEKRGFLRLNLTGLCFTLCAMVFAVVMVVLVGVMPVMLSYLWLDQFKEHLALLLRWPLL 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ +A+ + F PA +I + G T ++W V ++ F+ Y+ F+ Y+
Sbjct: 239 LFIVAVAVTLVYRFGPSREPA---RIRWMTWGAALTTLAWAVMSIGFSFYLDHFANYNAT 295
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +++ L+++++ V I+GAELNA + R
Sbjct: 296 YGTLGALIGFLIWIWLSVVILIVGAELNAELEHQTAR 332
>gi|186682818|ref|YP_001866014.1| ribonuclease BN [Nostoc punctiforme PCC 73102]
gi|186465270|gb|ACC81071.1| putative ribonuclease BN [Nostoc punctiforme PCC 73102]
Length = 338
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 90/274 (32%), Gaps = 5/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVV 66
++ + + + + E+ +A+ ++ + S+ P ++ +AG G ++ +
Sbjct: 6 IWKLFQETFKEWSEDKASRLAAALAYYTIFSIAPLLIIVIAIAGAVFGEEAARGQIVGQI 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
G A+ I I + IS + ++ L+ SLN + V
Sbjct: 66 QGLVGPDGAEFIQTAIQNANKPQTGAIASIISVVVLLLGATGLFTELQDSLNTIWEVKPK 125
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFV--FVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+T +I + A V + + V A V F L + +
Sbjct: 126 PGRGVTNIIRLRILSFAMVIGIGFLLLVSLVISTALSALVTYFSNLLPGVDFLWQILNFL 185
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + LP K +L G + T + +G L Y+ ++ + Y
Sbjct: 186 LSFAITTFLFGLIFKVLPDVKIGWSDVLIGAMLTSFLFSIGRFLLGQYLGN-GSFGSAYG 244
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S++ L ++ GAE Y
Sbjct: 245 AAGSLVVILAWVNYAAQILFFGAEFTQVYARRYG 278
>gi|325571347|ref|ZP_08146847.1| YihY family protein [Enterococcus casseliflavus ATCC 12755]
gi|325155823|gb|EGC68019.1| YihY family protein [Enterococcus casseliflavus ATCC 12755]
Length = 307
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 2/266 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + + + ++ LLS+FP ++ NL +L TV+ V
Sbjct: 15 RFIETTQNRITDSEMGTTSVVVAYYLLLSLFPLMIALGNLLPYLSIDP--NTVLSYVQEL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I I I +L + GL +ISALAA + +S + AL+I++N+A+ V + ++
Sbjct: 73 IPNQIYDFIGPAIENLLTTSSGGLLSISALAALWSASQSINALQIAMNKAFGVDQRSNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R +SF +LL + +V ++ VF + L +++ F NL+ + T++AL
Sbjct: 133 VVRAVSFVIILLFMIAIVGVTMVFGLGKIILDFLQPIFKFQDNLIDTFQTVKWPVTIVAL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ ++ +P AK K+ S LPG IF I W++ + +F Y F+ Y + S +
Sbjct: 193 LFIMMLIYWLVPNAKVKLRSTLPGAIFATIGWMLLSQVFGLYARYFAAKIIGYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
+++L + ILG +NA + Y
Sbjct: 253 VLMIWLNLAATIIILGGIINAVVEEY 278
>gi|325300626|ref|YP_004260543.1| ribonuclease BN [Bacteroides salanitronis DSM 18170]
gi|324320179|gb|ADY38070.1| ribonuclease BN [Bacteroides salanitronis DSM 18170]
Length = 434
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 99/270 (36%), Gaps = 6/270 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ IIY +IE F+ + AS ++ S LLS+ P + +A G +
Sbjct: 26 RKRLYSCVKIIYLSIEQFLNDRIPVRASALTYSTLLSIIPILALLFAIARGFGFDALMEQ 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I G + + + + + + + ++ + S N ++
Sbjct: 86 QIKS--GVMSQQSELVFSWVNSYLQHAQSGIFIGVGLIMLLFTILMLIDNIERSFNAIWQ 143
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R+ + F +LL + +VI S + + + + + F L ++
Sbjct: 144 VKRPRTVFRQITDYFSMLLLLPLLIVISSGLTIVMTTYVKDLETFLLLGPMLKFLVR--- 200
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ I +++F+P K K+ I ++ + + + S Y+ +
Sbjct: 201 -LVPYALTWGMFIALYVFMPNTKVKLSHAWFPGILAGSAFQAFQYFYVNSQIWISNYNAI 259
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y A+I L++ + + GAE++
Sbjct: 260 YGSFAAIPMFLLWTQVSWTICLFGAEMSYV 289
>gi|148544597|ref|YP_001271967.1| ribonuclease BN [Lactobacillus reuteri DSM 20016]
gi|184153955|ref|YP_001842296.1| hypothetical protein LAR_1300 [Lactobacillus reuteri JCM 1112]
gi|227363716|ref|ZP_03847825.1| possible ribonuclease BN [Lactobacillus reuteri MM2-3]
gi|325682926|ref|ZP_08162442.1| YihY family protein [Lactobacillus reuteri MM4-1A]
gi|148531631|gb|ABQ83630.1| putative ribonuclease BN [Lactobacillus reuteri DSM 20016]
gi|183225299|dbj|BAG25816.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227071210|gb|EEI09524.1| possible ribonuclease BN [Lactobacillus reuteri MM2-3]
gi|324977276|gb|EGC14227.1| YihY family protein [Lactobacillus reuteri MM4-1A]
Length = 296
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 67/269 (24%), Positives = 126/269 (46%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I I+H + A+ ++ LLS+FP ++ NL +G T++ + A
Sbjct: 11 FIALLIQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGIDA--KTILAYLSTAI 68
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + I I L + G+ T AL A + +S G+ A + S+N AY + E ++ +
Sbjct: 69 PESVYDFIQPLIYDFLRRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPVM 128
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++SF ++++ V + I+ ++ L ++ F + + I + R T LF
Sbjct: 129 NRIVSFVWMIVLLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYIAIFSSLRWPVTFGVLF 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I L ++ F+P AK ++ L G + W+ + LF+ Y + F Y + + +
Sbjct: 189 IALTLLYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTLLFGHGVISYKTIGAFIA 248
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+V+L G +LGA LNA++ + +
Sbjct: 249 MMVWLDFSGYIIMLGAALNAALQECHEGE 277
>gi|284031261|ref|YP_003381192.1| ribonuclease BN [Kribbella flavida DSM 17836]
gi|283810554|gb|ADB32393.1| ribonuclease BN [Kribbella flavida DSM 17836]
Length = 420
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 56/284 (19%), Positives = 111/284 (39%), Gaps = 15/284 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR + +I + + +A+ + A+LS+ P I A GF+ + F
Sbjct: 1 MRRIPATTWKLITQTVGTCLRYRVTGLAAEGAFFAILSLPPLIFGLAGSIGFIASRYFEV 60
Query: 61 TVIDVVFGAWPEVIAK---------PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
I+ + ++ A+ I + QVL + +I + A + S +
Sbjct: 61 ETIEDIKVQIADLAARALTDDSVKTVIVPTLNQVLNGGRPDVISIGFVLALWSGSRALNV 120
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
++ Y + R TR +SF A V VI+ + +A P A+ + L
Sbjct: 121 FVDTITIMYGMGGKRGIVRTRALSFSLYCAALVIGVIVLPLVLAGPDAVNAL------LP 174
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
L + + L ++ ++ +S LPG W++G+ +
Sbjct: 175 ARLDFLNQLYWPVVTILSAGFLNTLYHLSVPVRTPWVSDLPGSFLALSIWILGSFVLRWI 234
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + +++Y LA+ + L++LYM + ++GA LNA +
Sbjct: 235 LQSTVGGTSIYGPLAAPIAVLMWLYMSAIAVLIGAALNAVVDRL 278
>gi|212694774|ref|ZP_03302902.1| hypothetical protein BACDOR_04307 [Bacteroides dorei DSM 17855]
gi|212662628|gb|EEB23202.1| hypothetical protein BACDOR_04307 [Bacteroides dorei DSM 17855]
Length = 442
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 90/276 (32%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I +I F + AS ++ S LLS+ P + +A G + T
Sbjct: 32 RGILYNAIKIATLSIREFTQGRILNKASALTYSTLLSIIPILAILFAIARGFGFSNLLET 91
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + + + + + + + N ++
Sbjct: 92 QFRSGLEGQSAAAETILGLIDSYLVHAKSGVFIGVGLVMLFWTILSLTYNIERTFNYIWQ 151
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R+ Y F +LL + +V+ S + + + + L ++
Sbjct: 152 VKKPRTLYRKMTDYFSILLLLPLLIVLSSGLTIFMSTMVK----NMEDFVLLAPLMKFLV 207
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + +F+P K K+ + I ++ L+ + S Y+ +
Sbjct: 208 RLVPFILTWAMFTGLFVFMPNTKVKLKYAIIPGIIAGTAFQAFQYLYIGSQIWVSRYNAI 267
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A+I L++ + + GAEL
Sbjct: 268 YGSFAAIPMFLLWAQISWGICLYGAELCYVAQNLRN 303
>gi|237710955|ref|ZP_04541436.1| ribonuclease BN [Bacteroides sp. 9_1_42FAA]
gi|237727253|ref|ZP_04557734.1| ribonuclease BN [Bacteroides sp. D4]
gi|229434109|gb|EEO44186.1| ribonuclease BN [Bacteroides dorei 5_1_36/D4]
gi|229454799|gb|EEO60520.1| ribonuclease BN [Bacteroides sp. 9_1_42FAA]
Length = 439
Score = 136 bits (342), Expect = 4e-30, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 90/276 (32%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I +I F + AS ++ S LLS+ P + +A G + T
Sbjct: 29 RGILYNAIKIATLSIREFTQGRILNKASALTYSTLLSIIPILAILFAIARGFGFSNLLET 88
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + + + + + + + N ++
Sbjct: 89 QFRSGLEGQSAAAETILGLIDSYLVHAKSGVFIGVGLVMLFWTILSLTYNIERTFNYIWQ 148
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R+ Y F +LL + +V+ S + + + + L ++
Sbjct: 149 VKKPRTLYRKMTDYFSILLLLPLLIVLSSGLTIFMSTMVK----NMEDFVLLAPLMKFLV 204
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + +F+P K K+ + I ++ L+ + S Y+ +
Sbjct: 205 RLVPFILTWAMFTGLFVFMPNTKVKLKYAIIPGIIAGTAFQAFQYLYIGSQIWVSRYNAI 264
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A+I L++ + + GAEL
Sbjct: 265 YGSFAAIPMFLLWAQISWGICLYGAELCYVAQNLRN 300
>gi|323345450|ref|ZP_08085673.1| YihY family protein [Prevotella oralis ATCC 33269]
gi|323093564|gb|EFZ36142.1| YihY family protein [Prevotella oralis ATCC 33269]
Length = 453
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 41/270 (15%), Positives = 101/270 (37%), Gaps = 4/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R V +Y I+ F + MAS ++ S LL++ P +A G +
Sbjct: 40 RRLLYSVIKRLYLTIQFFTTKRTVDMASALTYSTLLAIVPICAVVFAIARGFGFSSHIEV 99
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ P+ I ++ + + I + + + + + N ++
Sbjct: 100 WFRDALSSQPQAAEAIIGFVNSYLVHAKSGVILGIGLIFMLWTVLMLIRNIEQTFNDIWQ 159
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS T + L V +V+ S + + + + + ++ G
Sbjct: 160 VKKKRSIMRTITDYLAMLFLIPVFIVLTSGISLFMAMVAVKTDSILL----VGPVVRFGI 215
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L ++LF+P K+ ++ I + ++ + ++ H + S+Y+ +
Sbjct: 216 NIMPYLLTVCVFTSLYLFMPNTHVKLKYVIIPGIISGVAMQLVQYVYIHSQIFLSSYNAI 275
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y A++ ++++ + + GAE++ +
Sbjct: 276 YGSFAALPLFMLWVQISWSICLFGAEMSYA 305
>gi|282877902|ref|ZP_06286711.1| YihY family protein [Prevotella buccalis ATCC 35310]
gi|281299903|gb|EFA92263.1| YihY family protein [Prevotella buccalis ATCC 35310]
Length = 453
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 106/271 (39%), Gaps = 4/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + A++ F+ + +A+ ++ S LL++ P +A G +++
Sbjct: 27 LQYLLISIVKKLSLAVKFFLTKGTGDLAAALTYSTLLAIVPICAVVFAVARGFGFSKYIE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ I ++ + + + L + + + N +
Sbjct: 87 QWFRNALSGQSQAAEIIIGFVNSYLVHTQSGVILGVGLLFMLWTVLRLTRTIEQTFNNIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V R+ + T V L + +V++S + + + + + + L ++ G
Sbjct: 147 QVKHERTLFRTVTDYLAMVFLMPILIVLISGISIFMTAFVDRAQGYML----LAPMLQIG 202
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + I +++F+P K KI + + I ++ V + + H + S+Y+
Sbjct: 203 LKVMPFIIMSCVFIGLYIFMPNTKVKITAAIVPGILAGVAMQVLQLFYIHGQMLLSSYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A++ ++++ + + GA+L +
Sbjct: 263 IYGSFAALPLFMLWVQISWTICLFGAQLCYT 293
>gi|291483230|dbj|BAI84305.1| hypothetical protein BSNT_01322 [Bacillus subtilis subsp. natto
BEST195]
Length = 275
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + +G + ++ ++ LLS+FPF++F L +L V+ V+
Sbjct: 2 SFLKELFSRYTLHEGQSKSAELAYFFLLSLFPFLIFMLTLTAYLPLS--TDDVLGVIEQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + Q L GL + +AA + +SNG+ A+ SLN AY V E RS+
Sbjct: 60 APASAMSLVESITHQTLNNRNGGLLSFGIIAALWSASNGMNAIVRSLNHAYDVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + T+++ + V F A L + R + L L
Sbjct: 120 IVRLTSIFLTIAMVFTILVALLLPVFGREIGRLASDFVGASDLFLSVWAAIRWGVSPLVL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++ P K + ++PG +F I W+V + LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFSALYVIAPNKKLSLRFVMPGAVFATIGWIVVSTLFSFYVSTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G+ ILG E+NA +
Sbjct: 240 VLMIWFYLSGILIILGGEINALLHKRKK 267
>gi|299768710|ref|YP_003730736.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter sp. DR1]
gi|298698798|gb|ADI89363.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter sp. DR1]
Length = 415
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 101/280 (36%), Gaps = 4/280 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFVLYVFKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + D+ L + L I L + + ++ NR +
Sbjct: 69 QQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E RS + + + + L + L + + F + I+
Sbjct: 129 RVKETRSGIMGFMRYWTIISLGPIILGSAFVISSTVASMNILSNNFAGYQLDGSFIL--- 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L +G ++ +P + + + + + + LF+ + F++Y
Sbjct: 186 -WLISFLLTIVGFFILYWTIPNRTVPVYAAGIAACLSAVLFEILKNLFSFVMSNFTSYEL 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 245 IYGAFAAVPIFLLWIFLSWNIILLGVEVSFALTAFHSGKE 284
>gi|50086169|ref|YP_047679.1| putative ribonuclease (Rbn) [Acinetobacter sp. ADP1]
gi|81392297|sp|Q6F7V8|Y3168_ACIAD RecName: Full=UPF0761 membrane protein ACIAD3168
gi|49532145|emb|CAG69857.1| putative ribonuclease (Rbn) [Acinetobacter sp. ADP1]
Length = 419
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 99/279 (35%), Gaps = 4/279 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I + F + A ++ + L +V P + + + A +
Sbjct: 13 LPFYEKTWFQFILFVLRRFEADRCREHAGALTYTTLFAVVPMLTVFLVIISSIKALEPAR 72
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + D +L + L I L + + + + NR +
Sbjct: 73 QQLQQLIYSNFLPKSTIAFDRVLNSFTEKSSNLTVIGILFLFVTTVMMLSTIETAFNRIW 132
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E RS I + + + L + L + + F + I+
Sbjct: 133 RVKETRSGIIGFMRYWTIISLGPIILGSAFVISSTVASMNILSNNFAGYELSGAFIL--- 189
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +G ++ +P + + + F+ + + +F + F++Y
Sbjct: 190 -WLISFGLTILGFFILYWTIPNRTVPMYAAIIAACFSAAIFELLKNIFGFAMSNFTSYEL 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A+I L+++++ +LG E++ ++ ++ K
Sbjct: 249 VYGAFAAIPIFLLWIFLSWNIVLLGVEVSYALTAFHSDK 287
>gi|13488510|ref|NP_109517.1| hypothetical protein mll9669 [Mesorhizobium loti MAFF303099]
gi|14028264|dbj|BAB54856.1| mll9669 [Mesorhizobium loti MAFF303099]
Length = 356
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 118/270 (43%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + E F ++ +A+ + LL++FP + ++ GF+ V + + G
Sbjct: 62 DIFWRLWEEFSKDRVLLVAAGATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGGL 121
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I ++ + + L I A + S++G++AL ++N AY E R
Sbjct: 122 LPSGGLDLIRGQLQALASQKPGALGIGFFIGLGIALWSSNSGMKALFDAMNIAYEEREKR 181
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S L+S + + A + +++ +P L Y ++ R +
Sbjct: 182 SIIALNLMSILFTVGALLIGILLLLTVGVVPALLRYFY----LDAWTETLVAVSRWPILV 237
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ G+ ++ F P+ ++K + G + ++W+ + LF+ Y+ F+ Y+ Y L
Sbjct: 238 GAMLTGISLLYRFGPSRERAKWRWLSWGSLIATVAWIAASWLFSFYLQHFANYNATYGSL 297
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+++ +++ ++ + I GA +NA M
Sbjct: 298 GAVVGLMMWTWISVIILIAGAAINAEMEHQ 327
>gi|312882854|ref|ZP_07742586.1| ribonuclease BN [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369373|gb|EFP96893.1| ribonuclease BN [Vibrio caribbenthicus ATCC BAA-2122]
Length = 304
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 96/264 (36%), Gaps = 8/264 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAWP 71
++ + A +++ LLS+ P + ++ Q + D V +
Sbjct: 15 RYVVKRIGYDRINVNAGYLAYITLLSIVPMLTVLLSVLSSFSVFQNTGDAIQDFVITHFV 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + ++ + + + + + +LN +RV E R +
Sbjct: 75 PAAGDAVKSALYEFVSN-TGKMSAVGGGFLFAVALMLISNIDKNLNYIWRVTEKRRAVFS 133
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + + L L + + F
Sbjct: 134 FSMYWMILTLGPILVGMSIVMSSYLTSLKLINNEALSLLYEL------ILRWLPFILSFA 187
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P + K+ + G + + + + F YI F +Y +Y LA+I
Sbjct: 188 AFVGLYLLVPNKRVKLSHAVIGGVIAALLFEMSKKAFALYITQFPSYQLIYGALAAIPIL 247
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
+++Y+ + ++GAE+ A++
Sbjct: 248 FIWVYLCWLIVLVGAEITAALGER 271
>gi|317494540|ref|ZP_07952953.1| YihY family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917470|gb|EFV38816.1| YihY family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 298
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWP 71
+ MA ++ +LLS+ P + +L + + +F +
Sbjct: 17 RLLWARVNHDRVSMMAGSLAYISLLSLVPLVTVIFSLFAAFPMFGEVSEQLKHFIFTNFV 76
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + Q +A +K + + A+ + + ++ +LN +R R +
Sbjct: 77 PAAGDVVQSYLEQFVANSSK-MTAVGAVGLIVTALLVISSVDGALNHIWRSRTQRPIVYS 135
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
I + + L + + + + + A+ + ++ +L
Sbjct: 136 FAIYWMVLTLGPILVGASMAISTYLLSI------RWLAMAGVYSLVDQVLRIFPLLLSCA 189
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ +P + L G I + + +G F Y+ F +Y +Y LA I
Sbjct: 190 SFWLIYCVVPTQRVPARDALCGAIVAGLLFELGKKAFGLYVTMFPSYQLIYGVLAVIPIL 249
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
V++Y +LGAE+ S+ Y +
Sbjct: 250 FVWVYWSWCIVLLGAEITVSLSEYRAMHQ 278
>gi|300703861|ref|YP_003745463.1| tRNA-processing ribonuclease bn [Ralstonia solanacearum CFBP2957]
gi|299071524|emb|CBJ42848.1| tRNA-processing ribonuclease BN [Ralstonia solanacearum CFBP2957]
Length = 436
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 96/272 (35%), Gaps = 7/272 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ ++ A+ E+ +A ++ + +LS+ P + L Q F +
Sbjct: 15 KLRALLRYALRRAGEDSLPQVAGSLTFTTVLSLVPVLTVAFALFTAFPMFQSFRAAIESY 74
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+F L + AKGL + S + + +LN +RV +
Sbjct: 75 LFSNLVPGNISRPILTYLNQFSHNAKGLTAAGLVGLVVTSVMTMLTVENALNAIWRVHQR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R L+ + V V + V + A P +
Sbjct: 135 RPLTQRVLVFWALVSFGPVLIGASLSVSSYLVSISAGYVAKLPYG------LGVVVGVVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGTF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ I
Sbjct: 249 AALPIFLLWIYVSWLVTLLGATIAATLPIVRQ 280
>gi|223937010|ref|ZP_03628918.1| ribonuclease BN [bacterium Ellin514]
gi|223894291|gb|EEF60744.1| ribonuclease BN [bacterium Ellin514]
Length = 345
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 50/286 (17%), Positives = 106/286 (37%), Gaps = 11/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFV 59
M V+ ++ ++ +F+ ++ + + +S +L++ P V +AG + H
Sbjct: 1 MASTLKAVWGLLKQSVNNFINDNAQRLGAALSYYTVLALPPLFVILFFVAGLVLRHHDVQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNR 118
V + V G + + I + + + A+ A S+ L+ +LN
Sbjct: 61 KDVFNQVGGLIGKQGGEAIKSIMANPQQQQKGFVASAIAIGALLVTSTGLFLELQNALNS 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V E + RL+SFG +++ L++ V A+ Y P L
Sbjct: 121 IWGVREKPGQGVTGFIKNRLLSFGMIVIIGFLLLVSMVVSTALTALNKYFAGLVPDLH-- 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ + + + + + LP K + G T + +G Y+
Sbjct: 179 -ILWQILNVVVSFGVITVLFAMLFKVLPDVKIAWKDVWIGAAITAFLFTLGKFGLGLYLG 237
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T S Y S++ L+++Y GAE+ + + K
Sbjct: 238 KSATASA-YGAAGSLVIILLWVYYSAQILFFGAEVTQAYACRFGEK 282
>gi|77359142|ref|YP_338717.1| ribonuclease BN [Pseudoalteromonas haloplanktis TAC125]
gi|123588858|sp|Q3IJ43|Y171_PSEHT RecName: Full=UPF0761 membrane protein PSHAa0171
gi|76874053|emb|CAI85274.1| tRNA processing exoribonuclease BN; required for maturation of tRNA
encoded by bacteriophages; dimer [Pseudoalteromonas
haloplanktis TAC125]
Length = 300
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 46/259 (17%), Positives = 99/259 (38%), Gaps = 8/259 (3%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVI 74
I +++ A +++ LLS+ P I G + + + +F +
Sbjct: 27 INRCIDDQITVNAGYLAYVTLLSLVPLIAVGVAIFSAFPGFESTRLAIESFLFTNFVPTS 86
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I + I + + + A + + + +LNR +R+ + R I+ +
Sbjct: 87 SDVIKEHISSFAGNANQ-MTAVGIGFLAAIALLLIRNVDATLNRIWRIKKKRPMMISFAV 145
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L V L V I +++ + P +G I
Sbjct: 146 YWMVLSLGPVFLGGSIAVTSYIVSLVSFADQGIPGFSGF------LLKLLPYGISMVGFI 199
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P + + +PG +F + + + F YI F +Y +Y +A+I V+
Sbjct: 200 MLYTLVPNTRVSFKAAIPGALFAAMLFELTKKGFALYISHFPSYEVIYGAVATIPILFVW 259
Query: 255 LYMLGVFFILGAELNASMI 273
+Y+ + +LGAEL A +
Sbjct: 260 IYLSWIVVLLGAELTACIS 278
>gi|260428190|ref|ZP_05782169.1| transporter [Citreicella sp. SE45]
gi|260422682|gb|EEX15933.1| transporter [Citreicella sp. SE45]
Length = 313
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 79/275 (28%), Positives = 147/275 (53%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ V+ + + +D + +A +++ ++++FPF++F ++L F+G +I
Sbjct: 33 WRAVWAVCREGGLRLWSDDAFGLAGNVAFRVIMAIFPFLIFTSSLTAFIGTDGMAEDLIS 92
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ PE + +PI E+ QV+ V G+ ++ L +F+ GV+ +R+ LNRAY + E
Sbjct: 93 FLIAIVPEALIEPIVSEVRQVMTVQRGGVLSLGVLLTIWFALGGVDGIRVGLNRAYGIRE 152
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R WY+ + V++AS+ LV++ ++ V P A +++ FP + + R +
Sbjct: 153 TRPWYVLYPLMALMVVIASLVLVLVGYLLVLAPRAGSWLHILFPDFDPASVTVSLVRYPS 212
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L L H+ LPA +++ SI PGV+FT +SW+ F+ Y+ F+ Y++ Y G
Sbjct: 213 AALILIASLFLAHVLLPARRTRFSSIYPGVLFTVVSWIALTAAFSFYLGHFAAYASYYGG 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA I+ L F+Y+ + I G ELN ++ I +
Sbjct: 273 LAGIIAALYFMYLAALVLIFGGELNRAIRIRRLSR 307
>gi|90020548|ref|YP_526375.1| tRNA-processing RNAse BN [Saccharophagus degradans 2-40]
gi|123396513|sp|Q21MB6|Y901_SACD2 RecName: Full=UPF0761 membrane protein Sde_0901
gi|89950148|gb|ABD80163.1| tRNA-processing RNAse BN [Saccharophagus degradans 2-40]
Length = 433
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 97/276 (35%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FV 59
++ + + + + FVE+ A+ ++ +L ++ P + ++ A
Sbjct: 11 IKPFVFALGRFFGNLYKEFVEKGCQKSAAALTYMSLFAMVPLMAVFYSMFSMFPAFDGVA 70
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ D++F + + + + A+ L A + + + + N
Sbjct: 71 QQLQDMIFSHFVPETGSEVQQYLANF-SQQARNLSAAGAGLLVVTAYLMLTNIEKTFNAI 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V R + L+ + + + + L + + V ++ + + +
Sbjct: 130 WGVKAARRGITSFLLYWAVLTIGPLLLGAGLAMSTYLLSLKIIVNEY-----DAIGVTNL 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
Y + + +P + I L G I T + + + + F + S++S
Sbjct: 185 FFSYLPLFTTSAAFTLLFAAVPNCRVPIKFALIGGILTAVCFELLKIGFGWVVAN-SSFS 243
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y A + L+++ +L + + GA ++
Sbjct: 244 QIYGAFAVVPLFLLWVNLLWMIILGGAVFVRTLAER 279
>gi|317153119|ref|YP_004121167.1| ribonuclease BN [Desulfovibrio aespoeensis Aspo-2]
gi|316943370|gb|ADU62421.1| ribonuclease BN [Desulfovibrio aespoeensis Aspo-2]
Length = 474
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 106/273 (38%), Gaps = 4/273 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ V + Y + F ++ A+ ++ + +LS+ PF+ +++ G
Sbjct: 34 RLWRSVSRLFYLVVFGFAKDQCIIRAAALTFTTILSIVPFLAVAFSISKGFGLQNT--EF 91
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I + + I + + L + + + V + + N + V
Sbjct: 92 IRTLVLKLTTGREEVADKIIEYIDRTNVQALGWVGVATLLFTVLSLVGTIEKAFNTIWGV 151
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ RS + F +++ + L+I S + L + ++ + L+
Sbjct: 152 TKGRSAWRKVTDFFPVIVICPMVLLIAS--SFNLSLQQQEIVTGLLSVKAIGLLEAAFLK 209
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + F++ F+P K ++ S + G + + W + L+ H+ + + Y+ +Y
Sbjct: 210 ATPYILISMAFAFMYAFIPHTKVRLTSAVLGGVVGGVLWQMAQWLYIHWQIGAAKYNAIY 269
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
A + L+++Y+ + +LG E++ +
Sbjct: 270 GSFAQLPLLLMWIYISWLVVLLGCEVSYAWQNL 302
>gi|282879849|ref|ZP_06288576.1| YihY family protein [Prevotella timonensis CRIS 5C-B1]
gi|281306243|gb|EFA98276.1| YihY family protein [Prevotella timonensis CRIS 5C-B1]
Length = 451
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 99/270 (36%), Gaps = 4/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +Y AI F + A+ ++ S LL++ P +A G +++
Sbjct: 28 KYLLVSILKKLYLAITFFFTKGTSDYAAALTYSTLLAIVPICAVVFAIARGFGFSKYIEE 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ I ++ + + + L + + + N ++
Sbjct: 88 WFRQALSGQEQAADIIIRFVNSYLIHTHSGVILGVGLLFMLWTVLRLTRTIEQTFNSIWQ 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R + T V + + +V++S + + + + + L I+
Sbjct: 148 VKQERGLFRTVTDYLAMVFMMPIMIVLISGISIFMTTFVDRASSYML----LAPILQIAL 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + +++F+P K K + L I ++ + + H + S+Y+ +
Sbjct: 204 NLMPFVIISCVFVGLYIFMPNTKVKFSAALAPGILAGVAMQFLQLFYIHGQMLLSSYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y A++ ++++ + + GA+L +
Sbjct: 264 YGTFAALPLFMLWMQISWTICLFGAQLCYT 293
>gi|257867525|ref|ZP_05647178.1| ribonuclease BN [Enterococcus casseliflavus EC30]
gi|257873854|ref|ZP_05653507.1| ribonuclease BN [Enterococcus casseliflavus EC10]
gi|257877604|ref|ZP_05657257.1| ribonuclease BN [Enterococcus casseliflavus EC20]
gi|257801581|gb|EEV30511.1| ribonuclease BN [Enterococcus casseliflavus EC30]
gi|257808018|gb|EEV36840.1| ribonuclease BN [Enterococcus casseliflavus EC10]
gi|257811770|gb|EEV40590.1| ribonuclease BN [Enterococcus casseliflavus EC20]
Length = 307
Score = 135 bits (341), Expect = 5e-30, Method: Composition-based stats.
Identities = 71/266 (26%), Positives = 129/266 (48%), Gaps = 2/266 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + + + ++ LLS+FP ++ NL +L TV+ V
Sbjct: 15 RFIETTQNRITDSEMGTTSVVVAYYLLLSLFPLMIALGNLLPYLSIDP--NTVLSYVQEL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I I I +L + GL +ISALAA + +S + AL+I++N+A+ V + ++
Sbjct: 73 IPSQIYDFIGPAIENLLTTSSGGLLSISALAALWSASQSINALQIAMNKAFGVDQRSNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R +SF +LL + +V ++ VF + L +++ F NL+ + T++AL
Sbjct: 133 VVRAVSFVIILLFMIAIVGVTMVFGLGKIILDFLQPIFKFQDNLIDTFQTVKWPVTIVAL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ ++ +P AK K+ S LPG IF I W++ + +F Y F+ Y + S +
Sbjct: 193 LFIMMLIYWLVPNAKVKLRSTLPGAIFATIGWMLLSQVFGLYARYFAAKIIGYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
+++L + ILG +NA + Y
Sbjct: 253 VLMIWLNLAATIIILGGIINAVVEEY 278
>gi|16077857|ref|NP_388671.1| integral inner membrane protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|221308625|ref|ZP_03590472.1| hypothetical protein Bsubs1_04393 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312949|ref|ZP_03594754.1| hypothetical protein BsubsN3_04344 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317874|ref|ZP_03599168.1| hypothetical protein BsubsJ_04293 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322147|ref|ZP_03603441.1| hypothetical protein BsubsS_04389 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|321314517|ref|YP_004206804.1| putative integral inner membrane protein [Bacillus subtilis BSn5]
gi|81342316|sp|O34437|YFKH_BACSU RecName: Full=Putative ribonuclease-like protein yfkH
gi|2626820|dbj|BAA23398.1| YfkH [Bacillus subtilis]
gi|2633114|emb|CAB12619.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. subtilis str. 168]
gi|320020791|gb|ADV95777.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis BSn5]
Length = 275
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 69/268 (25%), Positives = 121/268 (45%), Gaps = 2/268 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + +G + ++ ++ LLS+FPF++F L +L V+ V+
Sbjct: 2 SFLKELFSRYTLHEGQSKSAELAYFFLLSLFPFLIFMLTLTAYLPLS--TDDVLGVIEQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + Q L GL + +AA + +SNG+ A+ SLN AY V E RS+
Sbjct: 60 APASAMSLVESITHQTLNNRNGGLLSFGIIAALWSASNGMNAIVRSLNHAYDVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + T+++ + V F A L + R + L L
Sbjct: 120 IVRLTSIFLTIAMVFTILVALLLPVFGREIGRLASDFVGASDLFLSVWAAIRWGVSPLVL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++ P K + ++PG +F I W++ + LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFSALYVIAPNKKLSLRFVMPGAVFATIGWIIVSTLFSFYVSTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G+ ILG E+NA +
Sbjct: 240 VLMIWFYLSGILIILGGEINALLHKRKK 267
>gi|153008339|ref|YP_001369554.1| putative ribonuclease BN [Ochrobactrum anthropi ATCC 49188]
gi|151560227|gb|ABS13725.1| putative ribonuclease BN [Ochrobactrum anthropi ATCC 49188]
Length = 288
Score = 135 bits (341), Expect = 6e-30, Method: Composition-based stats.
Identities = 131/280 (46%), Positives = 185/280 (66%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ + I YD I HF +DGWA ASHI+LS L+++FPF++F LA FLG +F
Sbjct: 1 MRKIRRFLRQITYDVIGHFSSDDGWAFASHIALSGLMALFPFLIFATTLASFLGTKEFAD 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E++ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVMNVLTVQRSGLLTLSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRLAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A+ F Y+ TF+TY T
Sbjct: 181 RYTVAVGVLVLALFMVHIWLPAGRRSLGDILPGILITLIAWLAAAMAFAKYLETFATYVT 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIIGAEINAAIMIFRKREQ 280
>gi|299137399|ref|ZP_07030581.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
gi|298600804|gb|EFI56960.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
Length = 343
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 109/276 (39%), Gaps = 6/276 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFG 68
+ + + ++ + A+ + L ++FP +V +++ G +++ +
Sbjct: 41 VWKRTFQAMMSDNLLSRAAEMGYYFLFALFPTLVCASSILGLAARQASRIYDSLLHYLAL 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + Q A G T+ +AA + +S G A++ +N Y+V E R +
Sbjct: 101 VVPGSAYNMVIETFNQTAAAATGGKITLGLVAALWSASVGFAAIQDGMNTVYKVRESRPY 160
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV---RKFFPALGNLLLIIWNGRIYAT 185
+ R + +L SV + V + L V +++ +
Sbjct: 161 WKARGAAILVTMLLSVMVTANLGVLLGGDLIAKLVYVRIWHHALATTTAIVVHLVQWVVA 220
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + ++ F P K + I PG WV+ ++ Y+ F +S Y
Sbjct: 221 SGLLLLQFSTIYYFAPDLKAKRWHWITPGAAIGISGWVLASLGLRVYLHFFDNFSLTYGS 280
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L +++ L + Y+ G+ +LGAE+N+ + K+
Sbjct: 281 LGAVIILLTWFYITGLMLLLGAEINSEIQAAVIEKQ 316
>gi|114777916|ref|ZP_01452830.1| hypothetical protein SPV1_05824 [Mariprofundus ferrooxydans PV-1]
gi|114551703|gb|EAU54255.1| hypothetical protein SPV1_05824 [Mariprofundus ferrooxydans PV-1]
Length = 433
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 94/266 (35%), Gaps = 5/266 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + Y E F+ + AS ++ ++LL++ P + G ++ A +
Sbjct: 14 RHATHLLRFSYRVAERFIVDKCIQRASALAYASLLAIVPMVALGFSIFTSFQAFDAISGH 73
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + ++ + L + + L + ++ + + + N +R+
Sbjct: 74 VRDALLGYLIPTSQQAVENYLGTVTDKTTAISIFGVLGLLFTATALLNTVEEAFNTIWRI 133
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R+W + + + L + + + + + +
Sbjct: 134 TRARAWLSKFITFWATLTLTPILIGASLSITSYFAAM-----PLLQHVAEGAGYLSHIPF 188
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L +++ LP + G + + + FT YI + Y +Y
Sbjct: 189 LLPWILSSLALTTLYVVLPNTTVPFRYAVVGGLVGGALFEWTKIGFTFYITEIADYEKLY 248
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
L+++ L++LY+ V +LG+E+
Sbjct: 249 GALSTLPVFLIWLYLTWVVVLLGSEI 274
>gi|260774771|ref|ZP_05883674.1| ribonuclease BN [Vibrio coralliilyticus ATCC BAA-450]
gi|260609333|gb|EEX35485.1| ribonuclease BN [Vibrio coralliilyticus ATCC BAA-450]
Length = 304
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 38/270 (14%), Positives = 91/270 (33%), Gaps = 8/270 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVF 67
+ + + A +++ LLS+ P + ++ VI V
Sbjct: 11 LNFGRYLLTRMGHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFSVFANAGDVIQDFVI 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + +L+ +A + + L + + + +LN +RV R
Sbjct: 71 THFVPAAGDAVKQALLEFVAN-TGKMTAVGGLFLFVAALMLISNIDKNLNYIWRVEHKRR 129
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + + + L + + + + + + L
Sbjct: 130 AVFSFSMYWMVLTLGPILVGASIAATSYVTSLKIIDSEAISGAYDF------LLRWLPFL 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F + +++ +P K + + G I + + F YI F +Y +Y LA+
Sbjct: 184 LSFFAFMGLYILVPNKKVYVSHAVVGAIVAALLFEASKKGFAAYITQFPSYQLIYGALAA 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
I V++Y+ + ++GAE+ A++
Sbjct: 244 IPILFVWVYLCWLIVLIGAEVTAALGEREQ 273
>gi|330977867|gb|EGH77770.1| ribonuclease BN [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 283
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 1/234 (0%)
Query: 47 ANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS 106
L GFL F + P + + I Q+ GL +I + A + +S
Sbjct: 12 IALIGFLHLPDFFSWLRLQSEFLLPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTAS 70
Query: 107 NGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF 166
GV + ++N AY VVE R + +S Y + + L+ + V P + ++
Sbjct: 71 AGVRLMMSAMNAAYDVVEGRPIWKRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQ 130
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
++ + R A ++ L + + ++ +P K + I PG + + W+ ++
Sbjct: 131 IGMEDFIVTLWTILRWPAIIILLMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIFASL 190
Query: 227 LFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
F Y+ TF+ Y+ MY + +I+ L++ Y+ +LGAE+NA + K
Sbjct: 191 AFGFYVKTFADYNAMYGSIGAIIVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 244
>gi|34540710|ref|NP_905189.1| ribonuclease BN [Porphyromonas gingivalis W83]
gi|34397024|gb|AAQ66088.1| ribonuclease BN, putative [Porphyromonas gingivalis W83]
Length = 411
Score = 135 bits (340), Expect = 6e-30, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 101/269 (37%), Gaps = 3/269 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ I +F++ D AS ++ +LS+ P + +A G Q V +
Sbjct: 5 FKSVFLTIRYFIQNDLATQASALTYRTILSIVPMLAVLIGIAKGFGIQQVVHDWLKEYLP 64
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + + V + + Y + + + + ++ + R+W
Sbjct: 65 GHQQELEQALGYVENYLAQVQGGIFVGVGLIVLLYTVFSLIATVEDTFTDIWQTNKRRTW 124
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ G L + + S + + + + G +L +I N Y ++
Sbjct: 125 KRRVIDYMGAFFLLPILITASSGLTLMMTTIKGTYFSEYILFGPMLELILNLIPYVIIVL 184
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
LF G +++ LP + + I + + L+ I+ S Y+ +Y A++
Sbjct: 185 LFTG---MYIVLPTVNVRFWPAFISGVLAGIVFQIFQALYISGILWISKYNAIYGSFAAV 241
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
L+++ + + GA+L+ S+
Sbjct: 242 PLLLLWIQLSWTIVLFGAQLSFSIQNVRK 270
>gi|167752880|ref|ZP_02425007.1| hypothetical protein ALIPUT_01142 [Alistipes putredinis DSM 17216]
gi|167659949|gb|EDS04079.1| hypothetical protein ALIPUT_01142 [Alistipes putredinis DSM 17216]
Length = 456
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 29/271 (10%), Positives = 90/271 (33%), Gaps = 9/271 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + +++ + D ++ ++ L+S+ P + + G +
Sbjct: 28 RWAVRQYKLLFYTARGLIAHDTIVRSAALTFYTLISIVPILALVFAVVKGFGLLDGLIDD 87
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +F EV+ + + + +S + + ++ + N + V
Sbjct: 88 LYALFPQNVEVLDYMVEFARKALANTQGGLIALVSVVTLFWAVIRVFGSVESAFNNIWEV 147
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R+ L ++A + ++ S + + F L
Sbjct: 148 QSSRNIARQYLNYIVIAMVAPILWLVASTMGGYLLRFFDAGNTFLGIL---------LSK 198
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ ++ ++ +P K S I +++ + + ++Y+ +Y
Sbjct: 199 LSALVIIWGSFTLIYAVVPNTKVLWRSAFMAGIVAGTVFMLFQWGYLYLQGWMTSYNAIY 258
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
A++ L++L + + G EL+ +
Sbjct: 259 GSFAALPLFLLWLQISWEILLFGGELSFAYQ 289
>gi|227538328|ref|ZP_03968377.1| TRNA-processing ribonuclease BN [Sphingobacterium spiritivorum ATCC
33300]
gi|227241843|gb|EEI91858.1| TRNA-processing ribonuclease BN [Sphingobacterium spiritivorum ATCC
33300]
Length = 322
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 116/268 (43%), Gaps = 2/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + E AS ++ + LL++FP I+F + ++ F +++ +
Sbjct: 34 LYTVGIFFFQEIARESILNKASSLAYNFLLAMFPAIIFLFTMIPYIPIDNFQEQLLEFLK 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + ++ GL + + AA+FS+NG+ L ++ N+A E RS
Sbjct: 94 VIIPHNAFGVIQTTLEDIIKNQNGGLLSFGFVLAAFFSTNGMHTLMLAFNKASLTTENRS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYAT 185
W RL++ V L + +F + + Y++ + II R
Sbjct: 154 WVRQRLVALALSFTIIVALTVGMSIFTFAGIVINYLKSNISVDVSWFWTFIIKAARWIIL 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
F + ++ F PA+ K PG I ++ F +YI F Y+ +Y +
Sbjct: 214 FGIYFFTVSCLYKFGPASNQKWKLFSPGATLATILAILTFSGFAYYINHFGAYNKLYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
+I+ ++++Y+ + ++G ELNAS+
Sbjct: 274 GTIIVIMIWMYLNSLILLVGYELNASIA 301
>gi|254507312|ref|ZP_05119448.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus 16]
gi|219549772|gb|EED26761.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus 16]
Length = 306
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 91/269 (33%), Gaps = 8/269 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAWPE 72
I + A +++ LLS+ P + ++ + + D V +
Sbjct: 16 YLIARMAHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFSIFENAGDAIQDFVITHFVP 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ +L+ ++ + + + + + +LN +RV R +
Sbjct: 76 AAGDAVKGALLEFVSN-TGKMSAVGGGFLFVAALMLISNIDKNLNYIWRVRRKRRAVFSF 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + L + + + + + + L
Sbjct: 135 SMYWMVLTLGPILVGASIAATSYVTSL------KIIESEAVSGVYNLLLRWLPFLLSLFA 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++L +P K I L G + I + F YI F +Y +Y LA+I
Sbjct: 189 FVGLYLLVPNKKVHISHALIGAVVAAILFEASKKGFAAYITQFPSYQLIYGALAAIPILF 248
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKKP 281
V++Y+ + ++GAE+ A++ KP
Sbjct: 249 VWVYLCWLIVLVGAEVTAALGEKEHWSKP 277
>gi|296331881|ref|ZP_06874346.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305673493|ref|YP_003865165.1| hypothetical protein BSUW23_04000 [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296150959|gb|EFG91843.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305411737|gb|ADM36856.1| putative integral inner membrane protein with ribonuclease fold
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 275
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 72/268 (26%), Positives = 122/268 (45%), Gaps = 2/268 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + + +G + ++ ++ LLS+FPF++F L +L V+ VV
Sbjct: 2 NFLKELFSRYTLHEGQSKSAELAYFFLLSLFPFLIFMLTLTAYLPIS--TNDVLGVVKQY 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + Q L GL + +AA + +SNG+ A+ SLN AY V E RS+
Sbjct: 60 APASAMSLVESITQQTLNNRNGGLLSFGIIAALWSASNGMNAIVRSLNHAYEVEENRSFI 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I RL S + T+++ + V F A L I R + L L
Sbjct: 120 IVRLTSIFLTIAMVFTILVALLLPVFGREIGRLASDFVGASDLFLSIWAAIRWGVSPLVL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++ P K + ++PG +F I W+V + LF+ Y+ TF+ YS Y + I+
Sbjct: 180 LIVFSALYVIAPNKKLSLRFVMPGAVFATIGWIVVSTLFSFYVSTFANYSATYGSIGGII 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y+ G+ ILG E+NA +
Sbjct: 240 VLMIWFYLSGILIILGGEINALLHKRKK 267
>gi|226953927|ref|ZP_03824391.1| ribonuclease (Rbn) [Acinetobacter sp. ATCC 27244]
gi|294651571|ref|ZP_06728879.1| ribonuclease [Acinetobacter haemolyticus ATCC 19194]
gi|226835329|gb|EEH67712.1| ribonuclease (Rbn) [Acinetobacter sp. ATCC 27244]
gi|292822540|gb|EFF81435.1| ribonuclease [Acinetobacter haemolyticus ATCC 19194]
Length = 416
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 99/275 (36%), Gaps = 4/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
F I + F + A ++ + L +V P + + + A + +
Sbjct: 15 KTWFQFIVFVLRRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPARQQLQQ 74
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + D+ L + L I L + + ++ NR +RV E
Sbjct: 75 LIYSNFLPKSTIAFDKALSAFTDKSSNLTIIGILFLFVTTVLMLSSIENVFNRIWRVKET 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + + + + L + L + + F N ++ +
Sbjct: 135 RTGLVGFMRYWTIISLGPILLGSAFVLSSTVASMNILSNNFAGYQLNGAFLL----WLIS 190
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L IG ++ +P I S + F+ + V LF + F++Y +Y
Sbjct: 191 FLLTIIGFFILYWTIPNRNVPIYSAMIAACFSATVFEVLKRLFGWIMSNFTSYEIVYGAF 250
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 251 AAVPIFLLWIFLSWNIILLGVEISYALTAFHSGKE 285
>gi|262280182|ref|ZP_06057966.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262257960|gb|EEY76694.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 415
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 101/280 (36%), Gaps = 4/280 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFVLYVFKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + D+ L + L I L + + ++ NR +
Sbjct: 69 QQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E RS + + + + L + L + + F + I+W
Sbjct: 129 RVKETRSGIMGFMRYWTIISLGPIILGSAFVISSTVASMNILSNNFAGYQLDGSFILWM- 187
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +G ++ +P + + + + + LF+ + F++Y
Sbjct: 188 ---ISFVLTIVGFFILYWTIPNRTVPVYAAGIAACLSAALFEILKNLFSFVMSNFTSYEL 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 245 IYGAFAAVPIFLLWIFLSWNIILLGVEVSFALTAFHSGKE 284
>gi|269964595|ref|ZP_06178834.1| tRNA processing ribonuclease BN [Vibrio alginolyticus 40B]
gi|269830722|gb|EEZ84942.1| tRNA processing ribonuclease BN [Vibrio alginolyticus 40B]
Length = 314
Score = 135 bits (340), Expect = 7e-30, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 91/266 (34%), Gaps = 8/266 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
++ + A +++ LLS+ P + ++ V V+ +
Sbjct: 22 FFKYLLKRLTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFANVGEVLQGYIIEN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + + +A + + + + + +LN +RV + R
Sbjct: 82 FVPASGEAVHTALQEFVAN-TGKMSAVGGGFLFIAAVMLISNIDKNLNYIWRVKDKRRLV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + + L + +L
Sbjct: 141 FSFSMYWMVLTLGPIMVGASIAATSYVTSL------QILENETLSGAFNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + +++ +P K + G I + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFLGLYILVPNKKVHLAHGAMGAAVAAILFELSKKGFALYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + +LGAE+ A++
Sbjct: 255 ILFVWVYLCWMIVLLGAEVTAALGER 280
>gi|149375985|ref|ZP_01893751.1| ribonuclease BN-like family protein [Marinobacter algicola DG893]
gi|149359622|gb|EDM48080.1| ribonuclease BN-like family protein [Marinobacter algicola DG893]
Length = 440
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 97/256 (37%), Gaps = 2/256 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
Y + + A + + LLS+ P + ++ LG HQ + + F
Sbjct: 37 RTAYALARDVISGNLTLHAMSLVYTTLLSIVPLLALSFSVLKALGVHQRMEPFLFQFFRP 96
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + V + L ++ Y + V+ + S N +RV +MRS
Sbjct: 97 MGPQGVEIAEQILGFVDNMKVGVLGSVGLALLVYTVVSLVQKIERSFNMIWRVPDMRSMA 156
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+++ + +V + I + + + L +I + + +
Sbjct: 157 QRFSNYLSVIMVGPLLMVSAIGISATI--FSSAFVQALMEIEPLGSMIVFATRFTPFMLV 214
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FV++F+P + K+ G + ISW +LF ++ + Y+ +Y+ A +
Sbjct: 215 VGAFTFVYVFIPNTRVKLRYAFIGGLVAGISWQAAGMLFASFVAGSAKYAAIYSSFAIGI 274
Query: 250 TCLVFLYMLGVFFILG 265
L+++Y+ + +LG
Sbjct: 275 ILLIWVYLNWMILLLG 290
>gi|299066569|emb|CBJ37759.1| tRNA-processing ribonuclease BN [Ralstonia solanacearum CMR15]
Length = 438
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 99/267 (37%), Gaps = 9/267 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAW 70
A+ E+ +A ++ + +LS+ P + L Q + I +
Sbjct: 21 RYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFQSFRSAIEGYLFSNLV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P I++PI + Q + AKGL + S + + +LN +RV + R
Sbjct: 81 PGNISRPILTYLNQF-SHNAKGLTAAGLVGLVVTSVMTMLTVENALNAIWRVRQRRPLAQ 139
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + V V + V + A P + +L
Sbjct: 140 RVLVFWALVSFGPVLIGASLSVSSYLVSISAGYVAKLPYG------LGVVVGLVPILLSA 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ +++F+P + +++ + F +Y+ F TY+ +Y A++
Sbjct: 194 VAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGTFAALPI 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ + +LGA + A++ I
Sbjct: 254 FLLWIYVSWLVTLLGATIAATLPIIRQ 280
>gi|303242465|ref|ZP_07328946.1| ribonuclease BN [Acetivibrio cellulolyticus CD2]
gi|302589989|gb|EFL59756.1| ribonuclease BN [Acetivibrio cellulolyticus CD2]
Length = 281
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 65/274 (23%), Positives = 128/274 (46%), Gaps = 2/274 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ +++ D F ++D A+AS ++ +L++FPF++F NL ++ +
Sbjct: 9 RLINVVKDLYFRFNDDDVPALASQLAYYFILAIFPFLIFLINLVSLTPITS--EQALNDL 66
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I I QV + + S A + SSNG+ A+ SLN+AY E R
Sbjct: 67 SKIIPTAVYDIIRGVIGQVAQTNRETFLSFSMAATLWVSSNGMNAVVKSLNKAYDQHETR 126
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+++ R +S + + T++ + + + V F + ++ R +
Sbjct: 127 AFWKVRGLSIIATIAFAFTILFSFILLILGEIIGRNVFIFLGFSNSFKMLWPYIRFIIPV 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +FI ++ ++P + K + G +F+ W + ++LF+ Y+ FS YS+ Y +
Sbjct: 187 LIMFIVFTLLYRYMPNRRMKYYEVFAGSLFSSFGWFITSILFSLYVNNFSNYSSTYGSIG 246
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++LY + + +LG ELNAS+ K
Sbjct: 247 GIILLIIWLYWISIIILLGGELNASLAYNRIEHK 280
>gi|255065392|ref|ZP_05317247.1| YihY family protein [Neisseria sicca ATCC 29256]
gi|255050217|gb|EET45681.1| YihY family protein [Neisseria sicca ATCC 29256]
Length = 429
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 98/273 (35%), Gaps = 8/273 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
VF + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 33 KVFAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 92
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 93 VNQTIVPQGADMVFDYI-NAFRNQAGKLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 151
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V V+ A ++ + T
Sbjct: 152 RPWMMQFLVYWALLTFGPLSLGVGISFMV------GSVQDSALASFAPQWVVGLLQTLGT 205
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + L ++ F+P G + T LF Y+ F Y ++Y
Sbjct: 206 LFFATLLLWGLYRFVPNRFVPGRHAFIGALVTAFCLETARFLFAWYMGNFDGYRSIYGAF 265
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ LV+L +L + GA L +S+ +
Sbjct: 266 AAVPFFLVWLNLLWTLVLGGAVLTSSLSYWQGE 298
>gi|329296755|ref|ZP_08254091.1| hypothetical protein Pstas_09616 [Plautia stali symbiont]
Length = 290
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 101/281 (35%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F I E++ A +++ +LL++ P I L +
Sbjct: 7 LRHSAHAFFLWIKLLWRRIDEDNMTTQAGNLAYVSLLALVPLIAVVFALFAAFPVFSDIS 66
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + +F + I + Q +A K + + A+ + + ++ +LN
Sbjct: 67 VQLKNFIFTNFMPAAGDVIQRYLDQFVANVNK-MTAVGAVGLIVTALLLMHSVDSALNAI 125
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R + R + + + + L + + + + + + +I
Sbjct: 126 WRSDKPRPMVYSFAVYWMILTLGPLLAGASLAISSYLLSL------RWVNVTGVTSLIDQ 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ + ++ +P + L G + + + +G F Y+ FS+Y
Sbjct: 180 ALRIFPLVLSILAFWLLYSIVPTRRVPGHDALIGAVVAGLLFELGKKGFALYVTMFSSYQ 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y +LGAE+ ++ Y K+
Sbjct: 240 LIYGVLAVIPILFLWVYWTWCIVLLGAEVTVTLDDYRQLKQ 280
>gi|113867329|ref|YP_725818.1| ribonuclease BN [Ralstonia eutropha H16]
gi|113526105|emb|CAJ92450.1| Ribonuclease BN [Ralstonia eutropha H16]
Length = 448
Score = 135 bits (339), Expect = 8e-30, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 97/274 (35%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVI 63
V + A+ E+ +++ ++ + +L+V P + L F +
Sbjct: 15 LQKVRALARYALRRAGEDRLPQVSASLTFTTVLAVVPVLTVAFALLAAFPVFRDFRNAIE 74
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+F L + A A+GL + S + + +LN +RV
Sbjct: 75 AFLFQNLIPGNVSESIQRYLGMFAKSARGLTAMGLGGLMVTSVLTMLTVEDALNAIWRVK 134
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + V + + + A P LL+
Sbjct: 135 QRRPLAQRVLVFWAVLTFGPVLIGASLSISSYLISVSAGYVGTMPVGLGLLVGAT----- 189
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + F++ +P A + + + +++ F ++I Y+ +Y
Sbjct: 190 -PVLLSALAFAFLYTAVPNAYVEWRDAIVAGLVAAVAFEFAKRGFGYFITEIPAYTAVYG 248
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ +
Sbjct: 249 TFAALPLFLLWIYLSWLVTLLGATIAANLPVIRQ 282
>gi|257880157|ref|ZP_05659810.1| ribonuclease BN [Enterococcus faecium 1,230,933]
gi|257814385|gb|EEV43143.1| ribonuclease BN [Enterococcus faecium 1,230,933]
Length = 313
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + + + + ++ LLS+FP I+ N+ FL Q TV+ +
Sbjct: 2 RFIETTQKRITDSEMSTTSVVVAYYLLLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREV 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + I I +L + GL ++SALAA + +S + AL+I++N+AY V +++
Sbjct: 60 IPETVYQFIGPAIKDLLTQSSGGLLSVSALAALWSASQSINALQIAMNKAYGVENRKNFL 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I R S ++L + + ++ V L L ++ N + + T++AL
Sbjct: 120 IVRFFSLIVIVLFMIAISGVTIVLGLGQLILDAIQPIVQIPVNFIDQFQTLKWPITLVAL 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ + ++L +P A+ K+ +I+PG IF + W++ + +F+ Y F+T + Y + S +
Sbjct: 180 FVIMFLIYLIVPNAQLKLKTIIPGTIFATVGWMLLSQVFSIYARYFATRISGYQIIGSFI 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILG +NA + Y +
Sbjct: 240 VLMLWLNFAATIIILGGIINAVVQEYVTGHQ 270
>gi|288957833|ref|YP_003448174.1| ribonuclease [Azospirillum sp. B510]
gi|288910141|dbj|BAI71630.1| ribonuclease [Azospirillum sp. B510]
Length = 481
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 100/276 (36%), Gaps = 7/276 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
F + ++ F ++ + A+ ++ ++LL++ P + G + A + +
Sbjct: 47 FRELGGFFGHSMLRFYNDNCFQTAASLTYTSLLAIVPIMTIGFAVFSAFPAFSALQMRIQ 106
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V I I + + + +A A + + A + + + S +RV
Sbjct: 107 TAVIKNLVPEIGDAILEYLGRFMAN-AGQMPIFGVIGLAVSAVLLIWTIEGSFATVWRVR 165
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS+ L + V L + + + AL L ++ + +
Sbjct: 166 EPRSYVTRILSFWAVVSLTPLFAGASLSLSSTLWTALELA-----HLEGVVHPLAGIGML 220
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+G ++L +P + + L G I +F Y+ + Y T+Y
Sbjct: 221 LPFGLQLLGCSLLYLVIPNREVFWLDALCGGAIGSILLEGSKAIFGWYMREYPAYQTIYG 280
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+ + L +LY+ + GA + AS+ + K
Sbjct: 281 ALSVVPIFLFWLYIAWSTVLFGAVVTASLPEWRAGK 316
>gi|282890477|ref|ZP_06299000.1| hypothetical protein pah_c022o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499474|gb|EFB41770.1| hypothetical protein pah_c022o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 425
Score = 135 bits (339), Expect = 9e-30, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 105/266 (39%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + I A+ F+E D +A ++ ++ LLS+ P + +A G + +
Sbjct: 14 KLLKKIVRISKAAVWGFIEHDCYAKSASLAFYTLLSIVPVLAVAFGIAKGFGFQDALESS 73
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I F E+ + + + + + L + + + ++ SLN + +
Sbjct: 74 ILEKFQENKEITRQILEFANNTLHHAESSVIAGFGVLILFWSVFSLLGSIETSLNVIWHI 133
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS ++L+ + L I S V + + + + ++
Sbjct: 134 KIARSIGKKITHYLTLIILSPLLLAIGSSAIVFLAAQIRIATQAAIGTAVIHPVMVVIVN 193
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ +++ +I ++L +P + ++ + I + + ++ H + S+Y +Y
Sbjct: 194 FFSLVVSWILFSAIYLLIPNTQVQLRYGVFAGIIAGTFYQIVQWIYIHIQIYLSSYGAVY 253
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
LA+I ++L + + ++GAEL
Sbjct: 254 GSLAAIPLFFIWLQISWLIVLMGAEL 279
>gi|332526765|ref|ZP_08402867.1| putative ribonuclease BN [Rubrivivax benzoatilyticus JA2]
gi|332111168|gb|EGJ11200.1| putative ribonuclease BN [Rubrivivax benzoatilyticus JA2]
Length = 412
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 101/281 (35%), Gaps = 12/281 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-- 63
D + + F E+ AS ++ + L+++ P + + +
Sbjct: 27 WPWLDTLRTLRQRFREDRLGLTASSLTFTTLIALVPLVTVMLAVFTAFPIFAKFQIALEK 86
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P+ IA+P+ + Q A A ++ L + + + +LN +RV
Sbjct: 87 YFLQSLVPDTIARPVMRALTQF-ASQANRAGSVGLLFLGATALALMLTIDRTLNAIWRVR 145
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + L + + + + A + P +
Sbjct: 146 QPRPIAQRVLVYWAALTLGPLVVGVSLSMTSYALSASRGLVGVLPGG------VSAALNV 199
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A L L + ++P + G +F +++ Y+ YS++Y
Sbjct: 200 AEFALLAAALAGLFRYVPNTTVRWQHAWAGALFVAVAFEFAKEGLAWYVDKVPMYSSVYG 259
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA---SMIIYYWRKKP 281
AS+ L+++Y+ V +LGA + A S+ + R+ P
Sbjct: 260 AFASLPILLLWIYLSWVIVLLGAVIAAYAPSLQMRVVRRPP 300
>gi|254479831|ref|ZP_05093079.1| Ribonuclease BN-like family protein [marine gamma proteobacterium
HTCC2148]
gi|214039393|gb|EEB80052.1| Ribonuclease BN-like family protein [marine gamma proteobacterium
HTCC2148]
Length = 409
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 101/277 (36%), Gaps = 8/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
F ++ I F + A+ ++ +L ++ P + +A + Q V
Sbjct: 8 FFGIWHRIRYLFSRFKADRCSENAAALTYMSLFAMVPLLTVLYTMASAIPTFQGLEEQVQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+F + + I + AK L + + + + + N +R
Sbjct: 68 SFLFEHLMPDTSSEVESYISDF-SRQAKNLTGPGIIFLVITAVLMLRNIEKAFNMIWRAR 126
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS + L+ + + LA V L + + + + +F ++ +
Sbjct: 127 ENRSSVSSFLLYWAVLSLAPVALGLALGLSTYLSSFSQVLDQF-----DIFGVKALLLKL 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ ++ +P + + G + +++ LFT +V S+Y+ +Y
Sbjct: 182 TPLMLSTAAFTLLYAAVPNCRVPFKHTVVGGLVAALAFHAARALFTDLVVG-SSYTFIYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L+++Y+ ++G L S+ Y ++
Sbjct: 241 AFAAVPLFLLWIYLSWNIVLMGGILVHSLSGYQNEEQ 277
>gi|69244644|ref|ZP_00602908.1| Ribonuclease BN [Enterococcus faecium DO]
gi|257882958|ref|ZP_05662611.1| ribonuclease BN [Enterococcus faecium 1,231,502]
gi|257885209|ref|ZP_05664862.1| ribonuclease BN [Enterococcus faecium 1,231,501]
gi|257891460|ref|ZP_05671113.1| ribonuclease BN [Enterococcus faecium 1,231,410]
gi|258614499|ref|ZP_05712269.1| ribonuclease BN, putative [Enterococcus faecium DO]
gi|260560536|ref|ZP_05832710.1| ribonuclease BN [Enterococcus faecium C68]
gi|261206549|ref|ZP_05921249.1| ribonuclease BN [Enterococcus faecium TC 6]
gi|289565459|ref|ZP_06445908.1| ribonuclease BN [Enterococcus faecium D344SRF]
gi|293553216|ref|ZP_06673853.1| ribonuclease BN [Enterococcus faecium E1039]
gi|293560238|ref|ZP_06676738.1| ribonuclease BN [Enterococcus faecium E1162]
gi|293568268|ref|ZP_06679592.1| ribonuclease BN [Enterococcus faecium E1071]
gi|294614679|ref|ZP_06694581.1| ribonuclease BN [Enterococcus faecium E1636]
gi|294619024|ref|ZP_06698519.1| ribonuclease BN [Enterococcus faecium E1679]
gi|294620967|ref|ZP_06700166.1| ribonuclease BN [Enterococcus faecium U0317]
gi|314950073|ref|ZP_07853360.1| YihY family protein [Enterococcus faecium TX0082]
gi|68196235|gb|EAN10664.1| Ribonuclease BN [Enterococcus faecium DO]
gi|257818616|gb|EEV45944.1| ribonuclease BN [Enterococcus faecium 1,231,502]
gi|257821061|gb|EEV48195.1| ribonuclease BN [Enterococcus faecium 1,231,501]
gi|257827820|gb|EEV54446.1| ribonuclease BN [Enterococcus faecium 1,231,410]
gi|260073538|gb|EEW61866.1| ribonuclease BN [Enterococcus faecium C68]
gi|260079259|gb|EEW66950.1| ribonuclease BN [Enterococcus faecium TC 6]
gi|289162788|gb|EFD10639.1| ribonuclease BN [Enterococcus faecium D344SRF]
gi|291588980|gb|EFF20804.1| ribonuclease BN [Enterococcus faecium E1071]
gi|291592417|gb|EFF24024.1| ribonuclease BN [Enterococcus faecium E1636]
gi|291594685|gb|EFF26067.1| ribonuclease BN [Enterococcus faecium E1679]
gi|291599425|gb|EFF30443.1| ribonuclease BN [Enterococcus faecium U0317]
gi|291602626|gb|EFF32841.1| ribonuclease BN [Enterococcus faecium E1039]
gi|291605810|gb|EFF35244.1| ribonuclease BN [Enterococcus faecium E1162]
gi|313643608|gb|EFS08188.1| YihY family protein [Enterococcus faecium TX0082]
Length = 307
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + + + + ++ LLS+FP I+ N+ FL Q TV+ +
Sbjct: 15 RFIETTQKRITDSEMSTTSVVVAYYLLLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREV 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + I I +L + GL ++SALAA + +S + AL+I++N+AY V +++
Sbjct: 73 IPETVYQFIGPAIKDLLTQSSGGLLSVSALAALWSASQSINALQIAMNKAYGVENRKNFL 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I R S ++L + + ++ V L L ++ N + + T++AL
Sbjct: 133 IVRFFSLIVIVLFMIAISGVTIVLGLGQLILDAIQPIVQIPVNFIDQFQTLKWPITLVAL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ + ++L +P A+ K+ +I+PG IF + W++ + +F+ Y F+T + Y + S +
Sbjct: 193 FVIMFLIYLIVPNAQLKLKTIIPGTIFATVGWMLLSQVFSIYARYFATRISGYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILG +NA + Y +
Sbjct: 253 VLMLWLNFAATIIILGGIINAVVQEYVTGHQ 283
>gi|311893960|dbj|BAJ26368.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 336
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 90/274 (32%), Gaps = 2/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + DA F DG++ A ++ +L++ PF + LAG L V V+
Sbjct: 28 WWALARDAFVRFRYADGFSHARALAFQVVLALVPFTIAVVGLAGSLHGGPVGRLVAAVIE 87
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE + + + + + AL A + + NR Y + R
Sbjct: 88 RMVPEPSSDLVREVLDRGREHTGGTFALWFGALFALANLVTAMSQIERGANRIYGIERDR 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ S A + L V VA P A + F R +
Sbjct: 148 PFDRKYGRSLLMAAGAGLPLGAGFLVLVAGPQLAAAADEVFGLGPRTATAWTLLRWPVGV 207
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + P + + G + W+ L + Y+ ++ +Y L
Sbjct: 208 LLTLTSAAVIFRRAPRRRQPGYSWLAFGAGLYLVLWLAATWLLSLYLRLSGSFDAVYGPL 267
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + LV+ Y+ + LG A + +
Sbjct: 268 SAVFSLLVWAYLTAIALFLGLSFAAQLEAVRTAR 301
>gi|218708190|ref|YP_002415811.1| ribonuclease BN [Vibrio splendidus LGP32]
gi|254789783|sp|B7VHE7|Y126_VIBSL RecName: Full=UPF0761 membrane protein VS_0126
gi|218321209|emb|CAV17159.1| tRNA-processing ribonuclease BN [Vibrio splendidus LGP32]
Length = 313
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 38/278 (13%), Positives = 94/278 (33%), Gaps = 8/278 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + A +++ LLS+ P + ++ V
Sbjct: 12 IKKAATGSIQFSRYLLTRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSVFADVG 71
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
VI V + + +L+ +A + + ++ + + + +LN
Sbjct: 72 LVIQNFVITNFVPASGDAVHGALLEFVAN-TGKMTAVGSVFLFIAALMLISNIDKNLNYI 130
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+RV E R ++ + + + L + + + +
Sbjct: 131 WRVTEKRRAVLSFSMYWMVLTLGPILIGASIAATSYVTSL------NLLQNEVVSSAFNT 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ F ++L +P K G + + + + F YI F +Y
Sbjct: 185 VIRKLPLITSFFAFFGLYLLVPNKKIHFSHAAAGSLVAALLFELSKKGFAAYITQFPSYQ 244
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 245 LIYGALAAIPILFVWVYLCWLIVLVGAEVTAALGEQEQ 282
>gi|255523128|ref|ZP_05390100.1| ribonuclease BN [Clostridium carboxidivorans P7]
gi|255513243|gb|EET89511.1| ribonuclease BN [Clostridium carboxidivorans P7]
Length = 275
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 60/264 (22%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ D I F +D A+ S ++ + +LS FPFI+F L G + ++ +
Sbjct: 3 RLLLDLIYRFNNDDIPALGSQLAYNLVLSFFPFIIFLMTLIGHTSLNN--NEILLALSKI 60
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I+ + +V+ L + S + + +S+G + LN+AY V E RS+
Sbjct: 61 MPASAFNLISTTVSEVITTKHSQLMSFSLILTIWSASSGFTGIIKGLNKAYGVPESRSFI 120
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+IS + + ++IM F+ + + Y L+++ R + +
Sbjct: 121 KVRIISILCTIGMAFIILIMMFLLILGHIIWKYTAYKLSFAHRLIILWTLTRYFIFISTA 180
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ + P + + +LPG +F + ++ + F +Y+ F+ YS +Y + +I+
Sbjct: 181 VFIFTSLYRYAPCKRLTWLEVLPGSLFAILHLILVSTGFAYYVNNFANYSVIYGSIGAII 240
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L +L+++ + ILG E NAS+
Sbjct: 241 VLLTWLFLISIIVILGGEFNASLY 264
>gi|253577946|ref|ZP_04855218.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850264|gb|EES78222.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 298
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/267 (23%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+++ +E + A A+ + ++S P I+F L + V D +
Sbjct: 13 LLFGFMERVSGDHVGAYATQAAYFLIMSFIPCILFLTTLVRYTPL--TYNVVRDAIVAFI 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + + ++ V + + +SA+ A + + G++++ LN Y V E R+W +
Sbjct: 71 PENLQSFVLGIVVDVY-KRSTAIVPLSAIVALWSAGKGMQSIINGLNTIYHVKETRNWLL 129
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
TR+ + Y L + +++ + V V ++ P LG +L I R LF
Sbjct: 130 TRIYAVFYTLSLVIAVIVSLLMLVLGNEIQKVVSRYIPFLGRVLGKILGARALLVFGVLF 189
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + ++ LP K+ S +PG + ++W + + F+ Y F +S MY LA+I+
Sbjct: 190 LVFLMLYKVLPNRKATFKSQIPGALIIAVAWSIFSYGFSFYFEIFPGFSNMYGNLATIIM 249
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
+V+LY+ + GAE+NA +
Sbjct: 250 VMVWLYICMNLLLYGAEINAYFEKEFR 276
>gi|194466846|ref|ZP_03072833.1| ribonuclease BN [Lactobacillus reuteri 100-23]
gi|194453882|gb|EDX42779.1| ribonuclease BN [Lactobacillus reuteri 100-23]
Length = 296
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 68/269 (25%), Positives = 127/269 (47%), Gaps = 2/269 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I I+H + A+ ++ LLS+FP ++ NL +G T++ + A
Sbjct: 11 FIALLIQHITMAQISSSAAVLAYYTLLSIFPAVMVVGNLLPMIGIDA--KTILAYLSTAI 68
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE + I I L + G+ T AL A + +S G+ A + S+N AY + E ++ +
Sbjct: 69 PESVYSFIQPLIYDFLRRGSGGILTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPVM 128
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R++SF ++++ V + I+ ++ L ++ F + + I + R T LF
Sbjct: 129 NRIVSFVWMIVVLVIIFIIIILYGFGEQVLKSIQPIFNFRRDYIAIFSSLRWPVTFGVLF 188
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I L ++ F+P AK ++ L G + W+ + LF+ Y + FS Y + + +
Sbjct: 189 IALTLLYYFVPNAKVRLRYALAGSFLASLLWMGLSRLFSFYTLLFSHGVISYKTIGAFIA 248
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
+V+L G +LGA LNA++ + +
Sbjct: 249 MMVWLDFSGYIIMLGAALNAALQECHEGE 277
>gi|149175144|ref|ZP_01853767.1| hypothetical protein PM8797T_25731 [Planctomyces maris DSM 8797]
gi|148846122|gb|EDL60462.1| hypothetical protein PM8797T_25731 [Planctomyces maris DSM 8797]
Length = 301
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 103/272 (37%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D+I ++ + + A ++ + ++ + FP ++ L + +V + +
Sbjct: 25 LWDLIVRTLKGYDKHHLSAHSAQFAYYSIFTFFPLLIVIIGCLAQLPIRGVILSVENAIN 84
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ + +I + L A+ + + + L+ + V RS
Sbjct: 85 QGLPSNVSSMLFAQIEDIQQKTTLSLIGGGIFLLAWGGTRLFITMEVGLDSVFEVEHRRS 144
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + ++ + L+ S + V P + + + LL R
Sbjct: 145 FLRSGGLALLLTFGVLILLLTASILLVVGPEIASLLVANIHSTWIHLLFSAGARWSVACG 204
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ I ++ +P+ K PG +F ISWV+ F Y+ F+ Y+ Y +
Sbjct: 205 FMLISTSVIYWAVPSIKLPWKIFTPGSMFVIISWVLMLQGFRLYVENFAHYNETYGTIGG 264
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ LV+LY+ G + G E+N + K
Sbjct: 265 FIVLLVWLYLTGAILMTGGEINGVIYRAAKLK 296
>gi|150005250|ref|YP_001299994.1| ribonuclease BN [Bacteroides vulgatus ATCC 8482]
gi|254883717|ref|ZP_05256427.1| ribonuclease BN [Bacteroides sp. 4_3_47FAA]
gi|294777359|ref|ZP_06742811.1| YihY family protein [Bacteroides vulgatus PC510]
gi|319643442|ref|ZP_07998065.1| ribonuclease BN [Bacteroides sp. 3_1_40A]
gi|149933674|gb|ABR40372.1| ribonuclease BN [Bacteroides vulgatus ATCC 8482]
gi|254836510|gb|EET16819.1| ribonuclease BN [Bacteroides sp. 4_3_47FAA]
gi|294448827|gb|EFG17375.1| YihY family protein [Bacteroides vulgatus PC510]
gi|317384847|gb|EFV65803.1| ribonuclease BN [Bacteroides sp. 3_1_40A]
Length = 442
Score = 134 bits (338), Expect = 1e-29, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 92/276 (33%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I ++ F + AS ++ S LLS+ P + +A G + T
Sbjct: 32 RGILYNAIKIATLSVREFTQGRILNKASALTYSTLLSIIPILAILFAIARGFGFSNLLET 91
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + + + + + + + N ++
Sbjct: 92 QFRSGLEGQSAAAETILGLIDSYLVHAKSGIFIGVGLVMLFWTILSLTYNIERTFNYIWQ 151
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R+ Y F +LL + +V+ S + + + + + F L ++
Sbjct: 152 VKKPRTLYRKMTDYFSILLLLPLLIVLSSGLTIFMSTMVKNMEDFVL----LAPLMKFLV 207
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + +F+P K K+ + I ++ L+ + S Y+ +
Sbjct: 208 RLIPFILTWAMFTGLFVFMPNTKVKLKYAIIPGIIAGTAFQAFQYLYIGSQIWVSRYNAI 267
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A+I L++ + + GAEL
Sbjct: 268 YGSFAAIPMFLLWAQISWGICLYGAELCYVAQNLRN 303
>gi|227550490|ref|ZP_03980539.1| ribonuclease BN [Enterococcus faecium TX1330]
gi|257888517|ref|ZP_05668170.1| ribonuclease BN [Enterococcus faecium 1,141,733]
gi|257897108|ref|ZP_05676761.1| ribonuclease BN [Enterococcus faecium Com12]
gi|257899047|ref|ZP_05678700.1| ribonuclease BN [Enterococcus faecium Com15]
gi|293377331|ref|ZP_06623535.1| YihY family protein [Enterococcus faecium PC4.1]
gi|293572525|ref|ZP_06683504.1| ribonuclease BN [Enterococcus faecium E980]
gi|227180391|gb|EEI61363.1| ribonuclease BN [Enterococcus faecium TX1330]
gi|257824571|gb|EEV51503.1| ribonuclease BN [Enterococcus faecium 1,141,733]
gi|257833673|gb|EEV60094.1| ribonuclease BN [Enterococcus faecium Com12]
gi|257836959|gb|EEV62033.1| ribonuclease BN [Enterococcus faecium Com15]
gi|291607442|gb|EFF36785.1| ribonuclease BN [Enterococcus faecium E980]
gi|292644023|gb|EFF62129.1| YihY family protein [Enterococcus faecium PC4.1]
Length = 307
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 68/271 (25%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + + + + ++ LLS+FP I+ N+ FL Q TV+ +
Sbjct: 15 RFIETTQKRITDSEMSTTSVVVAYYLLLSLFPLIIAFGNILPFLHIDQ--ETVLTYLREV 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + I I +L + GL ++SALAA + +S + AL+I++N+AY V +++
Sbjct: 73 IPETVYQFIGPAIKDLLTQSSGGLLSVSALAALWSASQSINALQIAMNKAYGVENRKNFL 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I R S ++L + + ++ V L L ++ N + + T++AL
Sbjct: 133 IVRFFSLIVIVLFMIAISGVTIVLGLGQLILDAIQPIVQIPVNFIDQFQTLKWPITLVAL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ + ++L +P A+ K+ +I+PG IF + W++ + +F+ Y F+T + Y + S +
Sbjct: 193 FVIMFLIYLIVPNAQLKLKTIIPGTIFATVGWMLLSQVFSIYARYFATRISGYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILG +NA + Y +
Sbjct: 253 VLMLWLNFAATIIILGGIINAVVQEYVTGHQ 283
>gi|295397716|ref|ZP_06807788.1| YihY family protein [Aerococcus viridans ATCC 11563]
gi|294974045|gb|EFG49800.1| YihY family protein [Aerococcus viridans ATCC 11563]
Length = 329
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 55/266 (20%), Positives = 113/266 (42%), Gaps = 2/266 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
II + + + A+ +S LLS+FP ++ AN+ L +V+ ++
Sbjct: 11 RIIPMTLASVNQANIAGSAAEMSYYFLLSLFPLLMMIANIIPMLPFDP--DSVVGLLETL 68
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + I + L+ G ++S + + S ++ LNR Y + + ++
Sbjct: 69 LPDQVEPIIVPTLESYLSSDTTGALSVSFILILWSGSTAFGTVQNILNRTYGITDKPNFI 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I+RL SF + + V +S +FV L V +F L I + + +L L
Sbjct: 129 ISRLFSFAIAFVLVIFAVALSVLFVFGQTLLEAVNQFIDVPMQLFDIFTSVKWPILLLVL 188
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ F++ F+P K + +PG + + V + F+ Y+ F S + +
Sbjct: 189 ILVFTFIYQFIPHHKYPLKFAVPGAVVATLLSAVLSSGFSFYVNNFGGSSVSNGTIGVFI 248
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
+++L++ + I+GA +N +
Sbjct: 249 VLMIYLWLTSIVLIVGAMINHIIYRL 274
>gi|256822852|ref|YP_003146815.1| ribonuclease BN [Kangiella koreensis DSM 16069]
gi|288559224|sp|C7RCQ5|Y1635_KANKD RecName: Full=UPF0761 membrane protein Kkor_1635
gi|256796391|gb|ACV27047.1| ribonuclease BN [Kangiella koreensis DSM 16069]
Length = 397
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 93/275 (33%), Gaps = 11/275 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + + I F ++ AMA+ ++LS +L++ P + +L + + V
Sbjct: 1 MEKRWKWLKAFIKFVFIQFNQKQTSAMAAELTLSNMLALVPLMTVAVSLMAVFPSFEGVN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + + E L +K L I S + ++ S+N +
Sbjct: 61 TQVQALIFDNLMPETGLAVQEHLNEYVSKSKNLSAIGLGFLIVTSLLLMRSIDRSINALW 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R L + + +A + + L + +
Sbjct: 121 ETPTQRKGIHKILAYWAMLTMAPILIAASLAASSYFAT-----------LPIVSDLSGIL 169
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + +++ +P + + L + T I + F ++ FS+Y
Sbjct: 170 TFGLPFILIVLAFSALYMVVPYTQVRFYKALIAAVITAILFEAAKYGFAIFVTKFSSYEL 229
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y + +I +++Y+ +LG + + +
Sbjct: 230 IYGAITAIPIFFLWVYLSWSILLLGVIVCFGLHRF 264
>gi|85714544|ref|ZP_01045531.1| hypothetical protein NB311A_20216 [Nitrobacter sp. Nb-311A]
gi|85698429|gb|EAQ36299.1| hypothetical protein NB311A_20216 [Nitrobacter sp. Nb-311A]
Length = 305
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 58/274 (21%), Positives = 114/274 (41%), Gaps = 9/274 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
I+ + + A+A+ ++ LL+VFP + +L G + +D
Sbjct: 16 RSWKQILAGTYKSISADRVLAVAAGVTFYGLLAVFPAVAALVSLYGLFADPVAIKRHLDQ 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + + + +I +V + L I A + ++ GV+A+ ++N AY
Sbjct: 76 LSWLLPGGVVQVVGGQIQRVSSAGTGTLGVSFIIGVAIAIWGANAGVKAVFDAINVAYGA 135
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS+ LIS + L A +I V +P+ L + ++ GR
Sbjct: 136 NEERSFVKLNLISLAFTLGAIAFAIIALATVVVLPVFL----QCAGLDALFDALLRYGRW 191
Query: 183 YATMLALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
LA+ I L ++ F P K I G + W+ + +F+ Y F +++
Sbjct: 192 PLIWLAIAIALSLLYRFGPTDSLDPKWRWITWGSALASLLWLAASAIFSWYAANFGSFNA 251
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L + + + ++++ + +LGAELN+ +
Sbjct: 252 TYGSLGAAIGFMTWMWISAIVIMLGAELNSEIEE 285
>gi|293610867|ref|ZP_06693167.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827211|gb|EFF85576.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 415
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 35/280 (12%), Positives = 100/280 (35%), Gaps = 4/280 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFVLYVFKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + D+ L + L I L + + ++ NR +
Sbjct: 69 QQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E RS + + + + L + L + + F + ++
Sbjct: 129 RVKETRSGIMGFMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFLL--- 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +G ++ +P + + + + + + F+ + F++Y
Sbjct: 186 -WLISFVLTILGFFILYWTIPNRTVPVYAAGIAACLSAVLFEILKNFFSFVMSNFTSYEI 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 245 IYGAFAAVPIFLLWIFLSWNIILLGVEVSFALTAFHSGKE 284
>gi|193212993|ref|YP_001998946.1| ribonuclease BN [Chlorobaculum parvum NCIB 8327]
gi|288559217|sp|B3QP93|Y1343_CHLP8 RecName: Full=UPF0761 membrane protein Cpar_1343
gi|193086470|gb|ACF11746.1| ribonuclease BN [Chlorobaculum parvum NCIB 8327]
Length = 426
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 100/271 (36%), Gaps = 10/271 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAW 70
+ HFV ++ A ++ LLS+ P + ++ + D +F +
Sbjct: 26 LSFMARHFVHDNILMSAGSLAFQTLLSLVPLMAVSLSILRVFPVFGSLKQNIGDFLFQNF 85
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + + + + L T+ + + + + +LN + V R
Sbjct: 86 APAQGALMKTYLWEFIDKTS-SLSTVGGIFLIVIALFLISTIDHTLNGIWEVQAPRKVMQ 144
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + L + + A +YV A G LL Y ++
Sbjct: 145 GFTLYWTVLTLGPLLIGTSVV-------ASSYVWYSVFAGGELLQQKVTVLSYLPLINTA 197
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I L +++ +P K + L G + + + + F Y+ F+T+ +Y L+ +
Sbjct: 198 IALFLLYMVVPNRKVRFRHALAGGVLAALLFELAKRWFAFYVANFATFEAIYGALSVVPM 257
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++Y+ V + GAE S+ Y+ ++P
Sbjct: 258 LFFWIYLEWVVVLTGAEFVFSLG-YFNPEEP 287
>gi|146343275|ref|YP_001208323.1| ribonuclease BN-like family transmembrane protein [Bradyrhizobium
sp. ORS278]
gi|146196081|emb|CAL80108.1| putative ribonuclease BN-like family transmembrane protein
[Bradyrhizobium sp. ORS278]
Length = 301
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 117/279 (41%), Positives = 170/279 (60%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +F ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGFLG+
Sbjct: 6 KALRYIFHVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFLGSKDLADQA 65
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ WP +A +T EI VL TI A+ A YF+SNGVEALR++LNRAY V
Sbjct: 66 ATLILETWPAQVADALTGEIHDVLTTTRTDALTIGAVLAVYFASNGVEALRVALNRAYGV 125
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGR 181
+E R WY RL S GY L+A+VT + MSF+ V PL LA R+F P + + R
Sbjct: 126 IEQRRWYWLRLESIGYTLVAAVTALAMSFLIVLGPLMLATARRFLPLAVDANERFVNLSR 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ AL + L +H +LPA + M I+PG++FT+++ +V ++F Y+ F+ Y T
Sbjct: 186 YGITISALIVALFILHAWLPAGRRSFMQIMPGIVFTFVASLVSGIVFGQYLARFANNYVT 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNAS+I +
Sbjct: 246 MYAGLASVIIALVFLYFIAAIFVYGGELNASIIKSRLPR 284
>gi|304320880|ref|YP_003854523.1| hypothetical protein PB2503_06577 [Parvularcula bermudensis
HTCC2503]
gi|303299782|gb|ADM09381.1| hypothetical protein PB2503_06577 [Parvularcula bermudensis
HTCC2503]
Length = 318
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 108/275 (39%), Gaps = 8/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ + +++ +A+ ++ A LSVFP +V L G + + I
Sbjct: 21 LKRWRKAVFSLLGRIGQDNLSLVAAGVAFFAFLSVFPALVALVGLVGLIADPVDIVDGIA 80
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYR 121
V+ P I E+ ++ +GL + A + ++ GV+ +L +
Sbjct: 81 VLAPVLPPNALDLIQTELSRIAEGRGEGLLVTTLFSLSIALWSANRGVKNFAFALTIVHD 140
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R+ + +IS + + V IP+ L ++ +I +
Sbjct: 141 ETTSRNIVVINVISLALTAIMLFGAIAALSVVAIIPIGLQFL----GLPNGAERLISIAQ 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + V + P ++ PG + I WV ++LF++Y+ + +S
Sbjct: 197 WIFLFVLIVALATVVLKWAPDRRAPTWRWSWPGALLGTILWVGTSLLFSYYVRHVNNFSA 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA++ +++ Y+ F++G ELNA++
Sbjct: 257 TYGSLATVTVVMLWSYLSAFVFLIGGELNAALERQ 291
>gi|121610705|ref|YP_998512.1| putative ribonuclease BN [Verminephrobacter eiseniae EF01-2]
gi|288559244|sp|A1WPD7|Y3782_VEREI RecName: Full=UPF0761 membrane protein Veis_3782
gi|121555345|gb|ABM59494.1| tRNA-processing RNAse BN [Verminephrobacter eiseniae EF01-2]
Length = 417
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 95/258 (36%), Gaps = 9/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
E F + AS ++ + +L++ PF + + + +V P+ I
Sbjct: 35 ERFRADHLGLTASSLTFTTILALVPFFTVALAVFTAFPIFGQLQDALQGWLVSSLVPDSI 94
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q A A GL + + + +LN +RV +R LI
Sbjct: 95 ARQVLGYLTQF-AAKASGLGLAGFSVLLVTALALILTIDRTLNDIWRVQRLRPLGQRVLI 153
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + + A + K P + + L G+
Sbjct: 154 YWAAITLGPLLLGASLALTSYVMSASGGLVKRLPDG------VRFLFDSLQFMVLAAGMA 207
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + + Y+ TYS +Y A++ LV+
Sbjct: 208 LLYHYVPNTPVRWRHAWSGGLFVALCIELAKKALALYLGRVPTYSVVYGAFATLPILLVW 267
Query: 255 LYMLGVFFILGAELNASM 272
+YM V +LGA + A +
Sbjct: 268 IYMAWVIVLLGAVVTAYL 285
>gi|75674946|ref|YP_317367.1| ribonuclease BN [Nitrobacter winogradskyi Nb-255]
gi|74419816|gb|ABA04015.1| ribonuclease BN [Nitrobacter winogradskyi Nb-255]
Length = 297
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 111/279 (39%), Positives = 169/279 (60%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
++ I DA F+ +DGWA+ASHI+LSAL+++FPF++ LAGF G+ +
Sbjct: 2 RQIRDLYTIGTDAFYTFLADDGWAIASHIALSALMALFPFLIVLTALAGFFGSKELADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
D++ WP+ +A ++ EI VL T+ + A YF+SNGVE+LR++LNRAY V
Sbjct: 62 ADLMLQIWPDQVANTLSREIHDVLTTSRGDALTVGLVLAVYFASNGVESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGR 181
+E R WY RL S GY L+A+VT + M+F+ V PL +A R+ P + ++ R
Sbjct: 122 IEPRRWYWLRLESIGYTLVAAVTTLAMAFLIVLGPLIIAAARRHVPLIVESNESLLNIAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+LA+F L+ +H +LPA + + I+PG+IFT ++ ++ V F Y+ F+ Y T
Sbjct: 182 YGITILAMFTALVILHAWLPAGRRSFVQIIPGIIFTMLASLISGVGFGLYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I +
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVFGGELNAAIIKSRLPR 280
>gi|316935505|ref|YP_004110487.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
gi|315603219|gb|ADU45754.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
Length = 319
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 111/272 (40%), Gaps = 8/272 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ D + +A+ + LL +FP I + + + +
Sbjct: 43 VFADTYARIGGDRLLLVAAGVVFYWLLGLFPAITALVSSYALFADPVTISGHLAQLSAVV 102
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I +++ +VLA L + A + ++ GV+A+ +LN Y V E R
Sbjct: 103 PAGTYSVIEEQVGRVLANGQTRLGFAFLVSLSLALWSANGGVKAIIDALNAVYDVEEERG 162
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ S L A ++ + +A P+ LA + + ++I GR L
Sbjct: 163 FFKLNAFSLLLTLGALGAVLAAIGLVIAAPIVLAQI----GLGSLVAVVIDYGRWPVLAL 218
Query: 188 ALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
F GL ++ +LPG + +SW+ G+ ++Y+ F+ Y+ Y L
Sbjct: 219 LTFAGLGLLYRTAANRPSPPWRWVLPGSVAATLSWLAGSAALSYYLANFADYNATYGSLG 278
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + +++++M + ++G ELNA++ R
Sbjct: 279 AAIGLMIWMWMTAIVVLVGGELNAAIEARAGR 310
>gi|332995314|gb|AEF05369.1| hypothetical protein ambt_19390 [Alteromonas sp. SN2]
Length = 294
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 107/272 (39%), Gaps = 8/272 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFG 68
D+ I+ E++ A H++ LLS+ PFI+ + A V + +F
Sbjct: 19 DLFTIFIKRCREDNITISAGHLAYVTLLSLVPFIMVTFTIMSAFPAFASVRGKLEYFIFN 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + + + + + I L+ + + + +LNR +R R
Sbjct: 79 NFVPTASDTVHEYMSDFVGNAS-EMGAIGILSLLVVALMLISNVDKTLNRIWRTQSDRPI 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
T I + + L + + + + A+ ++ P LG LL + A
Sbjct: 138 VYTFAIYWMVITLGPLLIGSSVIISSYLAGLAAFAEEYTPGLGTFLLTL------VPSFA 191
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ +++ +P + + G I +++ + F YI F +Y +Y LA +
Sbjct: 192 AMLAFFILYMIVPNRRVFARHAISGAILATVAFELTKSGFALYITNFPSYELIYGALAVV 251
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y+ + +LGAE S+ + +K
Sbjct: 252 PILFLWVYISWILVLLGAEFTCSLGQAFENRK 283
>gi|17546278|ref|NP_519680.1| ribonuclease BN transmembrane protein [Ralstonia solanacearum
GMI1000]
gi|81505092|sp|Q8XZ47|Y1559_RALSO RecName: Full=UPF0761 membrane protein RSc1559
gi|17428575|emb|CAD15261.1| putative ribonuclease bn transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 441
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/267 (17%), Positives = 98/267 (36%), Gaps = 9/267 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAW 70
A+ E+ +A ++ + +LS+ P + L Q I +
Sbjct: 21 RYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFQSFRAAIEGYLFSNLV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P I++PI + Q + AKGL + S + + +LN +RV + R
Sbjct: 81 PGNISRPILTYLNQF-SHNAKGLTAAGLVGLVVTSVMTMLTVENALNAIWRVRQRRPLAQ 139
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + V V + V + A P + +L
Sbjct: 140 RVLVFWALVSFGPVLIGASLSVSSYLVSVSAGYVAKLPYG------LGVVVGLVPILLSA 193
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I +++F+P + +++ + F +Y+ F TY+ +Y A++
Sbjct: 194 IAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGTFAALPI 253
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y+ + +LGA + A++ I
Sbjct: 254 FLLWIYVSWLVTLLGATIAATLPIIRQ 280
>gi|289581131|ref|YP_003479597.1| ribonuclease BN [Natrialba magadii ATCC 43099]
gi|289530684|gb|ADD05035.1| ribonuclease BN [Natrialba magadii ATCC 43099]
Length = 484
Score = 134 bits (337), Expect = 2e-29, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 90/268 (33%), Gaps = 18/268 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E +++ ++ +S+ P ++ +A +G V +
Sbjct: 13 RRIVRLARTEQLTLLSAGVAFYGFISLVPLMLLALGIAASIGGDALVNQLTAGAGDVLTP 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + I V + + AL + +S + L + + Y +S T
Sbjct: 73 AAQEVLAETI--VDDTGRQSATVVGALGLLWGASRVLRGLDRAFSEVYGTAGSKSLLDTF 130
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ L A + + + ++ +LALF+
Sbjct: 131 WDAMVVFLAI---------------SAGLALVGGLELVIQFVPVVRAIGPLFILLALFVM 175
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ P +PG + + W+ + F+ Y +T +Y L ++ L
Sbjct: 176 FLPLYIVFPGKDVGFREAIPGALLAAVGWLALSRAFSLY-ANVATGYALYGALGAVFLVL 234
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKK 280
++LY + I GA NA + ++
Sbjct: 235 IWLYAGAIILIFGAICNAVLAGREVDRQ 262
>gi|168830314|gb|ACA34411.1| Rpn [uncultured bacterium pTW2]
Length = 452
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFG 68
F+++ + A +S + + ++ P + + A + D +F
Sbjct: 49 SFFAFLWRRFLDDRLFEAAGALSYTTVFALVPLSMVVFGVLSAFPAFNDWSGQLSDYIFS 108
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ A+ + + Q+ A L T +A + + + NR +RV R
Sbjct: 109 NFVPSSARRVEGYLRQISGN-AGQLTTAGVIALVASLLITLTGVEATFNRIWRVRTARPK 167
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L+ + + L ++ + + + AL ++ A M
Sbjct: 168 FTRFLVYWTVLTLGALVAATSLALSTRFFALAVFETEPGRALEAVM------LRLAPMTI 221
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ +P K + G + + + + V Y+ +F Y +Y LA +
Sbjct: 222 ELAAFAAIFRVVPHRTIKWRHAMVGALLSVLLFEVVKWGIALYLGSFGAYQKIYGPLAFV 281
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
L+++Y V +LGA ASM + +
Sbjct: 282 PVFLLWIYFGWVSILLGASFAASMSAFRY 310
>gi|260549795|ref|ZP_05824011.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter sp.
RUH2624]
gi|260407045|gb|EEX00522.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter sp.
RUH2624]
Length = 415
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 101/280 (36%), Gaps = 4/280 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I I+ F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFILFVIKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + D+ L + L I L + + + NR +
Sbjct: 69 QQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTTIETVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E RS + + + + L + L + + F + ++
Sbjct: 129 RVKETRSGIVGFMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFLL--- 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +G ++ +P + S + + + + LF+ + F++Y
Sbjct: 186 -WLISFVLTVLGFFILYWTIPNRTVPLFSAAIAACLSAVLFEILKNLFSFVMSNFTSYEI 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 245 IYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKE 284
>gi|313156838|gb|EFR56278.1| YihY family protein [Alistipes sp. HGB5]
Length = 434
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 96/271 (35%), Gaps = 9/271 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + +++ +E ++ ++ L+S+ P + + G +
Sbjct: 28 RWLVQQYRLLFYTARGLLEHGMIVRSAALTFYTLMSLVPIVAVVFAVVKGFGLADGLIDN 87
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +F PE+I + + + ++ + + ++ + N + V
Sbjct: 88 LYALFPQNPEIIDYVVGFAEKALARTQGGVVAAVALVMLFWAIIRVFGSIESAFNNIWEV 147
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS V++ V V+ + V L + ++ L
Sbjct: 148 KVERSVTRQYTDYIAVVMIVPVLWVVANAVGNYTQQLLGFDGSWYFDL---------LSR 198
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+A+M +++ +++ +P K K S L I +++ + + ++Y+ +Y
Sbjct: 199 FASMFIIWVMFTILYIIIPNTKVKFKSALMAGIVAGTLFLLFQWGYIYIQRWMTSYNAIY 258
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
A++ L++L + G EL+ +
Sbjct: 259 GSFAALPLLLIWLQTSWQILLFGGELSFAYQ 289
>gi|331701997|ref|YP_004398956.1| ribonuclease BN [Lactobacillus buchneri NRRL B-30929]
gi|329129340|gb|AEB73893.1| ribonuclease BN [Lactobacillus buchneri NRRL B-30929]
Length = 299
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 58/279 (20%), Positives = 117/279 (41%), Gaps = 2/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + V + I I+ + D A+ ++ LLS+FP ++ H +
Sbjct: 1 MKRLYEAVKNFIEIIIKRYSSGDVSDSAAVLAFYTLLSIFPIFFIVGSILNLFHIH--IT 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + +P+ I + I L ++ + + +S + A + S+N+ Y
Sbjct: 59 EVEVYLRPLFPDRIYSMLEPIINSTLQSGGASQLSVGLIVTIWSASRAIAAFQRSINKTY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V ++ RLISF ++L+ + LV++ VF + ++ G +L +I
Sbjct: 119 GVAADQTAISNRLISFVWMLVLVLALVVLMMVFAFGQMFFQWLTPILNVPGWILNLISTV 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T+ ++ L + F+P AK K + G + + ++ A FT Y+ FS
Sbjct: 179 KWPGTIAVSWLLLSLLFYFVPTAKVKFRYVWVGALIATLGLMLLAQAFTVYLKFFSQRID 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + + +L GV + G +NA++ K
Sbjct: 239 AYKTIGTFIVLMFWLDFSGVIMLFGGVVNATIQEIRQGK 277
>gi|220907293|ref|YP_002482604.1| ribonuclease BN [Cyanothece sp. PCC 7425]
gi|219863904|gb|ACL44243.1| ribonuclease BN [Cyanothece sp. PCC 7425]
Length = 306
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 101/283 (35%), Gaps = 12/283 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
++ + + E+ +A+ ++ + S+ P ++ +AG G +
Sbjct: 2 RLRDSLRLLKETFAEWNEDQVPLLAAALAYYTVFSLAPLLLIAIAIAGAVFGEQAARGEI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAY 120
I + A+ I + + G + +S L+ +LN +
Sbjct: 62 IGQIQSLVGSQGAEAIQTMLQNAQKPESGGNWATIFGVITLLLGASGVFGQLQQALNTIW 121
Query: 121 RVVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
V RS+ +R +SF VL+ L++ + A+ + P +L
Sbjct: 122 EVKPKPGQGLRSFLQSRFLSFAMVLVMGFLLLVSLVLTAALAAIGHFFGNLIPG---FML 178
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ +++ + + ++ LP K ++ G T + + +G L Y+ +
Sbjct: 179 LWQTLNFVISLVVITVLFAAIYKVLPDVKVPWKNLWVGAGVTALLFSLGRFLIGLYLGS- 237
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
S ++ Y S++ L++++ + GAE Y
Sbjct: 238 SGVTSTYGAAGSLVVILIWVFYSAQIILFGAEFTQVYSKYRGE 280
>gi|15603481|ref|NP_246555.1| ribonuclease BN [Pasteurella multocida subsp. multocida str. Pm70]
gi|32699647|sp|Q9CKJ9|Y1616_PASMU RecName: Full=UPF0761 membrane protein PM1616
gi|12722013|gb|AAK03700.1| Rbn [Pasteurella multocida subsp. multocida str. Pm70]
Length = 316
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 101/276 (36%), Gaps = 10/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
M + F + A +++ S +L++ P ++ ++ V
Sbjct: 1 MNNVLKNAGLFLRLFWLRFQQNKLSQAAGYLTYSTMLALVPLVMVVFSVFSAFPVFNEVT 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + I + ++ +K + + ++ + + ++ +LN
Sbjct: 61 DELKGFIFNNFAPQASDMVGQYIDEFVSN-SKQMSAVGVISLVVVALMLINSIDRTLNSI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R + I + + L + + V I L L
Sbjct: 120 WHDTTIRPLVFSFAIYWLILTLGPLLIGASIGVSSYIAAMLNENISLPFGLK-------- 171
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ ++ +P K KIM G + + + +G F Y+ TF +Y
Sbjct: 172 ILSFVPFFLTWLIFTLIYTVVPNKKVKIMHSAIGALVAAVFFTLGKQAFLWYVTTFPSYQ 231
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y +A++ L+++ + V ++GA+L + + Y
Sbjct: 232 LIYGAMATLPIMLLWIQLSWVVILIGAQLASVLADY 267
>gi|315125295|ref|YP_004067298.1| ribonuclease BN [Pseudoalteromonas sp. SM9913]
gi|315013808|gb|ADT67146.1| ribonuclease BN [Pseudoalteromonas sp. SM9913]
Length = 293
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 99/265 (37%), Gaps = 6/265 (2%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
+++ A +++ LLS+ P I G + + I+ +
Sbjct: 27 FNRCIDDQITINAGYLAYVTLLSLVPLIAVGVAIFSAFPGFESTRLAIESFLFTNFVPTS 86
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ E + A A + + A + + + +LNR +RV + R I+ +
Sbjct: 87 SGVIKEHISSFASNANQMTAVGIGFLAAIALLLIRNVDATLNRIWRVKKKRPMMISFAVY 146
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ + L V L V I +++ + P G I
Sbjct: 147 WMVLSLGPVLLGASIGVTSYIVSLVSFADQGIPGFSGF------LLKLLPYAISMAGFIM 200
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +P + + +PG +F + + + F YI F +Y +Y +A+I V++
Sbjct: 201 LYTLVPNTRVSFKAAVPGALFAAMLFELTKKGFALYISHFPSYEVIYGAVATIPILFVWV 260
Query: 256 YMLGVFFILGAELNASMIIYYWRKK 280
Y+ V +LGAE + + ++ KK
Sbjct: 261 YLSWVVVLLGAEFTVCINMQHYNKK 285
>gi|90418166|ref|ZP_01226078.1| putative ribonuclease, BN-like family [Aurantimonas manganoxydans
SI85-9A1]
gi|90337838|gb|EAS51489.1| putative ribonuclease, BN-like family [Aurantimonas manganoxydans
SI85-9A1]
Length = 317
Score = 134 bits (336), Expect = 2e-29, Method: Composition-based stats.
Identities = 78/265 (29%), Positives = 144/265 (54%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ V+ ++ +AI +D +A +I+ A+L++FPF++F ++L F+G + ++
Sbjct: 33 WRAVWAVLREAILRLWNDDAMGLAGNIAFRAVLAIFPFLIFASSLTAFIGNREMADGLVT 92
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P +A+P+ E++ ++ + G+ ++ L +F+ GV+ +R+ LNRAY + E
Sbjct: 93 FLIAIVPPALAEPLVSEVMNIVTIRRGGVLSVGVLLTIWFAIGGVDGVRVGLNRAYDIRE 152
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS + L+ V+L + LV++ ++ V P A +++ + P + R A
Sbjct: 153 TRSTIVLYLLQVLTVVLTGLVLVVVGYLLVLAPRAGSFLHQLMPGFQPSSVTPSLVRYPA 212
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
T L L H+FLPA +S+ ++ PG++FT +W F+ YI F+ Y++ YAG
Sbjct: 213 TAAILTTALFVAHVFLPARRSRFSNMWPGILFTLCAWSALVAAFSVYIGQFANYASYYAG 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
LA I+ L FLY+ + I G ELN
Sbjct: 273 LAGIIAALYFLYLAALVLIFGGELN 297
>gi|316936222|ref|YP_004111204.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
gi|315603936|gb|ADU46471.1| ribonuclease BN [Rhodopseudomonas palustris DX-1]
Length = 297
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 110/279 (39%), Positives = 163/279 (58%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF+G+ +
Sbjct: 2 RQIRTAYAVAVDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFIGSRELADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ EI VL G+ TI L A YF+SNGVE+LR+ LNRAY V
Sbjct: 62 AELLLDVWPAQVASTLSGEIHDVLTTTRGGVLTIGLLLALYFASNGVESLRVGLNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGR 181
VE R WY+ RL S GY L+A+ T + M F+ V PL LA R + P + N ++ R
Sbjct: 122 VEPRPWYLLRLESIGYTLVAAFTALAMGFLIVLGPLILATARHYVPVLVQNNEPLLTIAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
+ AL + L +H +LPA + ILPG++FT + ++ V F Y+ F+ Y T
Sbjct: 182 YGIAITALTVALFLLHAYLPAGRRSFKQILPGIVFTIAASLISGVAFGMYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGL S++ LVFLY + F+ G ELNA++I +
Sbjct: 242 MYAGLGSVIIALVFLYFIAAIFVYGGELNAAIIKSRLPE 280
>gi|300857074|ref|YP_003782058.1| putative ribonuclease BN [Clostridium ljungdahlii DSM 13528]
gi|300437189|gb|ADK16956.1| predicted ribonuclease BN [Clostridium ljungdahlii DSM 13528]
Length = 275
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 58/268 (21%), Positives = 119/268 (44%), Gaps = 2/268 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + I F+++D A+AS ++ S L S+FPF+VF +L G+ + ++ ++ P
Sbjct: 9 LKEFIFRFIQDDVLALASQLAYSLLFSIFPFLVFFISLIGY--SDISSNDILLILSNVLP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + I + +++ L +S + + S G A+ LN+AY E RS +
Sbjct: 67 KNALELIENTVIKTANSKNIELLCLSLILTLWALSGGFHAVIKGLNKAYDQRETRSIFKI 126
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+IS L ++ ++ V + +++ + R +
Sbjct: 127 YIISILCTLGVTLIILCTLLFLVFGQMIGSFLAFRLGLSEGFGFLWNILRYVIIFFGTIL 186
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
V++F P + +LPG +F+ I V+ ++ F Y+ F YS +Y + +++
Sbjct: 187 IFAAVYIFTPNVRLTWRKVLPGAVFSTIGIVIASMGFAFYVNNFGNYSKIYGSIGAVIIL 246
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L +L++L ILG E N+ + +
Sbjct: 247 LTWLFILSTITILGGEFNSVLFKREKNR 274
>gi|91205490|ref|YP_537845.1| putative ribonuclease BN [Rickettsia bellii RML369-C]
gi|157827145|ref|YP_001496209.1| putative ribonuclease BN [Rickettsia bellii OSU 85-389]
gi|91069034|gb|ABE04756.1| Putative ribonuclease BN [Rickettsia bellii RML369-C]
gi|157802449|gb|ABV79172.1| Putative ribonuclease BN [Rickettsia bellii OSU 85-389]
Length = 281
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 83/275 (30%), Positives = 137/275 (49%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 KKIFNCLYIALFKTIEHDGVEHSGYMSFMVLLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+VP + L ++ + + + +S+ VE LR LNR Y +
Sbjct: 62 FLESMPERATESIEKRIKELLSVPPQSLMNLAVVGSVWTASSFVECLRTILNRVYEIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S+ + F+ V IP+ + + I+ R
Sbjct: 122 PPYIRRRLLSILQFLVISILITFTMFLLVFIPIVFTKIPVLLETIEQYKNILNFIRYVLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L
Sbjct: 182 LVLLFLGASSLYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
SI+ L+F Y++ + FI GAE N M Y KK
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNYNIVKK 276
>gi|163735479|ref|ZP_02142912.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
gi|161391292|gb|EDQ15628.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
Length = 302
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 50/268 (18%), Positives = 114/268 (42%), Gaps = 9/268 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ A+ + +A+ ++ ++LS+FP + + + + V + + P
Sbjct: 14 LFAAVGQVGRSNLALIAAGVAFYSMLSIFPALAALIAVLSLIADPEVVIVQLSELQELMP 73
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + +I+ +++ + L L A + + GV A+ LN Y + R
Sbjct: 74 DDVYDILNAQIVGLVSTSSDTLGWTGIVSVLVALWSARAGVGAMMHGLNVVYAT-DSRGT 132
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L + + ++ V P+ LA++ G +II R +
Sbjct: 133 WRHYLRAVLLTISLVAVGIVALLALVIAPVILAFLA----LGGFTSVIIDLLRWGLGIAV 188
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F G+ ++ F P + + PG +F +SW ++ F++Y+ F Y+ +Y + +
Sbjct: 189 IFAGIGMLYRFGPNRRPENTRFLTPGSVFAAVSWAALSIAFSYYVTHFGNYNEVYGSIGA 248
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
++ LV+L++ + GA LNA +
Sbjct: 249 VIAMLVWLWISSFLVLFGAALNAEIEAR 276
>gi|115526840|ref|YP_783751.1| ribonuclease BN [Rhodopseudomonas palustris BisA53]
gi|115520787|gb|ABJ08771.1| ribonuclease BN [Rhodopseudomonas palustris BisA53]
Length = 297
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 108/279 (38%), Positives = 167/279 (59%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+D+ DA F+ +DGWA+ASHI+LS+L+++FPF++ ++AGF+G+
Sbjct: 2 RQIRYAYDVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSIAGFVGSKNLADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ +I VL TI L A YF+SNGVE+LR++LNRAY V
Sbjct: 62 AELMLQIWPVQVADALSVQIHDVLTTTRGDALTIGLLLAIYFASNGVESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGR 181
V+MRSWY RL S GY ++A+ T + M+F+ V PL L R++ P + + ++ R
Sbjct: 122 VDMRSWYWLRLESIGYTMVAAFTALAMAFLIVLGPLLLETARRYVPLMVESNETLLTVVR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYST 240
T+ A+ + L +H +LP + ILPG++FT ++ ++ V F Y+ F S Y T
Sbjct: 182 YGITIAAMTVALFILHAWLPCGRRTFRQILPGIVFTMLASLLSGVGFGMYLARFASNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I K
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPK 280
>gi|288576153|ref|ZP_05978283.2| YihY family protein [Neisseria mucosa ATCC 25996]
gi|288566202|gb|EFC87762.1| YihY family protein [Neisseria mucosa ATCC 25996]
Length = 418
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 97/268 (36%), Gaps = 8/268 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
VF + + F EE AS ++ + LL++ P + +A + + +
Sbjct: 22 KVFAFAWFVVRRFDEERVPQAASSMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVAF 81
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 82 VNQTIVPQGADMVFDYINAFRD-QAGKLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNTQ 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V V+ A ++ + T
Sbjct: 141 RPWMMQFLVYWALLTFGPLSLGVGISFMV------GSVQDSALASFAPQWVVGVLQTLGT 194
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + L ++ F+P G + T LF Y+ F Y ++Y
Sbjct: 195 LFFATLLLWGLYRFVPNRFVPARHAFIGALVTAFCLETARFLFAWYMGNFDGYRSIYGAF 254
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
A++ LV+L +L + GA L +S+
Sbjct: 255 AAVPFFLVWLNLLWTLVLGGAVLTSSLS 282
>gi|283787447|ref|YP_003367312.1| tRNA-processing ribonuclease BN [Citrobacter rodentium ICC168]
gi|282950901|emb|CBG90578.1| tRNA-processing ribonuclease BN [Citrobacter rodentium ICC168]
Length = 290
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R + + + + E++ +A +++ +LLS+ P I L V
Sbjct: 10 RHHTRPLRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSV 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A +K + + A S + A+ +LN +
Sbjct: 70 QLRHFIFANFMPATGDVIQRYIEQFVANSSK-MTAVGACGLIVTSLLLMYAIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + + +I +
Sbjct: 129 RSKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDFNSVIDDV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ ++ ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLILSWLSFWLLYSIVPTTRVLNRDAIIGAFVAAVLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y ++
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLRQ 280
>gi|17229562|ref|NP_486110.1| hypothetical protein all2070 [Nostoc sp. PCC 7120]
gi|17131161|dbj|BAB73769.1| all2070 [Nostoc sp. PCC 7120]
Length = 301
Score = 133 bits (335), Expect = 3e-29, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 118/278 (42%), Gaps = 6/278 (2%)
Query: 3 EYFCIV-FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFV 59
+F + + + E + S I+ +A+LS+FP I+ GF
Sbjct: 8 RFFRHLNWHTLKKTFTRTTERRLLGLGSEIAFNAMLSLFPAILAVLTAIGFFADSLQDTF 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + PE I + ++ GLF++S + A + +S V + ++
Sbjct: 68 RQLAAQLSQVAPEEAMVLIREFAGREIANSRNSGLFSLSFVIAIWTASGAVSTAMTAFDQ 127
Query: 119 AYRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+++ + R ++ ++L+S G + + LV+ SF+ L L V AL LL +
Sbjct: 128 IHQIPQEKMRPFWKSKLVSLGLTVGTILLLVLASFLVFISDLLLGMVVNENGALIFLLHL 187
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + + F++ + + I+PG I I W + + LF Y+ F
Sbjct: 188 WQLLRWPLALGIVATAFSFIYRYGTSVWKPGTPIMPGAIVAAIFWAILSALFRLYVANFG 247
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y+ +Y + +++ +++L+M ++G +LN ++
Sbjct: 248 NYNKVYGAVGTVIVLMLWLWMSAAVLLIGDQLNVTVGE 285
>gi|315178802|gb|ADT85716.1| ribonuclease BN [Vibrio furnissii NCTC 11218]
Length = 304
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 87/263 (33%), Gaps = 6/263 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ V + A +++ LLS+ P + ++ + V V+
Sbjct: 15 RYLLSRMVHDRVNVNAGYLAYITLLSLVPMLTVLLSILSSFSIFENVGDVVQDYVITHFV 74
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A L + + + + + + +LN +RV + R +
Sbjct: 75 PAAGDAVRHALSEFVTNTGKMTAVGGMFLFVAALTLISNIDKNLNYIWRVRKKRRMVFSF 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + L + + + I L +L F
Sbjct: 135 SMYWMILTLGPILVGASIALTSYITSL------KLLDSEALTGAFNFFLRRLPLLLSFFA 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++L +P K + + G + + + F YI F +Y +Y LA+I
Sbjct: 189 FAGLYLLVPNKKVHFLHAIAGAFVAALLFELSKKAFAAYITQFPSYQLIYGALAAIPILF 248
Query: 253 VFLYMLGVFFILGAELNASMIIY 275
V++Y+ + ++GAE+ A++
Sbjct: 249 VWVYLCWLIVLIGAEVTAALGER 271
>gi|163794700|ref|ZP_02188670.1| putative ribonuclease protein [alpha proteobacterium BAL199]
gi|159179973|gb|EDP64498.1| putative ribonuclease protein [alpha proteobacterium BAL199]
Length = 297
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 107/267 (40%), Gaps = 8/267 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
++D +A+ ++ LS+FP I L G + V ++ + P
Sbjct: 3 KRVTGQISKDDVPVVAAGVAFFGFLSIFPAIAAFVILYGLVADPGMVMPQLEPIRELVPA 62
Query: 73 VIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + ++ QV L + + A + S+ G AL +++ AY W
Sbjct: 63 EVFDLLAMQLKQVSGTTDTTLGLGLVFTLVLAIWSSAKGATALLSAMDIAYNETHRSGWI 122
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ + + L ++ + + + + A+ + ++ R +
Sbjct: 123 RPRITALAFTLAG----LVFAVLAIGLLAAVPAAVALLAFRDTVSNMLLGARWLLLAGVV 178
Query: 190 FIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ L ++ + P + ++ + I PG I + W+ + F Y+ TY+ + L ++
Sbjct: 179 LVALGLLYRYGPNRRSARTVWITPGSILATVLWLAASWGFGRYVANVGTYNETFGALGAV 238
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIY 275
+ L++LY+ +GAELNA + ++
Sbjct: 239 VVLLMWLYISAYIVCIGAELNAELELH 265
>gi|237748473|ref|ZP_04578953.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
OXCC13]
gi|229379835|gb|EEO29926.1| ribonuclease BN transmembrane protein [Oxalobacter formigenes
OXCC13]
Length = 439
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 46/265 (17%), Positives = 95/265 (35%), Gaps = 9/265 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
+ E + +A +IS + LLS+ P + + + + G P
Sbjct: 35 KRLAENNLTDVAGNISFTILLSIVPMLAIVLAIFTTFPEFGSLQNTLETYFSQGMIPAST 94
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A I + A A + I L + + + + N + V+ R ++
Sbjct: 95 AHIILSNLTTF-AANAANVSIIGGLTLVATALMTISLIESTFNHIWHVITPRPIVKRIMM 153
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
G + + L I ++ + LA + P L ++ + + I
Sbjct: 154 YIGIAIFGPLLLGISIYLTSHLVLAAHGLVANLPFLNSVSSSLISIFW------TAIAFT 207
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P G IF I++ + F +IV FSTY +Y LA+ +++
Sbjct: 208 LLYRVVPNRLVLWKDAASGGIFAGIAFEIAIRAFAFFIVNFSTYERIYGALAAFPIFMMW 267
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
+Y+ + +LG + A + +
Sbjct: 268 IYISCLIMLLGGMVAALLPEIRNGR 292
>gi|284990982|ref|YP_003409536.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284064227|gb|ADB75165.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 332
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 99/275 (36%), Gaps = 10/275 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
I+ H + + A+ ++ A+LS+ P +V ++ G + + + V
Sbjct: 36 WRRILRRVAGHVLSDRLMVQAAGVAFFAVLSIAPVLVTAISVYGAVNTPEQAVQQLSGVA 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYRVVE 124
G P + + D++ + A + L + A + ++ + L L AY E
Sbjct: 96 GMLPADLQSVVADQLTTITAASTQVLTWRGLTGLVVALWTATTAMTYLIDGLTLAYHETE 155
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + ++ +VL + I A A R G + ++ A
Sbjct: 156 TRGFLRRSGLALVFVLGG------ALLLGAVIAAAGAASRALAEVPGPVRTVLPVVSWAA 209
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + L ++ + P + ++ I G + W+ Y+ +Y + Y
Sbjct: 210 LAALVTVVLAVLYRYAPDRREARWRWITGGSAIATLLWLATTAGLFAYVERLGSYQSTYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
LA + + +L+ I+GA +NA R
Sbjct: 270 SLAGVAISMFWLWTTVFLVIVGAAVNAETERQTAR 304
>gi|148252707|ref|YP_001237292.1| ribonuclease BN-like family transmembrane protein [Bradyrhizobium
sp. BTAi1]
gi|146404880|gb|ABQ33386.1| putative ribonuclease BN-like family transmembrane protein
[Bradyrhizobium sp. BTAi1]
Length = 301
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 116/279 (41%), Positives = 169/279 (60%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +F ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGFLG+ +
Sbjct: 6 KALRYIFHVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFLGSKELADQA 65
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ WP +A +T EI VL TI A+ A YF+SNGVEALR++LNRAY V
Sbjct: 66 ATLMLETWPAQVADALTGEIHDVLTTTRTDALTIGAVLAVYFASNGVEALRVALNRAYGV 125
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGR 181
+E R WY RL S GY L+A+ T + MSF+ V PL LA R++ P + R
Sbjct: 126 IEQRRWYWLRLESIGYTLVAAFTALAMSFLIVLGPLVLATARRYLPLAVEANERFVNLSR 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ AL + L +H +LPA + M I+PG++FT+I+ +V ++F Y+ F+ Y T
Sbjct: 186 YGITISALIVALFILHAWLPAGRRSFMQIMPGIVFTFIASLVSGIVFGQYLARFANNYVT 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNAS+I +
Sbjct: 246 MYAGLASVIIALVFLYFIAAIFVYGGELNASIIKSRLPR 284
>gi|254413377|ref|ZP_05027148.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
gi|196179997|gb|EDX74990.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
Length = 355
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 104/280 (37%), Gaps = 11/280 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVI 63
F +V ++ + I+ + E+ +A+ ++ + S+ P ++ +AG G ++
Sbjct: 8 FKVVGELFKETIQEWQEDKASRLAAALAYYTVFSLAPLLIIAIAIAGSIFGPEAARGEIV 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + G AK I I + IS + + +S L+ +LN + V
Sbjct: 68 EQIQGLVGTEGAKVIETAIQNANRPNVSSIASIISIVVLLFGASGVFAQLQDALNTVWGV 127
Query: 123 VEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ RL+SF VL L++ V A+ Y L + +
Sbjct: 128 QPKPGRPVKGFLQKRLLSFSVVLGIGFLLLVSLIVSAALAALSNYAND---LLFGVGFLW 184
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ + + ++ FLP K + G T I + +G L Y+ +
Sbjct: 185 SLLNWVLSLGVITLLFAMMYKFLPDVKISWSDVWIGASITAILFTIGKSLIGMYLGR-GS 243
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ Y S++ L ++Y +GAE +
Sbjct: 244 FASTYGAAGSLVIFLAWVYYSAQILFIGAEFTQVYARKFG 283
>gi|149199775|ref|ZP_01876806.1| membrane protein-like protein [Lentisphaera araneosa HTCC2155]
gi|149137180|gb|EDM25602.1| membrane protein-like protein [Lentisphaera araneosa HTCC2155]
Length = 443
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 95/276 (34%), Gaps = 3/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ I + I F + + AS ++ +LS+ P + F + +G +
Sbjct: 28 QKVKIIALRSLKVLINDFNKNNLPLQASALTNITVLSMLPTLAFVFAFSKAMGLADMIKD 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ FG PE I + + K + + + + + + + + S N +
Sbjct: 88 QQEFFFGELPEQIRDILLQVFTLIDQANLKAVGLVGIAISMFTAISMMSKIEHSFNMIWG 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL--ALAYVRKFFPALGNLLLIIWN 179
+ + R + L+ + + Y+ +
Sbjct: 148 IKKNRDLMTKVKEYLFIFVTLPPILIATASANAFLSSNKVQEYLTTNLFLGEGIFEFYSL 207
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L + G F++ FLP K I W + ++ + + S+Y
Sbjct: 208 LVKIISPLIIAFGFTFLYRFLPNTKVNFRPAFIASFLVTIGWSLTQYIYVNLQIGVSSY- 266
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y A I LV+L++ + +LGA+L ++ +
Sbjct: 267 PLYGTFAVIPFFLVWLFIAWLIILLGAQLCFALQNH 302
>gi|300691298|ref|YP_003752293.1| tRNA-processing ribonuclease BN [Ralstonia solanacearum PSI07]
gi|299078358|emb|CBJ51008.1| tRNA-processing ribonuclease BN [Ralstonia solanacearum PSI07]
Length = 440
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 101/273 (36%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--D 64
+ ++ A+ E+ +A ++ + +LS+ P + L Q I
Sbjct: 15 KLRALLRYALRRAGEDSLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFQSFRAAIEGY 74
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P I++PI + Q + AKGL + S + + +LN +RV +
Sbjct: 75 LFSNLVPGNISRPILTYLNQF-SHNAKGLTAAGLVGLVVTSVMTMLMVENALNAIWRVRQ 133
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R L+ + V V + V + A P +
Sbjct: 134 RRPLAQRVLVFWALVSFGPVLIGASLSVSSYLVSISAGYVAKLPYG------LGVVVGVV 187
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L I +++F+P + +++ + F +Y+ F TY+ +Y
Sbjct: 188 PILLSAIAFAMLYVFVPNTLVAWRDAFLAGLVAAVAFEIAKRGFGYYVARFPTYTAVYGA 247
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ LV++Y+ + +LGA + A++ I
Sbjct: 248 FAALPIFLVWIYVSWLVTLLGATIAATLPIIRQ 280
>gi|237727990|ref|ZP_04558471.1| ribonuclease BN [Citrobacter sp. 30_2]
gi|226910247|gb|EEH96165.1| ribonuclease BN [Citrobacter sp. 30_2]
Length = 290
Score = 133 bits (334), Expect = 3e-29, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R + V + + E++ +A +++ +LLS+ P I L V
Sbjct: 10 RHHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSV 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFIPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDNALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ ++ ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLVLSWLSFWLLYSIVPTTRVPNRDAVIGAFVAAVLFETGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LA I V++Y +LGAE+ ++ Y K
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|269959427|ref|ZP_06173810.1| tRNA processing ribonuclease BN [Vibrio harveyi 1DA3]
gi|269835864|gb|EEZ89940.1| tRNA processing ribonuclease BN [Vibrio harveyi 1DA3]
Length = 314
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 90/266 (33%), Gaps = 8/266 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGA 69
++ + A +++ LLS+ P + ++ + V T+ +
Sbjct: 22 FFKYLLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFENVGETLQGYIIDN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + ++ + + + + + +LN +RV + R
Sbjct: 82 FVPASGDAVRTALQEFVSN-TGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRRPV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + + L + +L
Sbjct: 141 FSFSMYWMVLTLGPILVGASIAATSYVTSL------KLIENETLSGAYNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++ +P K + G + + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFMGLYFLVPNKKVYLSHGAVGAAIAAVLFELSKKGFAFYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + ++GAE+ A++
Sbjct: 255 ILFVWVYLCWLIVLIGAEVTAALGER 280
>gi|189463100|ref|ZP_03011885.1| hypothetical protein BACCOP_03803 [Bacteroides coprocola DSM 17136]
gi|189430079|gb|EDU99063.1| hypothetical protein BACCOP_03803 [Bacteroides coprocola DSM 17136]
Length = 442
Score = 133 bits (334), Expect = 4e-29, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 97/270 (35%), Gaps = 6/270 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R I+Y ++ F+ + AS ++ S LLS+ P + +A +
Sbjct: 35 RRQIYSCIKIVYLSVNQFLNDRIQIRASALTYSTLLSIIPILAILFAIARGFDFDALME- 93
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I + G + I+ + + I + + + + S N ++
Sbjct: 94 -IQLRKGVASQQSELIISWINSYLEHAQSGIFIGIGLIMLLWTVLILTDNIERSFNAIWQ 152
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS + F +LL + +VI S + + + + + F L I+
Sbjct: 153 VKHPRSVFRKITDYFSMILLLPLLIVISSGLTIFMTTYIKNMDNFL----VLAPILKFLV 208
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ I +++F+P K K+ I ++ + + + S Y+ +
Sbjct: 209 RLTPYALTWGMFIGLYIFIPNTKVKLKHAWFPGILAGTAFQAFQFFYVNSQIWVSNYNAI 268
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y A+I L++ + + GAE++
Sbjct: 269 YGSFAAIPMFLLWTQISWTICLFGAEMSYV 298
>gi|110677503|ref|YP_680510.1| ribonuclease BN, putative [Roseobacter denitrificans OCh 114]
gi|109453619|gb|ABG29824.1| ribonuclease BN, putative [Roseobacter denitrificans OCh 114]
Length = 306
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 114/268 (42%), Gaps = 9/268 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ A + +A+ ++ ++LS+FP + + + + V + + P
Sbjct: 14 LFAAFGLVGRSNLALIAAGVAFYSMLSIFPALAALIAVLSLIADPEVVVVQLAELQELMP 73
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E + + +I+ +++ + L + A + + GV A+ LN Y + R
Sbjct: 74 EDVYDILNAQIVGLVSTSSDTLGWTGLVSVIVALWSARAGVGAMMHGLNVVYAT-DSRGT 132
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L + + +I V P+ LA++ G +II R +
Sbjct: 133 WRHYLRAVLLTVSLVAIGIIALLALVVAPVILAFLA----LGGFTSVIIDLLRWGVGIAV 188
Query: 189 LFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F G+ ++ F P + I + PG +F +SW ++ F++Y+ F Y+ +Y + +
Sbjct: 189 IFAGIGLLYRFGPNRRPAITRFVTPGSVFAAVSWAALSIAFSYYVAHFGNYNEVYGSIGA 248
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
++ LV+L++ + GA LNA +
Sbjct: 249 VIAMLVWLWISSFLVLFGAALNAEIEAR 276
>gi|149276231|ref|ZP_01882375.1| hypothetical protein PBAL39_00887 [Pedobacter sp. BAL39]
gi|149232751|gb|EDM38126.1| hypothetical protein PBAL39_00887 [Pedobacter sp. BAL39]
Length = 329
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 126/275 (45%), Gaps = 2/275 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVV 66
++ + + ++ AS ++ + +L++FP I+F L F+ F +++ +
Sbjct: 34 LYTVGTFFFKEIGKDSLVNKASSLAYNFMLALFPAIIFLFTLIPFIPKQIGFQERLMEFI 93
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P K + +++ L + + +F++NGV L ++ N++ ++E R
Sbjct: 94 VLILPYDAYKAFETTLNEIVNKQNGRLLSFGFFLSLFFATNGVHNLMMAFNKSSLIIETR 153
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYAT 185
SW RLI+ + + ++++ + +AL Y+R GN + +I R
Sbjct: 154 SWVKQRLIAIVLTITIAFSVILCTVAMTLGEIALTYIRTGLHMKGNFIPYLIQLTRWSLL 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ F+ + ++ + PA K G I + F+ YI FS+Y+ +Y +
Sbjct: 214 GILYFVTISILYRYGPAHAKKWRFFSAGSWLATILAFLTVWGFSFYINNFSSYNKVYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++++ +++LY+ + ++G ELNAS+ + K
Sbjct: 274 SALIVLMIWLYLNSLILLVGFELNASVDLSKRSVK 308
>gi|256424888|ref|YP_003125541.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256039796|gb|ACU63340.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 323
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 2/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D+I ++ + A+ IS + LL++ PF +F L ++ T+ ++
Sbjct: 35 LYDVIKFFLKEMRNQSLGERAAAISFNFLLAIPPFFIFLFTLVPYIPMQNVEATLYELAE 94
Query: 68 GAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I D I L GL +++ + + SSN V + S N+ R
Sbjct: 95 DVTPNYNTYIIIRDMIHDFLYTHHNGLLSLAFIMGFFTSSNAVMGIARSFNKKLPGFRRR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYAT 185
W+ RL++ L+ + L++ + +A L Y+ + +L + R
Sbjct: 155 KWWQKRLMALKLTLILIILLLLTIILIIAQGTVLGYIFNYLGITDKRILSLADVARWILI 214
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L F L ++ F+PA K I G F I ++ +LF++++ F Y+ +Y +
Sbjct: 215 GLLFFSMLSVIYRFVPATVKKWKFITAGSTFAAILMILVTILFSYFVNNFGNYNKIYGSV 274
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+I+ ++ +Y ++G ELNAS+ I
Sbjct: 275 GTILILMLSVYFYSFILLIGFELNASIRILKE 306
>gi|89074479|ref|ZP_01160956.1| ribonuclease BN [Photobacterium sp. SKA34]
gi|89049767|gb|EAR55317.1| ribonuclease BN [Photobacterium sp. SKA34]
Length = 303
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 45/266 (16%), Positives = 91/266 (34%), Gaps = 6/266 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D I+ + A ++ LLS+ P I + + + +
Sbjct: 15 DYFSYLIQRVNHDRLTVTAGSMAYVTLLSLVPLITVVISALSAVPVFAGLGEQLQNFVIE 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + L A + + A + + ++ SLN +R+ + R W
Sbjct: 75 NFVPAAGAVVKTYLNEFVSNAGKMTAVGIAALFVVAMMLISSIDTSLNYIWRIKKKRRWI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I+ I + + L + L V + + + + +
Sbjct: 135 ISFSIYWMILTLGPILLGSSIAVSSYLGSLALLEHQALHG------FLQQSLRWFPSIMS 188
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++L +P K L G + I + + F Y+ F +Y +Y LA+I
Sbjct: 189 SLAFLLLYLLVPNCKVTFRHALIGSLSASILFELSKKGFAIYLAHFHSYQMIYGALAAIP 248
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ +LGAE+ AS+
Sbjct: 249 ILFVWIYLCWCIVLLGAEITASLGER 274
>gi|194289345|ref|YP_002005252.1| ribonuclease bn transmembrane protein [Cupriavidus taiwanensis LMG
19424]
gi|193223180|emb|CAQ69185.1| RIBONUCLEASE, putative RNase BN, TRANSMEMBRANE PROTEIN; besides
tRNAs maturation, its biological role is uncertain
[Cupriavidus taiwanensis LMG 19424]
Length = 448
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 96/274 (35%), Gaps = 7/274 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVI 63
V + A+ E+ +++ ++ + +L+V P + L F +
Sbjct: 15 LQKVRALARYALRRAAEDRLPQVSASLTFTTVLAVVPVLTVAFALLAAFPVFRDFRNAIE 74
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+F L + A A+GL + S + + +LN +RV
Sbjct: 75 AFLFQNLIPGNVSESIQRYLGMFAKSARGLTAMGLAGLMVTSVLTMLTVEDALNAIWRVK 134
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + + V + + + A P +
Sbjct: 135 QRRPLAQRVLVFWAVLTFGPVLIGASLSISSYLISISAGYVGTMPMG------LGLLVGA 188
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A +L + F++ +P A + + + +++ F ++I Y+ +Y
Sbjct: 189 APVLLSALAFAFLYTAVPNAYVEWRDAIVAGLVAAVAFEFAKRGFGYFITEIPAYTAVYG 248
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L+++Y+ + +LGA + A++ +
Sbjct: 249 TFAALPLFLLWIYLSWLVTLLGATIAANLPVIRQ 282
>gi|146313724|ref|YP_001178798.1| ribonuclease BN [Enterobacter sp. 638]
gi|166918689|sp|A4WGB7|Y4092_ENT38 RecName: Full=UPF0761 membrane protein Ent638_4092
gi|145320600|gb|ABP62747.1| tRNA-processing RNAse BN [Enterobacter sp. 638]
Length = 290
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 46/275 (16%), Positives = 99/275 (36%), Gaps = 10/275 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ + E++ +A +++ +LLS+ P + L V +
Sbjct: 14 RPFRAWVKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFAAFPMFSEVSVQLRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
VF + I I Q +A +K + + A + + A+ +LN +R +
Sbjct: 74 FVFANFMPATGDVIQRYIEQFVANSSK-MTAVGACGLIVTALLLMYAIDSALNTIWRSKK 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+R + + + + L + + + L +I N
Sbjct: 133 VRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASELNTVIDNVLRIF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ ++ ++ +P + + G + I + +G F YI TF +Y +Y
Sbjct: 185 PLILSWLAFWLLYSIVPTLRVPNRDAIVGALVAAILFELGKKGFALYITTFPSYQLIYGV 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA + V++Y +LGAE+ ++ Y K
Sbjct: 245 LAVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|126649530|ref|ZP_01721771.1| ribonuclease BN, putative [Bacillus sp. B14905]
gi|126593855|gb|EAZ87778.1| ribonuclease BN, putative [Bacillus sp. B14905]
Length = 305
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 62/272 (22%), Positives = 122/272 (44%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ D I + A+++ ++ LLS FP ++F L +L V +
Sbjct: 34 FVQDLIGRLKRVEISALSAQLAYFFLLSFFPLLIFLVTLLPYLNLETT--QVYSFLVNVL 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLKEILTNRNSSLLSIGVLGTIWSASKGINALIRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + + + + + V ++ + N R + +F
Sbjct: 151 DRGLSLVFTVALVIVIAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHNLRWSIPPILIF 210
Query: 191 IGLIFVHLFLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I L+ ++ F+P + KI+ + PG +F + W++ F+ YI F+ YS Y + +
Sbjct: 211 IVLMGIYWFVPNTSPRLKILGVWPGAMFATLGWLMVTYAFSFYINNFANYSATYGSIGGV 270
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++LY G+ I G LNA+M +K+
Sbjct: 271 IILMLWLYFTGIILIFGGVLNATMQKRALQKQ 302
>gi|39937810|ref|NP_950086.1| ribonuclease BN [Rhodopseudomonas palustris CGA009]
gi|192293593|ref|YP_001994198.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|39651670|emb|CAE30192.1| putative ribonuclease RNAse BN (RBN) transmembrane protein
[Rhodopseudomonas palustris CGA009]
gi|192287342|gb|ACF03723.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 297
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 106/279 (37%), Positives = 166/279 (59%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + DA+ F+ +DGWA+ASHI+LS L+++FPF++ +LAGF+G+ + +
Sbjct: 2 RQIRYAYAVAVDALYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFVGSRELADSA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ EI VL G+ TI + A YF+SNGVE+LR+ LNRAY V
Sbjct: 62 AELLLDVWPAQVASTLSGEIHDVLTTTRGGVLTIGLVLALYFASNGVESLRVGLNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWNGR 181
+E R WY+ RL S GY L+A+ T + M F+ V PL +A R + P L + ++ R
Sbjct: 122 IEPRPWYLLRLESIGYTLVAAFTALAMGFLIVLGPLIVATARHYVPLLVHDNEPLLTFAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
+ AL + L +H +LPA + ILPG++FT + ++ + F Y+ F+ Y +
Sbjct: 182 YGIAITALTVALFLLHAYLPAGRRSFRQILPGIVFTITASLISGMTFGMYLARFANNYVS 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I +
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPE 280
>gi|260771961|ref|ZP_05880878.1| ribonuclease BN [Vibrio metschnikovii CIP 69.14]
gi|260612828|gb|EEX38030.1| ribonuclease BN [Vibrio metschnikovii CIP 69.14]
Length = 307
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 38/276 (13%), Positives = 87/276 (31%), Gaps = 6/276 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + + A +++ LLS+ P + ++ V +I
Sbjct: 7 FKQSVRFVRYLFNRMNHDRININAGYLAYITLLSLVPMLTVLLSILSSFAIFDNVGEIIQ 66
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
A L + + + + + ++N +RV
Sbjct: 67 EFVITHFVPAAGDAVSNALLQFVANTGKMTAVGGAFLFIAALMLISNIDKNMNFIWRVRN 126
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + + + L + + V + +
Sbjct: 127 KRRVVFSFSMYWMILTLGPILVGTSIAVTSYVTSL------KLVESEAFSGVFRLFLSRL 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L F + +++ +P K +++ L G + + + F YI F +Y +Y
Sbjct: 181 PFLLSFFAFVGLYVLVPNKKVRLVHALSGAFVAALLFELSKKAFAAYITQFPSYQLIYGA 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA+I V++Y+ + ++GAE A++ K+
Sbjct: 241 LAAIPILFVWVYLCWLIVLIGAEFTAALGESEQWKR 276
>gi|156972915|ref|YP_001443822.1| ribonuclease BN [Vibrio harveyi ATCC BAA-1116]
gi|166199588|sp|A7MTU7|Y593_VIBHB RecName: Full=UPF0761 membrane protein VIBHAR_00593
gi|156524509|gb|ABU69595.1| hypothetical protein VIBHAR_00593 [Vibrio harveyi ATCC BAA-1116]
Length = 314
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 35/266 (13%), Positives = 91/266 (34%), Gaps = 8/266 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGA 69
++ + A +++ LLS+ P + ++ + V T+ +
Sbjct: 22 FFQYLLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFENVGETLQGYIIDN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + ++ + + + + + +LN +RV + R
Sbjct: 82 FVPASGDAVRTALQEFVSN-TGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRRPV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + V + L + +L
Sbjct: 141 FSFSMYWMVLTLGPILVGASIAVTSYVTSL------KLIENETLTGAYNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++ +P K + G + + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFMGLYFLVPNKKVYLSHGAIGAAIAAVLFELSKKGFAFYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + ++GAE+ A++
Sbjct: 255 ILFVWVYLCWLIVLIGAEVTAALGER 280
>gi|187929074|ref|YP_001899561.1| ribonuclease BN [Ralstonia pickettii 12J]
gi|187725964|gb|ACD27129.1| ribonuclease BN [Ralstonia pickettii 12J]
Length = 443
Score = 132 bits (333), Expect = 4e-29, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 92/272 (33%), Gaps = 7/272 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDV 65
+ + A+ E+ +A ++ + +LS+ P + L F +
Sbjct: 15 KLRALARYALRRAGEDHLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFKSFRADIEGY 74
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+F L + AKGL + S + + +LN +RV
Sbjct: 75 MFSNLVPGSISRPILTYLNQFSTNAKGLTAAGLIGLVVTSVMTLLTVENALNAIWRVRHR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R L+ + + A V + V + A P +
Sbjct: 135 RPLAHRVLVFWALMTFAPVLIGASLSVSSYLVSISAGYVHKLPFG------LGVIVSLVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + + ++ + +F Y+ TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTNVERRDAFIAGLIAAGAFEIAKRVFGAYVAHIPTYTAVYGAF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L ++Y+ + +LGA + +++ I
Sbjct: 249 ATLPIFLTWIYVSWLVTLLGATIASTLPIIRQ 280
>gi|254418863|ref|ZP_05032587.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
gi|196185040|gb|EDX80016.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
Length = 434
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 56/270 (20%), Positives = 113/270 (41%), Gaps = 10/270 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI++ + + +A ++ LLS+FP + L G + + ++G
Sbjct: 108 DILWRTGASYFGDRVGFVAGGVTFFTLLSLFPLLGTFVTLYGLFADPADAWSRLQFLYGV 167
Query: 70 WPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P IA + E+ ++ A L + + + ++ V+ L LN AY VE R
Sbjct: 168 MPSSIAAFLGGEMERLAANSNGQLTFTLIWTLALSLWTANGAVKVLFYGLNIAYHEVERR 227
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L+ G+ L A + + +F ++ + V L ++ R +
Sbjct: 228 NIVRYNLLCMGFTLGA-----VAAVLFSSLLVVGVPVVVGLFGLQEEWGLLALLRWPLLL 282
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L ++ F P K++ + PG IF + + + +F+ Y+ F + Y L
Sbjct: 283 VGYVAALTLIYRFGPCRQKARWRWLTPGAIFAAVVSLTVSFVFSWYLTNFVRTDS-YGPL 341
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
A++M L++ ++ ++GAELNA +
Sbjct: 342 AAMMGFLLWTWLSVQVILMGAELNAEIEHQ 371
>gi|319763673|ref|YP_004127610.1| ribonuclease bn [Alicycliphilus denitrificans BC]
gi|330824062|ref|YP_004387365.1| ribonuclease BN [Alicycliphilus denitrificans K601]
gi|317118234|gb|ADV00723.1| ribonuclease BN [Alicycliphilus denitrificans BC]
gi|329309434|gb|AEB83849.1| ribonuclease BN [Alicycliphilus denitrificans K601]
Length = 417
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 98/258 (37%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
E F E+ AS ++ + LL++ PF + + V+ +V P+ I
Sbjct: 32 ERFREDRLGLTASSLTFTTLLALVPFFTVALAVFSAFPIFGQMQQVLQRWLVDSLVPDSI 91
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++P+ + Q + A GL + + + +LN +RV +R LI
Sbjct: 92 SRPVLGYLTQF-SAKASGLGMAGFSVLMVTALALILTIDRTLNTIWRVRRLRPLGQRVLI 150
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + ++ A + L L L G+
Sbjct: 151 YWAAITLGPLVLAASLALTTSMASAASR-----GLGATLPGGTRLLLDSIEFLVLAAGVA 205
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + + Y+ + TYS +Y A++ L++
Sbjct: 206 AMYRYVPNTQVHWRYAWAGGLFVSVGMELAKKGLALYLASVPTYSVLYGTFATLPILLLW 265
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 266 IYVAWVIVLLGAVVAAYL 283
>gi|224024116|ref|ZP_03642482.1| hypothetical protein BACCOPRO_00837 [Bacteroides coprophilus DSM
18228]
gi|224017338|gb|EEF75350.1| hypothetical protein BACCOPRO_00837 [Bacteroides coprophilus DSM
18228]
Length = 439
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 97/271 (35%), Gaps = 6/271 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ I+ +++ F+ + AS ++ S LLS+ P + +A G +
Sbjct: 28 LQRRLYSCIKIVILSVQQFLNDRIQVRASALTYSTLLSIIPILAILFAIARGFGFDAVIE 87
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
G E I+ + + + + + + + +S N +
Sbjct: 88 AQFRH--GMAKEQAELVISWINSYLQHAQSGVFIGVGLIMLLWTILILTDNIELSFNAIW 145
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+V R+ + F +LL + +VI S + + + + + F L ++
Sbjct: 146 QVKHPRTVFRKITDYFSMILLLPLLIVISSGLTIFMTTYIKDMENFL----VLAPVLKFL 201
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ I + +F+P K ++ I ++ + + + S Y+
Sbjct: 202 VRMIPYALTWGMFIGLFIFIPNTKVRLQHAWLPGILAGSAFQAFQYFYINSQIWVSNYNA 261
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A+I L++ + + GAE++
Sbjct: 262 IYGSFAAIPMFLLWTQISWTICLFGAEMSYV 292
>gi|283834641|ref|ZP_06354382.1| hypothetical protein CIT292_08846 [Citrobacter youngae ATCC 29220]
gi|291069554|gb|EFE07663.1| tRNA-processing ribonuclease BN (RNase BN) [Citrobacter youngae
ATCC 29220]
Length = 290
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R + V + + E++ +A +++ +LLS+ P I L V
Sbjct: 10 RHHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + A+ +LN +
Sbjct: 70 QLRHFIFANFIPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDNALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNI 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ ++ ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLVLSWLSFWLLYSIVPTTRVPNRDAVIGAFVAAVLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LA I V++Y +LGAE+ ++ Y K
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|88706605|ref|ZP_01104308.1| tRNA processing ribonuclease BN [Congregibacter litoralis KT71]
gi|88699101|gb|EAQ96217.1| tRNA processing ribonuclease BN [Congregibacter litoralis KT71]
Length = 441
Score = 132 bits (333), Expect = 5e-29, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 104/281 (37%), Gaps = 9/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + +Y A + + ++ ++ +L ++ P + +A + A Q +
Sbjct: 40 MNKLPKLQRRALYLA-SRYKSDRCRDTSAALTYMSLFALVPLMTVLYTMASAVPAFQGLE 98
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ ++F + I + + + AK L + + + + N
Sbjct: 99 SNIQSLLFDNLVPETSAGIEEYLSDF-SRQAKNLTGFGIAFLIVTAVLMLRNIEQAFNLI 157
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R + R + L+ + + LA VT+ + V + + ++ +++ I
Sbjct: 158 WRTRDNRGTVSSFLLYWAILSLAPVTIGLGLGVSTFLTSFAGRLEEW-----DIIGIGGL 212
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+G ++ +P + + G + S+ + LFT + S+ +
Sbjct: 213 LLRMLPYFLQILGFTLIYAAVPNCRVPVKHAFVGGVIAATSFNIARALFTKLVAG-SSIT 271
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++Y+ ++ A + S+ Y +
Sbjct: 272 FIYGAFAAVPLFLLWIYISWNIVLIAAIVVHSLSAYQSEAQ 312
>gi|302558422|ref|ZP_07310764.1| YihY family protein [Streptomyces griseoflavus Tu4000]
gi|302476040|gb|EFL39133.1| YihY family protein [Streptomyces griseoflavus Tu4000]
Length = 294
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 97/267 (36%), Gaps = 3/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ +D A+ ++ A+L++FP ++ +L G V +I +
Sbjct: 27 RALRRTPVSLWTDDVTDWAAALTYYAMLAIFPALLVTLSLVGL-RDPDDVQNLIREIGAL 85
Query: 70 WPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + + + + L + ++A + +S+ + R +L YR+ + R
Sbjct: 86 VPPDSRDIIEETLRSMARRRSAARLLLVLGTVSALWSASSYLAVFRRALYSMYRIKDQRP 145
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ T + L I + + A + + R +L
Sbjct: 146 VWRTAPRIVATAVALLTLLAISALALTVTEGLARAAGRLAGAGDAAVAVGLAFRWPVLLL 205
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ + P + + + PG + W+ +V Y+ Y +Y LA
Sbjct: 206 VATVLVMLLFRAGPESTRGVRRMAPGGLLAVFLWLGASVGLYLYMAQVGAYDRLYGSLAG 265
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
++ L++L+ + + GA+ NA +
Sbjct: 266 LIVFLMWLWFSNLALLAGAQFNAELAR 292
>gi|300087710|ref|YP_003758232.1| ribonuclease BN [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527443|gb|ADJ25911.1| ribonuclease BN [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 295
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 107/268 (39%), Gaps = 7/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+I IE +D +A+ ++ A+LS+FP ++ ++AG + V I
Sbjct: 24 RVIVGTIEALGRDDASHLAAGVAYFAVLSLFPLLLGFISIAGLFLPSEAVQQAIFDFMET 83
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ ++ I + I ++ + IS LA + SSN A+ ++LNR+ V E +Y
Sbjct: 84 NLPIASEIIVENIDSII-ASRGVIGIISLLALFWTSSNMFTAIAVALNRSCGVCERHPFY 142
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I + L A + + I L L +
Sbjct: 143 IRKPRDMALSLAAGFLFLFSGVLPTVISLIPEA------HLPLVGSTTNVILFLIGAGLS 196
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ + ++ FLP + I PG + +++ F ++ F+ + +Y + S +
Sbjct: 197 FLVFLVLYSFLPTHRRPWQFIWPGALLGTVAFEGLRYFFIMFLSNFANFKLVYGTIGSAV 256
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
++++Y+ ++GAE N + +
Sbjct: 257 ALMIWIYLSAFILLIGAEFNGQLKRLHE 284
>gi|94264035|ref|ZP_01287835.1| Ribonuclease BN [delta proteobacterium MLMS-1]
gi|94266379|ref|ZP_01290078.1| Ribonuclease BN [delta proteobacterium MLMS-1]
gi|93453031|gb|EAT03519.1| Ribonuclease BN [delta proteobacterium MLMS-1]
gi|93455546|gb|EAT05733.1| Ribonuclease BN [delta proteobacterium MLMS-1]
Length = 484
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 41/314 (13%), Positives = 96/314 (30%), Gaps = 41/314 (13%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + ++ + F + AS ++ + +LS+ P + G + LGA +
Sbjct: 38 QRASRELLRVLQIFVREFNRDRIPLRASALTFTIILSLVPTLALGTAVLKGLGADDQMRQ 97
Query: 62 VIDVVFGAWPEVIA---------------------------------------KPITDEI 82
A + +
Sbjct: 98 AAHRFIEQMEATGALLDEHLPQRQEAAPEEGPAPPAAAPDETEDPADITAHLGQAVDQIF 157
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
V L + + ++ S+N + R + ++L
Sbjct: 158 DYVDRTDFATLGAFGIIGLVVAVVVVLGSIERSMNAIWHTTLSRPMGRRVMDYLALMILL 217
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + + L +R + I + L + ++ FLP
Sbjct: 218 PL--AVNLTLATEATLKSENLRDRLQLPLPIGGIQEFILGLMPLALLTLTFTILYRFLPN 275
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
K K+ L G F ++W++ L+ + + Y+ +Y A++ LV+L + + F
Sbjct: 276 TKVKLTPALIGGFFGAVAWLLFQALYLNLQFGVARYNAIYGSFATLPLFLVWLQLCWIVF 335
Query: 263 ILGAELNASMIIYY 276
+ GAE++ ++ +
Sbjct: 336 LSGAEMSFAVQARH 349
>gi|13476680|ref|NP_108249.1| hypothetical protein mll8068 [Mesorhizobium loti MAFF303099]
gi|14027441|dbj|BAB53710.1| mll8068 [Mesorhizobium loti MAFF303099]
Length = 353
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 118/270 (43%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DI + +E F ++ +A+ + LL++FP + ++ GF+ V + + G
Sbjct: 59 DIFWRLLEEFNKDRVLLVAAGATFYLLLALFPALAAFISIYGFVADPVTVADHVAYLGGL 118
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P I ++ + L I A + S++G++AL ++N AY E R
Sbjct: 119 LPSGGLDLIRGQLQALAMQKPGALGIGFFIGLGIALWSSNSGMKALFDAMNIAYEEREKR 178
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ L+S + + A + +++ +P L Y ++ R +
Sbjct: 179 SFITLNLMSILFTVGALLIGIVLLLTVGVVPALLRYFY----LDAWTETLVAVSRWPILV 234
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A+ G+ ++ F P+ ++K + G + +W+ + LF+ Y+ F+ Y+ Y L
Sbjct: 235 AAMLTGISLLYRFGPSRERAKWRWLSSGALIATAAWIAASWLFSFYLQHFANYNATYGSL 294
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+++ +++ ++ + I GA +NA M
Sbjct: 295 GAVVGLMMWTWISVIILIAGAAINAEMEHQ 324
>gi|108804245|ref|YP_644182.1| ribonuclease BN [Rubrobacter xylanophilus DSM 9941]
gi|108765488|gb|ABG04370.1| ribonuclease BN, putative [Rubrobacter xylanophilus DSM 9941]
Length = 317
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 55/270 (20%), Positives = 113/270 (41%), Gaps = 4/270 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D++ + E+ A A +++ ++FPF +L G A V T+++ +
Sbjct: 29 LVDLLKLTLREMQEDHVSAYAGNLTYKVFFAIFPFFTLLLSLLGLFDATDLVRTMLENLS 88
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTIS----ALAAAYFSSNGVEALRISLNRAYRVV 123
P+ + + ++L + A+G FT L A + S + ++ ++N Y V
Sbjct: 89 RVMPQSALRFVESQLLSITQSQAEGAFTAGAVISILLALWGVSGAMRSVMEAMNVMYEVE 148
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R ++ IS L + L++ + V + I +
Sbjct: 149 ENRPFWKVYGISILISLAVAALLILALLLLVFGAAFGGGLASLVGLGPVFAAIWSVAQWP 208
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ V+ F PA + + I G + ++ W++ ++ F+ Y+ F +Y+ Y
Sbjct: 209 ILACFVLFAFALVYYFAPAVEQRWRWISAGSVLAFVFWLIFSLAFSLYVANFGSYNATYG 268
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
LA I+ L+++Y + +LGAELN +
Sbjct: 269 SLAGIIIFLLYVYYSSLIVLLGAELNQVIE 298
>gi|256847880|ref|ZP_05553325.1| ribonuclease BN [Lactobacillus coleohominis 101-4-CHN]
gi|256715569|gb|EEU30545.1| ribonuclease BN [Lactobacillus coleohominis 101-4-CHN]
Length = 296
Score = 132 bits (332), Expect = 5e-29, Method: Composition-based stats.
Identities = 65/279 (23%), Positives = 130/279 (46%), Gaps = 2/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M E + + HF A A+ ++ +LLS+FP I+ NL +G
Sbjct: 1 MEERRGKIKQFLAVFFHHFQMAQVSASAAVLAYYSLLSIFPAILVVGNLLPMIGIDA--N 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A PE + I + L + G+ T A+ A + +S G+ A + S+N AY
Sbjct: 59 TVLGYLQTAVPESVFAFIKPIVYDFLRHGSGGILTTGAVIALWSTSQGIAAFQRSVNHAY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E ++ I R +SF ++L+ + L +M+ + L ++ F + +
Sbjct: 119 GVAENQNPIINRTVSFIWMLVVILILFLMALTYGIGEDLLQSLQPIFRFNTSYIKTFAQL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T +LFI L ++ F+P A+ ++ ++ G + + W+ + +F+ Y S T
Sbjct: 179 KWPVTFFSLFIALTLLYYFVPNARVRLRYVVVGAVIVALLWMGLSRVFSMYAQLLSRRVT 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + +++L G+ ++GA +NA++ + +
Sbjct: 239 SYKTIGAFIAMMIWLDFSGMLVMIGATINATLQEEHEGE 277
>gi|255591092|ref|XP_002535436.1| conserved hypothetical protein [Ricinus communis]
gi|223523109|gb|EEF26946.1| conserved hypothetical protein [Ricinus communis]
Length = 747
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 41/236 (17%), Positives = 90/236 (38%), Gaps = 11/236 (4%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
M + ++ L S+ P +V +AG+ G + + G A+ I +
Sbjct: 1 MGAALAFYTLFSLAPILVLVLAIAGWFYGPQAAQGELFAQLRGLVGAQGAEAIQAVLAGA 60
Query: 86 LAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVE-----MRSWYITRLISFGYV 139
L ++ + ++ L+ SL+ ++V + TRL+SFG V
Sbjct: 61 RNKEEGRLATIVAGALLLFGATTVFAELKASLDAIWQVPPLTKGTVWDTIRTRLLSFGMV 120
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
L+ + L++ V A+ L + ++ + +++ + + + + +
Sbjct: 121 LVLAFLLMVSLVVSAALTLLEKFWGSYW---TDAGIVLTVINMVISFVVIAALFGVIFKM 177
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
LP K + G + T + +G YI S ++ Y S++ L++L
Sbjct: 178 LPRVKLSWHDVTIGAVGTAALFTIGKYAIGAYIGN-SGVASSYGAAGSMIALLLWL 232
>gi|261250579|ref|ZP_05943154.1| ribonuclease BN [Vibrio orientalis CIP 102891]
gi|260939148|gb|EEX95135.1| ribonuclease BN [Vibrio orientalis CIP 102891]
Length = 305
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 91/264 (34%), Gaps = 8/264 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAWP 71
+ + A +++ LLS+ P + ++ + + D V +
Sbjct: 15 RYLLSRMGHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFAIFENAGDAIQDFVITHFV 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +L+ ++ + + + + + +LN +RV + R +
Sbjct: 75 PAAGDAVKGALLEFVSN-TGKMSAVGGGFLFVAALMLISNIDKNLNYIWRVQQKRRAVFS 133
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + + L
Sbjct: 134 FSMYWMVLTLGPILVGASIAATSYVTSL------KIIESEAVSGVYNLLLRWLPFLLSLF 187
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P K +I L G I + + F YI F +Y +Y LA+I
Sbjct: 188 AFVGLYLLVPNKKVRISHALIGAIVAALLFEASKKGFAAYITQFPSYQLIYGALAAIPIL 247
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + ++GAE+ A++
Sbjct: 248 FVWVYLCWLIVLVGAEVTAALGER 271
>gi|260911943|ref|ZP_05918508.1| YihY family protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260633966|gb|EEX52091.1| YihY family protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 440
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 100/264 (37%), Gaps = 4/264 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + ++ F +AS ++ S +L++ P + +A G +++
Sbjct: 34 VLKRLVVTVKFFTTRSVTDLASALTYSTVLAIVPIVAVVFAIARGFGFSKYIEVWFRDAL 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ P+ I ++ I + + + + + N ++V RS
Sbjct: 94 SSQPQAAETIIGFVNSYLVHTKGGVFLGIGLIFMLFTVLMLISNIEKAFNSIWQVQHPRS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ T L + +V+ S V + + + ++ + L+I +
Sbjct: 154 LFRTITDYLAMFFLVPIVIVVTSGVSIVMATFAQDINEYVVLGPMMRLVIT----VMPYV 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + +F+P K K + I + I+ + V + H + S+Y+ +Y A+
Sbjct: 210 LMSAVFVCLFIFMPNTKVKFSAAFFPGILSGIAMQILQVFYIHSQIFLSSYNAIYGSFAA 269
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ ++++ + + GAEL+ +
Sbjct: 270 LPLFMLWVQISWTICLFGAELSYT 293
>gi|241663259|ref|YP_002981619.1| ribonuclease BN [Ralstonia pickettii 12D]
gi|309782509|ref|ZP_07677233.1| tRNA-processing ribonuclease BN [Ralstonia sp. 5_7_47FAA]
gi|240865286|gb|ACS62947.1| ribonuclease BN [Ralstonia pickettii 12D]
gi|308918846|gb|EFP64519.1| tRNA-processing ribonuclease BN [Ralstonia sp. 5_7_47FAA]
Length = 443
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 42/272 (15%), Positives = 92/272 (33%), Gaps = 7/272 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDV 65
+ + A+ E+ +A ++ + +LS+ P + L F +
Sbjct: 15 KLRALARYALRRAGEDHLPQVAGSLTFTTVLSLVPILTVAFALFTAFPMFKSFRADIEGY 74
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+F L + AKGL + S + + +LN +RV
Sbjct: 75 MFSNLVPGSISRPILTYLNQFSSNAKGLTAAGLIGLVVTSVMTLLTVENALNAIWRVRHR 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R L+ + + A V + V + A P +
Sbjct: 135 RPLAQRVLVFWALMTFAPVLIGASLSVSSYLVSISAGYVHKLPFG------LGVIVSLVP 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L I +++F+P + + ++ + +F Y+ TY+ +Y
Sbjct: 189 ILLSAIAFAMLYVFVPNTNVQRRDAFIAGLIAAGAFEIAKRVFGAYVAHIPTYTAVYGAF 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A++ L ++Y+ + +LGA + +++ I
Sbjct: 249 ATLPIFLTWIYVSWLVTLLGATIASTLPIIRQ 280
>gi|149908553|ref|ZP_01897215.1| ribonuclease BN [Moritella sp. PE36]
gi|149808387|gb|EDM68324.1| ribonuclease BN [Moritella sp. PE36]
Length = 300
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 100/272 (36%), Gaps = 6/272 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ F + + ++ AS ++ + LLS+ P I ++ + +
Sbjct: 23 FLLTCFAFLRYLGKRISDDRLTVNASSLAYTTLLSLVPLITVLFSVMSAFPIFETWQQSV 82
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ A E L + +I + A + + + +N +R
Sbjct: 83 ESFLYTNLVPHATGTIQEYLHDFVANTGKMTSIGSGALFIVALLLINTIDKHINHIWRCK 142
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
RS++++ + + + + + I V + F + +
Sbjct: 143 IERSFFLSFAVYWLILTFGPLFIAISLGVSSYLLSLS------FVTDMTDVTGTVSLLKL 196
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L +GL +++ +P + + G F+ + FT Y+V F +Y +Y
Sbjct: 197 VPALLGTLGLFVMYVVIPHRRVPLRYAFIGACFSAFLFESIKRAFTWYLVQFPSYEVIYG 256
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA+I LV++Y+ + +LGAE+ AS+ +
Sbjct: 257 ALATIPILLVWIYLCWLIVLLGAEITASLTEF 288
>gi|313675805|ref|YP_004053801.1| ribonuclease bn [Marivirga tractuosa DSM 4126]
gi|312942503|gb|ADR21693.1| ribonuclease BN [Marivirga tractuosa DSM 4126]
Length = 311
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 57/281 (20%), Positives = 123/281 (43%), Gaps = 1/281 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F + I+ + + A++++ L++FP I+F L +L
Sbjct: 27 LKRSGVSYFTLFKIFIQELSDHNLIERANNVAFQFTLAIFPTIIFLFTLIPYLPIDNLQQ 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ ++ P + + I+ +L+ L ++ + A YF++NG AL + N+ Y
Sbjct: 87 EVMSLLEETMPGSVYEVAQSTIVDILSKSRGDLLSVGFIFALYFATNGTSALMTAFNQTY 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + R + + I+ G L + LV + + + ++ F + + I+ G
Sbjct: 147 RTKDSRGFVKAKAIAIGLTFLLAFVLVTSIVLLIVAQQVIYFLEDFGIISDSFEVYIFIG 206
Query: 181 RIYATMLALF-IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + LF I + ++ + PA + PG I + + F+ YI F TY+
Sbjct: 207 LRFLVIFFLFQIAISVIYYWAPAIHKRWHFFNPGSILATFLCLAVSFGFSFYINNFGTYN 266
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y + +++ +++ L +F I+G +LN S+ + K
Sbjct: 267 KLYGSIGALIAIMIWFSFLSLFLIVGLQLNVSLEKARIKNK 307
>gi|256112306|ref|ZP_05453227.1| Ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
gi|265993739|ref|ZP_06106296.1| ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
gi|262764720|gb|EEZ10641.1| ribonuclease BN [Brucella melitensis bv. 3 str. Ether]
Length = 286
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 182/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLELFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|92114018|ref|YP_573946.1| ribonuclease BN, putative [Chromohalobacter salexigens DSM 3043]
gi|122419877|sp|Q1QWB1|Y1895_CHRSD RecName: Full=UPF0761 membrane protein Csal_1895
gi|91797108|gb|ABE59247.1| tRNA-processing RNAse BN [Chromohalobacter salexigens DSM 3043]
Length = 410
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 105/279 (37%), Gaps = 7/279 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
R + I+ + + I+ F DG AS ++ + L +V PF+ + + + Q +
Sbjct: 9 RRWLTIILRSLRELIQRFDAHDGLKTASALTYTTLFAVVPFMTVLYAMLSAIPSFQGISE 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++F + + + + + A+ L I + + + + + N +
Sbjct: 69 QLQALIFSQFVPATGSALVEHLRDF-SRQARSLTLIGLMFLLVTAVMMMVTVERAFNNIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + L+ + + L + L + + G + +
Sbjct: 128 HVSRSRRGVSSFLLYWAVLTLGPLLLGSGFLLSSYLASLTLVRGAAEVLGGPVAFL---- 183
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ F +F+++ +P + + + G ++ + F+ Y+ F +Y
Sbjct: 184 -RLLPLTLSFTAFVFIYMAVPNCRVRFRHAVAGAGLAALALELAKGAFSLYVTYFPSYQV 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y A++ LV++++ ++GAEL A + +
Sbjct: 243 IYGTFAAVPLFLVWVFLSWAIVLVGAELAAWLGERRRAE 281
>gi|121593612|ref|YP_985508.1| putative ribonuclease BN [Acidovorax sp. JS42]
gi|120605692|gb|ABM41432.1| tRNA-processing RNAse BN [Acidovorax sp. JS42]
Length = 429
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 49/258 (18%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
E F E+ AS ++ + LLS+ PF+ + + V+ +V P+ I
Sbjct: 33 ERFREDRLGLTASSLTFTTLLSLVPFVTVALAMFTVFPMFAEMQLVLQRWLVDSLVPDSI 92
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++P+ + Q A A GL + + + +LN +RV +R LI
Sbjct: 93 SRPVLGYLTQF-AAKAHGLGAAGLSILMVTALALILTIDRTLNNIWRVQRLRPLGQRVLI 151
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + ++ A + L L G+
Sbjct: 152 YWAALTLGPLVLAASLALTTSVASAASR-----GIGDTLPGGARLLFDAIEFFVLAAGMA 206
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + + + + Y+ + TYS +Y A++ L++
Sbjct: 207 ALYRYVPNTQVHWRHAWAGGVFVAVGIELAKKVLSLYLASVPTYSVLYGTFATLPILLLW 266
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 267 VYVAWVIVLLGAVVAAYL 284
>gi|188581440|ref|YP_001924885.1| ribonuclease BN [Methylobacterium populi BJ001]
gi|179344938|gb|ACB80350.1| ribonuclease BN [Methylobacterium populi BJ001]
Length = 317
Score = 132 bits (332), Expect = 6e-29, Method: Composition-based stats.
Identities = 105/277 (37%), Positives = 159/277 (57%), Gaps = 1/277 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ D++ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G
Sbjct: 21 RLRKILDVMGLAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGTKSLADEAG 80
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 81 TLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIR 140
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
EMR W++TRL S GYV+ + ++ + + V PL + P L L L + GRI
Sbjct: 141 EMRPWWLTRLESIGYVVCGAFAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRIG 200
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T + + L+ H F+ A + ++S+LPG+ T W + + F +Y+ FS Y++ Y
Sbjct: 201 VTAFLIALVLVIAHKFVAAGRRPVLSVLPGIAVTLGLWFLAGLGFGYYLDRFSNAYASTY 260
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 261 GGLATAMIFLVFLYWLAAMFLFGGEVNGTVIAARRQR 297
>gi|255531742|ref|YP_003092114.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
gi|255344726|gb|ACU04052.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
Length = 330
Score = 132 bits (331), Expect = 6e-29, Method: Composition-based stats.
Identities = 55/275 (20%), Positives = 127/275 (46%), Gaps = 2/275 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV 66
++ + + ++ AS ++ + +L++FP I+F L F+ F ++ ++
Sbjct: 34 LYTVASFFFKEIGKDSLVNKASSLAYNFMLAIFPAIIFLFTLIPFIPKRFHFQDQLMQLI 93
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + +++ +GL + L + +F++NGV L ++ N++ ++E R
Sbjct: 94 MLILPADAYNAFSATLDEIVHKQNRGLLSFGFLLSLFFATNGVHNLMMAFNKSSLIIETR 153
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYAT 185
+W RLI+ L ++++++ AL Y+ G+ ++ +I R
Sbjct: 154 TWLKQRLIAIVLTLTIALSVIVCIIAMAIGEYALNYIDTGLDIKGDFIVYLIKLTRWSLL 213
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ F+ + ++ + PA K G I + F+ YI FS+Y+ +Y +
Sbjct: 214 GILYFVTISILYRYGPAHAKKWRFFSAGSWLATILAFLTIWGFSFYINNFSSYNKIYGSI 273
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ +++LY+ + ++G ELNAS+ + K
Sbjct: 274 GTLIVIMIWLYLNSLILLIGFELNASVDLSKRSVK 308
>gi|75909322|ref|YP_323618.1| ribonuclease BN [Anabaena variabilis ATCC 29413]
gi|75703047|gb|ABA22723.1| Ribonuclease BN [Anabaena variabilis ATCC 29413]
Length = 321
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 57/283 (20%), Positives = 119/283 (42%), Gaps = 6/283 (2%)
Query: 3 EYFCIV-FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFV 59
+F + + + E + S I+ +A+LS+FP I+ GF
Sbjct: 29 RFFRHLNWRTLKKTFTRTTERRLLGLGSEIAFNAMLSLFPAILAVLTAIGFFADSLQDTF 88
Query: 60 PTVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + PE I + ++ GLF++S + A + +S V + ++
Sbjct: 89 RQLAAQLSQVAPEEAMVLIREFAGREIANSRNSGLFSLSFVIAIWTASGAVSTAMTAFDQ 148
Query: 119 AYRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+++ + R ++ ++L+S G + + LV+ SF+ L L V AL LL +
Sbjct: 149 IHQIPQEKIRPFWQSKLVSLGLTVGTILLLVLASFLVFISDLLLGMVVNKNGALIFLLHL 208
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + + F++ + + I+PG I I W + + LF Y+ F
Sbjct: 209 WQLLRWPLALGIVATAFSFIYRYGTSVWKPGTPIMPGAIIAAIFWAILSALFRLYVANFG 268
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y+ +Y + +++ +++L+M ++G +LN ++ K
Sbjct: 269 NYNKVYGAVGTVIVLMLWLWMSAAVLLIGDQLNVTVGEDMRSK 311
>gi|331010287|gb|EGH90343.1| ribonuclease BN [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 258
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 49/212 (23%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + I Q+ GL +I + A + +S GV + ++N AY VVE R
Sbjct: 8 LLPPQALEQVNPVIDQLQQSK-GGLLSIGIVIALWTASAGVRLMMSAMNAAYDVVEGRPI 66
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +S Y + + L+ + V P + ++ ++ + R A ++
Sbjct: 67 WKRLPLSILYTVGIAGMLLAAAAFMVLGPQVMNWIAAQIGMEDFIVTLWTILRWPAIIIL 126
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ +P K + I PG + + W+V ++ F Y+ TF+ Y+ MY + +I
Sbjct: 127 LMVAVALIYYVMPDVKQEFRFITPGSVLAVVVWIVASLAFGFYVKTFADYNAMYGSIGAI 186
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ L++ Y+ +LGAE+NA + K
Sbjct: 187 IVLLLYFYISAAVLLLGAEMNAVIEHMSAEGK 218
>gi|154244265|ref|YP_001415223.1| putative ribonuclease BN [Xanthobacter autotrophicus Py2]
gi|154158350|gb|ABS65566.1| putative ribonuclease BN [Xanthobacter autotrophicus Py2]
Length = 300
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 116/271 (42%), Positives = 159/271 (58%), Gaps = 1/271 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I DA F +DGWA+ASHI+LSAL+S+FPF++F LAGFL I
Sbjct: 10 LRRIIHIPLDAFWTFAADDGWAIASHIALSALMSLFPFLIFVTALAGFLNLQPLANETIQ 69
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ WP+ +A PI+ EI V+ + T + A YFSSNG+E+LRI LNRAY V E
Sbjct: 70 LILETWPQQVAGPISREIYNVVNQVRTDVLTYGVVLAIYFSSNGIESLRIGLNRAYGVKE 129
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
MRSWY RL S GYVLLA+V+++ +SF+ V PL PAL I R A
Sbjct: 130 MRSWYWLRLESIGYVLLAAVSMLALSFLVVLGPLLWQAAVAQVPALAPFSGAITLIRFGA 189
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYA 243
T + L + L+ HL+LPA + + + PG++ T + W+V A F Y+ F + Y + YA
Sbjct: 190 TAIILVVSLVVAHLWLPAGRRSLAEVAPGILVTLVLWLVAATAFGFYLAEFPANYVSTYA 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
GLAS+M LVFLY+ F+ G ELNA++
Sbjct: 250 GLASVMIALVFLYLTASIFVFGGELNAAIKR 280
>gi|240851358|ref|YP_002972761.1| ribonuclease RNAse BN transmembrane protein [Bartonella grahamii
as4aup]
gi|240268481|gb|ACS52069.1| ribonuclease RNAse BN transmembrane protein [Bartonella grahamii
as4aup]
Length = 288
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 111/278 (39%), Positives = 172/278 (61%), Gaps = 1/278 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F + I+ DA+ H+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P
Sbjct: 2 LRNIFWYSYRILVDAVSHYWRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AAYF+SNGVEALR +LNRAY
Sbjct: 62 QKIKALVQLLPDVIAEPLSQEIINVLTIQRGGVLTVSVIGAAYFASNGVEALRTALNRAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V+L +V L+++S + + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVILGAVGLIVISVLLILTPLLIKIMQNHPFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + ILPG++ T W + ++ F Y+ F Y +
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAERRKFIDILPGIVLTMFVWFMASIAFAQYLTMF-DYIS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGLASIM ++FLY+L FILG E+NA+++ +
Sbjct: 241 TYAGLASIMVAIIFLYILSAIFILGGEINAAIMFHRKH 278
>gi|224823604|ref|ZP_03696713.1| ribonuclease BN [Lutiella nitroferrum 2002]
gi|224604059|gb|EEG10233.1| ribonuclease BN [Lutiella nitroferrum 2002]
Length = 403
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 84/264 (31%), Gaps = 8/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
+A ++ + LL++ P + + + ++
Sbjct: 13 FARFLARRVGTHRVLQVAGSLTFTTLLALVPLLTIVLTVVAAFPVFADYSARFKLMLLST 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + ++ A A+ L + S + + + N + V R W
Sbjct: 73 LVPEFAGKVITVYMRQFADNAEKLTAAGIVMLGLTSLMLMSTIERTFNAIWSVRRSRPWL 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ + + L + ++ K L+ + ++
Sbjct: 133 QQGMVYWSVLTLGPIAFGGGLIG-------WHWLLKATHFERYSRLLDELLQRGGSIFLT 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ +P L G + T + V +F YI ++Y +Y ASI
Sbjct: 186 TVVLSLLYRVVPNRFVPYRHALWGALATALLLEVTKAVFGFYIGEVASYKLVYGAFASIP 245
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L+++Y L + + GA AS+
Sbjct: 246 ILLLWVYCLWLVVLTGAVFTASLS 269
>gi|163745909|ref|ZP_02153268.1| hypothetical protein OIHEL45_09993 [Oceanibulbus indolifex HEL-45]
gi|161380654|gb|EDQ05064.1| hypothetical protein OIHEL45_09993 [Oceanibulbus indolifex HEL-45]
Length = 311
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 83/259 (32%), Positives = 146/259 (56%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++++A+ +D + MA +++ ALL++FPF++F ++L + G +I +
Sbjct: 39 VLHEAVLRLWSDDAFGMAGNVAFRALLAIFPFLIFTSSLTAYFGDRSMADDLIHFLIAIV 98
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + +P+ E+ +V+ VP L ++ L +F+ GV+ +RI LNRAY + E RS +
Sbjct: 99 PPALIEPLVTEVEKVMTVPRGDLLSVGILLTVWFAVGGVDGVRIGLNRAYGLRETRSVFT 158
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ VLLAS+ LVI+ ++ V P A +++ P + + R + L
Sbjct: 159 IYAVQVVMVLLASLILVIVGYLLVLAPRAGSWLHMLMPGFDPGSVTVGLIRFPVSATILL 218
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L H+ LPA ++K +I PGV+ T I+W + A+LF+ Y+ +F+TYS+ YAG+A I+
Sbjct: 219 VALFAAHVILPARRTKFNNIWPGVVATAIAWTLLAMLFSTYLRSFATYSSYYAGMAGIIA 278
Query: 251 CLVFLYMLGVFFILGAELN 269
L F+Y+ + I G ELN
Sbjct: 279 ALYFMYLAALVLIFGGELN 297
>gi|254492253|ref|ZP_05105427.1| Ribonuclease BN-like family [Methylophaga thiooxidans DMS010]
gi|224462578|gb|EEF78853.1| Ribonuclease BN-like family [Methylophaga thiooxydans DMS010]
Length = 449
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 102/269 (37%), Gaps = 2/269 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ ++Y + A + + LLS+ P I ++ G H + ++
Sbjct: 39 WVNTLRVVYIMGRELATGELNLRAMSLVFTTLLSLVPLIAVAFSVLKAFGVHNQMEPLLL 98
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ E + ++ I V V L ++ Y V+ + + N +RV
Sbjct: 99 GLLEPLGERGPEITSNIIGFVQNVKVGVLGSVGLGMLFYTIIALVQKIENAFNFVWRVKR 158
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS V++ V ++ S + VA + V K + ++ G
Sbjct: 159 SRSMARRFADYLSVVMIGPV--LVFSALGVAATVVNHDVVKQLSEIEPFGTLLLVGTKLL 216
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + F++ F+P K K+ L G I W+ +F ++ + S Y+ +Y+
Sbjct: 217 PYVMIILAFTFLYKFIPNTKVKLSPALIGATVAGILWISIGTIFASFVASSSNYTAIYSS 276
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
A + +++LY+ + G+++ +
Sbjct: 277 FAILFFFMIWLYLAWFILLTGSQVAFYLQ 305
>gi|163802228|ref|ZP_02196123.1| ribonuclease BN [Vibrio sp. AND4]
gi|159174033|gb|EDP58843.1| ribonuclease BN [Vibrio sp. AND4]
Length = 314
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 35/268 (13%), Positives = 91/268 (33%), Gaps = 8/268 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGA 69
++ + A +++ LLS+ P + ++ + V T+ V
Sbjct: 22 FFQYLLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFENVGETLQGYVIDN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + ++ + + + + + +LN +RV + R
Sbjct: 82 FVPAAGDAVRTALQEFVSN-TGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRLPV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + + + +L L +
Sbjct: 141 FSFSMYWMVLTLGPILVGASIAATSYVTSLKLMENETLSGAYDLFLRWLPLLL------S 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++ +P K + G + + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFMGLYFLVPNKKVYLSHGAIGAAIAAVLFELSKKGFAFYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
V++Y+ + ++GAE+ A++
Sbjct: 255 ILFVWVYLCWLIVLIGAEVTAALGERER 282
>gi|226941891|ref|YP_002796965.1| hypothetical protein LHK_02978 [Laribacter hongkongensis HLHK9]
gi|288559232|sp|C1D515|Y2978_LARHH RecName: Full=UPF0761 membrane protein LHK_02978
gi|226716818|gb|ACO75956.1| ribonuclease BN, putative [Laribacter hongkongensis HLHK9]
Length = 422
Score = 132 bits (331), Expect = 7e-29, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 93/278 (33%), Gaps = 8/278 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FV 59
+ + ++ +A+ ++ + LLS+ P I + +
Sbjct: 9 LPPVLQRLTGFSLFVWRRAMQNRCLQVAASLTFTTLLSLVPLITITLIVVAAFPVFEELS 68
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + A I L+ A L + A+ S + + + + N
Sbjct: 69 SQFKEFLLRNLVPDFAGRIISVYLKQFTDNAGRLTAVGLALLAFTSLSLMLTIDRTFNAI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
++V R L+ + + L + L + A++ + +
Sbjct: 129 WQVQRPRKLLHNMLVYWTVLTLGPLLLGVGISG-------SAWILNWSGLARTAPGLAGI 181
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ + L ++ +P L G T ++ V F Y+ TY
Sbjct: 182 IQNLGSLTLATVMLTVLYGLVPNCYVPRWHALIGGALTALTLGVAQAGFGLYVEISRTYQ 241
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y A+ L++L ++ + ++GAEL AS+ +
Sbjct: 242 FIYGAFATFPFLLIWLQLMWLTVLIGAELTASLSYWKG 279
>gi|13488528|ref|NP_109535.1| BrkB (serum resistance)-like protein [Mesorhizobium loti
MAFF303099]
gi|14028282|dbj|BAB54874.1| BrkB (serum resistance) homolog [Mesorhizobium loti MAFF303099]
Length = 384
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 49/282 (17%), Positives = 108/282 (38%), Gaps = 4/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M F V+++ +A+ FV++D + + ++ A S+ P ++ +AG G
Sbjct: 45 MPLAFKDVWNVAREAVVGFVDDDALSHGAAMAFYATTSLAPVLLIVVAIAGLAFGHDAAQ 104
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNR 118
+ + G A + D + A + + + + +S ++ SLN+
Sbjct: 105 LALSAQISGLMGAGSAGILEDILKGASAKSSGTVAAILGTVTLFITASGVFGEMQQSLNK 164
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++V + + L L M V + A++ + F A I+
Sbjct: 165 IWKVEPNGGSISRLVRARAVSLGLVAALGFMLLVSLVASAAISTLGDFISARLPFGTIVL 224
Query: 179 NGRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + + + ++ LP K + G + T + +G L Y+ T +
Sbjct: 225 SVINTFVSFVLISAMFAAIYKVLPDRTLKWRDVAIGALVTAALFTIGKSLIGWYLGTSAV 284
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S+ Y ++ L+++Y F+LGAE + I + +
Sbjct: 285 ASS-YGAAGGLLVILLWVYYSSEIFLLGAEFTRAFSIRHGSR 325
>gi|281424786|ref|ZP_06255699.1| YihY family protein [Prevotella oris F0302]
gi|281401156|gb|EFB31987.1| YihY family protein [Prevotella oris F0302]
Length = 439
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 95/267 (35%), Gaps = 4/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V +Y AI F+E A+ +S S +L++ P + G +++ T
Sbjct: 27 KRTGLNVVRKMYMAIRLFIERGHVDYATQLSFSTILAIVPIFAMIFAIGRGFGLSKYIET 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P+ I+ + I L Y + + + N ++
Sbjct: 87 WLRSTLDSQPQAAESIISLADSYLQHAQTGLFIGIGLLFMLYSVLSLIYNVENVFNIIWQ 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS + + L V +++MS V + A L I
Sbjct: 147 VERKRSVGRFLADNLSMMFLVPVIIIVMSGVSI----IANTTTDHLQAFIILGPIARILV 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + I + + +P + K + + I I ++ + H + S Y+ +
Sbjct: 203 KLLPFVVLTLIFIALFVVMPNTRVKFSAAVGPAILAAILMLLVQWGYVHGQLFLSGYNAV 262
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y LA++ ++++ + + AEL
Sbjct: 263 YGSLAALPLFMLWMQISWYICLFCAEL 289
>gi|149183505|ref|ZP_01861932.1| hypothetical protein BSG1_15038 [Bacillus sp. SG-1]
gi|148848777|gb|EDL63000.1| hypothetical protein BSG1_15038 [Bacillus sp. SG-1]
Length = 280
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 63/246 (25%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + D +A+ ++ LLS+FP ++F L +L Q ++ V+ P
Sbjct: 15 KKLFQKISDGDVTGLAAQLAYFFLLSLFPLLIFLVTLLPYLPFSQ--QDILSVINDFAPG 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ I I +V++ GL + S +A + +SNG+ A+ SLN AY V E RS+ +TR
Sbjct: 73 ETMQMIQSTINEVMSNRNTGLLSFSIIATIWSASNGMNAIVKSLNDAYEVEESRSYIVTR 132
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+S + +I + V ++ F L I R + + LFI
Sbjct: 133 LMSIVLTIAMIFVFIIALLLPVFGKQIGLFLFSQFGFSDQFLTIWGAIRWAISPIILFIV 192
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ P+ K K +S +PG +F + WV ++ F++Y+ F YS Y + I+ +
Sbjct: 193 FVGLYFIAPSKKIKCLSAVPGAVFAALGWVGASLAFSYYVSNFGNYSATYGSIGGIIVLM 252
Query: 253 VFLYML 258
++ Y+
Sbjct: 253 IWFYLT 258
>gi|157147334|ref|YP_001454653.1| ribonuclease BN [Citrobacter koseri ATCC BAA-895]
gi|166199576|sp|A8AL54|Y3126_CITK8 RecName: Full=UPF0761 membrane protein CKO_03126
gi|157084539|gb|ABV14217.1| hypothetical protein CKO_03126 [Citrobacter koseri ATCC BAA-895]
Length = 290
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 97/280 (34%), Gaps = 10/280 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R + V + + E++ +A +++ +LLS+ P I L V
Sbjct: 10 RHHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSL 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + A+ +LN +
Sbjct: 70 QLRHFIFANFIPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + L +I N
Sbjct: 129 RSKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASELNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRVFPLILSWISFWLLYSIVPTTRVPNRDAVVGAFVAAVLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 280
>gi|33415360|gb|AAQ18212.1| probable ribonuclease [uncultured bacterium]
Length = 427
Score = 132 bits (331), Expect = 8e-29, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 91/267 (34%), Gaps = 9/267 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-- 63
+ + F E+ A ++ + +++ P L +
Sbjct: 39 WPWAQTLVTLRQRFREDRLGVTAGSLTFTTTIALVPLFTVMLALFSAFPVFARFRKTLEA 98
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ G P+ IAKP+ + + ++ L + +A A + + + +LN +RV
Sbjct: 99 QFIQGFVPDAIAKPVLLSLTKFALKASQ-LGGMGLIALAVTALALMLTIDRTLNAIWRVR 157
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R L+ + + L + L V + A + P
Sbjct: 158 TPRPVAQKVLVYWSALTLGPLVLGASLSVTSYLLSASRGLVDELPGGIEF------FLSL 211
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
G + F+P + G +F + +G + Y+ YST+Y
Sbjct: 212 VVFGLQTGGFALLFRFVPNTHVRWEHAWGGALFVSGALELGQKVLALYLGKVPIYSTIYG 271
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
A++ LV++Y+ V ++GA + A
Sbjct: 272 AFAAVPIFLVWIYLSWVIVLMGAVIAA 298
>gi|294499346|ref|YP_003563046.1| YihY family protein [Bacillus megaterium QM B1551]
gi|295704699|ref|YP_003597774.1| YihY family protein [Bacillus megaterium DSM 319]
gi|294349283|gb|ADE69612.1| YihY family protein [Bacillus megaterium QM B1551]
gi|294802358|gb|ADF39424.1| YihY family protein [Bacillus megaterium DSM 319]
Length = 276
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 57/257 (22%), Positives = 101/257 (39%), Gaps = 4/257 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
F E + A+ + LLS PFI+F +L F ++ + P+
Sbjct: 6 KTVAARFFTERFFDQAAQTAYYFLLSFVPFIIFLFSLLSFFPID--TNNLLIFIEPFTPK 63
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I I V K + + S LA + +S +++L SLN AY + +++
Sbjct: 64 SAYDVIERSIETV-NNSGKKVLSFSLLATFWLASMAIQSLVRSLNDAYHIQRKQTFLRGL 122
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ V + I FV + + V R L L
Sbjct: 123 INDLILTFGFMVVVAISLFVPIIEEVIRHLVLTKVHVPDIWFQSWTTIRWGIGTLFLLGF 182
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
I + +P+A+ +LPG +F+ + W V + F +Y+ F +YS +Y L SI+ +
Sbjct: 183 FILFYKLMPSARVTWKDVLPGAVFSTLGWQVVSTGFGYYV-QFGSYSQIYGQLGSIIILM 241
Query: 253 VFLYMLGVFFILGAELN 269
V+ Y+ ++G +N
Sbjct: 242 VWFYLTAAILLIGGLIN 258
>gi|299142048|ref|ZP_07035182.1| YihY family protein [Prevotella oris C735]
gi|298576510|gb|EFI48382.1| YihY family protein [Prevotella oris C735]
Length = 439
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 95/267 (35%), Gaps = 4/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V +Y AI F+E A+ +S S +L++ P + G +++ T
Sbjct: 27 KRTGLNVVRKMYMAIRLFIERGHVDYATQLSFSTILAIVPIFAMIFAIGRGFGLSKYIET 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P+ I+ + I L Y + + + N ++
Sbjct: 87 WLRSTLDSQPQAAESIISLADSYLQHAQTGLFIGIGLLFMLYSVLSLIYNVENVFNIIWQ 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS + + L V +++MS V + A L I
Sbjct: 147 VERKRSVGRFLADNLSMMFLVPVIIIVMSGVSI----IANTTTDHLQAFIILGPIARILV 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + I + + +P + K + + I I ++ + H + S Y+ +
Sbjct: 203 KLLPFVVLTLIFIALFVVMPNTRVKFSAAVGPAILAAILMLLVQWGYVHGQLFLSGYNAV 262
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y LA++ ++++ + + AEL
Sbjct: 263 YGSLAALPLFMLWMQISWYICLFCAEL 289
>gi|322421254|ref|YP_004200477.1| ribonuclease BN [Geobacter sp. M18]
gi|320127641|gb|ADW15201.1| ribonuclease BN [Geobacter sp. M18]
Length = 447
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 110/275 (40%), Gaps = 5/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ A +F+ +G A+ +S + LLS+ P + ++ LGA ++ +
Sbjct: 31 LRLLQFTSHAFSNFMANNGLLRATALSFTTLLSLVPLLALAFSVLKGLGAQN---RLVPL 87
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V + + I + + I +A + + + + ++ + +R + V E
Sbjct: 88 VLKQVTAGNEEVVNRVISYIDNTNMGSVGAIGLVALLFTAISMLGSIEEAFDRIWGVPET 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+Y ++ A + L+ + + + ++ + L +
Sbjct: 148 RSFYRKFSDYLSVLVSAPLLLLAATSITTTLQ--SKWLIGWILERTYLGDLFLFTLGLTP 205
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L ++I L +++F+P + + S L G + W + H+ V Y+ +Y L
Sbjct: 206 YLVVWIALFLLYVFIPNIRVRFDSALIGAVLAGTLWESAQWAYIHFQVGAGNYNAIYGTL 265
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ ++++Y+ V + G E+ A+ ++
Sbjct: 266 AALPVLMIWIYVSWVIVLFGMEMVAAHQNRSTFRR 300
>gi|182418163|ref|ZP_02949463.1| YihY family protein [Clostridium butyricum 5521]
gi|237666283|ref|ZP_04526270.1| YihY family protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377981|gb|EDT75521.1| YihY family protein [Clostridium butyricum 5521]
gi|237658373|gb|EEP55926.1| YihY family protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 285
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 2/277 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ +++ I ++D +A++S ++ +LS FPF++F L GF
Sbjct: 5 KFSIRRQINLLIHLIVKIKKDDVFALSSQLAYYLILSFFPFMIFLITLIGFSHLSSV--E 62
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V+D + P I I +V+ GL +S L + SS+ A+ +N+AY
Sbjct: 63 VLDNLNAILPTSIVDLTKSIIAEVVDNQHTGLLGVSVLLMIWTSSSAFRAVIKGVNKAYG 122
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS+ +IS ++L +V +++ + V + AY+ P ++ + R
Sbjct: 123 FKENRSFIKRSIISMIGIILLAVIILLALAMLVFGNVIGAYIISRIPFYKIIIFLWNMFR 182
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++F PA + K+ ++PG +F+ + W+ + F+ YI F YS
Sbjct: 183 YAFVFIVMIFIFALMYMFAPAKRLKLKEVVPGSVFSTMGWIAVSFGFSFYINNFGNYSRF 242
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L ++ + +L+++ + FILG E+N M ++
Sbjct: 243 YGSLGAVFILMTWLFLISMIFILGVEINCVMSQIKYK 279
>gi|91975407|ref|YP_568066.1| ribonuclease BN [Rhodopseudomonas palustris BisB5]
gi|91681863|gb|ABE38165.1| ribonuclease BN [Rhodopseudomonas palustris BisB5]
Length = 297
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 109/278 (39%), Positives = 164/278 (58%), Gaps = 2/278 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
V+ + DA F+ +DGWA+ASHI+LS+L+++FPF++ +LAGF G+
Sbjct: 2 RQIRYVYAVGMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSLAGFFGSKDLADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ EI VL G TI + A YF+SNGVE+LR++LNRAY V
Sbjct: 62 AELLLDIWPAQVASTLSGEIHDVLTTTRGGALTIGLVLALYFASNGVESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWNGR 181
+E+R WY+ RL S GY L+A+ T + M+F+ V PL LA R + P L + ++ R
Sbjct: 122 IEVRPWYLLRLESIGYTLVAAFTALAMAFLIVLGPLILATARHYVPLLVEDNQTLLTVAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ AL + L+ +H LPA + I PG+ FT ++ + + F Y+ F+ Y T
Sbjct: 182 YGITIGALILALVILHARLPAGHRTLKQIAPGIAFTIVASLASGMGFGFYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
MYAGLAS++ LVFLY + F+ G ELNA++I
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLP 279
>gi|170742693|ref|YP_001771348.1| ribonuclease BN [Methylobacterium sp. 4-46]
gi|168196967|gb|ACA18914.1| ribonuclease BN [Methylobacterium sp. 4-46]
Length = 293
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 102/277 (36%), Positives = 151/277 (54%), Gaps = 1/277 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+I A + FV DGWA+ASHI+LS L S+FPF++ LA G
Sbjct: 2 RLRTALEIAAIAAQRFVAHDGWAIASHIALSLLTSLFPFLILLTALASVFGTKSLADEAS 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+++F WP +A P+ E+ +VL G+ TI AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 62 NLLFEVWPSEVAGPVAAEVHRVLTEQRGGILTIGALLALYFSSSGVESLRVGLNRAYGLR 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R W++TRL S GYV+ + ++ +F+ V PL + P + L L I R+
Sbjct: 122 ESRPWWLTRLESIGYVICGAFAMLAFTFLVVLGPLVWRALVMVAPGIEPLGLTIAVVRVA 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T L + + L+ H F+ A + +LPGV T WV+ + F Y+ FS+ Y + Y
Sbjct: 182 LTALLIALVLVIAHKFIAAGRRPWHMVLPGVAVTLGMWVIAGLGFGTYLDRFSSAYVSTY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLA+ M L+F+Y L F+ G E+N ++I R+
Sbjct: 242 GGLATAMVFLIFVYWLAAMFLFGGEVNGTLIAARRRR 278
>gi|88858617|ref|ZP_01133258.1| tRNA processing exoribonuclease BN [Pseudoalteromonas tunicata D2]
gi|88818843|gb|EAR28657.1| tRNA processing exoribonuclease BN [Pseudoalteromonas tunicata D2]
Length = 294
Score = 131 bits (330), Expect = 9e-29, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 104/271 (38%), Gaps = 8/271 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTV 62
++ + + E+ A +++ LLS+ P + + + F +
Sbjct: 15 ILLKLYAWLQLYVRRCQEDAITVNAGYLAYVTLLSLVPLMAVAVAIFSAFPVFESFREGI 74
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +F + ++ I + I +K + TI + + + +LNR +R+
Sbjct: 75 ENFIFTNFVPTSSEVIREHIGAFAGNASK-MTTIGVGFLVVVALFLIRNVDGTLNRIWRI 133
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R+ I+ I + + L V L V I + + P L +L +
Sbjct: 134 DKKRNPMISFAIYWMVLTLGPVLLGASLGVTSYILSLASIAEQGIPGLSGFILTL----- 188
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ +P + + LPG +F I + + F Y+ F +Y +Y
Sbjct: 189 -IPYFISILTFTLLYTIVPNTEVPFRAALPGAVFAAILFELSKQGFARYVSEFPSYEVIY 247
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
LA++ V++Y+ + +LGAE+ +
Sbjct: 248 GALATVPILFVWVYLSWIVVLLGAEVTVCIQ 278
>gi|15642735|ref|NP_232368.1| ribonuclease BN [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121586586|ref|ZP_01676371.1| YihY family protein [Vibrio cholerae 2740-80]
gi|121726682|ref|ZP_01679907.1| YihY family protein [Vibrio cholerae V52]
gi|147674039|ref|YP_001218229.1| ribonuclease BN [Vibrio cholerae O395]
gi|153817436|ref|ZP_01970103.1| YihY family protein [Vibrio cholerae NCTC 8457]
gi|153821261|ref|ZP_01973928.1| YihY family protein [Vibrio cholerae B33]
gi|227082856|ref|YP_002811407.1| ribonuclease BN [Vibrio cholerae M66-2]
gi|229507211|ref|ZP_04396716.1| ribonuclease BN [Vibrio cholerae BX 330286]
gi|229509868|ref|ZP_04399349.1| ribonuclease BN [Vibrio cholerae B33]
gi|229516989|ref|ZP_04406435.1| ribonuclease BN [Vibrio cholerae RC9]
gi|229606717|ref|YP_002877365.1| ribonuclease BN [Vibrio cholerae MJ-1236]
gi|254851279|ref|ZP_05240629.1| tRNA-processing ribonuclease BN [Vibrio cholerae MO10]
gi|255743715|ref|ZP_05417674.1| ribonuclease BN [Vibrio cholera CIRS 101]
gi|262158589|ref|ZP_06029704.1| ribonuclease BN [Vibrio cholerae INDRE 91/1]
gi|262170018|ref|ZP_06037707.1| ribonuclease BN [Vibrio cholerae RC27]
gi|298500444|ref|ZP_07010248.1| YihY family protein [Vibrio cholerae MAK 757]
gi|32699651|sp|Q9KNJ6|Y2742_VIBCH RecName: Full=UPF0761 membrane protein VC_2742
gi|172047528|sp|A5F4Q8|Y3514_VIBC3 RecName: Full=UPF0761 membrane protein VC0395_A2314/VC395_2854
gi|254789782|sp|C3LSG9|Y2662_VIBCM RecName: Full=UPF0761 membrane protein VCM66_2662
gi|288559223|sp|C3NUE6|Y1626_VIBCJ RecName: Full=UPF0761 membrane protein VCD_001626
gi|9657340|gb|AAF95881.1| ribonuclease BN [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121549145|gb|EAX59178.1| YihY family protein [Vibrio cholerae 2740-80]
gi|121630843|gb|EAX63225.1| YihY family protein [Vibrio cholerae V52]
gi|126512022|gb|EAZ74616.1| YihY family protein [Vibrio cholerae NCTC 8457]
gi|126521193|gb|EAZ78416.1| YihY family protein [Vibrio cholerae B33]
gi|146315922|gb|ABQ20461.1| yihY family protein [Vibrio cholerae O395]
gi|227010744|gb|ACP06956.1| ribonuclease BN [Vibrio cholerae M66-2]
gi|227014628|gb|ACP10838.1| ribonuclease BN [Vibrio cholerae O395]
gi|229346052|gb|EEO11024.1| ribonuclease BN [Vibrio cholerae RC9]
gi|229353342|gb|EEO18281.1| ribonuclease BN [Vibrio cholerae B33]
gi|229354716|gb|EEO19637.1| ribonuclease BN [Vibrio cholerae BX 330286]
gi|229369372|gb|ACQ59795.1| ribonuclease BN [Vibrio cholerae MJ-1236]
gi|254846984|gb|EET25398.1| tRNA-processing ribonuclease BN [Vibrio cholerae MO10]
gi|255738645|gb|EET94031.1| ribonuclease BN [Vibrio cholera CIRS 101]
gi|262021426|gb|EEY40138.1| ribonuclease BN [Vibrio cholerae RC27]
gi|262029750|gb|EEY48399.1| ribonuclease BN [Vibrio cholerae INDRE 91/1]
gi|297540613|gb|EFH76670.1| YihY family protein [Vibrio cholerae MAK 757]
Length = 297
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 90/275 (32%), Gaps = 6/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI A + L + + + + + +LN +
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + I L +
Sbjct: 128 RVQQKRRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGVYNLF 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 182 LRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQL 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 242 IYGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|326800466|ref|YP_004318285.1| ribonuclease BN [Sphingobacterium sp. 21]
gi|326551230|gb|ADZ79615.1| ribonuclease BN [Sphingobacterium sp. 21]
Length = 329
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 57/269 (21%), Positives = 120/269 (44%), Gaps = 3/269 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDV 65
++ + + E AS ++ S +L++FP I+F L + + F +++
Sbjct: 34 LYTVGLFFFQEIARESLLNKASSLAYSFMLAIFPGIIFLFTLIPYIKVFIDDFQEQLLEF 93
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE K I +L ++ GL + L A F++NG+ +L + N++ V+E
Sbjct: 94 MQMILPENAYKTIESTLLDIVTNQNSGLLSFGFLMAMIFATNGIHSLMRAFNKSSLVLES 153
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIYA 184
RS+ RL++ ++ + L I + + +++ G +I R
Sbjct: 154 RSFVKQRLVALALAIMIIMALTIGMGIVTLASFIINHLKNTIEITGGFWTWLIGITRWII 213
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ F L ++ + P++ K PG + + F YI F+TY+ +Y
Sbjct: 214 LLGIYFFTLSILYKYGPSSSRKWSFFSPGATLATVLAALTFWGFAFYINNFNTYNKLYGS 273
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
+ +++ +++LY+ + ++G ELNAS+
Sbjct: 274 IGTLIVIMIWLYLNSLILLIGFELNASIA 302
>gi|222055690|ref|YP_002538052.1| ribonuclease BN [Geobacter sp. FRC-32]
gi|221564979|gb|ACM20951.1| ribonuclease BN [Geobacter sp. FRC-32]
Length = 308
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/219 (21%), Positives = 100/219 (45%), Gaps = 4/219 (1%)
Query: 59 VPTVIDVVFG----AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+P ++D + PE + D + + GL ++ + A + SSN + ++
Sbjct: 62 IPGLLDFILTTMQRFLPEQAFSLVQDNVKSLFGNKQGGLLSLGFVLALWTSSNAITSIMD 121
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+NR Y+V E R ++ RL + V + SV ++ + + P +++
Sbjct: 122 IMNRLYQVQEGRPFWKVRLTAIALVTVLSVLFILSLVLLMFGPKLGSFIAGITHLGHFFE 181
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ AT+ L + + ++ F P + I PG + WV+ ++ F+ Y+
Sbjct: 182 ILWNILIAPATLFMLMLAIAIIYYFTPDVEQNWKWISPGAVIAIPVWVLASLAFSFYVNN 241
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
F +Y+ Y + +++ L +LY+ G + GAE+N+++
Sbjct: 242 FGSYNKTYGSIGAVIILLFWLYISGFIILAGAEINSAVE 280
>gi|288928180|ref|ZP_06422027.1| YihY family protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288331014|gb|EFC69598.1| YihY family protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 440
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 99/264 (37%), Gaps = 4/264 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + ++ F +AS ++ S +L++ P + +A G +++
Sbjct: 34 VLKRLVVTVKFFTTRSVTDLASALTYSTVLAIVPIVAVVFAIARGFGFSKYIEVWFRDAL 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ P+ I ++ I + + + + + N ++V RS
Sbjct: 94 SSQPQAAETIIGFVNSYLVHTKGGVFLGIGLVFMLFTVLMLISNIEKAFNSIWQVQHPRS 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ T L + +V+ S V + + + ++ + L+I +
Sbjct: 154 LFRTITDYLAMFFLVPIVIVVTSGVSIVMATFAQDINEYVVLGPMMRLVIT----VMPYV 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + +F+P K + I + I+ + V + H + S+Y+ +Y A+
Sbjct: 210 LMSAVFVCLFIFMPNTKVNFSAAFLPGILSGIAMQLLQVFYIHSQIFLSSYNAIYGSFAA 269
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ ++++ + + GAEL+ +
Sbjct: 270 LPLFMLWVQISWSICLFGAELSYT 293
>gi|222110332|ref|YP_002552596.1| ribonuclease bn [Acidovorax ebreus TPSY]
gi|221729776|gb|ACM32596.1| ribonuclease BN [Acidovorax ebreus TPSY]
Length = 429
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 100/258 (38%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
E F E+ AS ++ + LL++ PF+ + + V+ +V P+ I
Sbjct: 33 ERFREDRLGLTASSLTFTTLLALVPFVTVALAMFTVFPMFAEMQLVLQRWLVDSLVPDSI 92
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++P+ + Q A A GL + + + +LN +RV +R LI
Sbjct: 93 SRPVLGYLTQF-AAKAHGLGAAGLSILMVTALALILTIDRTLNNIWRVQRLRPLGQRVLI 151
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + ++ A + L L G+
Sbjct: 152 YWAALTLGPLVLAASLALTTSVASAASR-----GIGDTLPGGARLLFDAIEFFVLAAGMA 206
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F + + + + Y+ + TYS +Y A++ L++
Sbjct: 207 ALYRYVPNTQVHWRHAWAGGVFVAVGIELAKKVLSLYLASVPTYSVLYGTFATLPILLLW 266
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 267 VYVAWVIVLLGAVVAAYL 284
>gi|17986373|ref|NP_539007.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|62290826|ref|YP_222619.1| ribonuclease BN [Brucella abortus bv. 1 str. 9-941]
gi|82700738|ref|YP_415312.1| ribonuclease BN [Brucella melitensis biovar Abortus 2308]
gi|189025045|ref|YP_001935813.1| Ribonuclease BN [Brucella abortus S19]
gi|237816340|ref|ZP_04595333.1| YihY family protein [Brucella abortus str. 2308 A]
gi|254690116|ref|ZP_05153370.1| Ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|254694606|ref|ZP_05156434.1| Ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|254696231|ref|ZP_05158059.1| Ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|254731149|ref|ZP_05189727.1| Ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|256045579|ref|ZP_05448459.1| Ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|256258370|ref|ZP_05463906.1| Ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|260546093|ref|ZP_05821833.1| ribonuclease BN [Brucella abortus NCTC 8038]
gi|260562890|ref|ZP_05833376.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|260755655|ref|ZP_05868003.1| ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|260758880|ref|ZP_05871228.1| ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|260760604|ref|ZP_05872947.1| ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|260884680|ref|ZP_05896294.1| ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|261214930|ref|ZP_05929211.1| ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|265992003|ref|ZP_06104560.1| ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|297247212|ref|ZP_06930930.1| ribonuclease BN [Brucella abortus bv. 5 str. B3196]
gi|17981963|gb|AAL51271.1| ribonuclease bn [Brucella melitensis bv. 1 str. 16M]
gi|62196958|gb|AAX75258.1| ribonuclease BN, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82616839|emb|CAJ11935.1| Ribonuclease BN [Brucella melitensis biovar Abortus 2308]
gi|189020617|gb|ACD73339.1| Ribonuclease BN [Brucella abortus S19]
gi|237788407|gb|EEP62622.1| YihY family protein [Brucella abortus str. 2308 A]
gi|260096200|gb|EEW80076.1| ribonuclease BN [Brucella abortus NCTC 8038]
gi|260152906|gb|EEW87998.1| ribonuclease BN [Brucella melitensis bv. 1 str. 16M]
gi|260669198|gb|EEX56138.1| ribonuclease BN [Brucella abortus bv. 4 str. 292]
gi|260671036|gb|EEX57857.1| ribonuclease BN [Brucella abortus bv. 2 str. 86/8/59]
gi|260675763|gb|EEX62584.1| ribonuclease BN [Brucella abortus bv. 6 str. 870]
gi|260874208|gb|EEX81277.1| ribonuclease BN [Brucella abortus bv. 9 str. C68]
gi|260916537|gb|EEX83398.1| ribonuclease BN [Brucella abortus bv. 3 str. Tulya]
gi|263003069|gb|EEZ15362.1| ribonuclease BN [Brucella melitensis bv. 1 str. Rev.1]
gi|297174381|gb|EFH33728.1| ribonuclease BN [Brucella abortus bv. 5 str. B3196]
Length = 286
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 182/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|332531034|ref|ZP_08406953.1| putative ribonuclease BN [Hylemonella gracilis ATCC 19624]
gi|332039515|gb|EGI75922.1| putative ribonuclease BN [Hylemonella gracilis ATCC 19624]
Length = 408
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 95/267 (35%), Gaps = 14/267 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DV 65
+ + E F E+ A ++ + +++ P + L V+ +
Sbjct: 27 WRNTAWTLRERFREDRLGQTAGSLTFTTTIALVPLLTVALALITAFPMFAKFQDVLQKWL 86
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE I++ + I Q + A L + + + + N +RV
Sbjct: 87 IESLVPENISRQVLAYISQF-SRRAGRLGWTGLGVLFLTALGLIFTIDRTFNALWRVQRP 145
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++ L+ + + L + +++ + +L +
Sbjct: 146 RAFGQRLLVYWAAITLGPLLVMLSLLGTSYLGPTA-----------SLPPGLRLALDLFE 194
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + L V+ ++P + K + G I I+ L Y+ TYS +Y
Sbjct: 195 SLTAALALAAVYHYVPNTRVKWLHAWTGAILATIALEGAKKLLGFYLKAVPTYSAVYGAF 254
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A++ L+++YM V +LGA + A +
Sbjct: 255 ATVPILLIWIYMAWVIVLLGAVITAYL 281
>gi|299535175|ref|ZP_07048499.1| transport protein [Lysinibacillus fusiformis ZC1]
gi|298729296|gb|EFI69847.1| transport protein [Lysinibacillus fusiformis ZC1]
Length = 305
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 65/272 (23%), Positives = 121/272 (44%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I D I + A+A+ ++ LLS FP ++F L +L V +
Sbjct: 34 FIQDLIGRLKRVEISALAAQLAYFFLLSFFPLLIFLVTLLPYLNLE--TTQVYSFLVNIL 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLNEILTNRNSSLLSIGVLGTIWSASKGINALLRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + + + + + V ++ + R L +F
Sbjct: 151 DRGLSLVFTIALVIVIAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHRLRWSIPPLLIF 210
Query: 191 IGLIFVHLFLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I L+ ++ F+P + KIM + PG +F ++W+ F+ YI F+ YS Y + +
Sbjct: 211 IVLMGIYWFVPNTSPRLKIMGVWPGALFATLAWLAVTYGFSFYINNFANYSATYGSIGGV 270
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++LY G+ I G LNA+M +K+
Sbjct: 271 IILMLWLYFTGIILIFGGVLNATMQKRALQKE 302
>gi|270265252|ref|ZP_06193514.1| hypothetical protein SOD_l01020 [Serratia odorifera 4Rx13]
gi|270040886|gb|EFA13988.1| hypothetical protein SOD_l01020 [Serratia odorifera 4Rx13]
Length = 296
Score = 131 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 93/269 (34%), Gaps = 8/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWP 71
+ + +A H++ +LLS+ P I L + + +F +
Sbjct: 21 RLLFQRVDNDGLTMLAGHLAYVSLLSLVPLITVVFALFAAFPMFSDISVQLKSFIFSNFM 80
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + Q +A K + + + + ++ LN +R R +
Sbjct: 81 PAAGNVIQSYLEQFVANSNK-MTAVGTCGLIVTALLLISSVDSVLNTIWRSKNKRPIVFS 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + A + ++ ++ ++
Sbjct: 140 FAVYWMVLTLGPLLVGASMAISSYLLSL------NWLAQTGVNSLVEQVLRIFPLILSWV 193
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ +P + L G + + + +G F YI F +Y +Y LA I
Sbjct: 194 SFWLLYCIVPTVRVPPKDALIGALVAGVLFELGKKGFALYITMFPSYQLIYGVLAVIPIL 253
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y ++
Sbjct: 254 FLWVYWSWCIVLLGAEITVTLGEYRDYRR 282
>gi|110637484|ref|YP_677691.1| hypothetical protein CHU_1074 [Cytophaga hutchinsonii ATCC 33406]
gi|110280165|gb|ABG58351.1| conserved hypothetical protein [Cytophaga hutchinsonii ATCC 33406]
Length = 313
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 114/269 (42%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + +D A I+ LS+FP I+F L ++ ++ + G
Sbjct: 43 FLRILFKKLNNDDINVRAKSITYDFFLSIFPGIIFLFTLIPYIPIPDLDKNILSAISGFL 102
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + + ++ +P GL + L A Y ++NG+ ++ + N Y+ + RS+
Sbjct: 103 PQNIYVSVESTLTDIINIPRGGLLSFGFLFAFYAANNGIISVINTFNHCYKTTDDRSFIA 162
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
IS + L + +V + + L + F L + R++ +
Sbjct: 163 KLGISISILFLLFLVVVGGIVITWFLKLLYTNLENGFDVSSFQLYFVAFLRLFVMFFLII 222
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + ++ P+ + G + I V + F YI F++Y+ +Y + +++
Sbjct: 223 MSISIMYFIAPSIHKRWKFFSLGSVTASILCFVFNLGFGFYIEHFNSYNKVYGSIGALIG 282
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+ +++ + ++G ++NAS+ + + +
Sbjct: 283 FLLLIFVNILMLLVGFQINASLELAHKNE 311
>gi|304312329|ref|YP_003811927.1| tRNA-processing ribonuclease BN [gamma proteobacterium HdN1]
gi|301798062|emb|CBL46284.1| tRNA-processing ribonuclease BN [gamma proteobacterium HdN1]
Length = 422
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 103/272 (37%), Gaps = 2/272 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ +I+ A + + LLSV P + ++ LG H +
Sbjct: 26 QRILLRTSRVIFATGRDIAAGTLTLHAMSLVYTTLLSVVPLLALSFSVLKALGVHNELEP 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ F + + V + L ++ Y + ++ + S N ++
Sbjct: 86 LLFQFFSPLGPQGVQLAEQILGFVDNMKVGVLGSVGLATLVYTVVSLIQKIERSFNMIWQ 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V MRS +L+ + +V V +I + V ++ + L +I
Sbjct: 146 VSRMRSLPERFSSYLSVILIGPILMVAAIGVTASIMNSS--VVQYLIGVEPLGTLIIELA 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + FV+ F+P + K + L + + W +LF +++V S Y +
Sbjct: 204 QFTPFLLVMVAFSFVYAFMPNTRVKFIPALMAGVIAGLIWQTVGMLFANFVVQSSKYEAV 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y+ A + L+++Y + ++GA L+ +
Sbjct: 264 YSSFAIGIVMLIWIYTSWLILLIGATLSYYIQ 295
>gi|332708514|ref|ZP_08428488.1| putative membrane protein [Lyngbya majuscula 3L]
gi|332352611|gb|EGJ32177.1| putative membrane protein [Lyngbya majuscula 3L]
Length = 323
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/287 (18%), Positives = 109/287 (37%), Gaps = 14/287 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
+ ++ + + + E++ +A+ +S + S+ P ++ + G G +++
Sbjct: 11 KAILGLLKETFKEWKEDNASRLAAALSYYMIFSLAPVLIIAIAIVGSIFGEEAAKGEIVE 70
Query: 65 VVFGAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G E A+ I I IS + + +S L+ +LN + V
Sbjct: 71 QIQGLVGEQGAQFIQTAITNANRPDASGGLASLISIVVLLFGASGVFGELQDALNTIWDV 130
Query: 123 VEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-----FPALGN 172
R++SF VL + L++ + + A+ +Y +F L
Sbjct: 131 KLKPGRGIWGILKKRILSFLTVLGVGLFLLLSAVISTALSAVRSYKSEFLQELGLLWLYQ 190
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L + + + L + V+ +LP K + G I T + + +G L + Y+
Sbjct: 191 LDFVWTILDLLVSFGILSLMFALVYKYLPDVKIAWKDVWVGAIITTLLFNLGKWLLSWYL 250
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++S+ Y S++ L ++Y LGAE + K
Sbjct: 251 GR-SSFSSSYGAAGSLVVLLAWVYYSSQIIFLGAEFTQVYAKIFGSK 296
>gi|152980856|ref|YP_001353869.1| ribonuclease BN transmembrane protein [Janthinobacterium sp.
Marseille]
gi|288559228|sp|A6T022|Y2179_JANMA RecName: Full=UPF0761 membrane protein mma_2179
gi|151280933|gb|ABR89343.1| ribonuclease BN transmembrane protein [Janthinobacterium sp.
Marseille]
Length = 435
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 107/277 (38%), Gaps = 9/277 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI- 63
+ V ++ + A EE +A ++ + +L++ P + + T +
Sbjct: 14 WSQVRNLFHFAARRLTEERLPQVAGSLTFTTVLALVPILTIALAIFTTFPLFNTFRTSLE 73
Query: 64 -DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
V P+ IA I + Q + A L A+A + + + N+ +RV
Sbjct: 74 AYFVHNLMPKGIANTILGYLTQF-SSKATRLSAFGAVALIVTAVAMMLMIDRVFNQIWRV 132
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R L+ + V L + + + A V + P +G +
Sbjct: 133 KTKRPIVQRILVYWAIVTLGPLLIGASMTFTSYLFTATDGVVRGVPFVGAVFYTS----- 187
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++L + +++ +P + + G + I++ + LF +++ TY+ +Y
Sbjct: 188 -ISILLSMVAFTSLYIVVPNRLVEWRDAVVGGLLAAIAFEIVKRLFAAFVIKVPTYTVVY 246
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+A+ LV++Y+ + + GA + A++ I + +
Sbjct: 247 GAVAAFPIFLVWVYLGWLITLAGAVVTAALPIVKYER 283
>gi|23502826|ref|NP_698953.1| ribonuclease BN [Brucella suis 1330]
gi|148559336|ref|YP_001259795.1| YihY family protein [Brucella ovis ATCC 25840]
gi|161619896|ref|YP_001593783.1| YihY family protein [Brucella canis ATCC 23365]
gi|225628177|ref|ZP_03786212.1| YihY family protein [Brucella ceti str. Cudo]
gi|254704986|ref|ZP_05166814.1| YihY family protein [Brucella suis bv. 3 str. 686]
gi|254707499|ref|ZP_05169327.1| YihY family protein [Brucella pinnipedialis M163/99/10]
gi|254708961|ref|ZP_05170772.1| YihY family protein [Brucella pinnipedialis B2/94]
gi|254713610|ref|ZP_05175421.1| YihY family protein [Brucella ceti M644/93/1]
gi|254716036|ref|ZP_05177847.1| YihY family protein [Brucella ceti M13/05/1]
gi|254718029|ref|ZP_05179840.1| YihY family protein [Brucella sp. 83/13]
gi|256030488|ref|ZP_05444102.1| YihY family protein [Brucella pinnipedialis M292/94/1]
gi|256059950|ref|ZP_05450134.1| YihY family protein [Brucella neotomae 5K33]
gi|256158474|ref|ZP_05456372.1| YihY family protein [Brucella ceti M490/95/1]
gi|256253893|ref|ZP_05459429.1| YihY family protein [Brucella ceti B1/94]
gi|256370380|ref|YP_003107891.1| ribonuclease BN, putative [Brucella microti CCM 4915]
gi|260169395|ref|ZP_05756206.1| ribonuclease BN, putative [Brucella sp. F5/99]
gi|260567540|ref|ZP_05838010.1| ribonuclease BN [Brucella suis bv. 4 str. 40]
gi|261217804|ref|ZP_05932085.1| ribonuclease BN [Brucella ceti M13/05/1]
gi|261221030|ref|ZP_05935311.1| ribonuclease BN [Brucella ceti B1/94]
gi|261314982|ref|ZP_05954179.1| ribonuclease BN [Brucella pinnipedialis M163/99/10]
gi|261316460|ref|ZP_05955657.1| ribonuclease BN [Brucella pinnipedialis B2/94]
gi|261321348|ref|ZP_05960545.1| ribonuclease BN [Brucella ceti M644/93/1]
gi|261323921|ref|ZP_05963118.1| ribonuclease BN [Brucella neotomae 5K33]
gi|261755687|ref|ZP_05999396.1| ribonuclease BN [Brucella suis bv. 3 str. 686]
gi|261758917|ref|ZP_06002626.1| ribonuclease BN [Brucella sp. F5/99]
gi|265982976|ref|ZP_06095711.1| ribonuclease BN [Brucella sp. 83/13]
gi|265987530|ref|ZP_06100087.1| ribonuclease BN [Brucella pinnipedialis M292/94/1]
gi|265996990|ref|ZP_06109547.1| ribonuclease BN [Brucella ceti M490/95/1]
gi|306837589|ref|ZP_07470460.1| YihY family protein [Brucella sp. NF 2653]
gi|306842886|ref|ZP_07475523.1| YihY family protein [Brucella sp. BO2]
gi|306843415|ref|ZP_07476016.1| YihY family protein [Brucella sp. BO1]
gi|23348851|gb|AAN30868.1| ribonuclease BN, putative [Brucella suis 1330]
gi|148370593|gb|ABQ60572.1| YihY family protein [Brucella ovis ATCC 25840]
gi|161336707|gb|ABX63012.1| YihY family protein [Brucella canis ATCC 23365]
gi|225617002|gb|EEH14049.1| YihY family protein [Brucella ceti str. Cudo]
gi|256000543|gb|ACU48942.1| ribonuclease BN, putative [Brucella microti CCM 4915]
gi|260157058|gb|EEW92138.1| ribonuclease BN [Brucella suis bv. 4 str. 40]
gi|260919614|gb|EEX86267.1| ribonuclease BN [Brucella ceti B1/94]
gi|260922893|gb|EEX89461.1| ribonuclease BN [Brucella ceti M13/05/1]
gi|261294038|gb|EEX97534.1| ribonuclease BN [Brucella ceti M644/93/1]
gi|261295683|gb|EEX99179.1| ribonuclease BN [Brucella pinnipedialis B2/94]
gi|261299901|gb|EEY03398.1| ribonuclease BN [Brucella neotomae 5K33]
gi|261304008|gb|EEY07505.1| ribonuclease BN [Brucella pinnipedialis M163/99/10]
gi|261738901|gb|EEY26897.1| ribonuclease BN [Brucella sp. F5/99]
gi|261745440|gb|EEY33366.1| ribonuclease BN [Brucella suis bv. 3 str. 686]
gi|262551458|gb|EEZ07448.1| ribonuclease BN [Brucella ceti M490/95/1]
gi|264659727|gb|EEZ29988.1| ribonuclease BN [Brucella pinnipedialis M292/94/1]
gi|264661568|gb|EEZ31829.1| ribonuclease BN [Brucella sp. 83/13]
gi|306276106|gb|EFM57806.1| YihY family protein [Brucella sp. BO1]
gi|306286973|gb|EFM58490.1| YihY family protein [Brucella sp. BO2]
gi|306407296|gb|EFM63504.1| YihY family protein [Brucella sp. NF 2653]
Length = 286
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 183/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|116492143|ref|YP_803878.1| ribonuclease BN-like family protein [Pediococcus pentosaceus ATCC
25745]
gi|116102293|gb|ABJ67436.1| Ribonuclease BN-like family enzyme [Pediococcus pentosaceus ATCC
25745]
Length = 300
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 59/278 (21%), Positives = 119/278 (42%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F + ++ F + + + ++ LLS FP ++ +L V T
Sbjct: 4 KVVFRKTKTFLSALLKRFNDSEVVNNSIVLAYYLLLSFFPMVMLMGSLLPLFDIK--VNT 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + P I + L L + S L Y +S V A + ++NRAY
Sbjct: 62 VLEYIETVVPVTIYNITEPIVKDFLGSGNGELLSFSLLLTIYSASQAVAAFQRTINRAYD 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ + R+++F ++ + I+ F+F ++Y+ +L +I +
Sbjct: 122 VAKHQNPIVNRIVAFVLTVIIIAIMGILVFLFSFGQTLISYLTPILNLPTHLFDLIGQLK 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T++ LF+GL ++ +P AK K ++PG I I ++ + F+ Y+ F+ T
Sbjct: 182 WPVTIVGLFVGLALLYYLVPNAKIKFKYVIPGSIAATIGTMIISQFFSFYLRIFARSVTS 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + + +L + + G LNA+ K
Sbjct: 242 YKTLGTFIAIMFWLNFSAMVVMFGGVLNATWQELREGK 279
>gi|317050136|ref|YP_004117784.1| ribonuclease BN [Pantoea sp. At-9b]
gi|316951753|gb|ADU71228.1| ribonuclease BN [Pantoea sp. At-9b]
Length = 289
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 101/281 (35%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F + E++ A +++ +LL++ P I L +
Sbjct: 6 LRHSGHAFFLWVKLLWRRIDEDNMTTQAGNLAYVSLLALVPLIAVVFALFAAFPVFSEIS 65
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + +F + I + Q +A K + + A++ + + ++ +LN
Sbjct: 66 VQLKNFIFTNFVPAAGNTIQRYLEQFVANVNK-MTAVGAVSLIVTALLLMHSVDSALNVI 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R + R + + + + L + + + + + + +I
Sbjct: 125 WRSDKKRPMVYSFAVYWMILTLGPLLAGASLAISSYLLSL------RWVSAAGVNSLIEQ 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L + ++ +P + L G + + + +G F Y+ F +Y
Sbjct: 179 VLRVFPLLLSILAFWLLYSIVPTRRVPGRDALVGAVVAGLLFELGKKGFALYVTMFPSYQ 238
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y +LGAE+ ++ Y K+
Sbjct: 239 LIYGVLAVIPILFLWVYWTWCIVLLGAEITVTLDDYRQLKQ 279
>gi|323486654|ref|ZP_08091975.1| YihY family protein [Clostridium symbiosum WAL-14163]
gi|323692200|ref|ZP_08106443.1| ribonuclease BN [Clostridium symbiosum WAL-14673]
gi|323400035|gb|EGA92412.1| YihY family protein [Clostridium symbiosum WAL-14163]
gi|323503774|gb|EGB19593.1| ribonuclease BN [Clostridium symbiosum WAL-14673]
Length = 273
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ FV+++ A+ S +LS FPFI+ + + ++ V+ +PE
Sbjct: 9 KKIYDEFVKDEITVYAAQASFFIVLSFFPFIMILLTVIQLVPTIS-QADLLLVISRLFPE 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + + + +++ + + +S G+ + LNR + R++ I+R
Sbjct: 68 KVYPLVESIVTDLYTTAPAAILSVTTIVTIWSASRGMMGIERGLNRIINCSKRRNYVISR 127
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI+ GY ++ + ++ + V + ++ P L ++ + + R + L +
Sbjct: 128 LINSGYTVVFILVCIMSLVLMVFGTSLQRLLLRYLPILEHIAPYLLSIRALIALAILIVF 187
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ FLP K ++ LPG +F+ W+V + F+ Y F +S MY LA+I+ +
Sbjct: 188 FMGLYTFLPFEKLELRKQLPGALFSTAGWIVCSYGFSIYFNHFKRFSYMYGSLAAIVILM 247
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKKP 281
++LY LGAE+N ++ +KP
Sbjct: 248 LWLYFCICILFLGAEVN---QHMHFGRKP 273
>gi|294851216|ref|ZP_06791889.1| yihY [Brucella sp. NVSL 07-0026]
gi|294819805|gb|EFG36804.1| yihY [Brucella sp. NVSL 07-0026]
Length = 286
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 183/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIVVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|169825899|ref|YP_001696057.1| transport protein [Lysinibacillus sphaericus C3-41]
gi|168990387|gb|ACA37927.1| possible transport protein [Lysinibacillus sphaericus C3-41]
Length = 305
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 123/272 (45%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ D I + A+++ ++ LLS FP ++F L +L V +
Sbjct: 34 FVQDLIGRVKRVEISALSAQLAYFFLLSFFPLLIFLVTLLPYLNLETT--QVYSFLVNVL 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + K I + + ++L L +I L + +S G+ AL +LN+AY E R+ +
Sbjct: 92 PDEVYKLIENTLNEILTNRNSSLLSIGVLGTIWSASKGINALIRALNKAYDT-EGRAGIL 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R +S + + V + + + V ++ + N R + +F
Sbjct: 151 DRGLSLVFTVALVVVMAVALLLPVFGQQIGHFLFSIVGIEEQFESVWHNLRWSIPPILIF 210
Query: 191 IGLIFVHLFLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
I L+ ++ F+P + KI+ + PG +F ++W+V F+ YI F+ YS Y + +
Sbjct: 211 IVLMGIYWFVPNTSPRLKILGVWPGAMFATLAWLVVTYAFSFYINNFANYSATYGSIGGV 270
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++LY G+ I G LNA+M +K+
Sbjct: 271 IILMLWLYFTGIILIFGGVLNATMQKRALQKE 302
>gi|75909614|ref|YP_323910.1| ribonuclease BN [Anabaena variabilis ATCC 29413]
gi|75703339|gb|ABA23015.1| Ribonuclease BN [Anabaena variabilis ATCC 29413]
Length = 299
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 98/282 (34%), Gaps = 11/282 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
++ + +A++ + ++ +A+ ++ + S+ P ++ +AG G ++
Sbjct: 3 LKAIWQLFQEALQEWNDDKASRLAAALAYYTVFSIAPLLIIVIAIAGAVFGEEAARGEIV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G A+ I I V IS ++ L+ SLN + V
Sbjct: 63 QQIQGLVGRDGAEFIETAIQNVDRPKTGTIASLISIALLLLGATGVFIELQDSLNTIWEV 122
Query: 123 VEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ R +SFG VL L++ + + + Y L + +
Sbjct: 123 QPKPGRGVKGIFRQRFLSFGMVLGIGFLLLVSLVISTVLSTLVNYFG---GLLPGVDFLW 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + LP + +L G I T I + +G L Y+ +
Sbjct: 180 QLVNFIISFAITTLLFALIFKVLPDVRITWNDVLVGAILTSILFSIGRFLLGQYLGN-AG 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y S++ L ++Y GAE Y R+
Sbjct: 239 FGSAYGAAGSVVLILAWVYYTAQILFFGAEFTQVYARKYGRR 280
>gi|21674148|ref|NP_662213.1| ribonuclease BN, putative [Chlorobium tepidum TLS]
gi|32699641|sp|Q8KCT5|Y1325_CHLTE RecName: Full=UPF0761 membrane protein CT1325
gi|21647308|gb|AAM72555.1| ribonuclease BN, putative [Chlorobium tepidum TLS]
Length = 422
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 9/267 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGA 69
HFV + A ++ LLS+ P + ++ + I D +F
Sbjct: 22 FFSFMWRHFVHDRVLMSAGSLAFQTLLSLVPLMAVTLSILKVFPVFASLKQYIGDFLFQN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + + + L T+ L + + +LN + V R
Sbjct: 82 FAPAQGSILKGYLWEFIDKTS-SLSTVGGLFLIVIVLFLISTIDQTLNDIWEVQTPRRRL 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L V + A +YV A G LL + Y +L
Sbjct: 141 QGFTLYWTVLTLGPVFIGTSVL-------ASSYVWYSVFAEGALLEMKARVLSYVPVLNS 193
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++ +P K + L G + + + + FT Y+ +F+T+ +Y L+ +
Sbjct: 194 VIAFFLLYMLVPNRKVRFTHALAGGVLAAVLFELAKRWFTFYVSSFATFEHIYGALSVVP 253
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
++Y+ V + GAE S+ +
Sbjct: 254 MLFFWIYLEWVVVLTGAEFVFSLGYFR 280
>gi|120610141|ref|YP_969819.1| putative ribonuclease BN [Acidovorax citrulli AAC00-1]
gi|120588605|gb|ABM32045.1| tRNA-processing RNAse BN [Acidovorax citrulli AAC00-1]
Length = 446
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT--VIDVVFGAWPEVI 74
E F E+ AS ++ + LL++ PF + + + T +V P+ I
Sbjct: 31 ERFREDRLGLTASSLTFTTLLALVPFFTVALAIFTAFPIFRTLQTGLQRWLVDSLVPDSI 90
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ + + Q A A GL + + + +LN +RV +R LI
Sbjct: 91 SRQVLGYLTQF-AAKASGLGVAGFSILLATALALILTIDRTLNNIWRVPRLRPLGQRVLI 149
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + ++ + + G L L L G
Sbjct: 150 YWAVITLGPLVLAASLALTTSVASSASR-----GLEGALPDSARLLFDSIEFLLLAGGTA 204
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + + G +F + V + YI + TYS +Y A++ LV+
Sbjct: 205 ALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGLYIASVPTYSVLYGAFATLPILLVW 264
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 265 IYVAWVIVLLGAVVAAYL 282
>gi|254700616|ref|ZP_05162444.1| YihY family protein [Brucella suis bv. 5 str. 513]
gi|261751125|ref|ZP_05994834.1| ribonuclease BN [Brucella suis bv. 5 str. 513]
gi|261740878|gb|EEY28804.1| ribonuclease BN [Brucella suis bv. 5 str. 513]
Length = 286
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 183/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAAPIANEVKSVLTVQHRGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|292572111|gb|ADE30026.1| Putative ribonuclease BN [Rickettsia prowazekii Rp22]
Length = 283
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 76/270 (28%), Positives = 135/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYSLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|304393249|ref|ZP_07375177.1| ribonuclease BN [Ahrensia sp. R2A130]
gi|303294256|gb|EFL88628.1| ribonuclease BN [Ahrensia sp. R2A130]
Length = 318
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 107/270 (39%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ A + D + ++ + LS+FP + + G + + + +
Sbjct: 23 SILKRAFKTISSTDMSLRCAGVAFYSFLSIFPVLACFVLVYGLVADGGKLQDQMASMEEF 82
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
PE + + + + +L+ P GL + A + S G AL +++R YR + R
Sbjct: 83 LPEAVQAVVYERLDALLSQPQVGLGIGLIVSFAVALWSGSRGTNALVATISRIYRETDDR 142
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + +S L A V L A+P+A+ + P + R
Sbjct: 143 GFLASAALSLSLTLGALVFLTASLLAIAAVPIAVNLL----PLPSWMETAALWVRWPLLA 198
Query: 187 LALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ ++ ++ + P +K I G + + W+ + LF+ Y+ F YS + L
Sbjct: 199 ILVYAAILILFRLAPDREDAKWRWISLGAAVSAVLWLALSSLFSFYVKEFGNYSATFGSL 258
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + ++++Y + LGA LNA +
Sbjct: 259 SVAVILMLWIYYSTMIVSLGAALNAEIEHQ 288
>gi|288927011|ref|ZP_06420905.1| YihY family protein [Prevotella buccae D17]
gi|288336220|gb|EFC74607.1| YihY family protein [Prevotella buccae D17]
Length = 446
Score = 131 bits (329), Expect = 1e-28, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 103/269 (38%), Gaps = 4/269 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +Y ++ F+ A +S S LL++ P + +A G ++
Sbjct: 27 RVAADLLRKVYLSLRFFIGRGHTDYAPSLSFSTLLAIVPVVAAVFAIAKGFGLAGYIEQW 86
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P+V+ I + + I L Y + + + + + ++V
Sbjct: 87 LHKALTSQPQVVDWIIQLSNSYLDHAKTGVVIGIGILVMLYSVMSLIYNIESAFDDIWQV 146
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RSW L + LA V L+++S + + + ++ + I
Sbjct: 147 KEKRSWNRVLLDYTSMLFLAPVVLILISGANIFVYGVVDSLQGYLLLGR----ITRLLIK 202
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ +++F+P + + S + I ++ + + + H + S+YS +Y
Sbjct: 203 VSPLVLTSAFFTLLYVFMPNTRVRFRSAVGPGILASVAMTLLQLFYVHSQLFLSSYSAIY 262
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
A++ +++L + + AEL +
Sbjct: 263 GSFAALPLFMLWLLISWYICLFCAELCYT 291
>gi|284041388|ref|YP_003391318.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283820681|gb|ADB42519.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 347
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 109/283 (38%), Gaps = 6/283 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
+ +F + ++ D+ F+++ +++ ++ + S+ P +V +LA FLG
Sbjct: 32 KGFFANAWIVLRDSFNGFLDDRCLKLSAALAYYTIFSLAPLLVLVMSLASIFLGEEAIQG 91
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + G AK I + I V + I +++ ++ S+N
Sbjct: 92 QIFGQINGLVGNDAAKQIQEMIKNVGLSGKTNTALIIGIGTLLLGATSLFVEIQDSVNLI 151
Query: 120 YRVVEMRSWYITRL---ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+RV +L L+ S+ +++ + V + + G + I
Sbjct: 152 WRVKAKPKQGWLKLIKDRLLSSSLIVSLGFLLLVSLVVNGIVLALSDQLTRFMPGLGVYI 211
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I + + I + LP AK + G IFT + +++G L YI T +
Sbjct: 212 ISAINFLVSTAVVTILFGVIFKVLPDAKIAWKDVRWGAIFTALLFMLGRYLIGLYIDTTA 271
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T S+ Y S++ L ++Y GAE + ++ K
Sbjct: 272 T-SSAYGAAGSLIVLLTWIYYTAAILYFGAEFTQAYANHFGIK 313
>gi|114762132|ref|ZP_01441600.1| Ribonuclease BN family protein [Pelagibaca bermudensis HTCC2601]
gi|114545156|gb|EAU48159.1| Ribonuclease BN family protein [Roseovarius sp. HTCC2601]
Length = 299
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 114/281 (40%), Gaps = 8/281 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++ + E + +++ ++ A LS+FP I + G+ +
Sbjct: 18 KLSLHDWLHALWGTWQRMDERNLGLISAGVAFYAFLSLFPAISAVIAIWGYWADPVAISE 77
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNR 118
++++ PE + +I Q+++ L IS + A + S + AL LN
Sbjct: 78 QMELLREMMPEQAYVLLETQITQLISANRSTLQWASIISIVVALWSSRASIAALIRGLNA 137
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ ++F +L T ++ V +P A+A++ ++ + +
Sbjct: 138 VSEAPHRENAIRRIAVAFLLTVLLVFTALVAFAAVVILPAAIAFI----GLPMHVEIAVS 193
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + +F + ++ + P + ++ PG + +SW G+V T Y+
Sbjct: 194 LVKWLILLAVVFFAIALLYRYGPNRRSRRMRWFTPGALLALLSWAAGSVALTIYMRNVDR 253
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +Y L +++ L++ Y+ + +LGA+LN + +
Sbjct: 254 LNEVYGSLGAVVALLLWFYVSALVTLLGAQLNGELDKRRKK 294
>gi|327485209|gb|AEA79616.1| Ribonuclease BN [Vibrio cholerae LMA3894-4]
Length = 297
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 90/275 (32%), Gaps = 6/275 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + + + + A +++ LLS+ P + ++
Sbjct: 8 IKQQARLGLNFFRYLLARMNHDRVNVNAGYLAYITLLSMVPMLTVLLSILSSFALFANAG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI A + L + + + + + +LN +
Sbjct: 68 EVIQDFVITHFVPAAGEVVKTALIEFVANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIW 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R + + + + L + + I L +
Sbjct: 128 RVQQKRRAVFSFSMYWMILTLGPILVGASIAATSYITSL------KILDNEALSGVYNLF 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + + ++L +P K + G + I + + F YI F +Y
Sbjct: 182 LRWLPFVLSYCAFVGLYLLVPNKKVHWQHAMLGALIAAILFELSKKGFAAYITQFPSYQL 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 242 IYGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 276
>gi|225853414|ref|YP_002733647.1| YihY family protein [Brucella melitensis ATCC 23457]
gi|256263106|ref|ZP_05465638.1| ribonuclease BN [Brucella melitensis bv. 2 str. 63/9]
gi|225641779|gb|ACO01693.1| YihY family protein [Brucella melitensis ATCC 23457]
gi|263093007|gb|EEZ17157.1| ribonuclease BN [Brucella melitensis bv. 2 str. 63/9]
gi|326409977|gb|ADZ67042.1| YihY family protein [Brucella melitensis M28]
gi|326539694|gb|ADZ87909.1| YihY family protein [Brucella melitensis M5-90]
Length = 286
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 126/280 (45%), Positives = 182/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+F WP IA PI +E+ VL V GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFDMWPSNIAVPIANEVKSVLTVQRHGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|331268878|ref|YP_004395370.1| ribonuclease BN [Clostridium botulinum BKT015925]
gi|329125428|gb|AEB75373.1| ribonuclease BN, putative [Clostridium botulinum BKT015925]
Length = 271
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/266 (22%), Positives = 130/266 (48%), Gaps = 2/266 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + + +++ +A+AS ++ S LLS FPF++F + + V+ +
Sbjct: 8 KTIFQLLYNLKKDEIFALASQLAYSLLLSFFPFLIFLFTITSYSTIQS--DRVLFTLKNI 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I +VL L + S + + +SNG +A+ +LN+AY E RS+
Sbjct: 66 IPESAYTLVYSIINEVLESKNVNLLSFSFIITIWIASNGFKAVIRALNKAYGEKEERSFI 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+L++ ++ + ++ F+ V + + KFF NL + R + ++ +
Sbjct: 126 KLQLMAIITTIILTFLIIFSLFLLVLGNIIGYKIMKFFSLPDNLFFVWNVFRYFLMLIFM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ ++ P K +LPG IF I W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 186 ILIFAVIYKLTPCRKLTFGEVLPGSIFATIGWIIVSLGFSFYVDNFANYSRLYGSIGAVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
+V+L++ + ++G E+NA ++
Sbjct: 246 ILMVWLFLTSIIILIGGEINALLLKR 271
>gi|227513933|ref|ZP_03943982.1| ribonuclease BN [Lactobacillus fermentum ATCC 14931]
gi|227087692|gb|EEI23004.1| ribonuclease BN [Lactobacillus fermentum ATCC 14931]
Length = 308
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + EHF A+ ++ LLS+FP ++ NL LG
Sbjct: 11 MKFIGTKLKRFVTVFAEHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLDA--K 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 69 TVLPYLQSAIPSSVYQFIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAY 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I R++SF ++++ + + + ++ L ++ N + + +
Sbjct: 129 GVAKNQNPIINRVLSFIWMIIVIMIIFALVIMYGLGEQVLEALQPILHFPINYVTLFSSL 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P A+ ++ ++ G + + W+ + LF++Y V F+
Sbjct: 189 RWPVTFGGLFIFLTLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLN 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + + + +++L G+ ++GA +NA+
Sbjct: 249 SYKTIGAFILMMMWLDFSGMIVMIGAIVNAT 279
>gi|89097332|ref|ZP_01170222.1| transporter [Bacillus sp. NRRL B-14911]
gi|89088155|gb|EAR67266.1| transporter [Bacillus sp. NRRL B-14911]
Length = 277
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/264 (23%), Positives = 117/264 (44%), Gaps = 3/264 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ E+D + +A+ ++ LLS+FP ++F L +L Q ++ + P
Sbjct: 14 YVWKKIHEDDIFGLAAQLAYFFLLSLFPLLIFLVTLITYLPVSQV--DILGFIRDYAPGD 71
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + Q+ + L ++ + + +SNG+ A+ + N AY V E R + R
Sbjct: 72 TMALIESNLNQIAD-RSGTLLSVGIIGTIWSASNGIHAIVKAFNLAYEVKESRPLIVARG 130
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ V+ + V ++ F L R +++ LFI
Sbjct: 131 MAILLTFAMIFVFVVALLLPVFGKQIGVFLFSAFDLSSEFLSAWNALRWLVSIVILFIVF 190
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ ++ P K K +S LPG IF W++ ++ F++Y+ F+ Y+ Y + +I+ +V
Sbjct: 191 LVLYWIAPNVKMKCISALPGAIFATAGWILASLAFSYYVGNFANYTAAYGSIGAIIVLMV 250
Query: 254 FLYMLGVFFILGAELNASMIIYYW 277
+ Y+ GV ILG E+NA +
Sbjct: 251 WFYLTGVIIILGGEVNAYVSKRKN 274
>gi|86133182|ref|ZP_01051764.1| ribonuclease BN-like family protein [Polaribacter sp. MED152]
gi|85820045|gb|EAQ41192.1| ribonuclease BN-like family protein [Polaribacter sp. MED152]
Length = 314
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 119/273 (43%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ + VE AS I+ S +++FPF++F L ++ ++ ++
Sbjct: 35 LYDVLEMYLIGIVEGALTTRASGIAYSFFMAIFPFLLFILTLIPYVPIDGAQEGLLSIIS 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I+ ++ GL + + + + +NGV A+ +Y V E+R+
Sbjct: 95 DVLPPKTFDAVDTVIIDIINNQYGGLLSFGFIGSIFLMTNGVNAIFGGFEFSYHVKEIRN 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I+ + L+I + + L L L + L+ I R +
Sbjct: 155 IFRAYFIAMFVSFVIVAFLLITVVIIIFFELILKDYVT-LAWLEDNLIWIQLVRGSIFLA 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+FI + ++ + PG +FT + V+ LF Y+ F+ Y+ +Y + +
Sbjct: 214 MIFITVSMLYHYGVKEGKYSRFFSPGAVFTTVLSVLSFYLFGFYVTEFAKYNELYGSIGT 273
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ ++F+++ + +LG ELNAS+ R K
Sbjct: 274 LLILMLFIWLNAIILLLGFELNASIYSLRVRNK 306
>gi|288800919|ref|ZP_06406376.1| YihY family protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332380|gb|EFC70861.1| YihY family protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 441
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 102/271 (37%), Gaps = 4/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R +F V +++ +I F + AS ++ S+LL+V P +A G +++
Sbjct: 27 LRYFFYNVIKVLFLSIRFFTTKRIMDYASALTYSSLLAVVPICAVVFAIARGFGYSKYIE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ P+V I ++ + I + + ++ N +
Sbjct: 87 VWFRGALDSQPQVAETIIGFVNSYLVHTKSGVFLGIGLIFMLWTIIMLTRKTELTFNDIW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R+ T + + + +V+ S + + I + + II
Sbjct: 147 NVKSERTIVRTFVDYIAMFFIIPIMIVLTSGISIYISTIADKAHAYTFLGSMMEGIIA-- 204
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ I I ++F+P KI S + I + + + ++ + + S+Y+
Sbjct: 205 --LMPYAIMSIVFILFYVFMPNTNVKIRSTIVPGILSGFAMQLLQYVYINSQIFLSSYNA 262
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A++ +++L + + GAEL +
Sbjct: 263 IYGSFAALPLFMLWLQLSWTICLFGAELCYT 293
>gi|323497005|ref|ZP_08102028.1| hypothetical protein VISI1226_16398 [Vibrio sinaloensis DSM 21326]
gi|323317849|gb|EGA70837.1| hypothetical protein VISI1226_16398 [Vibrio sinaloensis DSM 21326]
Length = 306
Score = 130 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 90/274 (32%), Gaps = 8/274 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT- 61
F + + A +++ LLS+ P + ++
Sbjct: 5 RIFKQSLIFGRYLLTRMGHDRVNVNAGYLAYITLLSIVPMLTVLLSVLSSFSIFADAGDA 64
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ D V + + +L+ ++ + + + + + +LN +R
Sbjct: 65 IQDFVITHFVPAAGDAVKGALLEFVSN-TGKMSAVGGAFLFVAALMLISNIDKNLNYIWR 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R + + + + L + + + + +
Sbjct: 124 VKNKRRAVFSFSMYWMVLTLGPILVGASIAATSYVTSL------RILESDAISGVYNLLL 177
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L F + ++L +P K + + G I I + F YI F +Y +
Sbjct: 178 RWLPFLLSFFAFVGLYLLVPNKKVYLSHAVVGAIVAAILFEASKKGFAAYITQFPSYQLI 237
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA+I V++Y+ + ++GAE+ A++
Sbjct: 238 YGALAAIPILFVWVYLCWLIVLVGAEVTAALGER 271
>gi|225872705|ref|YP_002754162.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
gi|225793213|gb|ACO33303.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
Length = 279
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 109/269 (40%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
F ++ A+ ++ ++L+VFP ++ L FL ++ +
Sbjct: 7 WRSRKFARSLWREFNDDRILDGAAVLAFFSVLAVFPAMILILALLPFLSIPHLQQAILQL 66
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P A+ I + L S + + +S+GV +L LN V +
Sbjct: 67 LHQVLPAQAARLFDGTIDYLSEHKRNALLVFSVIFTLWSASSGVFSLMEQLNLICDVTDR 126
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ +R + +L + ++ + + + ++ LL R
Sbjct: 127 RPFWKSRGTAILLMLFFYLVTILSLSLVIGLGALQDWLATMLGRNWLLLGFFATLRWIVL 186
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A + + F P A+ + + PG IF + + ++ F Y+ FS+YS MY L
Sbjct: 187 AAATLLAFAVAYRFGPDARIRFRFLSPGNIFAAVMVALISIGFRFYVGHFSSYSAMYGSL 246
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A+I+ +V++Y+ G+ + G E+++ +
Sbjct: 247 AAIIILMVWMYLAGIAVLTGWEIDSLLTR 275
>gi|296105424|ref|YP_003615570.1| ribonuclease BN [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059883|gb|ADF64621.1| ribonuclease BN [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 293
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 101/276 (36%), Gaps = 10/276 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ + E++ +A +++ +LLS+ P + L V +
Sbjct: 14 RPLRAWLKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSAFPMFAEVSLQLRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
VF + I + I Q +A +K + + A + + ++ +LN +R +
Sbjct: 74 FVFANFIPATGDVIQNYIEQFVANSSK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKK 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+R + + + + L + + + +L I N
Sbjct: 133 VRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNGAIDNVLRIF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ ++ ++ +P + + G + + + +G F YI F +Y +Y
Sbjct: 185 PLILSWLSFWLLYSVVPTTRVPNRDAVVGALVAAVLFELGKKGFALYITMFPSYQLIYGV 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I V++Y +LGAE+ ++ +Y KK
Sbjct: 245 LAVIPILFVWVYWTWCIVLLGAEITVTLGVYRELKK 280
>gi|163844000|ref|YP_001628404.1| YihY family protein [Brucella suis ATCC 23445]
gi|163674723|gb|ABY38834.1| YihY family protein [Brucella suis ATCC 23445]
Length = 286
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 127/280 (45%), Positives = 184/280 (65%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + I +D HF +DGWA ASHI+LS L+++FPF++F +LA FLG +F
Sbjct: 1 MQKIRRFLRQITFDVWGHFSTDDGWAFASHIALSGLMALFPFLIFATSLASFLGTREFAN 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T + V+FG WP IA PI +E+ VL V +GL T+S +AAAYF+SNGVEALRI+LNRAY
Sbjct: 61 TAVHVIFGMWPSNIAAPIANEVKSVLTVQRRGLLTVSVIAAAYFASNGVEALRIALNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RS RL S G+VL+ +++L+ +SF+ V PLA+ ++FP + I
Sbjct: 121 RVTDQRSIIFCRLQSLGFVLVGTLSLMAISFLLVLAPLAVRIAEQWFPDIAPFTGTIAFW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + L + L VH++LPA + + ILPG++ T I+W+ A F Y+ TF+ Y +
Sbjct: 181 RYTIAVAVLVLALFMVHIWLPAGRRGLGDILPGIVITLIAWLAAATAFAKYLETFANYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGLASIM +VFLYML FI+GAE+NA+++I+ R++
Sbjct: 241 TYAGLASIMVAIVFLYMLSAIFIVGAEINAAIMIFRKREQ 280
>gi|182680153|ref|YP_001834299.1| ribonuclease BN [Beijerinckia indica subsp. indica ATCC 9039]
gi|182636036|gb|ACB96810.1| ribonuclease BN [Beijerinckia indica subsp. indica ATCC 9039]
Length = 302
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 111/274 (40%), Positives = 162/274 (59%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + +A FVE+DGWA+ASHI+LSAL S+FPF++F LA FLG+ + +F
Sbjct: 17 ILSLFLEAFYRFVEDDGWAIASHIALSALTSMFPFLIFVTALAAFLGSQNLPEEAVTFLF 76
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP +A P+ EI VL GL T+S + A YFSS+GVEALRI+LNRAY V ++R
Sbjct: 77 NTWPAEVAGPLAQEIHNVLTQARGGLLTLSVVLAIYFSSSGVEALRIALNRAYDVKDVRP 136
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
WY+ RL S YV + + L+ + + V PL + +F P + L + R
Sbjct: 137 WYLLRLESIVYVFIGAFGLLTFALLIVLAPLIWEIILRFAPGMAPLQQYVTVLRFSIVTA 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLA 246
L + L+ +H +LPA + + I+ G++ T++ W+ G + F Y+ F+ Y T YAGLA
Sbjct: 197 ILLLALVIMHKYLPAGRRHLRDIIVGILLTFVLWIAGGMAFGSYLAEFARNYVTTYAGLA 256
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S+M LVF YML FI G ELNA+++ + RK+
Sbjct: 257 SVMIALVFFYMLACIFIYGGELNAAILRHSRRKQ 290
>gi|157373109|ref|YP_001481098.1| ribonuclease BN [Serratia proteamaculans 568]
gi|166918692|sp|A8GLI0|Y4878_SERP5 RecName: Full=UPF0761 membrane protein Spro_4878
gi|157324873|gb|ABV43970.1| putative ribonuclease BN [Serratia proteamaculans 568]
Length = 296
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWP 71
I+ + +A H++ +LLS+ P + L + + +F +
Sbjct: 21 RLLIKRVDSDGLTMLAGHLAYVSLLSLVPLVTVVFALFAAFPMFSDISVQLKSFIFSNFM 80
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + Q +A K + + + + ++ LN +R R +
Sbjct: 81 PAAGNVIQSYLEQFVANSNK-MTAVGTCGLIVTALLLISSVDSVLNTIWRSKNKRPIVFS 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + A + ++ ++ +I
Sbjct: 140 FAVYWMVLTLGPLLVGASMAISSYLLSL------NWLAQSGVNSLVDQVLRIFPLILSWI 193
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ +P + L G + + + +G F YI F +Y +Y LA I
Sbjct: 194 SFWLLYCIVPTVRVPPKDALIGALVAGVLFELGKKGFALYITMFPSYQLIYGVLAVIPIL 253
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y ++
Sbjct: 254 FLWVYWSWCIVLLGAEITVTIGEYRDYRQ 282
>gi|168185392|ref|ZP_02620027.1| ribonuclease BN [Clostridium botulinum C str. Eklund]
gi|169296339|gb|EDS78472.1| ribonuclease BN [Clostridium botulinum C str. Eklund]
Length = 271
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/263 (22%), Positives = 123/263 (46%), Gaps = 2/263 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
II+ + +++ +A+AS ++ S LLS FPF++F +A F +I +
Sbjct: 8 KIIFKLLYKLKKDEIFALASQLAYSLLLSFFPFLIFLFTVASFSSLQS--EGIIMTLKNI 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + + L + S + + +SNG +A+ +LN+AY E RS+
Sbjct: 66 IPDSAYNLVYSILNETFEASNVNLLSFSFIITIWIASNGFKAVIRALNKAYGEEEERSFI 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + ++ + ++ F+ V + + +L I R + ++ +
Sbjct: 126 KIQFMGIISTVILTFLIIFSLFILVLGNIIGLKIITMLSLPISLYFIWNVLRYFVMLIFM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I V+ P K +LPG IF I W++ ++ F+ Y+ F+ YS +Y + +++
Sbjct: 186 IIIFAIVYKITPCRKLTFKDVLPGAIFATIGWIIVSLGFSFYVDNFANYSRLYGSIGAVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
LV+L++ + ++G E+NA +
Sbjct: 246 VLLVWLFLSSIIILIGGEINAIL 268
>gi|312129376|ref|YP_003996716.1| ribonuclease bn [Leadbetterella byssophila DSM 17132]
gi|311905922|gb|ADQ16363.1| ribonuclease BN [Leadbetterella byssophila DSM 17132]
Length = 304
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 123/272 (45%), Gaps = 1/272 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+ + + + D A+ ++ S LL+VFP I+F L ++ ++D
Sbjct: 28 VYRFLQIIWNNIITFDLDQRATSVAFSFLLAVFPGILFLFTLIPYIPIDHLDIQIMDFSR 87
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
PE + + I ++++ P + + + Y ++NG+ +L + N A + R
Sbjct: 88 NLMPEGLYDVVAQTIYEIISRPRGDILSFGFFFSLYAATNGINSLTNAFNGALEKKKDRG 147
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYATM 186
+ +R + ++L LVI + +A + L Y+ + + + I +
Sbjct: 148 FMRSRGTAALVLVLLVTVLVISVVILIAGKIVLNYIARAGILDDQINIWGIRTLGYLSIF 207
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G+ ++ F PA KI G F+ + ++ LF++Y+ FS+Y+ +Y +
Sbjct: 208 FIFYFGIACLYYFAPAMDKKIRFFNFGAFFSSVLSILATNLFSYYLENFSSYNKLYGSIG 267
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ +V+ Y++ + ILG E+N + ++
Sbjct: 268 TLIAIMVWTYLICLILILGFEINVDLRAEKYK 299
>gi|15604356|ref|NP_220872.1| hypothetical protein RP496 [Rickettsia prowazekii str. Madrid E]
gi|3861048|emb|CAA14948.1| unknown [Rickettsia prowazekii]
Length = 285
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 76/272 (27%), Positives = 135/272 (49%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I
Sbjct: 2 IMRKILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFI 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 QIFLESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIK 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 SPPPYIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYS 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY
Sbjct: 182 LILILLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYG 241
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 SLGSIIVTLIFFYIINMIFIYGAEFNYLMKNY 273
>gi|186683817|ref|YP_001867013.1| ribonuclease BN [Nostoc punctiforme PCC 73102]
gi|186466269|gb|ACC82070.1| putative ribonuclease BN [Nostoc punctiforme PCC 73102]
Length = 299
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 58/278 (20%), Positives = 123/278 (44%), Gaps = 5/278 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
R ++ + + + +E +AS I+ +A+LS+FP I+ G L
Sbjct: 8 RFFYYLNWRTLKKTFARTMERRLLGLASEIAFNAMLSLFPAILAVLTAIGLLAESLQATF 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + PE I D ++ GLF++S + A + +S V +L++
Sbjct: 68 KQLAAQLSQILPEEALVLIRDFATTEITNSRNSGLFSLSFVLAIWTASGAVSTAMTALDQ 127
Query: 119 AYRVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+++ MR ++ +L+S G + + LV+ SF+ L V + +L LL +
Sbjct: 128 IHQIPSENMRPFWKAKLVSLGLTVGTMLLLVLASFLVFTSDWLLGMVVRENGSLIVLLHL 187
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + + + FV+ + P+ + ++PG I + W + + LF Y+ F
Sbjct: 188 WQLLRWPLALSIVAVAFGFVYRYGPSVWNSGTPMMPGAILAAVFWAILSALFRLYVANFG 247
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y+ +Y + +++ +++L M ++G +LN ++
Sbjct: 248 NYNKVYGAVGAVIVLMLWLSMSAAVLLIGDQLNVTVGE 285
>gi|92118944|ref|YP_578673.1| ribonuclease BN [Nitrobacter hamburgensis X14]
gi|91801838|gb|ABE64213.1| ribonuclease BN [Nitrobacter hamburgensis X14]
Length = 297
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 110/279 (39%), Positives = 174/279 (62%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ V+ + DA F+ +DGWA+ASHI+LSAL+++FPF++ +LAGFLG+
Sbjct: 2 RHIRYVYRVGTDAFYTFLADDGWAIASHIALSALMALFPFLIVLTSLAGFLGSKGLADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP+ +A ++ EI VL + T+ A+ A YF+SNGVE+LR++LNRAY V
Sbjct: 62 AELMIQIWPDQVANALSGEIHDVLTTTRRDALTVGAVLAVYFASNGVESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGR 181
+E R WY RL S GY L+A+VT + M+F+ V PL +A +++ P + ++ R
Sbjct: 122 IEPRRWYWLRLESIGYTLVAAVTALAMAFLIVLGPLIIAAAKRYIPLIVESNESLLNIAR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T++A+FI L+ +H +LPA + + I+PG+IFT ++ + + F Y+ F+ Y T
Sbjct: 182 YGITVIAMFIALVILHAWLPAGRRSFLQIIPGIIFTMLASLASGIGFGLYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I +
Sbjct: 242 MYAGLASVVIALVFLYFIAAIFVFGGELNAAIIKSRLPR 280
>gi|322835066|ref|YP_004215093.1| ribonuclease BN [Rahnella sp. Y9602]
gi|321170267|gb|ADW75966.1| ribonuclease BN [Rahnella sp. Y9602]
Length = 289
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 106/281 (37%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y ++ ++ ++ +A H++ +LLS+ P I +L +
Sbjct: 6 LSHYLKSLWKFTRLLLKRSDKDGLTLLAGHLAYVSLLSLVPLIAVVFSLFALFPVFSEIS 65
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + I + Q +A +K + + + + ++ LN+
Sbjct: 66 MQLKTFIFSNFMPATGNTIQRYLEQFVANSSK-MTAVGTCGLIVTALLLIASVDSVLNKI 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R + + + + L + LV V + + + + +I +
Sbjct: 125 WDSKTTRPIVFSFAVYWMVLTLGPILLVASVAVSSYLLSL------NWLNISGVHSVIDH 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L ++ ++ +P + L G + + + + + +FT YI F +Y
Sbjct: 179 ALRILPLLISWVTFWLLYQVVPTVRVPAKDALIGALVSGVLFELSKKIFTLYIQLFPSYQ 238
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y+ +LGAE+ ++ Y +K
Sbjct: 239 LIYGVLAVIPILFLWVYVSWCIVLLGAEITVTLGEYRSLRK 279
>gi|296157058|ref|ZP_06839895.1| ribonuclease BN [Burkholderia sp. Ch1-1]
gi|295892944|gb|EFG72725.1| ribonuclease BN [Burkholderia sp. Ch1-1]
Length = 444
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 105/269 (39%), Gaps = 5/269 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAWPEV 73
A F E+ AMA+ I+ A S+ P +V +AG+ GA + D + G +
Sbjct: 25 AFRQFAEDRCAAMAASIAFYAAFSLAPTLVMVIAVAGWVFGAEAARGELFDHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + + + G IS A +S +L +LN + RS +
Sbjct: 85 AAAGVQTIVENAHHNGSAGGIAAIISFSMLAIGASATFSSLNSALNIVWPYTGPRSSSVI 144
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + + +V K+ ++I ++ +L L
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVLDTIITFVGKWLWGDSPYVVIGNLLQLGVGLLVLA 204
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ + + G I + + G LF YI S+ + S+
Sbjct: 205 CAFAGLLKFLPDARVRWLDAFVGGIVAAVLFSAGKKLFALYIAHAGMASS-FGAAGSLAV 263
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY +LGAE +A+ + +
Sbjct: 264 LLMWLYFSAAVLLLGAEFSAARGRMHDPR 292
>gi|187919163|ref|YP_001888194.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
gi|187717601|gb|ACD18824.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
Length = 443
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 54/269 (20%), Positives = 105/269 (39%), Gaps = 5/269 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A + F E AMA+ I+ A S+ P +V +AG F GA + + + G +
Sbjct: 25 AFKQFAENRCAAMAASIAFYAAFSLAPTLVMVIAVAGWFFGAEAARGELFNHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + + + G IS + +S +L +LN + RS +
Sbjct: 85 AAAGVQTIVENAHHSGSAGGIAAVISLVTLVIGASATFSSLNSALNIVWPNTGPRSSSVI 144
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + + +V K+ ++I ++ +L L
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVLDTVITFVGKWLWGDSPYIVIGNLLQLGVGLLVLA 204
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ + G I + + G LF Y+ + +T + S+
Sbjct: 205 FAFAGLLKFLPDARVRWRDAFVGGIVAAVLFSAGKKLFALYLAH-AGMATSFGAAGSLAV 263
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY +LGAE +A+ + +
Sbjct: 264 LLMWLYFSAAVLLLGAEFSAARGRMHDPR 292
>gi|308188680|ref|YP_003932811.1| tRNA processing exoribonuclease BN [Pantoea vagans C9-1]
gi|308059190|gb|ADO11362.1| tRNA processing exoribonuclease BN [Pantoea vagans C9-1]
Length = 289
Score = 130 bits (327), Expect = 2e-28, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 91/279 (32%), Gaps = 6/279 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + + E+ A +++ +LL++ P I L +
Sbjct: 7 RPGLHAFWLWLKLLWKRIDEDGMTTQAGNLAYVSLLALVPLIAVVFALFAAFPVFSDISV 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A L+ + + A+ + + ++ +LN +R
Sbjct: 67 QLKQFVFNNLMPAAGNTLQRYLEQFVANVNRMTAVGAVGLIVTALLLMHSVDTALNTIWR 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + + + + L + + + + + ++
Sbjct: 127 SNKKRPMVYSFAVYWMILTLGPLLAGASLAISSYLLSL------RWINATGVTSLVDQML 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L ++ ++ +P + L G + + +G F Y+ F +Y +
Sbjct: 181 RIFPLLLSWLAFWLLYSIVPTQRVPPRDALIGALVAGALFELGKKGFALYVTMFPSYQLI 240
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I +++Y +LGAE+ ++ Y K+
Sbjct: 241 YGVLAVIPILFLWVYWTWCIVLLGAEITVALADYRQLKQ 279
>gi|240138821|ref|YP_002963296.1| putative ribonuclease RNAse BN [Methylobacterium extorquens AM1]
gi|240008793|gb|ACS40019.1| putative ribonuclease RNAse BN [Methylobacterium extorquens AM1]
Length = 300
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 105/277 (37%), Positives = 161/277 (58%), Gaps = 1/277 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 3 RFKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEAG 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 63 TLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIR 122
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 123 EARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRIG 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T + + L+ H F+ A + ++S+LPG++ T W + + F +Y+ FS Y++ Y
Sbjct: 183 VTAFLIALVLVIAHKFVAAGRRPVLSVLPGIVVTLCLWFLAGLGFGYYLDRFSNAYASTY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 243 GGLATAMIFLVFLYWLAAMFLFGGEINGTVIAARRQR 279
>gi|85709734|ref|ZP_01040799.1| hypothetical protein NAP1_12653 [Erythrobacter sp. NAP1]
gi|85688444|gb|EAQ28448.1| hypothetical protein NAP1_12653 [Erythrobacter sp. NAP1]
Length = 365
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 2/269 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+++ + + ++ G+ A +++ ++L++FPF + GA L G +++ V
Sbjct: 63 RIYETVRRTLVGTWQD-GFIHAGNLAYLSMLAIFPFFILGAALFELFGGRDLAVSMVQTV 121
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P AK I V+ L A A + S+ +E++R L RAY
Sbjct: 122 VAGLPPSAAKVIAPVAEDVVYARTGWLLWFGAAVALWTVSSLIESIRDILRRAYGTRARH 181
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYAT 185
S+ RL+S G +L A V L+ F V I A + + FP L L + R + A
Sbjct: 182 SFVRYRLLSAGIILGAVVVLMASLFAQVMIGTAQVVIMERFPQLLEALGTLRLSRVVPAA 241
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L + L+F L ++K+ PG +FT + W + + +F TY Y +
Sbjct: 242 GLMLSLYLLFYTLTPTEYRAKVYPKWPGALFTAVWWFGVTIALPPIMRSFFTYDLTYGSM 301
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A I+ L F +++G+ ++GAELNA++
Sbjct: 302 AGIIIALFFFWLVGLGLVIGAELNAALAE 330
>gi|83941959|ref|ZP_00954421.1| conserved hypothetical membrane protein [Sulfitobacter sp. EE-36]
gi|83847779|gb|EAP85654.1| conserved hypothetical membrane protein [Sulfitobacter sp. EE-36]
Length = 308
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 119/277 (42%), Gaps = 9/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ +D + A+ E++ +A+ ++ A+LS+FP + + + V ++
Sbjct: 10 KLYWDALKAALVDISEKNVSLIAAGVAFYAMLSLFPALAALVTILSLISDPVVVIAQLED 69
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTIS---ALAAAYFSSNGVEALRISLNRAYRV 122
+ G P+ + + D+++ ++ L L A + + GV A+ I LN Y
Sbjct: 70 MRGLLPDDVYDILNDQVVSLVTTSTGKLGWAGAASVLVAMWSARAGVGAMMIGLNSVYSE 129
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R+ L + + +I V P+ L+++ P + R
Sbjct: 130 -RNRNAARHYLRALMLTFTLVMVGLIALITVVIAPIVLSFI----PLGVFGYFVAEIIRW 184
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L L G+ ++ F P ++ +I + G +F SW V ++ F++Y+ F Y+ +
Sbjct: 185 SIAILVLLAGVGVLYRFGPNRRAARIGWLTWGAVFAVFSWAVVSIGFSYYVANFGNYNQV 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y + +++ LV+L++ ++GA NA + +
Sbjct: 245 YGSIGAVIAMLVWLWISSFLVLMGASWNAQVELRTRP 281
>gi|188588648|ref|YP_001922492.1| YihY family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188498929|gb|ACD52065.1| YihY family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 282
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 67/262 (25%), Positives = 127/262 (48%), Gaps = 2/262 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I +D +A+AS ++ LLS FPFI+F L GF +++ + PE +
Sbjct: 19 IVKVKNDDIFALASQLAYYLLLSFFPFIIFLITLIGFSNMDSI--QILNGIRAIVPEAVF 76
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I++V GL IS L A + SS+G A+ +N+AY E RS+ +IS
Sbjct: 77 DLTASIIVEVFDKQYTGLLGISILLALWTSSSGFRAVIKGVNKAYNFKEHRSFIKRLIIS 136
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
V+ ++T+++ + V + Y+ K P ++++ R ++ +
Sbjct: 137 MISVIALALTIILALSMLVFGNVIGNYIVKVIPFTNLVIILWNICRYAFVVIIMIFIFAS 196
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ F P+ + + ++PG IF+ + W+V + F+ YI F +S Y L ++ + +L
Sbjct: 197 IYRFTPSKRLRWREVIPGSIFSTLGWIVTSYGFSFYIDNFRNFSRFYGSLGAVFILMTWL 256
Query: 256 YMLGVFFILGAELNASMIIYYW 277
+++ + FILG E+N + +
Sbjct: 257 FLISILFILGVEINCVLEQFKK 278
>gi|254561424|ref|YP_003068519.1| ribonuclease RNAse BN [Methylobacterium extorquens DM4]
gi|254268702|emb|CAX24661.1| putative ribonuclease RNAse BN [Methylobacterium extorquens DM4]
Length = 300
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 105/277 (37%), Positives = 160/277 (57%), Gaps = 1/277 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F + D+ A + FV DGWA+ASHI+LS L S+FPF++ A LAG +G+
Sbjct: 3 RFKKILDVTGIAAQRFVAHDGWAIASHIALSMLTSLFPFLILLAALAGLIGSKSLADEAG 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F A P +AKPI E+ ++L G+ T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 63 TLIFDAVPREVAKPIVGEVHRLLTEQRGGVLTLGALLALYFSSSGVESLRVGLNRAYGIR 122
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R W++TRL S GYV+ ++ ++ + + V PL + P L L L + GRI
Sbjct: 123 EARPWWLTRLESIGYVVCGALAMLAFALLVVLGPLIWRQLVFVAPGLEPLALTVAIGRIG 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T + + L+ H F+ A + ++S LPG++ T W + + F +Y+ FS Y++ Y
Sbjct: 183 VTAFLIALVLVIAHKFVAAGRRPVLSALPGIVVTLCLWFLAGLGFGYYLDRFSNAYASTY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
GLA+ M LVFLY L F+ G E+N ++I ++
Sbjct: 243 GGLATAMIFLVFLYWLAAMFLFGGEINGTVIAARRQR 279
>gi|153833927|ref|ZP_01986594.1| tRNA-processing ribonuclease BN [Vibrio harveyi HY01]
gi|148869765|gb|EDL68742.1| tRNA-processing ribonuclease BN [Vibrio harveyi HY01]
Length = 299
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 90/266 (33%), Gaps = 8/266 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGA 69
++ + A +++ LLS+ P + ++ + V T+ +
Sbjct: 7 FFQYLLKRMTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFENVGETLQGYIIDN 66
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + ++ + + + + + +LN +RV + R
Sbjct: 67 FVPASGDAVRTALQEFVSN-TGKMTAVGGAFLFVAALMLISNIDKNLNYIWRVKDKRRPV 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + + L + +L
Sbjct: 126 FSFSMYWMVLTLGPILVGASIAATSYVTSL------KLIENETLSGAYNLFLRWLPLLLS 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + ++ +P K + G + + + F YI F +Y +Y LA+I
Sbjct: 180 FFAFMGLYFLVPNKKVYLSHGAIGAAIAAVLFELSKKGFAFYITQFPSYQLIYGALAAIP 239
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + ++GAE+ A++
Sbjct: 240 ILFVWVYLCWLIVLIGAEVTAALGER 265
>gi|227510013|ref|ZP_03940062.1| ribonuclease BN [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190508|gb|EEI70575.1| ribonuclease BN [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 299
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 55/279 (19%), Positives = 124/279 (44%), Gaps = 2/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + I + H+ + D A+ ++ +L+S+FP + G ++ H
Sbjct: 2 IKSIYLKTKQFIQTLVSHYSQGDVSDSAAVLAFYSLMSIFPILFIGGSILNLFHIH--TG 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ V +P+ I + I L +I + + +S + A + S+N+AY
Sbjct: 60 DIMEYVRPIFPDRIYVMLEPVIDSTLRSGGTSQLSIGLIVTIWSASRAIAAFQRSINKAY 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E ++ R++SF ++LL V +V + F +++ +++ +
Sbjct: 120 GVAEDQTAISNRILSFLWMLLLIVVVVAVMIAFALSQFVFSWLSPILHIPQSIISFVSTV 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +TM+ +++ L + +P AK K + G +FT + +V A F+ Y+ F+
Sbjct: 180 KWPSTMILVWLLLSVLFYIVPTAKVKFRYVWFGALFTTLGLMVLAQAFSIYVTFFAHRVD 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + + +L G+ +LG +NA++ K
Sbjct: 240 AYKTIGTFIVLMFWLDFSGLIMLLGGVINATIQELRMGK 278
>gi|254281948|ref|ZP_04956916.1| tRNA-processing ribonuclease BN [gamma proteobacterium NOR51-B]
gi|219678151|gb|EED34500.1| tRNA-processing ribonuclease BN [gamma proteobacterium NOR51-B]
Length = 411
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 105/268 (39%), Gaps = 8/268 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPE 72
+ ++ +A+ + +L ++ P + ++A + + D +
Sbjct: 17 YLAARYRDDRCSEIAAALVYMSLFALVPLLTVLFSVASAIPTFSGAENQIQDFLVEKLVP 76
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + D + + AK L + + + + +LN +R E R +
Sbjct: 77 ESSTEVADYLTDF-SSQAKNLTGVGIGILFVTAVLMLRNIERALNNIWRNSENRGAISSF 135
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+ + + +A V + ++ V + A + F ++L + +G
Sbjct: 136 LLYWAVLSMAPVMMGLVFGVHAFLFAAAKSLADF-----DVLGVSRLLLPLVPFSLSTLG 190
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L ++L +P ++ L G +F ++ V VLFT + S+Y+ +Y A++ L
Sbjct: 191 LSLLYLAVPNSQVPFKHALVGGVFAAGAFSVARVLFTTVMAN-SSYTLVYGAFAAVPLFL 249
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKK 280
++LY+ ++G + S+ Y ++
Sbjct: 250 LWLYVTWNIVLMGGIVVHSLSAYQSEEQ 277
>gi|260770762|ref|ZP_05879691.1| ribonuclease BN [Vibrio furnissii CIP 102972]
gi|260613999|gb|EEX39189.1| ribonuclease BN [Vibrio furnissii CIP 102972]
Length = 284
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 86/257 (33%), Gaps = 6/257 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
V + A +++ LLS+ P + ++ + V V+ A
Sbjct: 1 MVHDRVNVNAGYLAYITLLSLVPMLTVLLSILSSFSIFENVGDVVQDYVITHFVPAAGDA 60
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
L + + + + + + +LN +RV + R + + +
Sbjct: 61 VRHALSEFVTNTGKMTAVGGMFLFVAALTLISNIDKNLNYIWRVRKKRRMVFSFSMYWMI 120
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ L + + + I L +L F ++L
Sbjct: 121 LTLGPILVGASIALTSYITSL------KLLDSEALTGAFNFFLRRLPLLLSFFAFAGLYL 174
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+P K + + G + + + F YI F +Y +Y LA+I V++Y+
Sbjct: 175 LVPNKKVHFLHAIAGAFVAALLFELSKKAFAAYITQFPSYQLIYGALAAIPILFVWVYLC 234
Query: 259 GVFFILGAELNASMIIY 275
+ ++GAE+ A++
Sbjct: 235 WLIVLIGAEVTAALGER 251
>gi|157803755|ref|YP_001492304.1| hypothetical protein A1E_02895 [Rickettsia canadensis str. McKiel]
gi|157785018|gb|ABV73519.1| hypothetical protein A1E_02895 [Rickettsia canadensis str. McKiel]
Length = 275
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 135/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFHCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIKKRIQELLSAPPQSLMNLAIVGSVWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 PPYIRRRLLSIIQFLIISAVITFTMFLLVVIPIIFMKIPIILETIEKYKIILNVIRYSLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGSSSLYYILPNVKLNFVDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|255038759|ref|YP_003089380.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
gi|254951515|gb|ACT96215.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
Length = 310
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 51/263 (19%), Positives = 118/263 (44%), Gaps = 1/263 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++DII + + + + AS ++ S L+ FP I+F L ++ ++ ++
Sbjct: 30 LYDIILNLVASNRKHEIDQRASAVAYSLTLAAFPGIIFLFTLIPYIPIENLDQQILVLLR 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + IL +++ P G+ ++ + A S+NG+ +L S + Y E R
Sbjct: 90 NNMPQGTFEAADQTILDIVSRPRSGVLSLGFIFAMIASTNGMMSLMRSFDMVYDDKETRG 149
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYATM 186
+ R I+ LL L + + + ++ V + L+ ++ R +
Sbjct: 150 FLAIRGIATLLTLLLIAVLCLSVVLLIVGDAVMSIVGDWHIIRDNWLIALLNILRYLISF 209
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+L + + ++ F P+ + + G + + + F+ Y+ FS+Y+ +Y +
Sbjct: 210 GSLMLTISIIYRFAPSHGRQFTFVNAGSVIASVLILAATYGFSFYLSRFSSYNKLYGSIG 269
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
+++ ++++Y+L ILG E+N
Sbjct: 270 TMIALMIWIYLLAFVIILGFEIN 292
>gi|86747942|ref|YP_484438.1| ribonuclease BN [Rhodopseudomonas palustris HaA2]
gi|86570970|gb|ABD05527.1| Ribonuclease BN [Rhodopseudomonas palustris HaA2]
Length = 297
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 109/276 (39%), Positives = 163/276 (59%), Gaps = 2/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
V+ + DA F+ +DGWA+ASHI+LS+L+++FPF++ ++AGF G+ +
Sbjct: 4 IRYVYAVAMDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSVAGFFGSKDLADQAAE 63
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ WP +A ++ EI VL TI L A YF+SNGVE+LR++LNRAY V+E
Sbjct: 64 LMLQIWPAQVASTLSGEIHDVLTTTRGDALTIGLLLALYFASNGVESLRVALNRAYAVIE 123
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIY 183
MR WY+ RL S GY L+A+ T + M+F+ V PL LA R + P + + ++ R
Sbjct: 124 MRPWYMLRLESIGYTLVAAFTALAMAFLIVLGPLILATARHYVPLMVEDNQTLLTVARYG 183
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMY 242
T+ AL + L +H LPA + I+PG+ FT ++ + V F Y+ F+ Y TMY
Sbjct: 184 ITVGALILALFILHARLPAGHRTVKQIVPGIAFTVVASLASGVGFGLYLARFANNYVTMY 243
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
AGLAS++ LVFLY + F+ G ELNA++I
Sbjct: 244 AGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLP 279
>gi|315606247|ref|ZP_07881264.1| YihY family protein [Prevotella buccae ATCC 33574]
gi|315252069|gb|EFU32041.1| YihY family protein [Prevotella buccae ATCC 33574]
Length = 467
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/269 (15%), Positives = 103/269 (38%), Gaps = 4/269 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +Y ++ F+ A +S S LL++ P + +A G ++
Sbjct: 48 RVAADLLRKVYLSLRFFIGRGHTDYAPSLSFSTLLAIVPVVAAVFAIAKGFGLAGYIEQW 107
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P+V+ I + + I L Y + + + + + ++V
Sbjct: 108 LHKALTSQPQVVDWIIQLSNSYLDHAKTGVVIGIGILVMLYSVMSLIYNIESAFDDIWQV 167
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RSW L + LA V L+++S + + + ++ + I
Sbjct: 168 KEKRSWNRVLLDYTSMLFLAPVVLILISGANIFVYGVVDSLQGYLLLGR----ITRLLIK 223
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ +++F+P + + S + I ++ + + + H + S+YS +Y
Sbjct: 224 VSPLVLTSAFFTLLYVFMPNTRVRFRSAVGPGILAGVAMTLLQLFYVHSQLFLSSYSAIY 283
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
A++ +++L + + AEL +
Sbjct: 284 GSFAALPLFMLWLLISWYICLFCAELCYT 312
>gi|294669009|ref|ZP_06734095.1| YihY family protein [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291309001|gb|EFE50244.1| YihY family protein [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 421
Score = 130 bits (326), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 97/268 (36%), Gaps = 9/268 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDV 65
+F + F E D +++ ++ + LL++ P + + + + VI++
Sbjct: 14 RLFGFARFLYQRFNEVDVPQVSASLTFTTLLALVPVLTVALVILSAFPVFNDLSSSVIEL 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ G A + + A L I + + + + + NR +R +
Sbjct: 74 IDGYLVPKGADAVRGYLATFQNN-AGNLTAIGIVFLGVTAVMLIRTIDQTFNRIWRAQDR 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + L+ + + A + + + + L+ +
Sbjct: 133 RPLWTQFLVYWMLLTFAPLAIGAGL-------SVWELLLRHQAWANQDTLLSEVIKTVGG 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ L ++ +P L G T + + F Y+ TF++Y+ +Y
Sbjct: 186 LVMNAAALWLLYRVVPNRYVPARHALIGAALTAVLLDLAQRGFGWYVGTFNSYTLIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMI 273
A+I L++L +L + + GA L AS+
Sbjct: 246 AAIPVFLIWLNLLWMLLLTGAVLTASLS 273
>gi|206580597|ref|YP_002241248.1| tRNA-processing ribonuclease BN [Klebsiella pneumoniae 342]
gi|288937886|ref|YP_003441945.1| ribonuclease BN [Klebsiella variicola At-22]
gi|290513110|ref|ZP_06552473.1| tRNA-processing ribonuclease BN [Klebsiella sp. 1_1_55]
gi|226737449|sp|B5XZI5|Y5501_KLEP3 RecName: Full=UPF0761 membrane protein KPK_5501
gi|206569655|gb|ACI11431.1| tRNA-processing ribonuclease BN [Klebsiella pneumoniae 342]
gi|288892595|gb|ADC60913.1| ribonuclease BN [Klebsiella variicola At-22]
gi|289774492|gb|EFD82497.1| tRNA-processing ribonuclease BN [Klebsiella sp. 1_1_55]
Length = 286
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 96/275 (34%), Gaps = 10/275 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ + E+ +A +++ +LLS+ P I L V +
Sbjct: 14 RPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F + I I Q +A ++ + + A S + ++ +LN +R
Sbjct: 74 FIFANFIPATGDVIQGYIEQFVANSSR-MTAVGAFGLIVTSLLLMYSIDSALNTIWRSTR 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + + + L + + + +L +I N
Sbjct: 133 SRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLDGVIDNLLRLF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + ++ +P + + + G + + + G F YI TF +Y +Y
Sbjct: 185 PLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQLIYGV 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + V++Y +LGAE+ ++ Y K
Sbjct: 245 ISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|311281658|ref|YP_003943889.1| ribonuclease BN [Enterobacter cloacae SCF1]
gi|308750853|gb|ADO50605.1| ribonuclease BN [Enterobacter cloacae SCF1]
Length = 290
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 10/280 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ Y + + E+ +A +++ +LLS+ P + L V
Sbjct: 9 IKHYTLPLVAWLKLLWRRIDEDQMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVS 68
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
T+ VF + I I Q +A +K + + A + + A+ +LN
Sbjct: 69 ATLRHFVFTNFMPATGDVIQRYIEQFVANSSK-MTAVGACGLIVTALLLMHAIDSALNTI 127
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R R + + + + L + + + L +I N
Sbjct: 128 WRSHRTRPHVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASELNGVIDN 179
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L +I ++ +P + + G F + +G F YI F +Y
Sbjct: 180 TLRIFPLLLSWISFWLLYSVVPTTRVPNRDAVIGAFFAAALFELGKKGFALYITMFPSYQ 239
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y +A + V++Y +LGAE+ ++ Y K
Sbjct: 240 LIYGVIAVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|85060204|ref|YP_455906.1| ribonuclease BN [Sodalis glossinidius str. 'morsitans']
gi|84780724|dbj|BAE75501.1| ribonuclease BN [Sodalis glossinidius str. 'morsitans']
Length = 304
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 94/277 (33%), Gaps = 8/277 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R + V I + +D +A H++ +LLS+ P + L V
Sbjct: 4 LRLHKLPVLHFIQHLGKRVYRDDITVLAGHLAYVSLLSLVPLVTVIFALFAAFPVFSDVS 63
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + I + Q + ++ + + + + ++ LN
Sbjct: 64 VELRHFIFTNFMPATGDVIQLYLEQFILNSSR-MTAVGTCGLIVTALLLIYSVDTVLNSI 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R R + + + + L + + + + + + I+
Sbjct: 123 WRSKNKRPIIFSFAVYWMVLTLGPLLVGASMVLSSYLFSLT------WLNVSGAKGIVTL 176
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L ++ +P + L G + + +G F Y+ F +Y
Sbjct: 177 LLRIFPLLLSCASFWLLYSLVPTVRVPARDALVGALVAGALFELGKKGFGLYVTLFPSYQ 236
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y LA I +++Y +LGAE+ AS+ +
Sbjct: 237 LIYGVLAVIPILFLWVYWSWCIVLLGAEITASLSEHR 273
>gi|261342955|ref|ZP_05970813.1| hypothetical protein ENTCAN_09555 [Enterobacter cancerogenus ATCC
35316]
gi|288314704|gb|EFC53642.1| tRNA-processing ribonuclease BN (RNase BN) [Enterobacter
cancerogenus ATCC 35316]
Length = 293
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 102/276 (36%), Gaps = 10/276 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ + E++ +A +++ +LLS+ P + L V +
Sbjct: 14 RPLRAWLKLLWHRIDEDNMTTLAGNLAYVSLLSLVPLVAVIFALFSAFPMFSDVSLQLRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
VF + I + I Q +A +K + + A + + ++ +LN +R +
Sbjct: 74 FVFANFIPATGDVIQNYIEQFVANSSK-MTAVGACGLIVTALLLMYSIDSALNAIWRSKK 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+R + + + + L + + + +L +I N
Sbjct: 133 VRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNVLRIF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ ++ ++ +P + + G + + + +G F YI F +Y +Y
Sbjct: 185 PLILSWLSFWLLYSVVPTTRVPNRDAVVGALVAAVLFELGKKGFALYITMFPSYQLIYGV 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I V++Y +LGAE+ ++ +Y K+
Sbjct: 245 LAVIPILFVWVYWTWCIVLLGAEITVTLGVYRELKQ 280
>gi|260587882|ref|ZP_05853795.1| YihY family protein [Blautia hansenii DSM 20583]
gi|331083883|ref|ZP_08332992.1| hypothetical protein HMPREF0992_01916 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542147|gb|EEX22716.1| YihY family protein [Blautia hansenii DSM 20583]
gi|330403308|gb|EGG82868.1| hypothetical protein HMPREF0992_01916 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 303
Score = 129 bits (325), Expect = 3e-28, Method: Composition-based stats.
Identities = 57/264 (21%), Positives = 122/264 (46%), Gaps = 3/264 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I+ E A A+ + +LS PF++ + + V+
Sbjct: 3 KRFLGATKEFIKSMNERHVTAYAAQAAYFIILSFIPFMLVLMTSVKYTPLTKA--EVVHA 60
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE I + +V + G+ +SA+ A + + G++AL N Y+V E
Sbjct: 61 LLQVCPENFETFIQSIVNEVYE-KSLGVVPVSAVIAMWSAGKGIQALTRGFNSIYQVKET 119
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++ ++R+ + Y L+ +++++ + V + FP + ++ +I + R+ T
Sbjct: 120 RNFLMSRIRAVFYTLVFVISIILTLTLQVFGNSLQRELSSHFPFMEKIVTMIISMRVVIT 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ AL + + ++ F+P K+ S PG + + W + F+ YI ++ + MY +
Sbjct: 180 LSALCVVFLMMYKFIPNRKATFRSQFPGALLCAVCWSAFSFGFSLYIDFYNGAANMYGSM 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELN 269
+I+ L++LY +F +LGA++N
Sbjct: 240 TTIVLVLLWLYFCMMFVMLGAQVN 263
>gi|120597103|ref|YP_961677.1| ribonuclease BN [Shewanella sp. W3-18-1]
gi|146291525|ref|YP_001181949.1| ribonuclease BN [Shewanella putrefaciens CN-32]
gi|166199585|sp|A4Y2G7|Y418_SHEPC RecName: Full=UPF0761 membrane protein Sputcn32_0418
gi|166199587|sp|A1REM8|Y272_SHESW RecName: Full=UPF0761 membrane protein Sputw3181_0272
gi|120557196|gb|ABM23123.1| tRNA-processing RNAse BN [Shewanella sp. W3-18-1]
gi|145563215|gb|ABP74150.1| tRNA-processing RNAse BN [Shewanella putrefaciens CN-32]
Length = 294
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 104/276 (37%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWRFLQHLRLRLVEDQINIRAGHLAYVTLLSLVPLVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEAFVYENFLPAAGDTVQIYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + ++
Sbjct: 129 WRTKEKRSVVVAFSMYWMVITLGPVLVGASLVATSYVVSL------KLFEDDTFSGVVPL 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G + + + +G F Y+ F +Y
Sbjct: 183 FIERLPMLFSVAAFLLLYMVVPNQKVKFLHALLGALVAALLFELGKKAFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|261879980|ref|ZP_06006407.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
gi|270333342|gb|EFA44128.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
Length = 442
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 96/266 (36%), Gaps = 3/266 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +Y + E+ W A+ ++ + ++++ P + G ++
Sbjct: 30 RPLVYMAQRLYMVFKGLFVENHWGYAAQLTFNTMMAIVPVFAIIFAVGRGFGFEDYIAEW 89
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ VF + P V + + + +S + Y + + N + V
Sbjct: 90 VHRVFASQPVVGKAVLELASSYINYTHTGVVIGVSLVFMLYSVISLFNNVEGVFNGIWAV 149
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ R W + L + ++++S + V L + F II
Sbjct: 150 TKERDWGRAAFDYISVIFLVPLAIILLSGLSVFFNSILGRLPDFQVLTPVFKGIISFA-- 207
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L + ++ F+P K ++ + + + + + +Y V F++YS +Y
Sbjct: 208 -VPLTVLTLFFTLLYTFVPNTKVRVSMVWFPAMLAGLCIIGLQTAYVYYQVMFTSYSIIY 266
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
LA++ ++++ + I AEL
Sbjct: 267 GSLAALPLLMLWMQLSWFICIGFAEL 292
>gi|299783492|gb|ADJ41490.1| Ribonuclease BN [Lactobacillus fermentum CECT 5716]
Length = 298
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + EHF A+ ++ LLS+FP ++ NL LG
Sbjct: 1 MKFIGTKLKRFVTVFAEHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLDA--K 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 59 TVLPYLQSAIPSSVYQFIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I R++SF ++++ + + + ++ L ++ N + + +
Sbjct: 119 GVAKNQNPIINRVLSFIWMIIVIMIIFALVIMYGLGEQVLEALQPILHFPINYVTLFSSL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P A+ ++ ++ G + + W+ + LF++Y V F+
Sbjct: 179 RWPVTFGGLFIFLTLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLN 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + + + +++L G+ ++GA +NA+
Sbjct: 239 SYKTIGAFILMMMWLDFSGMIVMIGAIVNAT 269
>gi|319424695|gb|ADV52769.1| ribonuclease BN [Shewanella putrefaciens 200]
Length = 294
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 104/276 (37%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F ++ + VE+ A H++ LLS+ P + ++ + +
Sbjct: 10 IRVLFLGIWRFLQHLRLRLVEDQINIRAGHLAYVTLLSLVPLVAVTMSMLSAFPVFKGIR 69
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V+ + + I + + +KG + A + + A+ SLN
Sbjct: 70 GQIEAFVYENFLPAAGDTVQIYINEFVGNASKG-TAVGIAALVVVAIMLISAIDKSLNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R E RS + + + + L V + + ++
Sbjct: 129 WRTKEKRSVVVAFSMYWMVITLGPVLVGASLVATSYVVSL------KLFEDETFSGVVPL 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
ML + +++ +P K K + L G + + + +G F Y+ F +Y
Sbjct: 183 FIERLPMLFSVAAFLLLYMVVPNQKVKFLHALLGALVAALLFELGKKAFALYVTQFPSYE 242
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y LA+I V++Y+ + +LGAE+ A+M Y
Sbjct: 243 AIYGALATIPILFVWVYLSWMIVLLGAEITAAMPEY 278
>gi|184155905|ref|YP_001844245.1| hypothetical protein LAF_1429 [Lactobacillus fermentum IFO 3956]
gi|183227249|dbj|BAG27765.1| conserved hypothetical protein [Lactobacillus fermentum IFO 3956]
Length = 308
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + EHF A+ ++ LLS+FP ++ NL LG
Sbjct: 11 MKFIGTKLKSFVTVFAEHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLDA--K 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 69 TVLPYLQSAIPSSVYQFIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAY 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I R++SF ++++ + + + ++ L ++ N + + +
Sbjct: 129 GVAKNQNPIINRVLSFIWMIIVIMIIFALVIMYGLGEQVLEALQPILHFPINYVTLFSSL 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P A+ ++ ++ G + + W+ + LF++Y V F+
Sbjct: 189 RWPVTFGGLFIFLTLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLN 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + + + +++L G+ ++GA +NA+
Sbjct: 249 SYKTIGAFILMMMWLDFSGMIVMIGAIVNAT 279
>gi|302876247|ref|YP_003844880.1| ribonuclease BN [Clostridium cellulovorans 743B]
gi|307686979|ref|ZP_07629425.1| ribonuclease BN [Clostridium cellulovorans 743B]
gi|302579104|gb|ADL53116.1| ribonuclease BN [Clostridium cellulovorans 743B]
Length = 286
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 69/280 (24%), Positives = 126/280 (45%), Gaps = 2/280 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + I A++ + E+ ++ASHISL+ LLS FP +VF LAG+
Sbjct: 5 IKNFIKNSIHYIILAVKRYNEDAADSLASHISLNLLLSFFPIMVFLLTLAGYSPIEG--D 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI ++ P + + I QVL L ++S L Y +S G +A+ + LN AY
Sbjct: 63 QVIALILDFIPTEAHTLMKNTIYQVLDHKNPTLLSLSLLTTMYGASRGFKAILLGLNIAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E R + + L++ + + ++ + V ++ N +I
Sbjct: 123 DVDENRGFIVRNLLAIFFTFAIVLLVIGSLLLLVLGQTIWDFIENMLDLPDNFFIIWTFI 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++I ++ A K ++ G +FT ISW V + F+ Y+ F Y+
Sbjct: 183 RYAGMFSIMYITFAILYAKSSAIKLPFKTVRYGTLFTTISWFVVSYGFSFYVDNFGNYAN 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y G+A + +++L ++ + G ELNA++ K+
Sbjct: 243 IYGGIAGLFIMILWLNLMSSVILFGGELNAAIYYKNPGKR 282
>gi|88803358|ref|ZP_01118884.1| Ribonuclease BN [Polaribacter irgensii 23-P]
gi|88780924|gb|EAR12103.1| Ribonuclease BN [Polaribacter irgensii 23-P]
Length = 313
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 122/273 (44%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++DI+ VE A I+ S +++FPF++F L FL ++ ++
Sbjct: 35 LYDILEMYFIGIVEGALSTRAGGIAYSFFMAIFPFLLFVLTLIPFLPIEGAQEGLLSIIS 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + +L ++ GL + + + + SNGV A+ +Y + E R+
Sbjct: 95 DVLPPKTFDAVHAVLLDIIKNQYGGLLSFGFIGSIFLMSNGVNAIFGGFEYSYHIKEARN 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I+ ++ + +++ + + L L + L + L+ + GR ++
Sbjct: 155 IFKAYFIAMLVSVVIVIFVIVAITLIIFFDLFLLDMVS-LGWLNDNLIWLQLGRGLIFLI 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + + ++ + + PG +FT I ++ LF +Y+ F+ Y+ +Y + +
Sbjct: 214 MLHLTVSMLYHYGVKEGKQSGFFSPGAVFTTILSILTFYLFGYYVTEFAKYNELYGSIGT 273
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ ++F+++ + +LG ELNA++ R K
Sbjct: 274 LLILMLFIWLNAIILLLGFELNAAIYALRGRNK 306
>gi|260662842|ref|ZP_05863736.1| ribonuclease BN [Lactobacillus fermentum 28-3-CHN]
gi|260552923|gb|EEX25922.1| ribonuclease BN [Lactobacillus fermentum 28-3-CHN]
Length = 299
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 128/271 (47%), Gaps = 2/271 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + EHF A+ ++ LLS+FP ++ NL LG
Sbjct: 2 MKFIDTKLKRFVTVFAEHFQMAQVTTSAAVLAYYTLLSIFPAVLVVGNLLPMLGLDA--K 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + + I I L + G+ T AL A + +S G+ A + S+N AY
Sbjct: 60 TVLPYLQSAIPSSVYQFIRPIIFDFLRRGSGGILTTGALVALWSTSQGIAAFQRSVNGAY 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ I R++SF ++++ + + + ++ L ++ N + + +
Sbjct: 120 GVAKNQNPIINRVLSFIWMIIVIMIIFALVIMYGLGEQVLEALQPILHFPINYVTLFSSL 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R T LFI L ++ F+P A+ ++ ++ G + + W+ + LF++Y V F+
Sbjct: 180 RWPVTFGGLFIFLTLLYYFVPNARVRLRYVVIGALVATLLWMGLSRLFSYYAVVFAQRLN 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + + + +++L G+ ++GA +NA+
Sbjct: 240 SYKTIGAFILMMMWLDFSGMIVMIGAIVNAT 270
>gi|257069185|ref|YP_003155440.1| hypothetical protein Bfae_20430 [Brachybacterium faecium DSM 4810]
gi|256560003|gb|ACU85850.1| predicted membrane protein [Brachybacterium faecium DSM 4810]
Length = 388
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 99/284 (34%), Gaps = 20/284 (7%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AHQFVPTVIDVV 66
+ F+ + G A+ ++ +LS+ P ++ +LA L + I+
Sbjct: 29 KRVLSEFLRDGGTDQAAKLTYFMVLSIAPTLLALFSLATLLLAGIKDQIADLLVDAINSA 88
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
G + + ++ G I A + +S ++A N Y V E
Sbjct: 89 AGGSGLGAEDAVRSTVNSLMGSSTGGTVALIIGIATALWSASAYIKAYGRVANHIYEVPE 148
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALGNL 173
R L + ++++ + + + + +
Sbjct: 149 GRGPIRMNGTMLLLTLAMILGILLVMISLLLSESIVEGLLGPIASSIGAEGALSFLMSSF 208
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L I + +L F L ++ P + I PG +F + V AV + Y+
Sbjct: 209 LPIWAWVKWPVILLIAFALLSLLYWGAPNIEKPFRFISPGGVFAILGIAVAAVALSIYMG 268
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
T + YS+ Y + IM L L+++ + I+GAE++A
Sbjct: 269 TVAGYSS-YGAIGGIMAVLFALWVVNIVIIMGAEVDAEYERARE 311
>gi|281180947|dbj|BAI57277.1| tRNA processing exoribonuclease BN [Escherichia coli SE15]
Length = 290
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + + E++ +A +++ +LLS+ P + L V
Sbjct: 10 RHRTRPLWAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSI 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + I I Q +A K + + A + + ++ +LN +
Sbjct: 70 QLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R + + + + L + + + +L +I N
Sbjct: 129 RSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNV 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L +I ++ +P + + G + + G F YI F +Y
Sbjct: 181 LRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQL 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LA I V++Y +LGAE+ ++ Y K
Sbjct: 241 IYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|262038469|ref|ZP_06011843.1| putative ribonuclease BN [Leptotrichia goodfellowii F0264]
gi|261747564|gb|EEY35029.1| putative ribonuclease BN [Leptotrichia goodfellowii F0264]
Length = 433
Score = 129 bits (325), Expect = 4e-28, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 98/273 (35%), Gaps = 6/273 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++++ F +I ++ + + +A ++ ++++VFP + + G + V
Sbjct: 19 IKKHIREAFQMINLIYRNYSDGETQILACTLTYFSMIAVFPILALVLGITKGFGLDKLVI 78
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + ++ + + + L + + + + L + N+ +
Sbjct: 79 HKIFELVPQNEGMVRTVLDIANKLLASTQGGILTGVGVVILINSAIKVLMMLEDAFNKIW 138
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + RS + + L + ++++ + V K L +I+
Sbjct: 139 HISKNRSMTRRIVDYVAIIFLGPILIIVIVATNSFV------VEKMSTMLFGGTVIVNIF 192
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L + +P K+ I T + V V FT + + Y+
Sbjct: 193 LHVFGPLFYVFLFTLLFYVIPNTNVKLKPAFISGIITVLLCYVLKVAFTWLQSSITKYNA 252
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y LA + L ++ + V +LGA++ S+
Sbjct: 253 IYGSLALVPIFLTWVQYMWVTILLGAQIAFSIQ 285
>gi|157691522|ref|YP_001485984.1| hypothetical protein BPUM_0738 [Bacillus pumilus SAFR-032]
gi|157680280|gb|ABV61424.1| hypothetical protein BPUM_0738 [Bacillus pumilus SAFR-032]
Length = 272
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 80/266 (30%), Positives = 128/266 (48%), Gaps = 2/266 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I IE F+ +G A ++ ++ LLS+FPF++F L G+L V+ V+ G
Sbjct: 3 FIKALIERFLLHEGPAKSAELAYFFLLSLFPFLIFVLTLVGYLPLTS--KDVLSVISGYA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE I Q L GL + +AA + +SNG+ A+ + N AY V E RS+ +
Sbjct: 61 PEGALSMIESIAEQTLNNRNGGLLSFGIIAALWSASNGINAVVRAFNHAYEVEENRSFIL 120
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S + +T++ + V +V K L I R + L L
Sbjct: 121 VRLTSIILTIAMVLTIIFALMLPVFGKELGLFVAKLVGQSDAFLTIWTAMRWIISPLILL 180
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
I ++ F P + K+ +LPG IF I W++ ++LF+ Y+ F+ YS MY + I+
Sbjct: 181 IVFTSLYYFAPNMRLKLKFVLPGAIFASIGWILVSMLFSFYVGEFANYSAMYGSIGGIII 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYY 276
+++ Y+ G+ ILG ELNA +
Sbjct: 241 LMIWFYLTGIMIILGGELNALLHKRK 266
>gi|259906715|ref|YP_002647071.1| ribonuclease BN [Erwinia pyrifoliae Ep1/96]
gi|224962337|emb|CAX53792.1| tRNA-processing ribonuclease BN [Erwinia pyrifoliae Ep1/96]
gi|283476498|emb|CAY72313.1| tRNA processing exoribonuclease BN [Erwinia pyrifoliae DSM 12163]
gi|310765938|gb|ADP10888.1| Ribonuclease BN [Erwinia sp. Ejp617]
Length = 290
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 44/279 (15%), Positives = 99/279 (35%), Gaps = 8/279 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
I + E+ +A H++ +LLS+ P I L V
Sbjct: 9 HRLRAFCAWIKLLCQRIDEDAMTVLAGHLAYVSLLSLVPLIAVVFALFSAFPMFSDVSVQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + V + + + + Q +A +K + + + + ++ +LN +R
Sbjct: 69 LKNFVINNFVPAAGTTVQNYLEQFVANVSK-MTAVGVGGLVVTALLLMYSIDSALNTIWR 127
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RS + + + + L + + + + +G + ++
Sbjct: 128 SKVKRSLVYSLAVYWMILTLGPLLAGASLAISSYLLSL------HWATIGGVSGLVDIVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + ++ +P L G I + + +G F YI F +Y +
Sbjct: 182 RIFPLLLSCLSFWLLYSLVPTTPVAGRDALVGAIVGGVLFELGKKGFALYITLFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA++ +++Y +LGAE+ A++ Y K+
Sbjct: 242 YGVLAAVPILFIWIYWTWCIVLLGAEITATLADYRRLKQ 280
>gi|85375509|ref|YP_459571.1| hypothetical protein ELI_13410 [Erythrobacter litoralis HTCC2594]
gi|84788592|gb|ABC64774.1| conserved hypothetical membrane protein [Erythrobacter litoralis
HTCC2594]
Length = 339
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 2/266 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+++ + DG+ A +++ A+L++FPF + GA + +G I+ V
Sbjct: 42 WEVTKRVLVG-AYNDGFIHAGNLAYMAVLAIFPFFITGAAIFSVIGEESDRAATINAVLL 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A P +A I +V+ + L + + S+ +E +R L RAY + ++
Sbjct: 101 ALPPSVANTIGPVAREVIEARSGWLLWVGGAVGLWTVSSLIETIRDILRRAYGTEAVLAF 160
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ RL+S G ++ A V L++ V I A +++ + P L ++L + RI +
Sbjct: 161 WRYRLLSTGIIIAAVVLLMLSLIAQVMIGAAQEFIQAYVPQLIDMLGELQISRIIPAIGL 220
Query: 189 LFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ P +S+ PG + T + WV V + F Y Y L+
Sbjct: 221 FGSIYFLFYALTPHVYRSRRYPKWPGALATTVWWVGVTVALPPILRNFFAYDLTYGALSG 280
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
IM L F +++G+ ++GAELNA++
Sbjct: 281 IMIALFFFWLVGLGVVIGAELNAALA 306
>gi|67459119|ref|YP_246743.1| ribonuclease BN, putative [Rickettsia felis URRWXCal2]
gi|67004652|gb|AAY61578.1| Ribonuclease BN, putative [Rickettsia felis URRWXCal2]
Length = 275
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 80/270 (29%), Positives = 136/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYSLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|307727222|ref|YP_003910435.1| ribonuclease BN [Burkholderia sp. CCGE1003]
gi|307587747|gb|ADN61144.1| ribonuclease BN [Burkholderia sp. CCGE1003]
Length = 443
Score = 129 bits (324), Expect = 4e-28, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 104/269 (38%), Gaps = 5/269 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A++ F E AMA+ I+ A S+ P +V +AG F GA + D + G +
Sbjct: 25 ALKQFSENRCTAMAASIAFYAAFSLAPTLVMVIAVAGWFFGAEAARGELFDHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + + + G IS A +S +L +LN + R+ +
Sbjct: 85 AAAGVQTIVENAHHSGSAGGVAAIISFTMLAIGASATFSSLNSALNVVWPYTGPRTSSVI 144
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + + ++ K+ ++I ++ +L L
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVLDTVITFIGKWLWGDSPYVVIGNLLQLGVGLLVLA 204
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP AK + L G + + G LF Y+ S+ + S+
Sbjct: 205 FAFAGLLKFLPDAKVRWRDALVGGAVAAVLFSAGKKLFALYLAHAGMASS-FGAAGSLAV 263
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY +LGAE +A+ +
Sbjct: 264 LLMWLYFSAAVLLLGAEFSAARGRLNDPR 292
>gi|239814676|ref|YP_002943586.1| ribonuclease BN [Variovorax paradoxus S110]
gi|239801253|gb|ACS18320.1| ribonuclease BN [Variovorax paradoxus S110]
Length = 403
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 46/258 (17%), Positives = 95/258 (36%), Gaps = 11/258 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT--VIDVVFGAWPEVI 74
E F E+ AS ++ + +++ PF L + ++ P+ I
Sbjct: 28 ERFREDRLGLTASSLTFTTTIAMVPFFTVALALFTVFPMFAKLQGRLQRWLIESLIPDNI 87
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q + A GL + + + + +LN +RV R + LI
Sbjct: 88 ARQVLGYLNQF-SSKAGGLGIAGLVVLLITAIALILTIDKTLNNIWRVRSPRPFAQRVLI 146
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + + A V I+ + L G+
Sbjct: 147 YWAAITLGPLILAVSLSTTSYVFAASRDVVG--------GSILKLFFDTFEFVLLAAGMA 198
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G F + + + +Y+ TYS +Y A++ LV+
Sbjct: 199 SLYHYVPNTNVRWSHAWAGGFFVAAAIEIAKRVLGYYLSLVPTYSVLYGAFATVPILLVW 258
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 259 IYVAWVIVLLGAVIAAYL 276
>gi|227512948|ref|ZP_03942997.1| ribonuclease BN [Lactobacillus buchneri ATCC 11577]
gi|227523075|ref|ZP_03953124.1| ribonuclease BN [Lactobacillus hilgardii ATCC 8290]
gi|227083807|gb|EEI19119.1| ribonuclease BN [Lactobacillus buchneri ATCC 11577]
gi|227089756|gb|EEI25068.1| ribonuclease BN [Lactobacillus hilgardii ATCC 8290]
Length = 299
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 124/279 (44%), Gaps = 2/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + I + H+ + D A+ ++ +L+S+FP + G ++ H
Sbjct: 2 IKSIYLKTKQFIQTLVSHYSQGDVSDSAAVLAFYSLMSIFPILFIGGSILNLFQIH--TG 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ V +P+ I + I L +I + + +S + A + S+N+AY
Sbjct: 60 DIMEYVRPIFPDRIYVMLEPVIDSTLRSGGTSQLSIGLIVTIWSASRAIAAFQRSINKAY 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E ++ R++SF ++LL V +V + F +++ +++ +
Sbjct: 120 GVAEDQTAISNRILSFLWMLLLIVVVVAVMIAFALSQFVFSWLSPILHIPQSIISFVSTV 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +TM+ +++ L + +P AK K + G +FT + ++ A F+ Y+ F+
Sbjct: 180 KWPSTMILVWLLLSVLFYIVPTAKVKFRYVWFGALFTTLGLMILAQAFSIYVTFFAHRVD 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + + +L G+ +LG +NA++ K
Sbjct: 240 AYKTIGTFIVLMFWLDFSGLIMLLGGVINATIQELRMGK 278
>gi|167761163|ref|ZP_02433290.1| hypothetical protein CLOSCI_03568 [Clostridium scindens ATCC 35704]
gi|167660829|gb|EDS04959.1| hypothetical protein CLOSCI_03568 [Clostridium scindens ATCC 35704]
Length = 281
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 120/267 (44%), Gaps = 3/267 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ I + E+ A A+ + +L + P I+ + + + V
Sbjct: 2 KRLKEIYQKILNMTADVTEDHVGAYAAQSAYFFMLCMIPIILLLITMVQYTPVTKA--DV 59
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ V +P + IT + QV + G+ I+ + A + + GV A+ LN Y+
Sbjct: 60 MTAVIQVFPTSVDSMITSIVNQVY-NQSSGIIPITVVVALWSAGKGVLAMTSGLNCVYKC 118
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R++ R+ + Y ++ + ++ + + V ++ P L NL + R
Sbjct: 119 NETRNYIFLRIRATIYTVMFILVIIFLLVLSVFGNTLNIFIAAHVPILKNLADRLIAMRT 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T + L + + ++ FLP K K+ LPG +F I W++ + +F+ Y+ F +S MY
Sbjct: 179 IITPIVLMVFCLLIYKFLPNRKDKLRKQLPGAVFAAIGWMIVSWIFSVYVDIFKGFSDMY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELN 269
L +I+ ++++Y +LG ELN
Sbjct: 239 GSLTTIVLIMLWMYFCMYCILLGGELN 265
>gi|251779224|ref|ZP_04822144.1| YihY family protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243083539|gb|EES49429.1| YihY family protein [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 282
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 67/262 (25%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
I +D +A+AS ++ LLS FPFI+F L GF +++ + PE +
Sbjct: 19 IVKVKNDDIFALASQLAYYLLLSFFPFIIFLITLIGFSNMDSI--QILNGIRAIVPEAVF 76
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ I++V GL IS L A + SS+G A+ +N+AY E RS+ +IS
Sbjct: 77 DLTSSIIIEVFDKQYTGLLGISILLALWTSSSGFRAVIKGVNKAYSFKEHRSFIKRLIIS 136
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
V+ ++T+++ + V + Y+ K P ++++ R ++ +
Sbjct: 137 MISVIALALTIILALSMLVFGNVIGNYIVKVIPFTNLVIILWNICRYAFVVIIMIFIFAS 196
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ F P+ + + ++PG IF+ + W+V + F+ YI F +S Y L ++ + +L
Sbjct: 197 IYRFTPSKRLRWREVIPGSIFSTLGWIVTSYGFSFYIDNFRNFSRFYGSLGAVFILMTWL 256
Query: 256 YMLGVFFILGAELNASMIIYYW 277
+++ + FILG E+N + +
Sbjct: 257 FLISILFILGVEINCVLEQFKK 278
>gi|313203163|ref|YP_004041820.1| ribonuclease bn [Paludibacter propionicigenes WB4]
gi|312442479|gb|ADQ78835.1| ribonuclease BN [Paludibacter propionicigenes WB4]
Length = 440
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 104/276 (37%), Gaps = 4/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R Y + I A F+ ++ AS ++ S L ++ P + G + + +
Sbjct: 31 RRYAYRLVKTIILATRGFIVDNLNVRASALTYSILFAIIPTFALIIAIGKGFGVEKIIES 90
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+D F ++ + + + + N + + N ++
Sbjct: 91 SLDNTFIGQADMTPTVMGFVDRYLATTQRGLFIGVGIAILFWSVMNLFMQVERAFNSIWQ 150
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R++ F +++ + +V + + + AL + L I+ G
Sbjct: 151 VKKKRTFIRQFSTYFSGIMVVPLLIVFSGGLSIYVSSALKQSYVY----DVLSPILRFGV 206
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +I +++ +P + K + + I ++ + +L+ + V S Y+ +
Sbjct: 207 KFLPYIINWIVFTSMYMIIPNTRVKFSNAMIAGIVAGTAFQIFQMLYINGQVYLSRYNIV 266
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y A+I L++L + + +LGAE++ +
Sbjct: 267 YGSFAAIPLLLLWLQISCLIVLLGAEISYVSQNMHN 302
>gi|255283321|ref|ZP_05347876.1| YihY family protein [Bryantella formatexigens DSM 14469]
gi|255266175|gb|EET59380.1| YihY family protein [Bryantella formatexigens DSM 14469]
Length = 310
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 118/270 (43%), Gaps = 3/270 (1%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F + + + ++ A A+ +L ++ FPF + L + V+
Sbjct: 33 RFWKFYKLFRRFMRKMKKDRVDAFAAQSALFIIMGFFPFFMLLLTLIQYTPLTS--DMVM 90
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D++ P I + ++ + + L + + +AA + ++ V A+ LN V
Sbjct: 91 DLLMEILPSSFYDLIAGIVEELFSS-STALLSGTVIAALWAAARSVLAITNGLNSVRGVE 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R++ RL S Y+L +V+ + + L ++FP LG+ +I R
Sbjct: 150 ENRNYVFMRLRSGLYILFLIFAIVLACILLLFGNLLQNTAFQYFPVLGSFTGMIVLVRAV 209
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ML L + + ++ LP K KI+ +PG +F +W + + F+ Y S +++Y
Sbjct: 210 ISMLVLSLVFLAMYCSLPNCKIKIIRQIPGAVFAASAWAIYSYGFSLYFDYASHSTSIYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L +++ +++LY GAE+N +
Sbjct: 270 SLTTVVMIMLWLYFCMWLLFAGAEVNCYLE 299
>gi|117927634|ref|YP_872185.1| putative ribonuclease BN [Acidothermus cellulolyticus 11B]
gi|117648097|gb|ABK52199.1| putative ribonuclease BN [Acidothermus cellulolyticus 11B]
Length = 300
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 108/273 (39%), Gaps = 3/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFG 68
I A+ F + +A+ ++ L S FP + + G + V + G
Sbjct: 28 RIFGGAVREFSDHRCTLLAAALAYHVLFSFFPLALVAVGIVGLVSSDPAVRNEVATRIVG 87
Query: 69 AWPEVIAKPIT-DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P A +L +A + + + +S + ALR LN+A+ V R
Sbjct: 88 IVPLNTAGRDQLANLLTSIAGARGAIGFVGLAGLWWSASGVMGALRGGLNQAFDVTAKRR 147
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYATM 186
++ + + VL A V + + V + + + + L + ++ G + +
Sbjct: 148 FWRAKFLDLVLVLGAVVVVGVSFGVTILVGIFQHIAHRLPGVLADAGSWLVDTGGLGIAL 207
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +F + ++ ++P S+I+ + PG + + F Y+ F Y+ +Y L
Sbjct: 208 LFIFTMCLLLYRYVPVQSSRIVDLWPGALVAAVGLEALQYGFAFYLSNFGHYNRVYGTLG 267
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
I+ L F+Y+ G F GAE+ Y R+
Sbjct: 268 GIVAFLFFVYVAGAVFFFGAEVADGYARYRLRR 300
>gi|15892593|ref|NP_360307.1| hypothetical protein RC0670 [Rickettsia conorii str. Malish 7]
gi|238650246|ref|YP_002916097.1| ribonuclease BN, putative [Rickettsia peacockii str. Rustic]
gi|15619759|gb|AAL03208.1| unknown [Rickettsia conorii str. Malish 7]
gi|238624344|gb|ACR47050.1| ribonuclease BN, putative [Rickettsia peacockii str. Rustic]
Length = 275
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 137/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R +
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|118444295|ref|YP_877597.1| ribonuclease BN [Clostridium novyi NT]
gi|118134751|gb|ABK61795.1| ribonuclease BN, putative [Clostridium novyi NT]
Length = 271
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 60/263 (22%), Positives = 126/263 (47%), Gaps = 2/263 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I+ + +++ +A+AS ++ S LLS FPF++F +A F +I +
Sbjct: 8 NLIFKLLYKLKKDEIFALASQLAYSLLLSFFPFLIFLFTVASFSSLKS--EGIIITLKSV 65
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + L + S + + +SNG +A+ +LN+AY E RS++
Sbjct: 66 IPESAYTLVHSILNETFEASNVNLLSFSFIITIWIASNGFKAVIRALNKAYGQEEERSFF 125
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + ++ + ++ F+ V + + NL I R + ++ +
Sbjct: 126 KIQFMGIISTIILTFLIIFSLFILVLGNIIGLKIITMLSLSINLYFIWNVLRYFVMLIFM 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ V+ P K K ++PG IF I W+V ++ F+ Y+ F+ YS +Y + +++
Sbjct: 186 IVIFAIVYKITPCRKLKFKDVIPGAIFATIGWIVVSLGFSFYVDNFANYSRLYGSIGAVI 245
Query: 250 TCLVFLYMLGVFFILGAELNASM 272
LV+L++ + ++G E+NA +
Sbjct: 246 VILVWLFLSSIIILIGGEINAIL 268
>gi|304386338|ref|ZP_07368671.1| YihY family protein [Pediococcus acidilactici DSM 20284]
gi|304327695|gb|EFL94922.1| YihY family protein [Pediococcus acidilactici DSM 20284]
Length = 304
Score = 129 bits (324), Expect = 5e-28, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + ++ F E + + ++ LLS FP ++ L V T
Sbjct: 8 KVFLRKSETFLKALLKRFNEAEVVNNSIVLAYYLLLSFFPLVMLLGTLLPLF--QIRVNT 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + A PE I + L LF+ S + + +S V A + ++NRAY
Sbjct: 66 VLEYIETAVPETIYNITEPIVKDFLGSGNGELFSFSLVMTVFSASQAVAAFQRTVNRAYG 125
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ I R++SF ++ + ++ F+F ++Y+ +L ++ +
Sbjct: 126 VAKYQNPIINRVVSFFLTVVIIAIMAVLVFLFSFGQTLVSYLTPILNLPTHLFALVGQLK 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T++ LF+GL ++ +P AK + ++PG +F I +V + +F+ Y+ F+ T
Sbjct: 186 WPVTIVGLFVGLSLLYYLVPNAKIRFKYVIPGTVFATIGTMVLSQVFSFYLRIFARSVTS 245
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + + +L + + G LNA+ K
Sbjct: 246 YKTLGTFIAIMFWLNFSAMIIMFGGVLNATWQELREGK 283
>gi|326792696|ref|YP_004310517.1| ribonuclease BN [Clostridium lentocellum DSM 5427]
gi|326543460|gb|ADZ85319.1| ribonuclease BN [Clostridium lentocellum DSM 5427]
Length = 289
Score = 129 bits (323), Expect = 5e-28, Method: Composition-based stats.
Identities = 61/273 (22%), Positives = 129/273 (47%), Gaps = 3/273 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + I + + A +++++ +L+ FPFI+F +L + V
Sbjct: 4 RAKENRIVQFLRKMIRRYSAHNVSATSAYMAYYWVLAFFPFIIFLISLLSYTKIP--VSV 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P+ + I + I Q + + L ++ L + + V AL ++ AY
Sbjct: 62 LLQYLSEMVPDSLVPVIENTIKQFILYRSTALLSVGGLVTLWSAGTAVNALTRGIHIAYN 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-G 180
++ ++ RLI+ Y +L ++ L+++ V Y+ + + IWN
Sbjct: 122 SKYIKPFWQARLIALVYTVLLALLLILLMVGLVFGNRLGDYLFGVLDMQKGIFMPIWNMA 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R+ +AL + L ++ F+P K ++ PGV+FT + W + +++F+ Y+ +S Y+
Sbjct: 182 RLTMPFIALIVVLYIIYKFIPRKYLKSTNVWPGVMFTSVGWYLFSLIFSIYVDNYSKYNQ 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y + S+ L++LY +LGAE+NA +
Sbjct: 242 LYGSIGSVFILLIWLYGSCTLLLLGAEINAQLQ 274
>gi|283796441|ref|ZP_06345594.1| YihY family protein [Clostridium sp. M62/1]
gi|291075850|gb|EFE13214.1| YihY family protein [Clostridium sp. M62/1]
gi|295091415|emb|CBK77522.1| Predicted membrane protein [Clostridium cf. saccharolyticum K10]
Length = 279
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 60/272 (22%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ FV+++ A+ S +LS PFI+ + F+ A Q + ++ P
Sbjct: 9 KQIYDKFVKDEITVYAAQASFFIVLSSVPFIILLLTVLQFVPAVQ-QSDFLYLLSRLLPI 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + ++ + + L ++S++ + +S G+ + LNR R + I+R
Sbjct: 68 EVQPLVYTIVDEIYSKSSAALLSVSSITTLWSASRGMLGIEKGLNRIAGSPRRRGYVISR 127
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+I+ GY ++ ++ + V + + K P L L + + R ++ L
Sbjct: 128 IINSGYTIVFMAVCILSLILLVFGTVIQNLIFKILPFLQGLSPYLISLRSMLALVILVAF 187
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ FLP + ++ LPG +F+ + W++ + + Y FS++STMY LAS+ +
Sbjct: 188 FMGLYTFLPYERQRLRCQLPGAVFSTLCWILFSYASSLYFKYFSSFSTMYGSLASLAVLM 247
Query: 253 VFLYMLGVFFILGAELNA---SMIIYYWRKKP 281
++LY LGAE+N ++ Y + ++P
Sbjct: 248 LWLYFCICILFLGAEINCHLTALGRYRFCRRP 279
>gi|251799250|ref|YP_003013981.1| ribonuclease BN [Paenibacillus sp. JDR-2]
gi|247546876|gb|ACT03895.1| ribonuclease BN [Paenibacillus sp. JDR-2]
Length = 296
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 126/270 (46%), Gaps = 8/270 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + F ++D A+ + ++ +LS FPF++F +L F+ +V+ +
Sbjct: 6 RIVPFFKNLYSRFRDDDVPALGAQLTYYFILSFFPFLIFVVSLMSFVQLSG--DSVVAEL 63
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
PE + I + V+ L +I +A + +SNGV A+ +N+AY V E R
Sbjct: 64 IRLLPEQTGEAIQSILQDVMNNSRVTLLSIGMIATLWSASNGVNAIIKGVNKAYDVEENR 123
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ R IS L+ ++ +++ + + + ++ +F + + LI + +
Sbjct: 124 PFWKVRAISLAATLVLALAILLAIVLLIFGEVIGEFLFDWFDSPVSFELIWGILKYVFPI 183
Query: 187 ---LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L +F ++ +P K + ++ PG +F W+ ++LF YI F YS Y
Sbjct: 184 SFMLVVFS---LLYWIVPNHKIRFKTVFPGALFATFGWIASSLLFQFYINNFGNYSKTYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ I+ L++LY+ ILG E+NA++
Sbjct: 241 SIGGIIILLIWLYISSNIIILGGEVNATLA 270
>gi|300865881|ref|ZP_07110623.1| Ribonuclease BN [Oscillatoria sp. PCC 6506]
gi|300336121|emb|CBN55781.1| Ribonuclease BN [Oscillatoria sp. PCC 6506]
Length = 304
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 36/279 (12%), Positives = 92/279 (32%), Gaps = 5/279 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
+ +I + + + ++ +A+ ++ + S+ P ++ +AG G ++
Sbjct: 3 LKRIISLIKETFKEWQKDKAPTLAAALAFYTVFSLAPLLIIVIAIAGLVFGQEAAQGQLV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + A+ I + + + I + ++N L+ +LN + V
Sbjct: 63 GQLQSLVGKDGAETIQQLVANASHRQSGIIATVIGVATLLWGATNVFTNLKEALNMIWNV 122
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNG 180
+ + A + + + + A+ + L +
Sbjct: 123 EPPPGRGWLGFLQDRVLSFAMILSIGFLLLVSLVISAVLTAINQWLNGLLHIPSGLWQLI 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + ++ FLP K + G T + + +G L Y+ + S +
Sbjct: 183 DFGISFSVVTVLFALIYKFLPDVKLVWNDVWVGAAITSVLFTIGKSLIGIYLGS-SGIGS 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y S + L+++ LGAE Y +
Sbjct: 242 TYGAAGSFVILLLWINYSAQILFLGAEFTQVWTNRYGSR 280
>gi|121605663|ref|YP_982992.1| putative ribonuclease BN [Polaromonas naphthalenivorans CJ2]
gi|120594632|gb|ABM38071.1| tRNA-processing RNAse BN [Polaromonas naphthalenivorans CJ2]
Length = 404
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 93/258 (36%), Gaps = 9/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
F E+ AS ++ + +++ PF + + + +V P+ I
Sbjct: 28 NRFREDRMGLTASSLTFTTSIALVPFFTVALAVFTAFPMFSKLQGALEAWLVKSLIPDNI 87
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q + A L + + + +LN +RV + R LI
Sbjct: 88 ARQVLGYLTQF-SGQASKLGVAGLAVLVVTAIALILTIDRTLNSIWRVRKPRPLGQRVLI 146
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L V + A + + P + A + G+
Sbjct: 147 YWAAITLGPLVLAASLAVTSYVVSASSGLVGALPFS------LRFLLDVAQFFLVAGGVA 200
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G +F G + Y+ TYS +Y A++ LV+
Sbjct: 201 ALYRYVPNTYVQWAHAFAGGLFVAAGLETGKKVMGIYLTAVPTYSLVYGAFAALPILLVW 260
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ + ++GA + A +
Sbjct: 261 IYVSWIIVLMGAVITAWL 278
>gi|103486149|ref|YP_615710.1| ribonuclease BN [Sphingopyxis alaskensis RB2256]
gi|98976226|gb|ABF52377.1| ribonuclease BN [Sphingopyxis alaskensis RB2256]
Length = 355
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 59/268 (22%), Positives = 119/268 (44%), Gaps = 3/268 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I+ + + G+ A +++ AL+++FPF + A +G ++ VF
Sbjct: 69 YRIVRRVVVGTYTD-GFIHAGNLAYLALIALFPFFILLAAALSLVGGSVGGERAVEAVFS 127
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +AK ++ I +V++ + AL A + + +E +R L RAY + +
Sbjct: 128 TMPPTVAKALSGPIREVMSARTGIFLWLGALVALWTVGSLIETVRDILRRAYGTHFSKGF 187
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ RL+S G + A V +++ + V I +V + P +++ R +
Sbjct: 188 FHYRLLSIGIITGAVVLMLLSFSMQVLIVGVEQFVTRVLPEQYQARGLVFISRAVSGFGL 247
Query: 189 LFIGLIFVHLFLP--AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + P + K PG +FT + W+ + + + +Y Y LA
Sbjct: 248 FVAIYLLFYSLTPSKYRRLKRCPKWPGALFTTLWWIGVTLALPPLLASLLSYDATYGSLA 307
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMII 274
+M L F Y++G+ ++GAELNA+++
Sbjct: 308 GVMVALFFFYLVGLGMVMGAELNAALVE 335
>gi|86142235|ref|ZP_01060745.1| hypothetical protein MED217_11334 [Leeuwenhoekiella blandensis
MED217]
gi|85830987|gb|EAQ49444.1| hypothetical protein MED217_11334 [Leeuwenhoekiella blandensis
MED217]
Length = 316
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 51/272 (18%), Positives = 120/272 (44%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D ++ AS I+ S +++FPF +F NL ++ + F + +
Sbjct: 35 LYDFWEMYAVGILKGTFATRASAIAFSFFMALFPFFLFVLNLIPYVPINGFQSDFLSFIN 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + +L + A GL + + + A + +NGV A+ ++ + RS
Sbjct: 95 NLLPPQTQEFFDPILLDIAANQRGGLLSFTLIFAIFLMANGVNAIFTGFEYSFHSITNRS 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ G ++ ++ L+++ + + + ++ +++ + L I G A ++
Sbjct: 155 IVKQYAVALGVSIMLALLLLLVVIAVLYLQITISELKRRGIVNEDNLWISQLGSYIALIV 214
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ + ++ F + G T ++V LF YI F+TY+ +Y + +
Sbjct: 215 LIYTVVATLYYFGTKEGKDTRFLSIGATLTTFLFIVTTYLFGVYINNFATYNQLYGSIGA 274
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +V++++ +LG ELNAS+ R+
Sbjct: 275 LLIMMVYIWLNANLLLLGFELNASLYRLKRRR 306
>gi|172036709|ref|YP_001803210.1| ribonuclease BN [Cyanothece sp. ATCC 51142]
gi|171698163|gb|ACB51144.1| probable ribonuclease BN [Cyanothece sp. ATCC 51142]
Length = 293
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 108/282 (38%), Gaps = 11/282 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
++ ++ + + + ++D ++A+ ++ +S+ P ++ ++AG G ++
Sbjct: 3 IRVLIKLLKETFKEWQQDDASSLAASLAYYTSVSLAPLLIIVISIAGAVFGEEAARGEIV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G A+ I I + IS + + +S L+ SLN+ ++V
Sbjct: 63 SQIQGLVGTNGAELIETAIENADQPQISNFASIISIIILLFGASGVFAQLQKSLNKVWQV 122
Query: 123 VEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
++ R++SF +L L++ + A+ Y+ P + +
Sbjct: 123 QVKSEEGWKNLIRKRILSFSAILGLGFLLLVSLIISAALSGLNHYLSDIIPGID---FLW 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + + ++ +LP K + G I T + + +G Y+
Sbjct: 180 QVLDFCLSFVVIALVFGLMYRYLPDVKISWDDVKIGAIITALLFTIGKFALGLYLGR-GG 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++Y S++ LV++Y GAE Y K
Sbjct: 239 FGSVYGAAGSLVIILVWVYYSAQILFFGAEFTQVYARRYGSK 280
>gi|229586760|ref|YP_002845261.1| Putative ribonuclease BN [Rickettsia africae ESF-5]
gi|228021810|gb|ACP53518.1| Putative ribonuclease BN [Rickettsia africae ESF-5]
Length = 275
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 137/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFRTIEDDGIEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R +
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|157964558|ref|YP_001499382.1| putative ribonuclease BN [Rickettsia massiliae MTU5]
gi|157844334|gb|ABV84835.1| Putative ribonuclease BN [Rickettsia massiliae MTU5]
Length = 288
Score = 129 bits (323), Expect = 6e-28, Method: Composition-based stats.
Identities = 79/276 (28%), Positives = 137/276 (49%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I
Sbjct: 13 IMRKIFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFI 72
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 73 QIFLESLPEQATESIAKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIK 132
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 133 SPPPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYS 192
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ LF+G ++ LP K + + PG + T I W++ L + YI+ ++ + MY
Sbjct: 193 LILILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIIYYNQLNLMYG 252
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L SI+ L+F Y++ + FI GAE N M Y K
Sbjct: 253 SLGSIIVTLIFFYIINMIFIYGAEFNYLMKNYENIK 288
>gi|95928810|ref|ZP_01311556.1| ribonuclease BN, putative [Desulfuromonas acetoxidans DSM 684]
gi|95135155|gb|EAT16808.1| ribonuclease BN, putative [Desulfuromonas acetoxidans DSM 684]
Length = 437
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 108/268 (40%), Gaps = 5/268 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ A+ F + A+ ++ + LL++ P + L LG H + + +
Sbjct: 30 IARVLAAALIGFRRHNCIQHAAALTFNTLLALIPLLAIMFALLKGLGVHNTIEPM---LL 86
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + + I + L ++ + + + + S N ++V E RS
Sbjct: 87 KQLSVGSEEVVANIITYINNTNVGRLGSVGLVMLVFTVLALLSNIEKSFNDLWQVQETRS 146
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ F V L + +++ V + + +V ++ + +
Sbjct: 147 LFRRFADYFSVVTLGPL--FVLAAVSMNTSIRSQHVVQWLLSKPVFGDALLLLFEVLPFF 204
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A++ IF+++F+P K K++S L G I W++ + ++ Y+ +Y +A+
Sbjct: 205 AIWAAFIFLYMFVPNTKVKLVSALVGGISAGSLWLLTQWAYINFQYGVGKYNAIYGTMAA 264
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++LY+ + +LG EL +
Sbjct: 265 LPIFMIWLYVSWMITLLGVELCWAFQFR 292
>gi|157828543|ref|YP_001494785.1| hypothetical protein A1G_03800 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933259|ref|YP_001650048.1| ribonuclease BN [Rickettsia rickettsii str. Iowa]
gi|157801024|gb|ABV76277.1| hypothetical protein A1G_03800 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908346|gb|ABY72642.1| ribonuclease BN [Rickettsia rickettsii str. Iowa]
Length = 275
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 78/270 (28%), Positives = 136/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKICNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQAMESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R +
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|302381611|ref|YP_003817434.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
gi|302192239|gb|ADK99810.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
Length = 406
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 117/272 (43%), Gaps = 10/272 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
DI++ + + + +A ++ LLS+FP + + G I ++
Sbjct: 84 WIDIVWRVVNGYFNDQVGFVAGGVTFLMLLSLFPTLAAFVTVYGLFADPADASARIQFLY 143
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P +A + E+ ++ A L + + + ++NGV+ L +N AY VE
Sbjct: 144 SFLPANVAGFLAQELTRLAAGSTGSLTFTLIWTLALSLWTANNGVKTLFHGINVAYHEVE 203
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L+ F + L +++ + + V +P+ L L + + R
Sbjct: 204 KRDFVQYNLLCFAFTLSGLAAVLLSAALVVGVPIFLG-----LFGLADDWERLAPLRWPM 258
Query: 185 TMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L+ ++ F P+ +++I ++PG +F V + F+ Y+ TF + Y
Sbjct: 259 LFAIYVLTLVTMYRFGPSRTRARIRWLVPGALFAASVSVFISFAFSWYLTTFVRMDS-YG 317
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA+ M L+++++ ++GA+LNA +
Sbjct: 318 PLATAMGFLLWVWLSVQVVLMGAKLNAEIEHQ 349
>gi|49476272|ref|YP_034313.1| ribonuclease RNAse BN transmembrane protein [Bartonella henselae
str. Houston-1]
gi|49239080|emb|CAF28383.1| Ribonuclease RNAse bn transmembrane protein [Bartonella henselae
str. Houston-1]
Length = 284
Score = 129 bits (323), Expect = 7e-28, Method: Composition-based stats.
Identities = 109/277 (39%), Positives = 175/277 (63%), Gaps = 1/277 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F + I+ DA+ H+ ++G A ASH++LS LL++FPF +FGA+LA F+GA + P
Sbjct: 2 LKRIFWYSYRILVDAVSHYWRDNGSAFASHVALSGLLALFPFFIFGASLASFIGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ +I+ VL + +G+ T+S + AAYF+SNGVEALR +LN+AY
Sbjct: 62 QKIKALLQLLPDVIAEPLSQDIVNVLTIQRRGVLTVSVIGAAYFASNGVEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V+L + LV++SF+ + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVILGAFGLVVISFLLILAPLIIKIMQDHSFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + +LPG++ T W + ++ F Y+ F Y +
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAERRKFIDVLPGIVVTMSVWFMASLAFAQYLTMF-DYIS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
YAGLASIM ++FLY+L FILG E+NA+++ Y
Sbjct: 241 TYAGLASIMVAIIFLYILSAIFILGGEINAAIMFYRN 277
>gi|292486531|ref|YP_003529397.1| tRNA processing exoribonuclease BN [Erwinia amylovora CFBP1430]
gi|292897768|ref|YP_003537137.1| tRNA-processing ribonuclease BN [Erwinia amylovora ATCC 49946]
gi|291197616|emb|CBJ44710.1| tRNA-processing ribonuclease BN [Erwinia amylovora ATCC 49946]
gi|291551944|emb|CBA18981.1| tRNA processing exoribonuclease BN [Erwinia amylovora CFBP1430]
Length = 290
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 94/278 (33%), Gaps = 6/278 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ I + E+ +A H++ +LLS+ P I L V
Sbjct: 9 HRLRAFWTWIKLLWQRIDEDAMTVLAGHLAYVSLLSLVPLIAVVFALFTAFPMFSDVSVQ 68
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ A L+ + + + + ++ +LN +R
Sbjct: 69 LKNFAFHNLVPAAGTTVQNYLEQFVANVSRMTAVGVGGLVVTALLLMYSIDSALNTIWRS 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + + + + L + + + + +G L ++I
Sbjct: 129 KVKRPLVYSLAVYWMILTLGPLLAGASLAISSYLLSL------HWATIGGLSVLIDMVLR 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + ++ +P A L G I I + +G FT YI TF +Y +Y
Sbjct: 183 IFPLLLSCLSFWLLYSLVPTAPVAGHDALVGAIVGGILFELGKKGFTLYITTFPSYQLIY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA + +++Y +LGAE+ A++ Y K+
Sbjct: 243 GVLAVVPILFLWVYWTWCIVLLGAEITATLADYRRLKR 280
>gi|85714895|ref|ZP_01045881.1| ribonuclease BN [Nitrobacter sp. Nb-311A]
gi|85698381|gb|EAQ36252.1| ribonuclease BN [Nitrobacter sp. Nb-311A]
Length = 286
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 107/269 (39%), Positives = 165/269 (61%), Gaps = 2/269 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF G+ + ++ WPE
Sbjct: 1 MDAFYTFLADDGWAIASHIALSVLMALFPFLIVLTSLAGFFGSKELADQAAQLMLQIWPE 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+A ++ EI VL TI + A YF+SNGVE+LR++LNRAY V+E R WY R
Sbjct: 61 QVANTLSSEIHDVLTTSRGDALTIGLVLAVYFASNGVESLRVALNRAYAVIESRRWYWLR 120
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIYATMLALFI 191
L S GY L+A+VT + M+F+ V PL +A ++ P + ++ R T+LA+F+
Sbjct: 121 LESIGYTLVAAVTALAMAFLIVLGPLIIAAAKRHIPLIVESNESLLNIARYGITILAMFV 180
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLASIMT 250
L+ +H +LPA + I+PG++FT ++ ++ + F Y+ F+ Y TMYAGLAS++
Sbjct: 181 ALLILHAWLPAGRRSFRQIIPGIVFTMLASLMSGIGFGLYLARFANNYVTMYAGLASVVI 240
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
LVFLY + F+ G ELNA++I +
Sbjct: 241 ALVFLYFIAAIFVFGGELNAAIIKSRLPR 269
>gi|119505904|ref|ZP_01627967.1| probable ribonuclease [marine gamma proteobacterium HTCC2080]
gi|119458263|gb|EAW39375.1| probable ribonuclease [marine gamma proteobacterium HTCC2080]
Length = 418
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 96/257 (37%), Gaps = 8/257 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWP 71
+ + ++ +A+ + +L ++ P + ++ + A + +
Sbjct: 15 RYLFQRYQDDRCSEIAAALVYMSLFALVPLLTLIYAISTAVPTATDLQAQLQQFLIDNLL 74
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
++ + D + + AK L I + + + + N +R + RS +
Sbjct: 75 PEASQDVADYLASF-SEQAKNLTGIGIAILVTTAVLMLRNVESAFNNIWRNSKNRSVVSS 133
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L+ + + L + + + V + A V ++L + +
Sbjct: 134 LLLYWAVLSLVPILIGLGIGVKAYLFSAAHAVEGI-----DVLGVSSALLSMLPFSLGIL 188
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
G+ +++ +P + G +F +++ LFT I S+Y+ +Y A++
Sbjct: 189 GVTALYMAVPNCAVPFRHAILGGLFVAVTFTAAKTLFTAAISN-SSYALVYGAFAAVPIF 247
Query: 252 LVFLYMLGVFFILGAEL 268
L++LY+ +LGA +
Sbjct: 248 LLWLYISWTIILLGAIV 264
>gi|150019687|ref|YP_001311941.1| ribonuclease BN [Clostridium beijerinckii NCIMB 8052]
gi|149906152|gb|ABR36985.1| putative ribonuclease BN [Clostridium beijerinckii NCIMB 8052]
Length = 284
Score = 128 bits (322), Expect = 7e-28, Method: Composition-based stats.
Identities = 69/271 (25%), Positives = 129/271 (47%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I I +D +A+AS ++ +LS FPF++F LAGF ++ +
Sbjct: 11 NLIIHLIVKIKRDDVFALASQLAYYLILSFFPFMLFLMTLAGFSSISS--KQILGQLNVM 68
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + ++++ GL IS L + +S+ +A+ S+N+AY E RS+
Sbjct: 69 LPRSVLELTQSTVVEIFDNQYTGLLGISILLTLWTASSAFKAIIKSINKAYNFKEERSFI 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+IS +L +VT+++ V + Y++ P +L+I R + +
Sbjct: 129 KLSIISMLGILALAVTIILALTALVFGNVIGDYIKSINPFYEIILIIWNIFRYTFILAIM 188
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I V+ F PA K ++ G IF+ + WV+ + +F+ YI F+ YS Y L ++
Sbjct: 189 ISIFICVYKFAPAKKLVWKEVIAGSIFSTVGWVLVSFVFSFYIDNFNNYSRFYGSLGAVF 248
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +L+++ + FILG E+N R +
Sbjct: 249 ILMTWLFLISIIFILGVEINFVTSELRGRNR 279
>gi|312170599|emb|CBX78862.1| tRNA processing exoribonuclease BN [Erwinia amylovora ATCC
BAA-2158]
Length = 290
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 94/278 (33%), Gaps = 6/278 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ I + E+ +A H++ +LLS+ P I L V
Sbjct: 9 HRLRAFWTWIKLLWQRIDEDAMTVLAGHLAYVSLLSLVPLIAVVFALFTAFPMFSDVSVQ 68
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ A L+ + + + + ++ +LN +R
Sbjct: 69 LKNFAFHNLVPAAGTTVQNYLEQFVANVSRMTAVGVGGLVVTALLLMYSIDSALNTIWRS 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R + + + + L + + + + +G L ++I
Sbjct: 129 KVKRPLVYSLAVYWMILTLGPLLAGASLAISSYLLSL------HWATIGGLSVLIDMVLR 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + ++ +P A L G I I + +G FT YI TF +Y +Y
Sbjct: 183 IFPLLLSCLSFWLLYSLVPTAPVAGHDALVGAIVGGILFELGKKGFTLYIPTFPSYQLIY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA + +++Y +LGAE+ A++ Y K+
Sbjct: 243 GVLAVVPILFLWVYWTWCIVLLGAEITATLADYRRLKR 280
>gi|169632391|ref|YP_001706127.1| putative ribonuclease (Rbn) [Acinetobacter baumannii SDF]
gi|169794639|ref|YP_001712432.1| putative ribonuclease (Rbn) [Acinetobacter baumannii AYE]
gi|184159553|ref|YP_001847892.1| hypothetical protein ACICU_03233 [Acinetobacter baumannii ACICU]
gi|213158790|ref|YP_002320788.1| putative ribonuclease [Acinetobacter baumannii AB0057]
gi|215482228|ref|YP_002324410.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB307-0294]
gi|239504229|ref|ZP_04663539.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB900]
gi|301345381|ref|ZP_07226122.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB056]
gi|301511247|ref|ZP_07236484.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB058]
gi|301595629|ref|ZP_07240637.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB059]
gi|332855628|ref|ZP_08435971.1| YihY family protein [Acinetobacter baumannii 6013150]
gi|332868559|ref|ZP_08438225.1| YihY family protein [Acinetobacter baumannii 6013113]
gi|332873002|ref|ZP_08440961.1| YihY family protein [Acinetobacter baumannii 6014059]
gi|169147566|emb|CAM85427.1| putative ribonuclease (Rbn) [Acinetobacter baumannii AYE]
gi|169151183|emb|CAO99858.1| putative ribonuclease (Rbn) [Acinetobacter baumannii]
gi|183211147|gb|ACC58545.1| predicted membrane protein [Acinetobacter baumannii ACICU]
gi|193078443|gb|ABO13434.2| putative ribonuclease (Rbn) [Acinetobacter baumannii ATCC 17978]
gi|213057950|gb|ACJ42852.1| putative ribonuclease [Acinetobacter baumannii AB0057]
gi|213987057|gb|ACJ57356.1| tRNA-processing ribonuclease BN(RNase BN) [Acinetobacter baumannii
AB307-0294]
gi|322509463|gb|ADX04917.1| Rbn [Acinetobacter baumannii 1656-2]
gi|323519484|gb|ADX93865.1| hypothetical protein ABTW07_3448 [Acinetobacter baumannii
TCDC-AB0715]
gi|332727343|gb|EGJ58779.1| YihY family protein [Acinetobacter baumannii 6013150]
gi|332733329|gb|EGJ64522.1| YihY family protein [Acinetobacter baumannii 6013113]
gi|332738784|gb|EGJ69652.1| YihY family protein [Acinetobacter baumannii 6014059]
Length = 415
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 100/280 (35%), Gaps = 4/280 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I I+ F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFILFVIKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + D+ L + L I L + + ++ NR +
Sbjct: 69 QQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E RS + + + + L + L + + F + ++
Sbjct: 129 RVKETRSGIVGFMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFLL--- 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +G ++ +P + + + + LF+ + F++Y
Sbjct: 186 -WLISFVLTILGFFILYWTIPNRTVPLYAAAIAACLSAALFETLKNLFSFVMSNFTSYEI 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 245 IYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKE 284
>gi|284036533|ref|YP_003386463.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283815826|gb|ADB37664.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 318
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 121/276 (43%), Gaps = 2/276 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVV 66
+ + ++ + + A+ +S S +L+VFP ++F L F+ ++
Sbjct: 30 WYSFLKKMLDQITDNNTSERAASVSYSLILAVFPTVIFFFTLIPFITFIPNLEEQIMGFF 89
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + I +++ P G+ + L A Y +++G+ AL + N +Y E R
Sbjct: 90 REVLPGNTFSSVDTTIRDIVSRPRSGVLSFGFLLALYSATSGLVALMQAFNSSYHSDERR 149
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYAT 185
++ RL++ G + L++ V + + Y+ F L + ++ R
Sbjct: 150 GFFKVRLVAIGLTFTLAFALILAIVVLIIGGIISDYLLHFGLLNNALFINLLAITRYLVV 209
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ ++ + P + K + I PG + + V+ + F++Y+ F +Y+ +Y +
Sbjct: 210 FAVFVGTVSVIYRYGPDVRMKWVFITPGAVTASLLIVLTTLGFSYYVSNFGSYNKVYGSI 269
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++ ++++ ++ + ILG E+N ++ + P
Sbjct: 270 GTLIALMIWINLISLLLILGFEMNVALYNLEGDRSP 305
>gi|221133917|ref|ZP_03560222.1| ribonuclease BN [Glaciecola sp. HTCC2999]
Length = 297
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 98/263 (37%), Gaps = 8/263 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWP 71
+ + A H++ +LLS+ PFI+ + A + + +F +
Sbjct: 25 KYFLARCANDKVTVSAGHLAYVSLLSLVPFIMVFFTMLSAFPAFAEIRLALESFIFNNFV 84
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I + + + G+ + + + + + +LN +R E R T
Sbjct: 85 PTSGDVLQKYISEFVGNAS-GMGAVGIASLMVVALLLIMNIDKTLNTIWRTPEARPRMFT 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + V + +Y ++ P LG L +
Sbjct: 144 FAVYWMVITLGPIMMGSSILVSSYLLGFASYAEEYTPGLGTL------LLKMVPSVTATF 197
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
G + +++ +P + K L G I + + F Y+ +F +Y +Y LA I
Sbjct: 198 GFLILYMLVPNTRVKFSHALCGAILATFLFELSKKGFAFYVASFPSYQVIYGALAVIPIL 257
Query: 252 LVFLYMLGVFFILGAELNASMII 274
V++Y+ + ++GAE S+
Sbjct: 258 FVWVYLSWIVVLVGAEFTCSIDE 280
>gi|253314945|ref|ZP_04838158.1| hypothetical protein SauraC_01970 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 291
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 58/214 (27%), Positives = 101/214 (47%)
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + I I + + GL +I + A + +SNG+ A+ S N AY V +
Sbjct: 1 MLSNAPAETSTLIKSVIGDITQNSSGGLLSIGLILAIWSASNGMTAIMNSFNVAYDVEDS 60
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + +L+S + ++ V V+ + + ++ + I RI
Sbjct: 61 RNGIVLKLLSVVFTVVMGVVFVVALALPTLGSVISHFLFGPLGFDEQVKWIFNLIRIVLP 120
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ +FI I ++ P K+K+ S+LPG +FT I W+ G+ F YI F YS Y +
Sbjct: 121 IIIIFIIFIVLYSVAPNVKTKLKSVLPGAVFTSIIWLAGSFGFGWYISNFGNYSKTYGSI 180
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A I+ L++LY+ I+GAE+NA + K
Sbjct: 181 AGIIILLLWLYITSFIIIVGAEINAIIHQRSVIK 214
>gi|86130265|ref|ZP_01048865.1| YihY family protein [Dokdonia donghaensis MED134]
gi|85818940|gb|EAQ40099.1| YihY family protein [Dokdonia donghaensis MED134]
Length = 313
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 118/274 (43%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ + A I+ S +++FP ++F NL ++ F + ++
Sbjct: 37 LLNLSRAYFTGIIKGALGSRAGSIAYSFFMAIFPALIFVLNLIPYVPVPDFDIKFMAFIY 96
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + GL +++ L A + ++NGV ++ ++ RS
Sbjct: 97 ELIPSQSLDFFRPIISDIAQNERAGLLSVAGLLALFLTANGVNSIFSGFEGSHYNEINRS 156
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYATM 186
++ ++ ++ ++ LV V V L +++ +L + ++ G+ +
Sbjct: 157 FFRQYAVAIATSIILALLLVTTISVVVYFEYLLVSLKERDFMSTDLDITLLSVGKNVFVL 216
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ ++ + ++ F K PG + T + +++ LF YI TF Y+ +Y +
Sbjct: 217 IMIYAVIATLYYFGTKEGRKSRFFSPGALMTTVLFMITTYLFGIYIDTFGRYNELYGSIG 276
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++++++ +LG ELNA++ K
Sbjct: 277 ALLIMMLYIWLNSNLILLGFELNATLQKLRILHK 310
>gi|146301229|ref|YP_001195820.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
gi|146155647|gb|ABQ06501.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
Length = 307
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 120/273 (43%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ +E AS +S S +++FPF +F NL F+ F + V
Sbjct: 35 LYDLLEMYTLGILEGAFSYHASAVSFSFFMALFPFALFILNLIPFIPIDNFQEDFLQFVQ 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ P I+ I +L GL + L + + +NG+ + + V + R
Sbjct: 95 QSVPPNTYDAISKIISDILNNSHSGLLSSGFLLSIFLMANGINGILSGFESSKHVFDKRG 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ L++ L+ +V L + V + + L + + +I GR +L
Sbjct: 155 FFRQYLVALAISLVMTVILFVTVATIVVFEVFIQKTIIQ-DVLSDRIPLIILGRYLFVIL 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ I + + +K+ I G +FT + V+ + F +++ FS Y+ +Y + +
Sbjct: 214 MILITSSILLRYGTKQYNKVPFISIGSVFTTVLIVISSFFFGIWVIKFSKYNELYGSIGT 273
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ + ++++ + +LG ELNAS+ +K+
Sbjct: 274 LLILMFYIWINCMILLLGFELNASIRKLKQKKE 306
>gi|332293231|ref|YP_004431840.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
gi|332171317|gb|AEE20572.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
Length = 315
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 121/274 (44%), Gaps = 1/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ ++ + AS I+ S +++FP ++F NL ++ F + ++
Sbjct: 37 LLYLLRAYFNGIIQGALGSRASSIAYSFFMAIFPALLFLLNLVPYVPIENFDIKFMAFIY 96
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I+ + GL + + L A + ++NGV A+ ++ R+
Sbjct: 97 ELIPAQSLDFFKPIIIDISQNERAGLASFAGLLALFLTANGVNAIFSGFEGSHYNEISRN 156
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYATM 186
++ ++ G ++ ++ LV V + L L +R+ ++ + ++ G+ +
Sbjct: 157 FFRQYAVALGTSIILALLLVTTISVVIYFELLLNSLRERDFMSNDMDIALLSIGKNLFLI 216
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ ++ + ++ F K PG + T I +++ LF YI F TY+ +Y +
Sbjct: 217 IMIYSVIATLYYFGTKEGRKSRFFSPGALMTTILFMITTYLFGIYIDNFGTYNELYGSIG 276
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++++++ +LG ELNA++ K
Sbjct: 277 ALLIMMLYIWLNSNLILLGYELNATLQKLRILHK 310
>gi|152972681|ref|YP_001337827.1| ribonuclease BN [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238892286|ref|YP_002917020.1| ribonuclease BN [Klebsiella pneumoniae NTUH-K2044]
gi|262041657|ref|ZP_06014850.1| tRNA-processing ribonuclease BN [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|166199581|sp|A6TG76|Y4136_KLEP7 RecName: Full=UPF0761 membrane protein KPN78578_41360
gi|150957530|gb|ABR79560.1| ribonuclease BN [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
gi|238544602|dbj|BAH60953.1| ribonuclease BN [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259041010|gb|EEW42088.1| tRNA-processing ribonuclease BN [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 286
Score = 128 bits (322), Expect = 8e-28, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 96/275 (34%), Gaps = 10/275 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ + E+ +A +++ +LLS+ P I L V +
Sbjct: 14 RPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F + I I Q +A ++ + + A S + ++ +LN +R
Sbjct: 74 FIFANFIPATGDVIQGYIEQFVANSSR-MTAVGAFGLIVTSLLLMYSIDSALNTIWRSTR 132
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + + + L + + + +L +I N
Sbjct: 133 SRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLDGVIDNLLRLF 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + ++ +P + + + G + + + G F YI TF +Y +Y
Sbjct: 185 PLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQLIYGV 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + V++Y +LGAE+ ++ Y K
Sbjct: 245 ISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLK 279
>gi|262197105|ref|YP_003268314.1| ribonuclease BN [Haliangium ochraceum DSM 14365]
gi|262080452|gb|ACY16421.1| ribonuclease BN [Haliangium ochraceum DSM 14365]
Length = 370
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 108/280 (38%), Gaps = 12/280 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVF 67
++I+ E F ++ +A+ +S + ++ P +V AG + + V + ID V
Sbjct: 12 WEILKGTFEEFSNDECPRLAAALSYYTVFALPPLLVILIISAGLVLSPAQVQSWIDGQVG 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALA---AAYFSSNGVEALRISLNRAYRVVE 124
+A+ + + + ++ LA + +S L+ +LN + V
Sbjct: 72 SLIGPEVAEQMRVMVEHARSKVSQDFSFGLVLAVGGLLFGASGAFAQLQKALNATWGVTP 131
Query: 125 MR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++ R+ S G +L + L++ + I + P+ + +++W
Sbjct: 132 DPEGGGIKNFVAKRIFSLGIILAIAFFLLVALVISSLIAALSDQLGMLLPSGLS-SVLLW 190
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + +P A + G + T + +V G L + YI S
Sbjct: 191 ALDTGINLAVITLLFGSMFKVMPDAIIAWRDVWVGALVTAVLFVAGKALISFYIGR-SDL 249
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y A++ LV++Y + ++GAE + +
Sbjct: 250 GEIYGATAALAILLVWIYYSSMILLIGAEFTQVWSQRFGK 289
>gi|329901861|ref|ZP_08272948.1| Ribonuclease BN [Oxalobacteraceae bacterium IMCC9480]
gi|327548953|gb|EGF33570.1| Ribonuclease BN [Oxalobacteraceae bacterium IMCC9480]
Length = 430
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 96/256 (37%), Gaps = 9/256 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DV 65
V D+ A EE +A ++ +++L++ P + + +
Sbjct: 10 VRDLFRFAARRLDEEHLPQVAGSLTFTSVLALVPLLTIALAIFTAFPLFNTFRASLEAYF 69
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P+ IA + + + Q A + GL I + + + NR + V
Sbjct: 70 VQNLMPKAIANTVLEYLTQF-AAKSTGLSAIGGGVLIVTAVAMMSTIDRVFNRIWGVRVS 128
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + L+ + V L + + + + + A V P +G + I +
Sbjct: 129 RPFLQRVLVYWAIVTLGPLLIGVSISLTSYLFKATNGVVLAIPLIGAVAYTI------IS 182
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ +++ +P L G + +++ + +F Y+V F TY+ +Y +
Sbjct: 183 VALTTGAFALLYVSVPNRTVDWPDALWGGLLAGVAFEIAKRVFATYVVRFPTYTMVYGSV 242
Query: 246 ASIMTCLVFLYMLGVF 261
A++ L+++YM +
Sbjct: 243 AAVPIFLLWIYMFWMI 258
>gi|198275892|ref|ZP_03208423.1| hypothetical protein BACPLE_02074 [Bacteroides plebeius DSM 17135]
gi|198271521|gb|EDY95791.1| hypothetical protein BACPLE_02074 [Bacteroides plebeius DSM 17135]
Length = 438
Score = 128 bits (322), Expect = 9e-28, Method: Composition-based stats.
Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 6/262 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
IIY +I F+ + AS ++ S LLS+ P + +A G + + G
Sbjct: 35 LKIIYLSINQFINDRIVVRASALTYSTLLSIIPILALLFAIARGFGFDTLIESQFRS--G 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
I+ + + + + ++ + S N ++V + R
Sbjct: 93 VTGAQAELVISWINSYLEHAQSGVFIGVGLIMLLGTVLLLIDNIERSFNAIWQVKKPRGL 152
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +LL V LVI S + + + + ++ L ++
Sbjct: 153 FRQITDYSSLILLLPVLLVISSGLSIFMSTYVKELQN----FMVLAPVLKFFVRLIPYAL 208
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
++ I +++F+P K K+ I ++ + + + S Y+ +Y A+I
Sbjct: 209 IWGMFIGLYIFMPNTKVKLAHAWLPGILAGSAFQAFQYFYINSQIWVSNYNAIYGSFAAI 268
Query: 249 MTCLVFLYMLGVFFILGAELNA 270
L++ + + GAE++
Sbjct: 269 PLFLLWTQISWSICLFGAEMSY 290
>gi|46446532|ref|YP_007897.1| putative RNase BN, tRNA processing enzyme [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400173|emb|CAF23622.1| putative RNase BN, tRNA processing enzyme [Candidatus
Protochlamydia amoebophila UWE25]
Length = 389
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 93/243 (38%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ LLSV P + +A G + + + ++ F E++ K I + V
Sbjct: 1 MTFYTLLSVVPVLAVLFGIAKGFGFEKALESELNQQFLEQKELVEKVIEFAYTWLKTVQG 60
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ I L + + + ++LN ++ R + +L+A + LV S
Sbjct: 61 GVIAGIGTLTLLWTVFGLLNNIEMALNAIWKTRHTRPYSRKISDYLAAMLVAPLFLVTSS 120
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
+ V I + + L ++ ++ FV+LF+P K + S
Sbjct: 121 SINVFINTQITQTAHNNIIVEALSPFLFYLLKLFPYFLGWLLFTFVYLFMPNTKVYLRSA 180
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
L I ++ + ++ + + ++Y +Y A++ L++L + GAE+
Sbjct: 181 LIAGIVAGTAFQIWQWIYIKFQIGVASYGAIYGSFAALPLFLIWLQFSWNILLAGAEMAF 240
Query: 271 SMI 273
+
Sbjct: 241 EIE 243
>gi|83953008|ref|ZP_00961730.1| hypothetical protein NAS141_11906 [Sulfitobacter sp. NAS-14.1]
gi|83841976|gb|EAP81144.1| hypothetical protein NAS141_11906 [Sulfitobacter sp. NAS-14.1]
Length = 303
Score = 128 bits (321), Expect = 9e-28, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 119/277 (42%), Gaps = 9/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ +D + A+ E++ +A+ ++ A+LS+FP + + + V ++
Sbjct: 5 KLYWDALKAALVDISEKNVSLIAAGVAFYAMLSLFPALAALVTILSLISDPVVVIAQLED 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTIS---ALAAAYFSSNGVEALRISLNRAYRV 122
+ G P+ + + D+++ ++ L L A + + GV A+ I LN Y
Sbjct: 65 MRGLLPDDVYDILNDQVVSLVTTSTGKLGWAGAASVLVAMWSARAGVGAMMIGLNSVYSE 124
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R+ L + + +I V P+ L+++ P + R
Sbjct: 125 -RNRNAARHYLRALMLTFTLVMVGLIALITVVIAPIVLSFI----PLGVFGYFVAEIIRW 179
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L L G+ ++ F P ++ +I + G +F SW V ++ F++Y+ F Y+ +
Sbjct: 180 SIAILVLLAGVGVLYRFGPNRRAARIGWLTWGAVFAVFSWAVVSIGFSYYVANFGNYNQV 239
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y + +++ LV+L++ ++GA NA + +
Sbjct: 240 YGSIGAVIAMLVWLWISSFLVLMGASWNAQVELRTRP 276
>gi|51473680|ref|YP_067437.1| hypothetical protein RT0483 [Rickettsia typhi str. Wilmington]
gi|51459992|gb|AAU03955.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
Length = 281
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 76/272 (27%), Positives = 135/272 (49%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + +Y A+ +++DG + ++S LLS+FPF+VF L FLGA + I
Sbjct: 2 IMRKILNCLYVALFRTIKDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFI 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 QIFLESLPEQATESIEKRIRELLSAPPQSLMNLAIIGSIWTASSFVECLRTILNRVYQIK 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 SPPPYIRRRLLSIIQFLIISALITFTMFLLVVIPIIFTKIPIILETIEQYKIILNFIRYS 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ LF+G ++ LP K + + PG + T + W++ L + YIV ++ + MY
Sbjct: 182 LILILLFLGASSLYYILPNVKLNFVDVFPGAVLTVVLWIISGYLLSTYIVYYNQLNLMYG 241
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 SLGSIIVTLIFFYIINMIFIYGAEFNYLMQNY 273
>gi|323340240|ref|ZP_08080504.1| ribonuclease BN [Lactobacillus ruminis ATCC 25644]
gi|323092431|gb|EFZ35039.1| ribonuclease BN [Lactobacillus ruminis ATCC 25644]
Length = 309
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 61/265 (23%), Positives = 114/265 (43%), Gaps = 3/265 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
A F + + A IS ALL++ P ++F NL L TV+ + A
Sbjct: 18 FFLSAASRFNQANVSNEAIVISYYALLAIIPLMIFIGNLLPLLHLKA--STVLAYIEMAI 75
Query: 71 PEVIAKPITD-EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I + + I + + G +IS L + + +S G A++ SLN AY V +
Sbjct: 76 PRSIYQTLKPFIIQYLENGSSGGAASISGLISIWAASRGFNAMKRSLNVAYGVENSQGML 135
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL +F + V V++ ++ L Y+ F +++ + M+ +
Sbjct: 136 ARRLFAFLFTAFLGVAFVLLFIIYSFGQAVLEYLAPLFNLPMDMIDTFNQVKWPTIMVGI 195
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F ++ ++ F+P AK + I PG +F W+V F+ Y+ F+ Y + +++
Sbjct: 196 FWIMVLLYAFIPNAKLHLRFIWPGALFATCGWMVLTQGFSVYVKYFARTVLSYGTIGTVI 255
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
L +L ++G +NA++
Sbjct: 256 VVLFWLNFTCWVIMVGGIINATLEE 280
>gi|188532198|ref|YP_001905995.1| ribonuclease BN [Erwinia tasmaniensis Et1/99]
gi|188027240|emb|CAO95079.1| tRNA-processing ribonuclease BN [Erwinia tasmaniensis Et1/99]
Length = 290
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 99/279 (35%), Gaps = 8/279 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ + + E+ +A H++ +LLS+ P I L V
Sbjct: 9 HRLRAFWAWMKLLWQRIDEDAMTVLAGHLAYVSLLSLVPLIAVIFALFSAFPMFSDVSVQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + VF + + + + Q +A +K + + + + ++ +LN +R
Sbjct: 69 LKNFVFNNFVPAAGDTVQNYLEQFVANVSK-MTAVGVGGLVVTALLLMYSIDSALNTIWR 127
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RS + + + + L + + + + + + ++
Sbjct: 128 SKVKRSLVYSLAVYWMILTLGPLLAGASLAISSYLLSL------HWATISGVSGLVDMTL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + ++ +P L G + + + +G F YI F +Y +
Sbjct: 182 RIFPLLLSCLSFWLLYSLVPTTPVAGRDALVGAVVGGVLFELGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA + +++Y +LGAE+ A++ Y K+
Sbjct: 242 YGVLAVVPILFLWVYWTWCIVLLGAEITATLADYRRLKQ 280
>gi|227530303|ref|ZP_03960352.1| ribonuclease BN [Lactobacillus vaginalis ATCC 49540]
gi|227349780|gb|EEJ40071.1| ribonuclease BN [Lactobacillus vaginalis ATCC 49540]
Length = 317
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ ++HF + A+ ++ LLS+FP ++ NL +G TV+ +
Sbjct: 25 NLVAMLVKHFTLAQLSSSAATLAYYTLLSIFPALLVIGNLLPMIGLDA--NTVLTYLQTL 82
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I +L L + G+ T AL A + +S G+ A + S+N AY + E ++
Sbjct: 83 VPATVYSFIRPLVLDFLQRGSGGVLTTGALIALWSTSQGIAAFQRSVNHAYGIAENQNPI 142
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ISF ++++ + + ++ F++ L +++ F + + + + T +
Sbjct: 143 SNRVISFIWMIVVVIIIFVIVFLYGVGEQFLKWLQPFLHFNRRYIFLFSSLKWPITFAVI 202
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI L ++ F+P AK + G I W+ + LF Y V FS Y + + +
Sbjct: 203 FIALTMLYYFVPNAKVGLRFAAIGAFLVSIFWLWLSKLFGLYTVLFSHGVIGYKTIGAFI 262
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+V+L G ++GA +NA++ + K
Sbjct: 263 AMMVWLDFSGYLIMMGAAINAALQEAHDGK 292
>gi|119477005|ref|ZP_01617286.1| probable ribonuclease [marine gamma proteobacterium HTCC2143]
gi|119449812|gb|EAW31049.1| probable ribonuclease [marine gamma proteobacterium HTCC2143]
Length = 423
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 99/270 (36%), Gaps = 8/270 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ + H++ + A+ ++ +L ++ P + + + A Q V +
Sbjct: 17 WRYWLKLAVYIQRHYLADGCSHSAAALTYMSLFALVPLLTVMYAILSAVPAFQEVGLQIQ 76
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F + + + + +V A+ L + + ++ + + N ++
Sbjct: 77 SIIFDNFVPSTGQEVETYLKDF-SVQARKLTGVGVGFLGITAILMLKNIEKTFNSIWKTR 135
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + L+ + + L + + + + + + +++ I
Sbjct: 136 DNRRGLSSFLLYWAILSLGPLCIGLALGINTYLVSLKVIFDQ-----VDVIGIGPYILRL 190
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L V +P + I G + T + + V LFT + ++Y +Y
Sbjct: 191 TPYLLTSAAFTLVFAAVPNCRVPIKHAFIGGLVTALVFEVAKQLFTSIVAN-TSYQNIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
A++ L+++Y+ + + GAEL ++
Sbjct: 250 TFAALPLFLLWIYLSWLIVLAGAELVHAIS 279
>gi|254363108|ref|ZP_04979162.1| ribonuclease BN [Mannheimia haemolytica PHL213]
gi|153094995|gb|EDN75558.1| ribonuclease BN [Mannheimia haemolytica PHL213]
Length = 281
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 100/275 (36%), Gaps = 6/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ I + + E + A +++ S +L++ PFIV ++ F +
Sbjct: 2 LNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLFSIFTFFPIFHEANEQLK 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
A + E +++ AK + +S + + ++++ +LN +
Sbjct: 62 AFIYDNFAPSASEMVSEYIELFVSNAKQMGLVSFIGLFVVTIMLIKSIDEALNTIWHDNR 121
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + L+ F +L + + + + L + +
Sbjct: 122 QRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFNGN------GALSLGQHLLELM 175
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L +++ V+ F+P K K G + I + +G F YI F +Y +Y
Sbjct: 176 PFLLIWLLFTLVYKFIPIRKVKFQHAAIGALMAAIFFTLGKKAFIWYITAFPSYQAIYGA 235
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA + L+++ + +LG + A + K
Sbjct: 236 LAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDK 270
>gi|317127299|ref|YP_004093581.1| ribonuclease BN [Bacillus cellulosilyticus DSM 2522]
gi|315472247|gb|ADU28850.1| ribonuclease BN [Bacillus cellulosilyticus DSM 2522]
Length = 261
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 7/265 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ F E +A+ S LLS+FPF++F L FL + I+V+
Sbjct: 2 ELAISLYLRFKEHRLIELAAQCSYYLLLSIFPFLIFILTLFSFLPL--TLEFDINVIQDV 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I + I + ++ + GL + S + + +S + + LNRAY V E R
Sbjct: 60 VPAEIFQFIEGQWTRITSQHNTGLLSFSIIFTIWTASLALNTILRLLNRAYHVTEERKML 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RLIS + +++ + V + F R + L L
Sbjct: 120 KGRLISIFLTIGMFAVVLVALGLQVIGATLKDVLPFDFNIFK-----FNLLRWGISSLVL 174
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI + ++L P + K+ + G IF + W++ +FT Y+ F+ Y+ Y + +++
Sbjct: 175 FIVFMLLYLVGPNIRLKLRDVYIGAIFATLGWLLTTSMFTFYLDNFANYTATYGTIGAVI 234
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
+V+ ++ V +LG E+NA +
Sbjct: 235 ALMVWFHLSSVIILLGGEINAELKE 259
>gi|241896536|ref|ZP_04783832.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
gi|241870258|gb|EER74009.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
Length = 295
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 57/272 (20%), Positives = 122/272 (44%), Gaps = 2/272 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + +I +H+ + A ++ LLS+FP ++ A+L +L T
Sbjct: 6 RKCASQIKHVIQTISKHYQMANVSDSAVVLAYYTLLSLFPALLVIASLLPYLNIQ--TET 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + PE I + I L + G+ +I + A + SS V A + ++N AY
Sbjct: 64 VLESIEPMVPESIFSMLKPSIHSFLNTRSGGVLSIGVIVALWSSSRAVAAFQRTVNGAYG 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ + R+++F +++ L ++ F + L + + ++ I +
Sbjct: 124 VAKNQNALVNRIVAFFWMVALITFLFVLMLFFSLGQIILEQLAPYLHVPHEIIGYINAAK 183
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T L + + L+ + F+P+AK K + PG + + W++ + F+ Y+ F
Sbjct: 184 WPVTFLVVLLVLMILLYFVPSAKLKWRFVWPGALTATVGWLLLSQAFSLYVKYFMHNMDS 243
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y + + + + L + + GA LNA++
Sbjct: 244 YRTIGTFIVLMFCLDFTELILMFGAVLNAAIQ 275
>gi|27376485|ref|NP_768014.1| hypothetical protein bll1374 [Bradyrhizobium japonicum USDA 110]
gi|27349625|dbj|BAC46639.1| bll1374 [Bradyrhizobium japonicum USDA 110]
Length = 297
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 110/279 (39%), Positives = 171/279 (61%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ ++ DA F+ +DGWA+ASHI+LS L+++FPF++ +LAGF G+ +
Sbjct: 2 KAIRYIYVVVMDAFYTFLADDGWAIASHIALSTLMALFPFLIVLTSLAGFFGSKELADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ WP+ +A ++ EI VL G+ TI A + YF+SNGVEALR++LNRAY V
Sbjct: 62 ASLMLEVWPKQVADSLSGEIHDVLTTTRTGVLTIGAALSVYFASNGVEALRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-ALGNLLLIIWNGR 181
VEMR WY RL S GY L+A+ T + M+F+ V PL + R+ P + + I+ R
Sbjct: 122 VEMRRWYWLRLESIGYTLVAAFTALAMAFLIVLGPLIIEATRRHIPLFVESNESILTWLR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYST 240
T+ AL + LI +H ++PA + + ILPG++FT ++ ++ ++F Y+ F+ Y T
Sbjct: 182 YGITIGALVVALIILHAWVPAGRRSFLQILPGIVFTMVASLISGIVFGQYLARFANNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPH 280
>gi|312113317|ref|YP_004010913.1| ribonuclease BN [Rhodomicrobium vannielii ATCC 17100]
gi|311218446|gb|ADP69814.1| ribonuclease BN [Rhodomicrobium vannielii ATCC 17100]
Length = 344
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 111/276 (40%), Gaps = 8/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ + ++ +A+ ++ ALL++FP +VF + G L V + +
Sbjct: 73 LHVLVRVWKSIAADNISLLAAGVAFYALLAIFPGLVFFVAVFGLLAETGQVQNFLLTLKD 132
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEM 125
P + I ++ ++ L + + A + GV AL +LN YR E
Sbjct: 133 VLPTEAWEAINAQVEVLVRQNTTSLSLATMISLGLAFINARLGVYALMSALNGVYRRTET 192
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS+ T ++ + L A L V A+P V ++ R A
Sbjct: 193 RSFAHTNSLAILFTLGALAVLAFNILVVAAVPGIFRLV----GISEFTNAVLHYARWPAL 248
Query: 186 MLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + L V+ + P K + + G + W+ + F+ Y+ F++Y +Y
Sbjct: 249 AIIVALSLAVVYRYGPDRKDAHWRWVSLGSLAATALWLAASTGFSWYVSAFNSYDRIYGS 308
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ L +L++ ++GAEL+ + ++
Sbjct: 309 FGAVVILLYWLWLTAFAALMGAELDMQIQTALEERQ 344
>gi|328880693|emb|CCA53932.1| Ribonuclease BN [Streptomyces venezuelae ATCC 10712]
Length = 323
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 103/262 (39%), Gaps = 6/262 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ +++ A+ ++ A+L++ P ++ +L G GA +I + P
Sbjct: 28 LRLTAVRLWDDNIADCAAALTYYAVLALVPALLVSVSLVGLAGADA-REHLIRDLTSYLP 86
Query: 72 EVIAKPITDEILQVLAVPAK--GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A+ + + + + + P+ L L+A + +S+ + R +L+ +R+ + R
Sbjct: 87 PQSAQVLREALEGLTSAPSSLWALLVSGVLSALWSASSYLAVFRRALHTMHRLPDTRPPL 146
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ LV + VA + G + + R ++ +
Sbjct: 147 RAAHVLVLTAGALLALLVAGAASLVASGPVARQLAAGAGHSGTAAMAV--LRWPVLLVIV 204
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ ++ P PG + W+ + LFT Y F TYS +Y LA ++
Sbjct: 205 TALILLLYRTGPVQARGARRGFPGGALAALLWLGASALFTVY-TQFGTYSRLYGSLAGVV 263
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
LV+L+ + + GA+ NA
Sbjct: 264 VFLVWLWFSNLALLTGAQFNAV 285
>gi|312869802|ref|ZP_07729944.1| YihY family protein [Lactobacillus oris PB013-T2-3]
gi|311094648|gb|EFQ52950.1| YihY family protein [Lactobacillus oris PB013-T2-3]
Length = 302
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/277 (22%), Positives = 125/277 (45%), Gaps = 2/277 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + + + HF + A+ ++ LLS+FP ++ NL +G
Sbjct: 1 MKNEPGKLKNFVLLLMRHFTMAQISSSAAMLAYYTLLSIFPAVLVIGNLLPMVGLDA--D 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + I I L + GL T AL A + +S G+ A + S+N Y
Sbjct: 59 TVLSYLQTAVPSSVYVFIKPLIYDFLRQGSGGLLTTGALIALWSTSQGIAAFQRSVNLTY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V ++ I R++SF ++++ + + + ++ L ++ + + +
Sbjct: 119 DVARNQNPVINRVVSFIWMIVVIILIYAIVLLYGFGEQVLNSIQPLLQFNRRYISLFNSL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LFI L ++ F+P AK ++ G + + W+ + LF++Y V F
Sbjct: 179 RWPVALAVLFIALTLLYYFVPNAKVRLRYAATGALLAALLWMGLSRLFSYYTVFFRHSVV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L + G +LGA LNA++ +
Sbjct: 239 SYKTIGAFIAMMIWLDLSGYVIMLGAVLNATLQEAHE 275
>gi|326316310|ref|YP_004233982.1| ribonuclease BN [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373146|gb|ADX45415.1| ribonuclease BN [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 421
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/258 (19%), Positives = 99/258 (38%), Gaps = 8/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT--VIDVVFGAWPEVI 74
E F E+ AS ++ + LL++ PF + + + T +V P+ I
Sbjct: 31 ERFREDRLGLTASSLTFTTLLALVPFFTVALAIFTAFPIFRTLQTGLQRWLVDSLVPDSI 90
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ + + Q A A GL + + + +LN +RV +R LI
Sbjct: 91 SRQVLGYLTQF-AAKASGLGVAGFSILLATALALILTIDRTLNNIWRVPRLRPLGQRVLI 149
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + ++ + + G L L L G
Sbjct: 150 YWAVITLGPLVLAASLALTTSVASSASR-----GLEGALPDSARLLFDSIEFLLLAGGTA 204
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + + G +F + V + YI + TYS +Y A++ LV+
Sbjct: 205 ALYRYVPNTQVRWRHAWSGGVFVSVGIEVAKKVLGLYIASVPTYSVLYGAFATLPILLVW 264
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 265 IYVAWVIVLLGAVVAAYL 282
>gi|28896899|ref|NP_796504.1| ribonuclease BN [Vibrio parahaemolyticus RIMD 2210633]
gi|153838812|ref|ZP_01991479.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AQ3810]
gi|260365914|ref|ZP_05778408.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus K5030]
gi|260877799|ref|ZP_05890154.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AN-5034]
gi|260895552|ref|ZP_05904048.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus Peru-466]
gi|260902576|ref|ZP_05910971.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AQ4037]
gi|32699634|sp|Q87TE5|Y125_VIBPA RecName: Full=UPF0761 membrane protein VP0125
gi|28805107|dbj|BAC58388.1| ribonuclease BN [Vibrio parahaemolyticus RIMD 2210633]
gi|149747742|gb|EDM58638.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AQ3810]
gi|308088600|gb|EFO38295.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus Peru-466]
gi|308090086|gb|EFO39781.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AN-5034]
gi|308109704|gb|EFO47244.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus AQ4037]
gi|308113465|gb|EFO51005.1| tRNA-processing ribonuclease BN [Vibrio parahaemolyticus K5030]
gi|328471674|gb|EGF42551.1| hypothetical protein VP10329_00925 [Vibrio parahaemolyticus 10329]
Length = 314
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 91/266 (34%), Gaps = 8/266 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGA 69
++ + A +++ LLS+ P + ++ V V+ +
Sbjct: 22 FFKYLLKRLTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSKFPVFANVGEVLQGYIIEN 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + + +A + + + + + +LN +RV + R
Sbjct: 82 FVPASGEAVHTALQEFVAN-TGKMSAVGGGFLFIAALMLISNIDKNLNYIWRVKDKRRLV 140
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + + L + + + L + +L
Sbjct: 141 FSFSMYWMVLTLGPILVGASIAATSYVTSL------QILENETLSGAFNLFLRWLPLLLS 194
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F + +++ +P K + G I + + F YI F +Y +Y LA+I
Sbjct: 195 FFAFLGLYILVPNKKVHLAHGAVGAAVAAILFELSKKGFALYITQFPSYQLIYGALAAIP 254
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
V++Y+ + +LGAE+ A++
Sbjct: 255 ILFVWVYLCWMIVLLGAEVTAALGEQ 280
>gi|294634258|ref|ZP_06712800.1| YihY family protein [Edwardsiella tarda ATCC 23685]
gi|291092298|gb|EFE24859.1| YihY family protein [Edwardsiella tarda ATCC 23685]
Length = 292
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 99/279 (35%), Gaps = 8/279 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PT 61
++ F E+ +A ++ +LLS+ P + +L V
Sbjct: 7 KHLKGGFCFAQILWRRVDEDRMTMVAGSLAYVSLLSLVPLVTVVFSLFTAFPMFASVSDQ 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + + + Q +A +K + + + + + ++ +LN +R
Sbjct: 67 LKHFIFTNFVPAAGDVVQSYLEQFVANSSK-MTALGIIGLIVTALLLISSVDGALNHIWR 125
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R+ + + + + L + + + + + A + ++
Sbjct: 126 SERKRAIVYSFAVYWMILTLGPLLVGASMGISTYLLSL------RWLADSRVYSLVDQLL 179
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + ++ +P + + L G + + +G F YI F +Y +
Sbjct: 180 RLFPLLLSCVSFWLLYCIVPTQRVPLRDALIGALVAGGLFELGKKAFALYITAFPSYQLI 239
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I V++Y +LGAE+ ++ + ++
Sbjct: 240 YGVLAVIPMLFVWVYWSWCIVLLGAEITVAIGDFRTHRQ 278
>gi|192292202|ref|YP_001992807.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
gi|192285951|gb|ACF02332.1| ribonuclease BN [Rhodopseudomonas palustris TIE-1]
Length = 310
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 111/268 (41%), Gaps = 11/268 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ F + AS ++ LL P + +L G V ++ G
Sbjct: 27 IVLRVGRQFFRDGLSTAASSVAFYILLGSVPGLAAVISLYGLFADPHDVGSLSRATAGIV 86
Query: 71 PEVIAKPITDEILQVLAVPAKGL------FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P IAK + +I ++ + G + + + ++ G++ +LN Y VE
Sbjct: 87 PTDIAKLLGQQIDRLAEQDSSGSHGPSLDYLVWIALLLWSANRGIKGFSDALNIIYNRVE 146
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+W + ++ + A LV + +P+ LA + P+ + + R
Sbjct: 147 ERTWLLRTGVTLLITVGAIGFLVFTLAAVLVLPIVLAAL----PSENTIATLTGWLRWPI 202
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + ++ + P+ K S SIL G + W+V ++ F Y + +S +Y
Sbjct: 203 MLVLTTLAIMILLRCGPSRKESHWPSILRGSLIGAALWIVVSLGFAWYAQNIANFSALYG 262
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
L S++ + +L++ + ++GAE +A+
Sbjct: 263 SLGSVIAFMTWLWLSALAVLVGAEFDAA 290
>gi|34580425|ref|ZP_00141905.1| hypothetical protein [Rickettsia sibirica 246]
gi|28261810|gb|EAA25314.1| unknown [Rickettsia sibirica 246]
Length = 275
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 137/270 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S LLS+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFRTIEDDGVEHSGYMSFMILLSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RL+S L+ S + F+ V IP+ + + +I+ R +
Sbjct: 122 PPYIRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFIRYFLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I W++ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASSLYYILPNVKLNFIDVFPGALLTVILWIISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
SI+ L+F Y++ + FI GAE N M Y
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNY 271
>gi|90407862|ref|ZP_01216038.1| ribonuclease BN [Psychromonas sp. CNPT3]
gi|90311037|gb|EAS39146.1| ribonuclease BN [Psychromonas sp. CNPT3]
Length = 293
Score = 128 bits (321), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 95/270 (35%), Gaps = 8/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + +++ A H++ LLS+ P + + + +I+ +
Sbjct: 15 RYLLFLYQRCHQDNIKVPAGHLAYVTLLSIVPCLAVIFYMLSAFPMFSDLNKIIEDLIYN 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + K + + + + + + ++NR +R RSW
Sbjct: 75 NFLPTSGDALKVHMSGFIENTKKMSMMGIASLMVIALLLISTIDQTINRIWRCSTKRSWV 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I + + L + L + + + L + + +
Sbjct: 135 QAFTIYWTILSLGPIILGGSIALSSYLFAIVQQ--------RGFLSVGQQLLSFMPFIVS 186
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ V+ +P K + L G + + +G LF+ YI+ F + +Y LA I
Sbjct: 187 WLAFSGVYALVPRQKVNVRYALIGGFSSAVLLNLGTDLFSLYIINFPSQQIIYGALAVIP 246
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V++Y + + GAE+ S+ ++ ++
Sbjct: 247 ILFVWIYFNWLIVLFGAEITVSIDEFFEKE 276
>gi|270290818|ref|ZP_06197042.1| ribonuclease BN family enzyme [Pediococcus acidilactici 7_4]
gi|270280878|gb|EFA26712.1| ribonuclease BN family enzyme [Pediococcus acidilactici 7_4]
Length = 300
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 60/278 (21%), Positives = 123/278 (44%), Gaps = 2/278 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + ++ F E + + ++ LLS FP ++ L V T
Sbjct: 4 KVFLRKSETFLKALLKRFNEAEVVNNSIVLAYYLLLSFFPLVMLLGTLLPLF--QIRVNT 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V++ + A PE I + L LF+ S + + +S V A + ++NRAY
Sbjct: 62 VLEYIETAVPETIYNITEPIVKDFLGSGNGELFSFSLVMTVFSASQAVAAFQRTVNRAYG 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ I R++SF ++ + ++ F+F ++Y+ +L ++ +
Sbjct: 122 VAKYQNPIINRVVSFFLTVVIIAIMAVLVFLFSFGQTLVSYLTPILNLPTHLFALVGQLK 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
T++ LF+GL ++ +P AK + ++PG +F I +V + +F+ Y+ F+ T
Sbjct: 182 WPVTIVGLFVGLSLLYYLVPNAKIRFKYVIPGTVFATIGTMVLSQVFSFYLRIFARSVTS 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + + +L + + G LNA+ K
Sbjct: 242 YKTLGTFIAIMFWLNFSAMIIMFGGVLNATWQELREGK 279
>gi|163745189|ref|ZP_02152549.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
gi|161382007|gb|EDQ06416.1| ribonuclease BN, putative [Oceanibulbus indolifex HEL-45]
Length = 309
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 117/273 (42%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I +D +++ ++ +++ ++ A+LS+FP + L G + V ++ V
Sbjct: 12 IYWDAFKASLKQAASDNLALISAGVAFFAMLSLFPALAALIALLGLISDPVVVIAQLEDV 71
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYRVV 123
G P+ + I ++ ++ A L L A + + GV A+ I LN Y
Sbjct: 72 RGLLPDDVYDIINTQVTGLVTARADTLGWAGIVSLLVALWSARAGVGAMVIGLNSVYNE- 130
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R+ L + + ++ V P+ LA++ P + R
Sbjct: 131 RNRNAAKHYLHALLLTVSLVAVGIVALLAVVVAPIILAFI----PLGPFGNAVADLLRWT 186
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ LF G+ ++ F P ++ ++ + G I +SW V ++ F++Y+ F Y+ +Y
Sbjct: 187 VATVVLFAGVGVLYRFGPNRRAARLPWLSSGAILAVLSWAVISIGFSYYVANFGNYNQVY 246
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++ LV+L++ + GA LNA +
Sbjct: 247 GSIGAVIAMLVWLWISSFLILFGAALNAQVERR 279
>gi|319792501|ref|YP_004154141.1| ribonuclease bn [Variovorax paradoxus EPS]
gi|315594964|gb|ADU36030.1| ribonuclease BN [Variovorax paradoxus EPS]
Length = 403
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 48/258 (18%), Positives = 96/258 (37%), Gaps = 11/258 (4%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT--VIDVVFGAWPEVI 74
E F E+ AS ++ + +++ PF L + ++ PE I
Sbjct: 28 ERFREDRLGLTASSLTFTTTIAMVPFFTVALALFTVFPMFAKMQGRLQRWLIESLIPENI 87
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q A A GL + + + + +LN +RV R + LI
Sbjct: 88 ARQVLGYLNQF-ASKASGLGIAGLIVLLITAIALILTIDKTLNNIWRVRTPRPFAQRVLI 146
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + + A + V ++ L +G+
Sbjct: 147 YWAAITLGPLILAVSLSTTSYVVSATSDVVGR--------GMVKLFFDTFEFALLAVGMA 198
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P + G IF + + + +Y+ TYS +Y A+ LV+
Sbjct: 199 SLYHYVPNTNVRWSHAWAGGIFVAAAIEIAKRVLAYYLSLVPTYSVLYGAFATFPILLVW 258
Query: 255 LYMLGVFFILGAELNASM 272
+Y+ V +LGA + A +
Sbjct: 259 IYVAWVIVLLGAVIAAYL 276
>gi|168830331|gb|ACA34427.1| Rbn [uncultured bacterium pTW3]
Length = 425
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 39/258 (15%), Positives = 92/258 (35%), Gaps = 8/258 (3%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEVIAKPIT 79
++ + A +S + + ++ P + + + + + VF + A+ +
Sbjct: 33 DDRLFEAAGALSYTTVFALVPLSMVAFGVLSGFPVFEKWGDRLTRYVFDNFVPSSARALE 92
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + LA L + +A + ++ + NR +RV R + L+ + +
Sbjct: 93 RYLAEFLAN-TGQLTAVGVIALVISVLITLTSVEAAFNRIWRVKTTRPRFGRFLVYWTVL 151
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
L ++ + + + AL L+ A M +
Sbjct: 152 TLGALGAAASLALSTQFFALAVFQTEPGRALEALM------LRLAPMTIELAAFATIFRM 205
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
+P + G + + + + Y+ +F +Y +Y LA+ L+++Y
Sbjct: 206 VPHRTVHWRHAVAGAVLSVALFELLRWGLGLYLGSFGSYQKIYGKLAAAPILLLWIYFGW 265
Query: 260 VFFILGAELNASMIIYYW 277
V +LGA ASM + +
Sbjct: 266 VSILLGASFAASMSAFRY 283
>gi|319899464|ref|YP_004159561.1| ribonuclease RNAse bn transmembrane protein [Bartonella
clarridgeiae 73]
gi|319403432|emb|CBI77000.1| ribonuclease RNAse bn transmembrane protein [Bartonella
clarridgeiae 73]
Length = 284
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 108/280 (38%), Positives = 175/280 (62%), Gaps = 1/280 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ F + I +A+ H++ ++G A ASH++LS LL+ FPF +FG +LA FLGA ++ P
Sbjct: 2 IKKAFWYSYRIFVNAVSHYLRDNGNAFASHVALSGLLAFFPFFIFGTSLASFLGAFKYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ + P+ IA+P++ EI+ VL L T+S + AAYF+SNGV ALRI+LN+AY
Sbjct: 62 QKIEALVQLLPDAIAEPLSKEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRIALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV++ RS + R S +V++ +V LV +SF+ V PL + ++ + + + II
Sbjct: 122 RVIDRRSLFFCRFQSLFFVIIGTVGLVAISFLLVLAPLLIKIMQNYSSHITEYIGIIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ L L+ VH +LPA + K++ ILPG++ T W + ++ F Y+ F Y++
Sbjct: 182 RYIIAIVVLLTSLLIVHKWLPAGQRKLIDILPGILVTIFVWFLTSIAFAQYLTMF-NYTS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGL SIM ++FLY+L FILG E+NA+++ Y +
Sbjct: 241 TYAGLTSIMVAIIFLYILSAIFILGGEINAAIMFYRDHSQ 280
>gi|110598225|ref|ZP_01386501.1| ribonuclease BN, putative [Chlorobium ferrooxidans DSM 13031]
gi|110340140|gb|EAT58639.1| ribonuclease BN, putative [Chlorobium ferrooxidans DSM 13031]
Length = 429
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/263 (14%), Positives = 91/263 (34%), Gaps = 7/263 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I ++ + + + A ++ LLS+ PF+ ++ + I+
Sbjct: 24 GYLRAFIPFFWKNLIHDRIFLGAGSLAFQTLLSIVPFLAVVLSILSVFAVFTPLKHNIEE 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A I + L + + L + + + + +LN + V
Sbjct: 84 FLVQNFMPGAGGILNHYLNDFIGKTATVPLLGGLFLFIIALSLISTIDHTLNEIWEVHSP 143
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + + + L V + A +YV G +L + Y
Sbjct: 144 RKMFQGFTLYWTVLTLGPVLIGSSLA-------AGSYVWYTVFTEGPMLEVKTRLLSYLP 196
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + +++ +P + + + + G + + + F+ YI +T+ +Y L
Sbjct: 197 FINSVVAFFLLYMLVPNCRVRFLHAISGAFAAAVLFELSKKWFSFYIANVATFEHIYGAL 256
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
+ I ++Y+ V + GAE
Sbjct: 257 SVIPMLFFWIYLGWVVVLTGAEF 279
>gi|323528502|ref|YP_004230654.1| ribonuclease BN [Burkholderia sp. CCGE1001]
gi|323385504|gb|ADX57594.1| ribonuclease BN [Burkholderia sp. CCGE1001]
Length = 443
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 104/269 (38%), Gaps = 5/269 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A+ F ++ AMA+ I+ A S+ P +V +AG F GA + D + G +
Sbjct: 25 ALRKFSDDRCSAMAASIAFYAAFSLAPTLVMVIAVAGWFFGAEAARGELFDHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + + + G IS A +S +L +LN + R+ +
Sbjct: 85 AAAGVQTIVENAHHSGSAGGIAAIISFTMLAIGASATFSSLNSALNVVWPYSGPRTSSVI 144
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + + ++ K+ ++I ++ +L L
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVLDTVITFIGKWLWGDSPYVVIGNLLQLGVGLLVLA 204
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A + L G + + + G LF Y+ S+ + S+
Sbjct: 205 FAFAGLLKFLPDASVRWRDALVGGVVAAVLFSAGKKLFALYLAHAGMASS-FGAAGSLAV 263
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY +LGAE +A+ +
Sbjct: 264 LLMWLYFSAAVLLLGAEFSAARGRLNDPR 292
>gi|317504378|ref|ZP_07962362.1| YihY family protein [Prevotella salivae DSM 15606]
gi|315664500|gb|EFV04183.1| YihY family protein [Prevotella salivae DSM 15606]
Length = 439
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 98/267 (36%), Gaps = 4/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ V IY A++ F+E A+ +S S +L++ P + G Q++ T
Sbjct: 27 KSIGMNVIRKIYMAVKLFIERGHVDYATQLSFSTILAIVPIFALIFAIGRGFGLSQYIET 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ G+ PE I + I L Y + + + N ++
Sbjct: 87 WLRTSLGSQPEAANSIIALADSYLQHAQTGLFIGIGLLFMLYSVLSLIYNVESVFNIIWQ 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS + + L V +++MS V + + L I
Sbjct: 147 VNTKRSIGRFLSDNLAMMFLVPVIIIVMSGVSI----IANTTTEHLQTFFLLGPIARVVV 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + + + +P + K +++ I I+ ++ + H + S Y+ +
Sbjct: 203 SLLPFVVLTLIFVALFMVMPNTRVKFTAVVGPAILAAIAMLLVQWGYVHGQLFLSGYNAV 262
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y LA++ ++++ + + AEL
Sbjct: 263 YGSLAALPLFMLWMQISWYICLFCAEL 289
>gi|189499966|ref|YP_001959436.1| ribonuclease BN [Chlorobium phaeobacteroides BS1]
gi|288559216|sp|B3EQ23|Y1013_CHLPB RecName: Full=UPF0761 membrane protein Cphamn1_1013
gi|189495407|gb|ACE03955.1| ribonuclease BN [Chlorobium phaeobacteroides BS1]
Length = 427
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 101/281 (35%), Gaps = 9/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + ++F+++ A ++ LLS+ P + ++ +
Sbjct: 16 LSALLSYLRSFLPFMWKNFMQDRVLLSAGSLAFQTLLSLIPLMAVVLSVLSVSPVFETFK 75
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+D +F + I + + + A + T+ + + + + ++N+
Sbjct: 76 RYVDDFLFQNFVPASGSMIREYFWEFIGNTAT-VPTVGGIFLLIIALFLISTIDHTINQI 134
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V R + + + L + + A +YV G L +
Sbjct: 135 WDVRAPRKILQGFTLYWTVLTLGPIIIGSGLV-------ASSYVWYTVFTEGPFLELRTR 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
Y ++ F+ +++ +P + + + + G + + F+ Y+ TF+T+
Sbjct: 188 ILSYLPLVNSFLAFFLLYMLVPNHRVRFLHAVSGAFLATWLFELSKQWFSFYVKTFATFE 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y L+ I ++Y++ V + GAE + K
Sbjct: 248 HIYGALSVIPLLFFWIYLIWVVALSGAEFVYCLGAVRQEVK 288
>gi|157825789|ref|YP_001493509.1| ribonuclease BN, putative [Rickettsia akari str. Hartford]
gi|157799747|gb|ABV75001.1| Ribonuclease BN, putative [Rickettsia akari str. Hartford]
Length = 275
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 79/274 (28%), Positives = 138/274 (50%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F+ +Y A+ +E+DG + ++S L+S+FPF+VF L FLGA + I +
Sbjct: 2 RKIFNCLYVALFKTIEDDGVEHSGYMSFMILVSIFPFLVFLLALTSFLGASELGQNFIQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + I I ++L+ P + L ++ + + + +S+ VE LR LNR Y++
Sbjct: 62 FLESLPEQATESIEKRIRELLSAPPQSLMNLAIVGSIWTASSFVECLRTILNRVYQIKSP 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ RL+S L+ S + F+ V IP+ + + +I+ R
Sbjct: 122 PTYVRRRLLSIIQFLIISALITFTMFLLVVIPILFTKIPIILETIEKYKIILNFTRYSLI 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ LF+G ++ LP K + + PG + T I WV+ L + YIV ++ + MY L
Sbjct: 182 LILLFLGASALYYILPNVKLNFIDVFPGALLTVILWVISGYLLSTYIVYYNQLNLMYGSL 241
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
SI+ L+F Y++ + FI GAE N M Y +
Sbjct: 242 GSIIVTLIFFYIINMIFIYGAEFNYLMKNYKNIE 275
>gi|117620120|ref|YP_854807.1| ribonuclease BN [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
gi|117561527|gb|ABK38475.1| YihY family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 290
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 89/269 (33%), Gaps = 6/269 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
F ++ A +++ LLS+ P I + Q + ++
Sbjct: 22 HFAQFVWGRFQQDRLTVTAGYLAYVTLLSLVPMIAVVFGMMSAFPVFQSLKQAMEQFVYH 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + E + A + A + + A+ +LN +R + R
Sbjct: 82 NFVPTAGEMLKEYIDGFVANATNTTAVGIGALIVVALMLISAIDKNLNYIWRSTQSRPLA 141
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L V + + I +L I + L
Sbjct: 142 QAFAMYWMILTLGPVLIGASIAISSYIFSL------RLFGAESLFGIGYLLLRGLPFLFS 195
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + V+ +P K ++M G + + + F YI F +Y +Y LA+I
Sbjct: 196 VLTFLLVYTVVPNCKVRLMHAFIGALVAATLFELAKRGFAIYITNFPSYQAIYGALATIP 255
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
V++Y+ + +LGAE A + Y
Sbjct: 256 ILFVWVYLSWLVVLLGAETTACLGEYERP 284
>gi|217976474|ref|YP_002360621.1| ribonuclease BN [Methylocella silvestris BL2]
gi|217501850|gb|ACK49259.1| ribonuclease BN [Methylocella silvestris BL2]
Length = 288
Score = 127 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 118/265 (44%), Positives = 163/265 (61%), Gaps = 1/265 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F ++YDA +FV++DGWA++SHI+LS L S+FPF++F LAGFLG+ + +
Sbjct: 2 RFMFHVLYDAAMNFVQDDGWAISSHIALSILTSMFPFLIFVTALAGFLGSADLSQEAVQI 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+F WPE +AKP+ E+ VL GL T+ + + YFSS+GVEALRI+LNRAY V E
Sbjct: 62 LFQTWPEQVAKPLASEVHNVLTQTRGGLVTLGGVLSIYFSSSGVEALRIALNRAYGVAET 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R WY+ RL S GYV++ +V L+ ++ V PL F P L L ++ R
Sbjct: 122 RPWYVLRLESIGYVMIGAVALLTLTLSVVFAPLIWTIALHFAPHLEPLDRLVTFSRFGIA 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAG 244
L L + L+ VH FLPA + + I PG++FT+ WV G +F Y+ F+ Y T YAG
Sbjct: 182 TLVLLLALVIVHKFLPAGRRTLWQIFPGIVFTFALWVAGGAIFGSYLAEFARNYVTTYAG 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
LAS+M LVFLYM+ FI G ELN
Sbjct: 242 LASVMIALVFLYMISSIFIAGGELN 266
>gi|145300965|ref|YP_001143806.1| ribonuclease BN [Aeromonas salmonicida subsp. salmonicida A449]
gi|288559238|sp|A4ST36|Y4118_AERS4 RecName: Full=UPF0761 membrane protein ASA_4118
gi|142853737|gb|ABO92058.1| ribonuclease BN [Aeromonas salmonicida subsp. salmonicida A449]
Length = 290
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 88/269 (32%), Gaps = 6/269 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
F + A +++ LLS+ P I + Q + ++
Sbjct: 22 HFAQFVWSRFQHDRLTVTAGYLAYVTLLSLVPMIAVVFGMMSAFPVFQTLKQAMEQFVYH 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + E + A + A + + A+ +LN +R + R
Sbjct: 82 NFVPTAGEMLKEYIDGFVANATNTTAVGIGALIVVALMLISAIDKNLNYIWRSTQGRPLA 141
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L V + + I +L I + L
Sbjct: 142 QAFAMYWMILTLGPVLIGGSIAISSYIFSL------RLFGAESLFGIGYLLLRSLPFLFS 195
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + V+ +P K +++ G + + + F YI F +Y +Y LA+I
Sbjct: 196 VLTFLLVYTVVPNCKVRLVHAFIGALVAATLFELAKRGFAIYITNFPSYQAIYGALATIP 255
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
V++Y+ + +LGAE A + Y
Sbjct: 256 VLFVWVYLSWLVVLLGAETTACLGEYEKP 284
>gi|302386605|ref|YP_003822427.1| ribonuclease BN [Clostridium saccharolyticum WM1]
gi|302197233|gb|ADL04804.1| ribonuclease BN [Clostridium saccharolyticum WM1]
Length = 278
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 55/264 (20%), Positives = 116/264 (43%), Gaps = 4/264 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + +++ A+ S ++++ FPF++ L + + ++ ++ P
Sbjct: 9 KQIYDKYSKDEMTVYAAQASFFSIIAAFPFMMLLLALIQLIPS-ITKANLLQLIITIIPS 67
Query: 73 --VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I I I + + +++A AA + +S G+ ++ LNR Y + R++++
Sbjct: 68 TLEINSVIVTVIDDLYTNSPVAVLSVTAAAAVWSASRGMLSIERGLNRVYGHEKKRNYFV 127
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
TR+I GY ++ V ++ + V ++ + FP L + + R + L
Sbjct: 128 TRIICAGYTIVFMVICLLTLVLLVLGSSIQGFMNRHFPLLAEITQSVLTFR-TMLVFMLT 186
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ ++P K + LPG F + W+ + F+ Y F YS MY L +I+
Sbjct: 187 ACFAVLYTYVPEKKQEFYKQLPGAAFCTLGWIAFSFAFSIYFNNFGNYSVMYGSLTAIVL 246
Query: 251 CLVFLYMLGVFFILGAELNASMII 274
++++Y LGAE+N I
Sbjct: 247 LMLWIYSCICILFLGAEINYYYSI 270
>gi|109900253|ref|YP_663508.1| ribonuclease BN [Pseudoalteromonas atlantica T6c]
gi|123170559|sp|Q15NT4|Y3954_PSEA6 RecName: Full=UPF0761 membrane protein Patl_3954
gi|109702534|gb|ABG42454.1| tRNA-processing RNAse BN [Pseudoalteromonas atlantica T6c]
Length = 300
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 103/280 (36%), Gaps = 8/280 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFV 59
+R + + + H + A H++ +LLS+ PFI+ + A +
Sbjct: 11 LRSWLPKANIFVRMFVNHCQRDGITVSAGHLAYVSLLSLVPFIMVFFTILSAFPAFSEVR 70
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ ++FG + I + + + +K + I L+ + + + +LNR
Sbjct: 71 GDIEALIFGNFIPTSGDQIQGYVAEFVGNASK-MGAIGILSLVVVALLLISNIDKTLNRI 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
++ R T I + + L + + + + + + +
Sbjct: 130 WQAKSERPIIFTFAIYWMILTLGPLLIGLSVIMSSYLVAFANSAEAY------TMGATTA 183
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+A +++ +P + L G + + + F+ YI F +Y
Sbjct: 184 MLKIVPFIASVCAFFILYMIVPNKRINPRHALVGAFMGALLFELSKKGFSFYITHFPSYQ 243
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y +A I V++Y+ + +LGAEL + +++ +
Sbjct: 244 MIYGAMAVIPILFVWVYLSWIVVLLGAELTHVIEVFFHEE 283
>gi|240948865|ref|ZP_04753221.1| ribonuclease BN [Actinobacillus minor NM305]
gi|240296680|gb|EER47291.1| ribonuclease BN [Actinobacillus minor NM305]
Length = 284
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 105/281 (37%), Gaps = 11/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFV 59
M+ + F + I+ + A +++ + +L++ P I+ ++ +
Sbjct: 1 MKYTLLLFFRVF---IKRAEQNQLPVTAGYLTYNTMLAMVPLIMVVFSVFTIFPFFTEAT 57
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ ++ + I + + + +K + +S + + + + +LN
Sbjct: 58 EQLKSFIYDNFAPNIGDVVQQNLDSFVNN-SKQMGIVSTIGLVVVALMLIHNVDKALNGL 116
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ RS +I+ L+ ++LA + + + I + +
Sbjct: 117 WHEPRKRSIFISFLLYAVILVLAPLVAGVSIAITSYIMSLSLFNE------VATFSLTTT 170
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
Y L +++ ++ F+P K G +F I + +G F YI TF +Y
Sbjct: 171 LLNYTPFLLIWLLFTLIYKFVPNTPVKFKHACMGALFAGIFFTLGKQAFIWYITTFPSYQ 230
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA + L+++++ +LG + A + K+
Sbjct: 231 AIYGALAVLPIMLLWIHLSWQVVLLGGQFAAVLKELEMIKQ 271
>gi|284037261|ref|YP_003387191.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283816554|gb|ADB38392.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 321
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 54/286 (18%), Positives = 112/286 (39%), Gaps = 10/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
++ +F + +I DA F+ + +++ ++ + S+ P +V ++ FLG
Sbjct: 6 LKLFFTNAWIVIRDAFNGFLNDRCLKLSAALAYYTVFSLAPLLVLIISVVSIFLGQDAIQ 65
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + G AK I D I V + I + +++ ++ S+N
Sbjct: 66 GQIFSQINGLVGNEAAKQIQDMIKSVSLSGKTNTALAIGIITLVIGATSIFVEIQDSVNM 125
Query: 119 AYRVVEMRSWYITRLI-----SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+RV +LI S V+ L++ + I ++ ++ P +G
Sbjct: 126 IWRVKAKPKRGWLKLIKDRLLSSSLVVSLGFLLLVSLIINGIILAMSDFLSRYLPGIG-- 183
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ ++ + + + + LP AK + G FT + +++G L YI
Sbjct: 184 VYLVSGFNFLISTAVVSVLFAIIFKVLPDAKISWRDVRWGAFFTALLFMLGRYLIGLYIE 243
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T ST S+ Y S++ L ++Y GAE + ++ K
Sbjct: 244 TTST-SSAYGAAGSLIVILTWIYYTAAILYFGAEFTQAYANHFGIK 288
>gi|330827853|ref|YP_004390805.1| YihY family protein [Aeromonas veronii B565]
gi|328802989|gb|AEB48188.1| YihY family protein [Aeromonas veronii B565]
Length = 290
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 89/269 (33%), Gaps = 6/269 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
F ++ A +++ LLS+ P I + Q + ++
Sbjct: 22 HFAQFVWGRFQQDRLTVTAGYLAYVTLLSLVPMIAVVFGMMSAFPVFQSLKQAMEQFVYH 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + E + A + A + + A+ +LN +R + R
Sbjct: 82 NFVPTAGDMLKEYIDGFVANATNTTAVGIGALVVVALMLISAIDKNLNYIWRSTQGRPLA 141
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L V + + I +L I + L
Sbjct: 142 QAFAMYWMILTLGPVLIGASIAISSYIFSL------RLFGAESLFGIGYLLLRGLPFLFS 195
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + V+ +P K +++ G + + + F YI F +Y +Y LA+I
Sbjct: 196 VLTFLLVYTVVPNCKVRLIHAFIGALVAATLFELAKRGFAIYITNFPSYQAIYGALATIP 255
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
V++Y+ + +LGAE A + Y
Sbjct: 256 ILFVWVYLSWLVVLLGAETTACLGEYEKP 284
>gi|255035378|ref|YP_003085999.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
gi|254948134|gb|ACT92834.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
Length = 424
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 96/281 (34%), Gaps = 6/281 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
F ++ ++ F ++ +++ +S + S+ P ++ ++ F G F +
Sbjct: 3 RLKDFFTLMKESFSEFSNDNVLKLSAALSYYTIFSLAPMLLLIISIVSFFFGREAFEGEL 62
Query: 63 IDVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ G + I I + + I + ++ ++ S+N +
Sbjct: 63 YGQIQGLVGKEAGAQIQQLIKNAAINDKSTTAAIIGGVTLLIGATGVFAEIQDSINYIWA 122
Query: 122 VV-EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIW 178
+ + R ++ L + +TL + V + + + + +++
Sbjct: 123 IKSKPRKGWVQYLKNRLLSFSLIITLGFLLVVTLGVNTLVDLLSARLERYFSEVSVVVFS 182
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ + V LP + L G FT + + +G + Y+ S
Sbjct: 183 VLNVALVLVIIAALFAVVFKVLPDGHVRWKECLIGAGFTSLLFAIGKFAISFYLGQ-SDL 241
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y ASI+ L ++Y + GAE Y +
Sbjct: 242 GATYGASASIVILLTWIYYSSIILYFGAEFTKVFARYDGHE 282
>gi|154494809|ref|ZP_02033814.1| hypothetical protein PARMER_03851 [Parabacteroides merdae ATCC
43184]
gi|154085359|gb|EDN84404.1| hypothetical protein PARMER_03851 [Parabacteroides merdae ATCC
43184]
Length = 414
Score = 127 bits (319), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 103/271 (38%), Gaps = 3/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + + I A+ F E+ AS ++ S LLS+ P + +A G V
Sbjct: 1 MKELYINIIKTIILAVRGFQNENLQTKASALTYSTLLSIVPLLAVLLGIAKGFGFQNTVR 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ F + K + + + + Y N + ++ + N +
Sbjct: 61 QELFDYFPGHEVELTKAFEFVESYLEQAQGGVIIGVGLILLFYTVVNLISSIEDTFNDIW 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ + R WY L+ V + S + + + + L+ +I N
Sbjct: 121 QIQKSRPWYRKLSDYLALFLILPVLMTASSGLSIFLSTLQNSFISQYFFFTPLVELILNI 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L + +++ LP K + ++ L I + I++ ++ + S Y+
Sbjct: 181 T---PYLITILAFTGLYISLPNTKVRFVNGLVAGILSGIAFQFFQFIYISGQIWVSKYNA 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A++ L++L + + + GAE++ +
Sbjct: 238 IYGSFAALPLLLLWLQLSWLICLFGAEISYA 268
>gi|91787709|ref|YP_548661.1| ribonuclease BN [Polaromonas sp. JS666]
gi|91696934|gb|ABE43763.1| tRNA-processing RNAse BN [Polaromonas sp. JS666]
Length = 404
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 9/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI--DVVFGAWPEVI 74
+ F E+ AS ++ + +++ PF + + + +V P+ I
Sbjct: 28 DRFREDHMGLTASSLTFTTSIALVPFFTVALAIFTAFPMFAKLQGALQAWLVQSLIPDDI 87
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A+ + + Q + A L + + + +LN +RV + R LI
Sbjct: 88 ARQVLGYLTQF-SRQANKLGIAGLAVLLVTAIALILTIDRTLNGIWRVRKARPLAQRVLI 146
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + L + A + P + + G+
Sbjct: 147 YWAAITLGPLLLAASLAGTSYVLSASRGLVGVMPIS------LRFLLDVTQFFLVAGGMA 200
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ ++P K G +F +G + + Y+ TYS +Y A++ LV+
Sbjct: 201 ALYRYVPNTYVKWSHAWVGGLFVAAGLELGKRIVSLYLSAVPTYSLVYGAFATLPILLVW 260
Query: 255 LYMLGVFFILGAELNASM 272
+Y V ++GA + A +
Sbjct: 261 IYFSWVIVLMGAVIAAYL 278
>gi|89891451|ref|ZP_01202956.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
gi|89516225|gb|EAS18887.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
Length = 309
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 1/270 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D+ I + A AS IS S +++FPF++F NL F+ F ++ V
Sbjct: 34 LYDVAETYIIGIAQGAFSARASAISYSFFMAIFPFLLFVLNLIPFIPIENFQNEFLEFVI 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P ++ GL TI+ +++ F SNGV A+ R++ R
Sbjct: 94 ELLPAQAVSIFDQIFKEIALQGNTGLLTIAFVSSLIFMSNGVNAVFNGFERSFHTDFNRG 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYATM 186
++ IS +L ++ L+IM V + L +RK + R +
Sbjct: 154 FFRQYAISLAVSVLLTIFLLIMVIVTGYVEYLLEELRKSNIMSETGQGETLVFVRYLIVI 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +I + ++ F + G T + V+ +VL+ YI F++Y+ +Y +
Sbjct: 214 ILTYIFVAVLYYFGTRDGRQTRFFSIGASVTTVLIVLLSVLYGVYIDNFTSYNEIYGSIG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+++ ++++++ +LG ELNAS+
Sbjct: 274 ALLILMIYIWLNSNILLLGFELNASLRKLK 303
>gi|86146580|ref|ZP_01064902.1| ribonuclease BN [Vibrio sp. MED222]
gi|85835637|gb|EAQ53773.1| ribonuclease BN [Vibrio sp. MED222]
Length = 284
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 90/260 (34%), Gaps = 8/260 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIAKP 77
+ A +++ LLS+ P + ++ V VI V +
Sbjct: 1 MTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSVFADVGLVIQNFVITNFVPASGDA 60
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ +L+ +A + + ++ + + + +LN +RV E R ++ + +
Sbjct: 61 VHGALLEFVAN-TGKMTAVGSVFLFIAALMLISNIDKNLNYIWRVTEKRRAVLSFSMYWM 119
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L + + + + ++ F ++
Sbjct: 120 VLTLGPILIGASIAATSYVTSL------NLLQNEVVSSAFNTVIRKLPLITSFFAFFGLY 173
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L +P K G + + + + F YI F +Y +Y LA+I V++Y+
Sbjct: 174 LLVPNKKIHFSHAAAGSLVAALLFELSKKGFAAYITQFPSYQLIYGALAAIPILFVWVYL 233
Query: 258 LGVFFILGAELNASMIIYYW 277
+ ++GAE+ A++
Sbjct: 234 CWLIVLVGAEVTAALGEQEQ 253
>gi|84386321|ref|ZP_00989349.1| ribonuclease BN [Vibrio splendidus 12B01]
gi|84378745|gb|EAP95600.1| ribonuclease BN [Vibrio splendidus 12B01]
Length = 284
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 90/260 (34%), Gaps = 8/260 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIAKP 77
+ A +++ LLS+ P + ++ V VI V +
Sbjct: 1 MTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSVFADVGLVIQNFVITNFVPASGDA 60
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ +L+ +A + + ++ + + + +LN +RV E R ++ + +
Sbjct: 61 VHGALLEFVAN-TGKMTAVGSVFLFIAALMLISNIDKNLNYIWRVTEKRRAVLSFSMYWM 119
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L + + + + ++ F ++
Sbjct: 120 VLTLGPILIGASIAATSYVTSL------NLLQNEVVSSAFNTVIRKLPLITSFFAFFGLY 173
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L +P K G + + + + F YI F +Y +Y LA+I V++Y+
Sbjct: 174 LLVPNKKIHFSHAAAGSLVAALLFELSKKGFAAYITQFPSYQLIYGALAAIPILFVWVYL 233
Query: 258 LGVFFILGAELNASMIIYYW 277
+ ++GAE+ A++
Sbjct: 234 CWLIVLVGAEVTAALGEQEQ 253
>gi|293393648|ref|ZP_06637958.1| tRNA-processing ribonuclease BN [Serratia odorifera DSM 4582]
gi|291423983|gb|EFE97202.1| tRNA-processing ribonuclease BN [Serratia odorifera DSM 4582]
Length = 298
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 90/268 (33%), Gaps = 6/268 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
I+ + +A H++ +LLS+ P I L V +
Sbjct: 21 RLLIKRIDSDGLTMLAGHLAYVSLLSLVPLITVVFALFSVFPMFSDVSMQLKSFIFNNFM 80
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A + L+ + + + + + ++ LN +R R +
Sbjct: 81 PAAGNVIQRYLEQFVANSNKMTAVGTCGLIVTALLLMSSVDSVLNTIWRSKNKRPMVYSF 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + L + + + + + A + ++ ++ ++
Sbjct: 141 AVYWMVLTLGPLLVGASMAISSYLLSL------NWLAQTGVNSLVEQLLRIFPLILSWVS 194
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ +P + L G + + + +G F Y+ F +Y +Y LA I
Sbjct: 195 FWLLYSVVPTVRVPSKDALIGALVAGLLFELGKKGFALYVTMFPSYQLIYGVLAVIPILF 254
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y ++
Sbjct: 255 LWVYWSWCIVLLGAEITVTLGEYRAYRQ 282
>gi|319406347|emb|CBI79984.1| ribonuclease RNAse bn transmembrane protein [Bartonella sp. AR
15-3]
Length = 286
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 107/280 (38%), Positives = 174/280 (62%), Gaps = 1/280 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + I +A+ H++ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P
Sbjct: 2 IKRALWYSYHIFCNAVSHYLRDNGNAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ + P+ IA+P++ EI+ VL L T+S + AAYF+SNGV ALR +LN+AY
Sbjct: 62 QKIEALVQLLPDAIAEPLSKEIITVLTTQRGDLLTLSVIGAAYFASNGVSALRAALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV++ RS + R S +V++ ++ LV++SF+ V PL + ++ + + + +I
Sbjct: 122 RVIDRRSLFFCRFQSLFFVIIGTIGLVVISFLLVLAPLLIKIMQNYPCHITEYISMIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LF L+ VH +LPA + K++ ILPG++ T W + ++ F Y++ F Y++
Sbjct: 182 RYVIAIIVLFTSLLIVHKWLPAGQRKVIDILPGILVTIFVWFLTSIAFAQYLIMF-NYTS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
YAGL SIM ++FLY+L FILG E+NA++I Y K
Sbjct: 241 TYAGLTSIMIAIIFLYILSAIFILGGEINAAIIFYRDHSK 280
>gi|326386229|ref|ZP_08207853.1| ribonuclease BN [Novosphingobium nitrogenifigens DSM 19370]
gi|326209454|gb|EGD60247.1| ribonuclease BN [Novosphingobium nitrogenifigens DSM 19370]
Length = 374
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 2/274 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+I + + G A + + L+S+FPF + GA L LG + V
Sbjct: 71 RTIKVIRRVWAGVIND-GTIHAGNFAYMVLISLFPFCITGAALFSLLGKASEREAALSTV 129
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P V+A + VL L I + + VE +R L RAY R
Sbjct: 130 LAALPPVVAGVLGPVARGVLEARTGSLLWIGGAVGLWTVGSLVETIRDVLRRAYGTRMTR 189
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YAT 185
+++ RL S G +L + V +++ VAI A + P L + + R
Sbjct: 190 AFWERRLGSTGLILASVVLILLAITAQVAIAGAQEALFALAPELDGWIAGLALSRFLPTP 249
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + +IFV L + + PGV+F W + + TY Y L
Sbjct: 250 LLFAALWIIFVTLTPEPYRGRRYPKWPGVLFVTCWWQAITIALPKLLRYLFTYDLTYGSL 309
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A +M L F +++G+ ++GAELNA++ +
Sbjct: 310 AGVMIALFFFWLVGLGMVVGAELNAALAETPEER 343
>gi|326799520|ref|YP_004317339.1| ribonuclease BN [Sphingobacterium sp. 21]
gi|326550284|gb|ADZ78669.1| ribonuclease BN [Sphingobacterium sp. 21]
Length = 387
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 46/285 (16%), Positives = 102/285 (35%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
++ F I+ +I F+E + M+ ++ + S+ P +V L GF G
Sbjct: 70 KKLMPKAFQILKASINGFMEHNVTKMSGSLAYYTVFSMAPLLVLVIALCGFFLGREAAEN 129
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + + A I + I + I A+ ++ ++ S+N
Sbjct: 130 QIYGQLSTFLDKNTALQIQEVIKNANINGSSTTAIVIGAVTLLIGATTVFADIQDSINHI 189
Query: 120 YRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + R +SF ++ S L++ + + + + + +
Sbjct: 190 WGIKPKPKKGWLKMLQNRFLSFSVIISLSFILLVSLLITTFLDSFSDRLSVRYENVSIVF 249
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I N T+ ++ + LP A+ + +L G T I +++G + YI
Sbjct: 250 FYILN--QVITLAVIWFIFAVIFKVLPDARIRWKDVLTGAFVTAILFILGKFAISFYIGR 307
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ L++ Y + GAE + +I Y +
Sbjct: 308 SGAGDA-FGSARSLVILLLWTYYSAMILYFGAEFTKAYVIAYGSE 351
>gi|308047823|ref|YP_003911389.1| tRNA-processing RNAse BN [Ferrimonas balearica DSM 9799]
gi|307630013|gb|ADN74315.1| tRNA-processing RNAse BN [Ferrimonas balearica DSM 9799]
Length = 289
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 93/276 (33%), Gaps = 6/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + V E A H++ +LLS+ P + ++ V
Sbjct: 12 MQLSWREVLGFFPYLWRRVGENGLQVTAGHLAYVSLLSLVPMLAVVLSVFSAFPGFAGVR 71
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ A L A + + L A + + + +LNR +
Sbjct: 72 ADLEAFVYNNFVPTAGETVQLYLSQFVDNASRMTAVGVLFLAVVALMLISNIDKALNRIW 131
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV R + + + + L + + V + + L+
Sbjct: 132 RVKTRRRAIYSFSMYWMILTLGPMLMGASIAVTSYLVSMKLFSDTGLSGAYAFLIAR--- 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L ++L +P + + + G + + G F Y+ F +Y
Sbjct: 189 ---LPFLLSVSAFALLYLLVPNTRVRFHHAVIGAFVAALLFEAGKRGFAWYVTQFPSYEA 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y LA+I +++Y+ + +LGAE+ A++ ++
Sbjct: 246 IYGALATIPILFLWVYLSWLIVLLGAEITAALPEHF 281
>gi|269140831|ref|YP_003297532.1| ribonuclease BN [Edwardsiella tarda EIB202]
gi|267986492|gb|ACY86321.1| ribonuclease BN [Edwardsiella tarda EIB202]
gi|304560591|gb|ADM43255.1| Ribonuclease BN [Edwardsiella tarda FL6-60]
Length = 292
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 100/281 (35%), Gaps = 9/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + ++ +A ++ +LLS+ P I +L V
Sbjct: 6 LKRIKGWAY-FAKVLWQRVDDDRMTMVAGSLAYVSLLSLVPLITVVFSLFTAFPMFASVS 64
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + Q +A +K + + + + + ++ +LN
Sbjct: 65 FQLKHFIFTNFVPAAGDVVQSYLEQFVANSSK-MTALGTIGLIVTALLLISSVDGALNHI 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R R+ + + + + L + + + + + A + ++
Sbjct: 124 WRSERKRAVVYSFAVYWMILTLGPLLVGASMAISTYLLSL------RWLADSAVYSMVDQ 177
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L + ++ +P + + L G + + +G F YI F +Y
Sbjct: 178 LLRLFPLLLSCVSFWLLYCIVPTQRVPMRDALIGAVVAGGLFELGKKAFALYITAFPSYQ 237
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I V++Y +LGAE+ ++ + ++
Sbjct: 238 LIYGVLAVIPMLFVWVYWSWCIVLLGAEVTVAIGDFRAHRR 278
>gi|261493054|ref|ZP_05989594.1| ribonuclease BN [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496342|ref|ZP_05992737.1| ribonuclease BN [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261307986|gb|EEY09294.1| ribonuclease BN [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311274|gb|EEY12437.1| ribonuclease BN [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 281
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 101/275 (36%), Gaps = 6/275 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ I + + E + A +++ S +L++ PFIV ++ F +
Sbjct: 2 LNRLWRFIKLFAKRYNENNIAISAGYLTYSTMLAIVPFIVVLFSIFTFFPIFHEANEQLK 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
A + E +++ AK + +S + + ++++ +LN +
Sbjct: 62 AFIYDNFAPSASEMVSEYIELFVSNAKQMGLVSFIGLFVVTIMLIKSIDEALNTIWHDNR 121
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + L+ F +L + + + + L + +
Sbjct: 122 QRPMWFSFLLYFLILLFGPLLAGASIAISTYVMSLSIFNGS------GALSLGQHLLELT 175
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L +++ V+ F+P K K + G + I + +G F YI F +Y +Y
Sbjct: 176 PFLLIWLLFTLVYKFIPIRKVKFIHAAIGALMAAIFFTLGKKAFIWYITAFPSYQAIYGA 235
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
LA + L+++ + +LG + A + K
Sbjct: 236 LAVLPIMLLWIQLSWQVVLLGGQFAAVLDEMETDK 270
>gi|90426354|ref|YP_534724.1| ribonuclease BN [Rhodopseudomonas palustris BisB18]
gi|90108368|gb|ABD90405.1| ribonuclease BN [Rhodopseudomonas palustris BisB18]
Length = 297
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 109/279 (39%), Positives = 163/279 (58%), Gaps = 2/279 (0%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + DA F+ +DGWA+ASHI+LS+L+++FPF++ +LAGF G+
Sbjct: 2 RQLRYAYLVGIDAFYTFLADDGWAIASHIALSSLMALFPFLIVLTSLAGFFGSKGLADQA 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+++ WP +A ++ EI VL TI L A YF+SNG+E+LR++LNRAY V
Sbjct: 62 AELMLQVWPIQVADALSGEIHDVLTTTRGDALTIGLLLAIYFASNGIESLRVALNRAYAV 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGR 181
E RSWY RL S GY L+A+ T + M+F+ V PL LA R++ P + + ++ R
Sbjct: 122 TETRSWYWLRLESIGYTLVAAFTALAMAFLIVLGPLLLAAARRYVPLVIEDNATLLNVTR 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYST 240
T+ L I L +H +LP + ILPG+IFT ++ ++ + F Y+ F S Y T
Sbjct: 182 YGITITVLIIALFLLHAWLPCGRRTFWQILPGIIFTMVASLLSGIGFGMYLARFASNYVT 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
MYAGLAS++ LVFLY + F+ G ELNA++I +
Sbjct: 242 MYAGLASVIIALVFLYFIAAIFVYGGELNAAIIKSRLPR 280
>gi|34496265|ref|NP_900480.1| ribonuclease BN/unknown domain fusion protein [Chromobacterium
violaceum ATCC 12472]
gi|81656737|sp|Q7NZV9|Y810_CHRVO RecName: Full=UPF0761 membrane protein CV_0810
gi|34102119|gb|AAQ58486.1| ribonuclease BN [Chromobacterium violaceum ATCC 12472]
Length = 417
Score = 127 bits (318), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 88/271 (32%), Gaps = 8/271 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTV 62
F ++ ++ + LL++ P ++ +
Sbjct: 20 RLEPYFGFARFIARRMSCLRVLQISGSLTFTTLLALVPLFTIALSVISAFPVFSDYSTRF 79
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ A + ++ A A+ L + + + + + N + V
Sbjct: 80 KIMLLSTLVPEFAGKVITVYMRQFADNAEKLTAAGIVMLGVTALMLMSTIERTFNAIWGV 139
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R W ++ + + L + L ++ K NL L+
Sbjct: 140 RRGRPWLQQSMVYWTVLTLGPLVLGGSLLS-------WRWLFKATRLEKNLPLLASVLEA 192
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T++ + L ++ +P + G + T + + + F YI ++Y +Y
Sbjct: 193 GGTIVLTALVLALLYRIVPNRFVPFRHAVWGALVTSVLLELTKMGFGFYIGQVASYQLVY 252
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
ASI L+++Y L + + GA +++
Sbjct: 253 GAFASIPIFLLWVYCLWLVVLAGAVFTSALS 283
>gi|259503840|ref|ZP_05746742.1| ribonuclease BN [Lactobacillus antri DSM 16041]
gi|259168219|gb|EEW52714.1| ribonuclease BN [Lactobacillus antri DSM 16041]
Length = 332
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 63/277 (22%), Positives = 126/277 (45%), Gaps = 2/277 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + + HF + A+ ++ LLS+FP ++ NL +G
Sbjct: 37 MKNEPGKFKNFVLLLMRHFTMAQISSSAAMLAYYTLLSIFPAVLVIGNLLPMVGLDA--N 94
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
TV+ + A P + I I L + GL T AL A + +S G+ A + S+N Y
Sbjct: 95 TVLSYLQTAVPSSVYVFIKPLIYDFLRRGSGGLLTTGALIALWSTSQGIAAFQRSVNLTY 154
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V ++ I R++SF ++++ + + ++ ++ L ++ F + + +
Sbjct: 155 DVARNQNPVINRVVSFIWMIVVIILIFVIVLLYGFGEQVLNSIQPFLQFNRRYISLFNSL 214
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LFI L ++ F+P AK ++ G + + W+ + LF++Y V F
Sbjct: 215 RWPVALAVLFIALTLLYYFVPNAKVRLRYAATGALLAALLWMGLSRLFSYYTVFFRHSVV 274
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L + G +LGA LNA++ +
Sbjct: 275 SYKTIGAFIAMMIWLDLSGYVIMLGAVLNATLQEAHE 311
>gi|260429445|ref|ZP_05783422.1| ribonuclease BN [Citreicella sp. SE45]
gi|260420068|gb|EEX13321.1| ribonuclease BN [Citreicella sp. SE45]
Length = 306
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 116/284 (40%), Gaps = 8/284 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F ++ + E + +A+ ++ A LS+FP I + G+ +
Sbjct: 24 IKLTFGDWMSALWGTWQRMDERNLGLIAAGVAFYAFLSLFPAISAVIAIWGYWADPIVIS 83
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL---FTISALAAAYFSSNGVEALRISLN 117
+++V PE + +I ++ L IS + A + S V AL LN
Sbjct: 84 EQMELVKEVMPEEAYSLLATQISALITANRSTLQWASVISIVLAIWSSRASVAALIRGLN 143
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + ++F +L +T ++ V +P ++ ++ L++
Sbjct: 144 AVYNTPHRENAIRRLAVAFLLTVLLVLTALVAFAAVVIVPATFVFL----GLPFHVELMV 199
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + +F + ++ + P + ++ PG + + W +G+ + T Y+ F
Sbjct: 200 SMLKWAILLAVVFFAIALLYRYGPNRRQARMRWFTPGAVLALLGWALGSWVLTTYVRNFD 259
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +Y L +++ L++ Y+ + +LGA+LN + ++
Sbjct: 260 RLNEVYGSLGAVVALLLWFYVSALVTLLGAQLNGELNKRRKIRE 303
>gi|148976521|ref|ZP_01813217.1| ribonuclease BN [Vibrionales bacterium SWAT-3]
gi|145964097|gb|EDK29354.1| ribonuclease BN [Vibrionales bacterium SWAT-3]
Length = 285
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 90/257 (35%), Gaps = 8/257 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIAKP 77
+ A +++ LLS+ P + ++ V VI + +
Sbjct: 1 MTHDRVNVNAGYLAYITLLSIVPMLTVLLSILSSFSVFADVGIVIQNFIITNFVPASGDA 60
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ +L+ +A + + ++ + + + +LN +RV E R ++ + +
Sbjct: 61 VHGALLEFVAN-TGKMTAVGSVFLFIAALMLISNIDKNLNYIWRVTEKRRAVLSFSMYWM 119
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L + + + + ++ F ++
Sbjct: 120 VLTLGPILVGASIAATSYVTSLS------LLQNEVVSGAFNTLIRKLPLILSFFAFFGLY 173
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L +P K G + + + + F YI F +Y +Y LA+I V++Y+
Sbjct: 174 LLVPNKKIHFSHAAAGSLVAALLFELSKKGFAAYITQFPSYQVIYGALAAIPILFVWVYL 233
Query: 258 LGVFFILGAELNASMII 274
+ ++GAE+ A++
Sbjct: 234 CWLIVLVGAEVTAALGE 250
>gi|283851887|ref|ZP_06369164.1| ribonuclease BN [Desulfovibrio sp. FW1012B]
gi|283572803|gb|EFC20786.1| ribonuclease BN [Desulfovibrio sp. FW1012B]
Length = 451
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 46/261 (17%), Positives = 102/261 (39%), Gaps = 4/261 (1%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
F++ G AS +S + +LS+ PF+ +LA LG + + +
Sbjct: 46 RSFLDTRGILQASALSYTTVLSIVPFLAVAFSLAKGLGLYN--SPQVRGLLLRLFAGRED 103
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+L + + L + + + + + + + +++N A+ + + + F
Sbjct: 104 VADQILLYIQNTNLQTLGAVGTILLLFTAVSLLFNIEVAVNAAWGMAPKATVWSRFTNYF 163
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+++L L V + V A+ + + A ++ ++ +
Sbjct: 164 VFIVLCPPLLFAALSVTATLQALD--VTHRLLAISFISGLEKALLTIAPVVVIWGVFYLL 221
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ FLP + K S L G + W V + + ++Y+ +Y A I LV+LY
Sbjct: 222 YQFLPNTRVKPASALLGAVTAGTVWQVVQWAYLKFQFGSASYNAIYGSFAQIPLLLVWLY 281
Query: 257 MLGVFFILGAELNASMIIYYW 277
+ V +LGA+++ + Y
Sbjct: 282 VSWVIVLLGAQISHTSQCYRQ 302
>gi|86360754|ref|YP_472641.1| putative ribonuclease protein [Rhizobium etli CFN 42]
gi|86284856|gb|ABC93914.1| putative ribonuclease protein [Rhizobium etli CFN 42]
Length = 359
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 117/274 (42%), Gaps = 6/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + +++ +A+ ++ LL++FP + +L G + + + +
Sbjct: 63 LRDVFWRVFHEVLDDRVTLIAAGVTFYLLLALFPALAALVSLYGLVADPITISEHLRELA 122
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVE 124
P + D++ ++ L A + + +G A+ ++N AY E
Sbjct: 123 ILLPPGAFDLLADQLKALVEKRDSTLGITFFVGLGIALWSTHSGTLAIFDAMNVAYEERE 182
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS LI + L A V V++ + +P+ L+Y+ LL+ W +
Sbjct: 183 KRSLVRLNLIGLCFTLCAVVFAVVVVALMGVMPVVLSYLWLDQFKEHMALLLRWPLLLLV 242
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++A+ F PA ++ + G + T ++ ++ F+ Y+ F+ Y Y
Sbjct: 243 VVVAVTFVYRFGPSREPA---RVRWMTWGAVLTALACAAMSLGFSFYLEHFANYDATYGT 299
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L +++ L+++++ V I+GAELNA + R
Sbjct: 300 LGALIGFLIWIWLSVVILIVGAELNAELEHQTAR 333
>gi|170692953|ref|ZP_02884114.1| ribonuclease BN [Burkholderia graminis C4D1M]
gi|170141951|gb|EDT10118.1| ribonuclease BN [Burkholderia graminis C4D1M]
Length = 432
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 105/269 (39%), Gaps = 5/269 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A++ F E+ A+A+ I+ A S+ P +V +AG F GA + D + G +
Sbjct: 25 ALKQFSEDRCTALAASIAFYAAFSLAPTLVMVIAVAGWFFGAEAARGELFDHIHGLLGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + + + G IS A +S +L +LN + R+ +
Sbjct: 85 AAAGVQTIVENAHHSGSAGGVAAIISFTMLAIGASATFSSLNSALNVVWPYTGPRTSSVL 144
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + + YV K+ ++I ++ +L L
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVLDTVITYVGKWLWGDSPYVVIGNLLQLGVGLLVLA 204
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A + L G + + + G LF Y+ S+ + S+
Sbjct: 205 FAFAGLLKFLPDASVRWRDALVGGVVAAVLFSAGKKLFALYLAHAGMASS-FGAAGSLAV 263
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY +LGAE +A+ +
Sbjct: 264 LLMWLYFSAAVLLLGAEFSAARGRLNDPR 292
>gi|319409429|emb|CBI83078.1| ribonuclease RNAse bn transmembrane protein [Bartonella
schoenbuchensis R1]
Length = 284
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 115/278 (41%), Positives = 172/278 (61%), Gaps = 1/278 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ C I+ +A+ H+V ++G A ASHI LS LL+ FPF +FGA+LA F + P
Sbjct: 2 IKNVLCYGCRILINAVSHYVRDNGSAFASHIVLSGLLAFFPFCIFGASLASFFWDFAYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I+ + P+ IA+P + EI+ VL +GL T+S + AAYF+SNGVEALR +LN+AY
Sbjct: 62 QKIEALMHLLPDAIAEPFSKEIVNVLVTQRRGLLTLSFVGAAYFASNGVEALRAALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS + R S +V++ ++ + ++SF+ V PL + + FP + + +I
Sbjct: 122 RVVDQRSLFFCRFQSLFFVIIGTIGISVISFLLVLAPLLIKITQNHFPFIVEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LFI L+ VH +LPA + K+ ILPG+I T W ++ F HY+ F Y +
Sbjct: 182 RYTIAVVVLFISLLIVHKWLPAKRRKLRDILPGIIVTLFLWFSASITFAHYLTMF-NYVS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGLASIM ++FLYML FILG E+NA+++ Y R
Sbjct: 241 TYAGLASIMIAIIFLYMLSAIFILGGEINAAIMFYRTR 278
>gi|28212101|ref|NP_783045.1| ribonuclease BN [Clostridium tetani E88]
gi|28204544|gb|AAO36982.1| ribonuclease BN [Clostridium tetani E88]
Length = 282
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 68/267 (25%), Positives = 126/267 (47%), Gaps = 2/267 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ I +E++ A+AS +S S LLS FPF++F L GF V+ + P+
Sbjct: 13 KNIINKIIEDEVPALASQLSYSLLLSFFPFLIFLMTLLGFSSIDN--EYVLLELKTMLPD 70
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + ++++L L + S + + SS G A+ +N+AY E RS
Sbjct: 71 SAYELVYNTVIEILGTRDSNLLSFSIIFTVWTSSTGFRAVIKGINKAYDEKEKRSLPKVF 130
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LIS L +++ V L Y+ + L R + +L +
Sbjct: 131 LISILSTLSLGFLIILTVLFLVFGQLIGLYLVQKLKMGSLFYLTWNIIRYIIILSSLVVI 190
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ F+P+ K + ++PG IF + W+ + +F++Y+ F+ YS +Y + +++ +
Sbjct: 191 FALMYKFIPSRKLRWREVMPGAIFATVGWLFSSFIFSYYVNNFANYSRIYGSIGAVIILM 250
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
V+LY+ + ILG ELNA + I+ K
Sbjct: 251 VWLYLTSIIIILGGELNAFISIHESIK 277
>gi|298293398|ref|YP_003695337.1| ribonuclease BN [Starkeya novella DSM 506]
gi|296929909|gb|ADH90718.1| ribonuclease BN [Starkeya novella DSM 506]
Length = 277
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 111/272 (40%), Positives = 156/272 (57%), Gaps = 1/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
FDI +DA FVE+DGWA++SHI+LSAL+S+FPF++F LA F + ++
Sbjct: 5 FDIAWDAFWRFVEDDGWAISSHIALSALMSLFPFLIFVTALAAFFDLKTLADETVQLMLE 64
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
AWP +A PI EI VL + TI + A YFSSNG+E+LRI LNRAY V E R+W
Sbjct: 65 AWPAQVAAPIGREIRNVLTQVRTDVLTIGVVLAIYFSSNGIESLRIGLNRAYGVRESRAW 124
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
Y RL S GYV++ + L+ +SF+ V P+ ++ PAL +I R AT
Sbjct: 125 YWLRLESIGYVVVGAAGLLALSFLVVLGPVLWLAAVRWVPALQPFGWVITFLRYAATSAI 184
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLAS 247
L + L+ H++LPA + + + PG++ T W+ F Y+ F+ Y T YAGLAS
Sbjct: 185 LIVALVVAHVWLPAGRRTLAEVAPGILVTLGLWLAAGAAFGRYLAEFANNYVTTYAGLAS 244
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+M LVFLY F+ G ELNA++ +
Sbjct: 245 VMIALVFLYTTASIFVYGGELNAAIRRAREGR 276
>gi|86606321|ref|YP_475084.1| YihY family protein [Synechococcus sp. JA-3-3Ab]
gi|86554863|gb|ABC99821.1| YihY family protein [Synechococcus sp. JA-3-3Ab]
Length = 324
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 118/287 (41%), Gaps = 18/287 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
+ + A E+ + + +AS ++ S++L++FPFI+ G + Q +++ +
Sbjct: 19 WRTLRLAWENAMRYRLFGLASEMAYSSMLALFPFILTLLTGIGLFVGSSEQAFQRLMEQL 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-- 124
P+ + ++ +GL ++S L + +S + A+ +L+ ++ + +
Sbjct: 79 GQIAPQEALVLLERYARELRFGENRGLLSLSFLGTLWAASGALGAVMTALDLSHEIPQEM 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--------------PAL 170
R ++ +LIS ++L + S +F+ ++ P
Sbjct: 139 RRPFWRRKLISMVWMLATLGLTGLASLIFLFSASFFRFLSAQAKSLAEGVAGPDQLDPWR 198
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
L + ++ + + ++ F P+ + M I PG I + WV +
Sbjct: 199 ELALKLWEALTWPISLGMIVVSCWVLYRFGPSLRRPQMPIWPGAIVASLLWVGVSWGLRV 258
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y+ F + +Y + +++ L+++++ + + G ++N ++
Sbjct: 259 YVEHFGQLNQVYGAVGAVIVLLLWVWLTSLALLFGDQINIALYQARQ 305
>gi|260557072|ref|ZP_05829289.1| tRNA-processing ribonuclease BN(RNase) [Acinetobacter baumannii
ATCC 19606]
gi|260409678|gb|EEX02979.1| tRNA-processing ribonuclease BN(RNase) [Acinetobacter baumannii
ATCC 19606]
Length = 396
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 100/280 (35%), Gaps = 4/280 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F I I+ F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFILFVIKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + D+ L + L I L + + ++ NR +
Sbjct: 69 QQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E RS + + + + L + L + + F + ++
Sbjct: 129 RVKETRSGIVGFMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFLL--- 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +G ++ +P + + + + LF+ + F++Y
Sbjct: 186 -WLISFVLTILGFFILYWTIPNRTVPLYAAAIAACLSAALFETLKNLFSFVMSNFTSYEI 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 245 IYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKE 284
>gi|308176403|ref|YP_003915809.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
gi|307743866|emb|CBT74838.1| ribonuclease BN-like protein [Arthrobacter arilaitensis Re117]
Length = 392
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 56/292 (19%), Positives = 114/292 (39%), Gaps = 14/292 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ F + A+ F DG +A+ +S +L++FP ++ +L GA +
Sbjct: 9 KDRFKESLNCYPRALREFFRNDGLDVAASLSYFMVLAMFPGLLALISLLALAGASESGTK 68
Query: 62 VIDVVFGAWPEVIAKP----------ITDEILQVLAVPAKGLFTI---SALAAAYFSSNG 108
I + + +++L+ LA A G F +L A + +S
Sbjct: 69 WIMELLEQSLGASGQSSGGDSQQLLDTAEQLLEGLASQAGGTFWTILAGSLGALWSTSGY 128
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
V A +LNR Y E R + R F +L + V+ + +A + F
Sbjct: 129 VTAFSRALNRLYGAPEGRPQWKRRPQMFLITVLIMLVAVVTLVLVLASGSVARGIGNIFG 188
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVL 227
+L++ + ++ L + L ++ F P K K PG + + +
Sbjct: 189 LGDGFVLMLNIAKPPILLIMLLLVLALLYYFTPNVKPRKFRWFSPGTLTALVILGLSVFG 248
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
F Y+ F++YS Y + ++ ++ ++ + +LGA ++ I +
Sbjct: 249 FGIYVSQFASYSATYGTIGGVIILVLACWISNIALLLGASVDIEFIRLRQLR 300
>gi|218437304|ref|YP_002375633.1| ribonuclease BN [Cyanothece sp. PCC 7424]
gi|218170032|gb|ACK68765.1| ribonuclease BN [Cyanothece sp. PCC 7424]
Length = 291
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 47/283 (16%), Positives = 102/283 (36%), Gaps = 11/283 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
++ ++ + + + +++ +A+ ++ ++S+ P ++ +AG G +
Sbjct: 2 RIKVIIRLLKETFKEWQDDNASRLAASLAYYTIISLAPLLILVIAIAGAVFGEEAARGQI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + G A+ I I IS + +S L+ +LN +
Sbjct: 62 VYQIQGLVGIDGARVIETAIENSNKPEIRNFASLISIGVLLFGASGVFAELQDALNTIWE 121
Query: 122 VVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V ++ R++SF +L L++ + + +Y P L I
Sbjct: 122 VKVKPGQGVGTFIRKRILSFSAILGIGFLLLVSLVISAILSAFNSYFSHLIPGLE---FI 178
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + F+ FLP AK + G I T + + +G Y+
Sbjct: 179 WQIVNFVVSFGVITLLFGFMFKFLPDAKIAWRDVWMGAIITALLFSIGKYALGAYLGG-G 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + Y S++ LV++Y GAE Y K
Sbjct: 238 SFGSTYGAAGSLVVILVWVYYSAQILFFGAEFTQVYAKRYGSK 280
>gi|296537248|ref|ZP_06899146.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
gi|296262424|gb|EFH09151.1| ribonuclease BN [Roseomonas cervicalis ATCC 49957]
Length = 311
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 102/274 (37%), Gaps = 3/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
+ +I + F+E+D + + I+ + S+ P ++ +AG G +++ +
Sbjct: 5 WWLIRQTVLGFIEDDALSRGAAIAFYTVTSLAPVLIIAIAIAGSVFGEDAARGAIVEQLG 64
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G A+ + I+ + L +S ++ SLN+ +R
Sbjct: 65 GLMGAAGAELVQSIIVSASNPTSGLLASVFGIATLLLTASGVFGEIQASLNQIWRAEPRT 124
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S + L + ++ V A + L + L + + +
Sbjct: 125 SVSRLLQARAASLGLVATLGFLLLVSLVVSAALTALGQALDGHLPAVALAVRLANVVISF 184
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ LP K + ++ G I T + + +G L Y+ + S T Y
Sbjct: 185 ALVALLFAAIYKILPDRKLEWRDVMVGAIATTLLFNLGKTLIGLYLGS-SAIGTTYGAAG 243
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S + L+++Y F+LGAE + ++ ++
Sbjct: 244 SAVIVLLWIYYSAQIFLLGAEFTKAWAMHRDARR 277
>gi|301308861|ref|ZP_07214813.1| YihY family protein [Bacteroides sp. 20_3]
gi|300833385|gb|EFK64003.1| YihY family protein [Bacteroides sp. 20_3]
Length = 456
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 101/271 (37%), Gaps = 3/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E + + + A+ F E+ AS ++ S LLS+ P + +A G V
Sbjct: 43 LKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFGFQGTVR 102
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ F + K + + + + Y N + ++ + N +
Sbjct: 103 QELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFNDIW 162
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ + R WY L+ V + S + + + + L+ + +
Sbjct: 163 QIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLFFTPLMELFLHI 222
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + +++ LP K + ++ L ++ + ++ + S Y+
Sbjct: 223 ---APYIITTLAFTGLYVSLPNTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSKYNA 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A++ L++L + + + GAEL+ +
Sbjct: 280 IYGSFAALPLLLLWLQLSWLICLFGAELSYA 310
>gi|168334236|ref|ZP_02692437.1| hypothetical protein Epulo_04779 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 292
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 65/258 (25%), Positives = 122/258 (47%), Gaps = 4/258 (1%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ F+ D ++ ++ +L++FPF++ NL ++ ++ V P ++A
Sbjct: 13 KRFLNHDVSPRSAQMTYYWILAIFPFLLMIINLISYVKIDSI--NFMEYVPKVVPSMVAP 70
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ + ++ + + A+ A + +S V L + AY VV+ R++ + +L
Sbjct: 71 LVESTVNSMIEKRSGTGIFVGAVLALWSTSAAVNTLIKGIYLAYGVVDSRNFVVRKLAGM 130
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATMLALFIGLI 194
Y LL + L+ M + + Y+ K F + L+ R+ + + L
Sbjct: 131 MYSLLLAFILIAMVVLLIFGNKLGQYILKLFLVRYPKSYTLMWDLTRLCLSWILLISSSY 190
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F+H +P K + PGV FT ISW V + LF+ Y+ FS Y +MY + I L++
Sbjct: 191 FIHRVIPRRHIKNRYLWPGVFFTAISWYVFSYLFSIYVEHFSNYGSMYGSIGGIFVLLIW 250
Query: 255 LYMLGVFFILGAELNASM 272
LY G+F ++GAE+NA +
Sbjct: 251 LYTNGLFILIGAEINAII 268
>gi|150007019|ref|YP_001301762.1| ribonuclease BN [Parabacteroides distasonis ATCC 8503]
gi|255015944|ref|ZP_05288070.1| ribonuclease BN [Bacteroides sp. 2_1_7]
gi|256841906|ref|ZP_05547411.1| ribonuclease BN [Parabacteroides sp. D13]
gi|298377445|ref|ZP_06987398.1| YihY family protein [Bacteroides sp. 3_1_19]
gi|149935443|gb|ABR42140.1| ribonuclease BN [Parabacteroides distasonis ATCC 8503]
gi|256736222|gb|EEU49551.1| ribonuclease BN [Parabacteroides sp. D13]
gi|298265859|gb|EFI07519.1| YihY family protein [Bacteroides sp. 3_1_19]
Length = 456
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 99/271 (36%), Gaps = 3/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E + + + A+ F E+ AS ++ S LLS+ P + +A G V
Sbjct: 43 LKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFGFQGTVR 102
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ F + K + + + + Y N + ++ + N +
Sbjct: 103 QELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFNDIW 162
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ + R WY L+ V + S + + + + ++
Sbjct: 163 QIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLF---FTPLVELF 219
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + +++ LP K + ++ L ++ + ++ + S Y+
Sbjct: 220 LHIAPYIITTLAFTGLYVSLPNTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSKYNA 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A++ L++L + + + GAEL+ +
Sbjct: 280 IYGSFAALPLLLLWLQLSWLICLFGAELSYA 310
>gi|285017291|ref|YP_003375002.1| tRNA-processing ribonuclease bn (rnase bn) protein [Xanthomonas
albilineans GPE PC73]
gi|283472509|emb|CBA15014.1| putative trna-processing ribonuclease bn (rnase bn) protein
[Xanthomonas albilineans]
Length = 424
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 104/272 (38%), Gaps = 8/272 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + F+++ + A+ ++ + + ++ P V + + + D
Sbjct: 19 RMRSFAAFLWQRFLDDRLFQAAASLAYTTIFALVPLAVVVFGVLSAFPVFNEWSDQLSDY 78
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+F + A+ + + Q + A L T +A + ++ + N+ +RVV
Sbjct: 79 IFSHFVPAAARSVEAYLRQF-SASAGQLTTAGVIALMVSLLITLHSIEQTFNQIWRVVSA 137
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R L+ + +V + ++ ++ + + A
Sbjct: 138 RPQLSRFLVYW------TVLTLGALLAAASLAVSARFFALPLFKTSQGQWLAQLVLSMAP 191
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + + V+ +P ++ LPG + + + + Y+ F +Y +Y +
Sbjct: 192 VLIECVCITLVYRVVPHHTVRLRHALPGALLAVVLLELVKCGLSLYLGGFQSYQRIYGTV 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A + L+++YM + +LGA +++S+ + +
Sbjct: 252 AFVPIFLLWIYMSWIAILLGASVSSSISAFRY 283
>gi|307822337|ref|ZP_07652569.1| ribonuclease BN [Methylobacter tundripaludum SV96]
gi|307736903|gb|EFO07748.1| ribonuclease BN [Methylobacter tundripaludum SV96]
Length = 437
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 102/274 (37%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ I +++ F ++ AS ++L +LLS+ P I +A G + +
Sbjct: 25 KAIIIKSLKIAILSVQGFSQDLCPLRASALTLYSLLSIVPVIAMLFGIAKGFGFEKMLEQ 84
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + I+ + + + + I + + + + + S N ++
Sbjct: 85 RLIEQAPERDTLVLQLISFAQNLLDSTKSGVIAGIGIVILFWTIISVIGNIEESFNHIWK 144
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R+ +LLA V L+ + V + + + ++ ++
Sbjct: 145 IGKGRAISRKFSDYLSLMLLAPVILIASGSIAVLLNIKITWLITIIELPEFGTWLVIKAL 204
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + F +F+P K + + + T I + + + + S Y+ +
Sbjct: 205 GLLPLALMIGLFAFTFIFMPNHKINCRAGIIAGVATGIMYHLVQWAYLSLQIGVSNYNAI 264
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y A++ +V+L + +LG E+ + Y
Sbjct: 265 YGSFAALPLFVVWLQTGWMIVLLGCEVAFFLQNY 298
>gi|223041514|ref|ZP_03611716.1| tRNA-processing ribonuclease BN [Actinobacillus minor 202]
gi|223017666|gb|EEF16075.1| tRNA-processing ribonuclease BN [Actinobacillus minor 202]
Length = 284
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 101/274 (36%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVV 66
+ I+ + A +++ + +L++ P I+ ++ + + +
Sbjct: 5 LLLFFRMFIKRAGQNQLPVTAGYLTYNTMLAMVPLIMVVFSVFTIFPFFTEATEQLKSFI 64
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + I + + + +K + +S + + + + +LN + R
Sbjct: 65 YDNFAPNIGDVVQQNLDSFVNN-SKQMGIVSTIGLVVVALMLIHNVDKALNGLWHEPRKR 123
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S +I+ L+ ++LA + + + I + + Y
Sbjct: 124 SIFISFLLYAVILVLAPLVAGVSIAITSYIMSLSLFNE------VATFSLATTLLNYTPF 177
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +++ ++ F+P K G +F I + +G F YI TF +Y +Y LA
Sbjct: 178 LLIWLLFTLIYKFVPNTTVKFKHACAGALFAGIFFTLGKQAFIWYITTFPSYQAIYGALA 237
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ L+++++ +LG + A + K+
Sbjct: 238 VLPIMLLWIHLSWQVVLLGGQFAAVLKELEMIKQ 271
>gi|269119358|ref|YP_003307535.1| ribonuclease BN [Sebaldella termitidis ATCC 33386]
gi|268613236|gb|ACZ07604.1| ribonuclease BN [Sebaldella termitidis ATCC 33386]
Length = 424
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 100/268 (37%), Gaps = 4/268 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+E+F ++ ++ + + ++ ++L+V P I + G F
Sbjct: 16 KEHFEKQILLVITVYRNYNDSQTQLWTASLTYYSILAVIPVIALTLGITKGFGIDMFFEE 75
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I F E A I + + L + + + + L + NR ++
Sbjct: 76 KIYSTFPESKEGAAMIINVAKKLIDSTKGSVLTGVGVVILLWTILKLLLMLENAFNRVWK 135
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS + V L + ++ + L + + F + L +
Sbjct: 136 VKRDRSIVRRMIDYVAIVFLGPIFFAVVLATISLLTRYLRGLARGFLFSMGVPLFLN--- 192
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+A L + + +++ +P K K L I T I + + +F H + S Y+ +
Sbjct: 193 -FAGFLIIILLFTCIYIIVPNTKVKFKPALVAGIATTIMFYILKFIFFHVQSSISKYNAI 251
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELN 269
Y L+ I L+++ + + ++GA+++
Sbjct: 252 YGSLSFIPIFLIWVQYIWMSVLVGAQIS 279
>gi|291619498|ref|YP_003522240.1| Rbn [Pantoea ananatis LMG 20103]
gi|291154528|gb|ADD79112.1| Rbn [Pantoea ananatis LMG 20103]
gi|327395807|dbj|BAK13229.1| tRNA-processing ribonuclease Rbn [Pantoea ananatis AJ13355]
Length = 289
Score = 126 bits (316), Expect = 4e-27, Method: Composition-based stats.
Identities = 36/280 (12%), Positives = 100/280 (35%), Gaps = 8/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R + + + + A +++ +LL++ P I L +
Sbjct: 7 RPGLHAFWLWLKLLWKRIDNDAMTTQAGNLAFVSLLALVPLIAVVFALFAAFPVFSDISV 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +F + + + Q +A + + + A+ + + ++ +LN +
Sbjct: 67 QLKNFIFTNFMPAAGNTLQRYLEQFVANVHR-MTAVGAVGLIVTALLLMHSVDSALNAIW 125
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + R + + + + L + + + + + + ++
Sbjct: 126 RSDKKRPLVYSFAVYWMILTLGPLLAGASLAISSYLLSL------KWINVTGVTSLVDQM 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +L ++ ++ +P + L G + + + +G F Y+ F +Y
Sbjct: 180 LRFFPLLLSWLSFWLLYSIVPTQRVPSRDALTGALVAGLLFELGKKGFALYVTMFPSYQL 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y +LGAE+ ++ Y K+
Sbjct: 240 IYGVLAVIPILFLWVYWTWCIVLLGAEITVTLDDYRQFKR 279
>gi|260599962|ref|YP_003212533.1| hypothetical protein CTU_41700 [Cronobacter turicensis z3032]
gi|260219139|emb|CBA34494.1| tRNA-processing ribonuclease BN [Cronobacter turicensis z3032]
Length = 289
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 95/264 (35%), Gaps = 10/264 (3%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAK 76
E++ +A +++ +LLS+ PF+ L V + VF +
Sbjct: 26 RIDEDNMTTLAGNLAYVSLLSLVPFVAVIFALFAAFPMFSDVSLQLRHFVFANFMPATGD 85
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
I I Q +A +K + + AL S + A+ +LN +R R + + +
Sbjct: 86 IIQRYIEQFVANSSK-MTAVGALGLIVTSLLLMYAIDSALNTIWRSTRKRPKVYSFAVYW 144
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
+ L + + + +I +L ++ +
Sbjct: 145 MILTLGPLLAGASLVISSYLLSLR--------WASGFTTMIDEVLRIFPLLLSWLSFWLL 196
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ +P + L G + + + +G F YI F +Y +Y LA I +++Y
Sbjct: 197 YSVVPTTRVPARDALIGSLVAALLFELGKKGFALYITMFPSYQLIYGVLAVIPILFLWVY 256
Query: 257 MLGVFFILGAELNASMIIYYWRKK 280
+LGAE+ ++ Y ++
Sbjct: 257 WTWCIVLLGAEITVTLGDYRQLRQ 280
>gi|159043554|ref|YP_001532348.1| putative ribonuclease BN [Dinoroseobacter shibae DFL 12]
gi|157911314|gb|ABV92747.1| putative ribonuclease BN [Dinoroseobacter shibae DFL 12]
Length = 318
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 9/257 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ +++ ++ LL++FP + + G + V + +V P+ + I +I
Sbjct: 38 NIGLISAGVAFYGLLAIFPALAAVIAIWGLVADPMVVDQQMALVGELMPQEAYRLIDAQI 97
Query: 83 LQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + L S LAA + + GV AL LN Y +SW +
Sbjct: 98 DALTQTTSSTLGWATLLSILAALWSTRAGVSALMRGLNAIYGTPNRKSWRH-----YLAA 152
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
L + LV+++ V + + V F P L + R + L GL V+ +
Sbjct: 153 LSLTAVLVLVALVALTAVVITPIVLAFLPLGSWTELALRGTRWVVAIGVLLAGLSIVYRY 212
Query: 200 LPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
P K+ + PG I + W ++ F++Y+ F Y+ +Y + +++ L++LY+
Sbjct: 213 GPNRTCVKMQWLTPGSIAVVVLWAAASLGFSYYLSNFGNYNEVYGSIGAVIALLMWLYIS 272
Query: 259 GVFFILGAELNASMIIY 275
+LGA LN +
Sbjct: 273 AFLLLLGAGLNVELERR 289
>gi|94497190|ref|ZP_01303762.1| putative ribonuclease protein [Sphingomonas sp. SKA58]
gi|94423295|gb|EAT08324.1| putative ribonuclease protein [Sphingomonas sp. SKA58]
Length = 303
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 98/274 (35%), Gaps = 7/274 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I+ +++ ++ A LS+ P ++ G +G Q V +
Sbjct: 20 RGWWQILKRVYGKLSTNHISLLSAGVAYYAFLSIAPLLLAVVLTYGLIGDPQLVADNVRS 79
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRV 122
+ P+ AK I ++++ ++ + + A Y ++ A +LN Y
Sbjct: 80 LITVVPQEAAKLIYEQLMAIVTTTKPAVGLGLIFALAFAVYGATRASSATIEALNIIYEQ 139
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E RS + +S G A + +V+ I + +
Sbjct: 140 TEARSIFAFYRVSLGITFSAVLVVVVGVLTASVIGFLETLTN---GWGQIAIFLTKAITW 196
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + ++ F P + + + G + + W++ + + Y+ F Y+
Sbjct: 197 IVAGMFASLIFALIYRFGPHRRKARWRWLTAGSVTATVLWLLSTLAVSFYVSKFGNYNET 256
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L +++ ++LY+ +LGA+LN
Sbjct: 257 YGSLGAVVVLQLWLYVSAFVVLLGAQLNREAERQ 290
>gi|88854744|ref|ZP_01129410.1| membrane protein [marine actinobacterium PHSC20C1]
gi|88815905|gb|EAR25761.1| membrane protein [marine actinobacterium PHSC20C1]
Length = 336
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 100/269 (37%), Gaps = 3/269 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAW 70
A F+ G A+ ++ + L++FP + + G Q V TV+D+
Sbjct: 19 FRRAWHGFLRHRGIDTAATLTFFSALAIFPAALTVVSAFALGQGRIQAVETVLDLAEEIL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + Q+ ++ + G+ I + + + S+ A + N Y V E R
Sbjct: 79 QPDTVDVLEVPLAQLFSIGSPGIALAIGIVLSVWSMSSYATAFGRAANSVYEVHEGRRLV 138
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R + + + + + + P + + + + GR L
Sbjct: 139 KFRGLMLILSVFLIIAFAAVIALLLTTPNVATAIGEALGFGEPWVAVWSYGRWPVLAAIL 198
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ F P + ++ + G +F +W + F Y+ T + Y +Y L
Sbjct: 199 TLIIAVLYYFTPNIRHERMRWVSTGAVFAIATWGLATAAFGLYVSTIANYDRVYGWLGGA 258
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ L++LY+ + + G E++A
Sbjct: 259 LALLIWLYISNLALVAGIEVDAEFTRLRQ 287
>gi|166032624|ref|ZP_02235453.1| hypothetical protein DORFOR_02339 [Dorea formicigenerans ATCC
27755]
gi|166026981|gb|EDR45738.1| hypothetical protein DORFOR_02339 [Dorea formicigenerans ATCC
27755]
Length = 273
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 123/267 (46%), Gaps = 3/267 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++D I + ++ A A+ + +L + P I+ + + + V
Sbjct: 2 KKIKELYDDIMELTGEITKDHVGAYAAQTAFFFMLCMIPIILLLLTMVQYTPVTKA--DV 59
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ V +P + IT + QV + G+ I+ + A + + GV A+ LN Y
Sbjct: 60 MTAVIQVFPSSVDSLITSIVNQVY-NQSSGIIPITIVVALWSAGKGVLAMSSGLNCVYNC 118
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R+++ R+ + Y ++ + ++ + + V ++ + P L N+ + R
Sbjct: 119 RETRNYFFLRIRATVYTVMFILVIIFLLVLSVFGNSLNIFIAEHVPFLRNMADWLIRARN 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T + + + L+ ++ FLP + LPG +F+ + W+V + +F+ Y+ F +S+MY
Sbjct: 179 IITPIVMIVFLLLIYKFLPNRRDTYKRQLPGAVFSTLGWMVISWVFSVYVDVFKGFSSMY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELN 269
L +IM ++++Y ++G ELN
Sbjct: 239 GSLTTIMLIMMWMYFCMYCILIGGELN 265
>gi|332304723|ref|YP_004432574.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332172052|gb|AEE21306.1| ribonuclease BN [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 300
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 101/279 (36%), Gaps = 8/279 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVP 60
R + + H + A H++ +LLS+ PFI+ + A +
Sbjct: 12 RRWLPKANIFARMFVSHCQRDGITVSAGHLAYVSLLSLVPFIMVFFTILSAFPAFSEVRG 71
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++FG + I + + + +K + I L+ + + + +LNR +
Sbjct: 72 DIEALIFGNFIPTSGDQIQGYVAEFVGNASK-MGAIGILSLVVVALLLISNIDKTLNRIW 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R T I + + L + + + + + + +
Sbjct: 131 QAKSERPIIFTFAIYWMILTLGPLLIGLSVIMSSYLVAFANSAEAY------TMGATTAM 184
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+A +++ +P + L G + + + F+ YI F +Y
Sbjct: 185 LKIVPFIASVCAFFIIYMIVPNKRINPRHALVGAFMGALLFELSKKGFSFYITHFPSYQM 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y +A I V++Y+ + +LGAEL + +++ +
Sbjct: 245 IYGAMAVIPILFVWVYLSWIVVLLGAELTHVIEVFFHEE 283
>gi|49474789|ref|YP_032831.1| ribonuclease RNAse BN transmembrane protein [Bartonella quintana
str. Toulouse]
gi|49240293|emb|CAF26771.1| Ribonuclease RNAse bn transmembrane protein [Bartonella quintana
str. Toulouse]
Length = 284
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 109/278 (39%), Positives = 172/278 (61%), Gaps = 1/278 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R+ F + ++ DA+ H+ ++G A ASH++LS LL+ FPF +FG +LA F A + P
Sbjct: 2 LRDIFWYSYRVLVDAVSHYWRDNGSAFASHVALSGLLAFFPFFIFGTSLASFSSAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AAYF+SNG+EALR +LN+AY
Sbjct: 62 QKIKALVQLLPDVIAEPLSKEIINVLTIQRGGVLTVSVIGAAYFASNGIEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS R S +V++ ++ LV++SF+ + PL + ++ + + +I
Sbjct: 122 RVVDRRSLLFCRFQSLFFVIVGAIGLVVISFLLILAPLLIKIMQNHSFFITEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R + LF+ L+ VH +LPA + K + ILPG++ T W + ++ F HY+ F Y +
Sbjct: 182 RYIIAAVVLFVSLLIVHKWLPAGRRKFIDILPGIVVTMFVWFMASIAFAHYLTMF-NYIS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGL SIM ++FLYML FILG E+NA++I Y
Sbjct: 241 TYAGLTSIMVAIIFLYMLSAIFILGGEINAAIIFYRNH 278
>gi|182440418|ref|YP_001828137.1| hypothetical protein SGR_6625 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326781087|ref|ZP_08240352.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|178468934|dbj|BAG23454.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326661420|gb|EGE46266.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 309
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 95/270 (35%), Gaps = 3/270 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ +D A+ ++ A+L++ P ++ ++ G +I + P
Sbjct: 25 LRRTPVSLWNDDITDWAAALTYYAILALLPALLVTVSVIGL-ANPDATGALIADITAFAP 83
Query: 72 EVIAKPITDEILQVLAVPAKGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + +++A + + + + R +++ + V + R
Sbjct: 84 AESGDALRRPLEAATEQRSAVWLLVATGSVSAVWSACSYLAVFRRAMHAMHGVRDTRPPL 143
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I + + L+ +F V ++ + + + +L +
Sbjct: 144 RQAHIIVVSAIGLLLLLMTSAFAIVMTGPLARWLGRRVGLPHEGETLWAALKWPLLVLLV 203
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ + P + + LPG + W+ + LF Y +YS +Y LA ++
Sbjct: 204 ACLIMVLFSTGPRSARGVRRGLPGGVLAAFCWLTASALFALYATQVGSYSRLYGSLAGLV 263
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++++ + + GA+ N + +
Sbjct: 264 VFLIWVWFANLSLLAGAQFNVELRRPEPER 293
>gi|331085373|ref|ZP_08334459.1| hypothetical protein HMPREF0987_00762 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408156|gb|EGG87646.1| hypothetical protein HMPREF0987_00762 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 277
Score = 125 bits (315), Expect = 5e-27, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 129/277 (46%), Gaps = 3/277 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + ++ ++ E A A+ + +LS+ PFI+ L + +
Sbjct: 1 MKETIMKKYRLLNRIMDRISENHTGAYAAQSAFFIVLSMIPFIMLLLALVQYTPVTKA-- 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI V P+ I I + QV ++ + +++ L A + + GV A+ LN Y
Sbjct: 59 DVIRAVTHVLPKTIYPMIVSIVNQVY-NQSQAMISLTGLVAIWSAGRGVLAMSAGLNSVY 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E R++ RL + Y +L + +V+ + ++ +P + ++ +I N
Sbjct: 118 GSKETRNYIYLRLRAAFYTVLFIIAIVLSLVILGFGDRLSIFIVNHYPFMKGIIDLIINI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A+++ L + + ++ FLP K+K + PG T I W + +F+ Y+ F+ +ST
Sbjct: 178 RAVASIVVLTVFSMTIYHFLPNKKTKFIRQFPGAFLTAIGWAAASYIFSAYVNIFTGFST 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
MY + +IM +++LY +LG E+N + ++
Sbjct: 238 MYGSMTTIMLIMLWLYACMYIMLLGGEVNEMLAEDFF 274
>gi|153006923|ref|YP_001381248.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
gi|152030496|gb|ABS28264.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
Length = 487
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 106/274 (38%), Gaps = 6/274 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-- 59
+ V + Y + F++ A+ ++ ++LSV PF+ F + GA++
Sbjct: 33 KAALFRVSRLGYSTVRGFLDNRLTVRAAALTYYSILSVVPFLAFAFAVLKGFGAYRTFIG 92
Query: 60 PTVIDVVFGAWPEVIA--KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
V + + A + + V L + + Y S + V ++ ++LN
Sbjct: 93 EIVRPYLADTFGANPALHQATERILEFVERTDVSRLGALGLVVLVYTSVSLVSSIEVALN 152
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ R + LL + +++ + ++ + V F L I
Sbjct: 153 DVFGAKTTRPFLRQITDY--VTLLVTTPILVFAAATISTAAQSSSVIVFLRERLGLGPAI 210
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + + L ++ LP + + S L G + W VL + +
Sbjct: 211 DFALGFTPVAVVCLALFAMYTILPNVRVRPFSALLGAAVAALGWQGALVLHVQLQMGVAK 270
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y+ +Y+ L+++ LV+ Y+ + ++GAE+ AS
Sbjct: 271 YNALYSVLSALPIFLVWSYVSWLIVLVGAEIAAS 304
>gi|311029165|ref|ZP_07707255.1| ribonuclease BN [Bacillus sp. m3-13]
Length = 274
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 118/270 (43%), Gaps = 2/270 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + M++ ++ LLS+FPF++F L ++ V+ V+
Sbjct: 3 ILRFGKQLFHRLDRNEALGMSAELAYFFLLSLFPFLIFLLTLIAYVPI--TQEDVLGVIH 60
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + ++L L + +A +F+SNG+ A+ + NRA+ V E R
Sbjct: 61 QYAPGDTMLLIESNVSRILNEQRGDLLSFGIIATIWFASNGINAIVRAFNRAFDVNENRH 120
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++I R + L +++ + V ++ + L I R + +
Sbjct: 121 FFIVRGTAILLTLAMVFVIIVALLLPVFGREIGLFIFSSYGLSEEFLTIWNTIRWGVSFV 180
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF ++L P + + +L G F + W+ +VLF++Y+ F Y+ MY L
Sbjct: 181 ILFFVFTCLYLAAPNIRLHLKDVLAGSFFATVGWMTVSVLFSYYVSNFGNYTAMYGSLGG 240
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
I+ LV+ Y+ G+ I+G E+NA ++ +
Sbjct: 241 IIVLLVWFYLSGLMIIIGGEINAILLQWKK 270
>gi|153812966|ref|ZP_01965634.1| hypothetical protein RUMOBE_03373 [Ruminococcus obeum ATCC 29174]
gi|149830913|gb|EDM86003.1| hypothetical protein RUMOBE_03373 [Ruminococcus obeum ATCC 29174]
Length = 320
Score = 125 bits (315), Expect = 6e-27, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 121/270 (44%), Gaps = 3/270 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I ++ E+ A A+ + ++S PF++ L + + + G
Sbjct: 33 LILGFVKRMQEDHIGAYAAQAAYFLIMSFIPFVLVLTALVQYTPL--TYRMLRQAILGFV 90
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + I +V A + L A + S G+++L LN Y V E R+W
Sbjct: 91 PLNLQDFVLKIIAEVFTKSAAVVPISG-LFALWSSGKGMQSLIAGLNVIYHVKETRNWLT 149
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S Y+ L + ++I + V A + P LG +L + + + + + LF
Sbjct: 150 NRLYSMLYMFLFVLAIIISLLLLVMGNRIHAALVIHAPLLGRMLGRLLSAKTFLVFVVLF 209
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + ++ +LP K+ + S +PG ++W + + F+ Y F +S MY L++++
Sbjct: 210 LVFLVLYRYLPNRKASLKSQVPGAFIIAVAWSLFSYFFSLYFTFFPNFSNMYGSLSALIM 269
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++LY+ + GAE+NA + + +
Sbjct: 270 VMLWLYVCMNLLLYGAEINAYFEKEFRQAQ 299
>gi|254512526|ref|ZP_05124593.1| YihY family protein [Rhodobacteraceae bacterium KLH11]
gi|221536237|gb|EEE39225.1| YihY family protein [Rhodobacteraceae bacterium KLH11]
Length = 286
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 90/273 (32%), Positives = 148/273 (54%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ A+ F ++G+ M+SH+++S ++++FPF++F LAG L +I+++F
Sbjct: 12 FLRGLWLAVRRFNNKNGFVMSSHVAMSLMMALFPFVLFTVALAGALSQGYVTDELIELIF 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
GAWP+ +A PI E+ VLA G+ T+ L A YF+SNGV A+R ++ +AY +
Sbjct: 72 GAWPQDVADPIVSELRAVLAGAGSGVITLGGLLAIYFASNGVAAVRQAMTQAYHDHDSWP 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ TRL+ V++ ++ ++ V V +P+ V + + L + R T+
Sbjct: 132 FWKTRLLCIALVIIGGAAILAIAAVEVVLPVYTRLVSEKTAVDVDHWLSVDRLRWTFTVA 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+I HL LP + ++ ILPGV T W G F+ YI F++YS YAGLA
Sbjct: 192 VPAGTVILAHLVLPTRRHRLPQILPGVALTLALWAAGGWGFSVYIAQFASYSATYAGLAG 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M L+FLY+ ILGAE N ++I +K
Sbjct: 252 AMAALIFLYLCSAMLILGAEYNGALIDIQNAEK 284
>gi|228469514|ref|ZP_04054509.1| ribonuclease BN [Porphyromonas uenonis 60-3]
gi|228308953|gb|EEK17622.1| ribonuclease BN [Porphyromonas uenonis 60-3]
Length = 479
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 93/272 (34%), Gaps = 3/272 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y AI+ F+++ + AS ++ LLS+ P + LA G +
Sbjct: 60 RRLYINTLKALYMAIKGFIDQRLSSHASALTYRTLLSIVPMLAIIVALAKGFGLQGTIYD 119
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + V + + Y ++ + + N +
Sbjct: 120 FLMTYMPGHQSEVETIMGFVENYLGQVQGGLFLGVGLVLFLYTIFQLLDTVEQTFNVIWG 179
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS V+L + + + S + V + + +
Sbjct: 180 VPRGRSIGRKLTDYITMVVLLPILMTLSSGLTVMMATIQNTWFNDYIF---FTPLWEFML 236
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + LP K + L + ++ V L+ I+ S Y+ +
Sbjct: 237 KLFPYIILIFMFAGIFIALPNTHVKFVPALISGVIAGSAFQVLQALYVSGILWISKYNAI 296
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y G A+I L++L ++ + A+L S+
Sbjct: 297 YGGFAAIPLLLLWLQVVWTITLFSAKLCFSIQ 328
>gi|325289968|ref|YP_004266149.1| ribonuclease BN [Syntrophobotulus glycolicus DSM 8271]
gi|324965369|gb|ADY56148.1| ribonuclease BN [Syntrophobotulus glycolicus DSM 8271]
Length = 289
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 119/273 (43%), Gaps = 3/273 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I E + + I+ +L+ FPF++F L ++ ++D +
Sbjct: 13 WQFISLFYREITETGLLNLGAQITYYVILAFFPFLIFLLTLTSYINLADV--NILDDLSH 70
Query: 69 AWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + I D + ++++ L ++ LA+ + + NG+ AL +N AY E RS
Sbjct: 71 IVPQESYQIIADTLKEIMSVRRNTTLLSLGFLASLWSALNGIHALMTGMNSAYGKKETRS 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + + S ++++ + +V+ + V +++ L + + I +
Sbjct: 131 FLLQKFTSLNFLIVFFLAIVLSFLLLVLGRELEEFLQILLGNLNMITFLWQKLHIVFQFV 190
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + ++++ +LPG +F I WVV ++ F+ Y+ F+ YS Y +
Sbjct: 191 FLILTFLYLNKLATGKAFTYGQLLPGSLFAAIGWVVISMGFSLYLKYFNNYSPAYGSIGG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ L++LY + G LN+ ++ ++
Sbjct: 251 IIILLLWLYWSSEMILFGCVLNSVIMKVKNPQE 283
>gi|271967030|ref|YP_003341226.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270510205|gb|ACZ88483.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 379
Score = 125 bits (314), Expect = 6e-27, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 86/274 (31%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ +I D+ F DG + ++ LS+ P + L+ L Q + +
Sbjct: 33 WHLIRDSFARFRYGDGMTNSRALAFQICLSIIPGAIALVGLSSVLNQEQLGQVLELTLSR 92
Query: 69 AWPEVIAKPITDEILQVL----AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + + D + + A + ++ + + NR Y V
Sbjct: 93 IAPGAGVEAVKDVLADSHRQAGHTGGTLALWLGLATALFSLTSAMAQVERGANRIYGVER 152
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ + + A + + V V + K + ++ R
Sbjct: 153 DRPFHRKYGKALLMAVTAGAFMTVGFVVMVGGGAIGRALAKVYGWNDGMMDAFTLVRWPV 212
Query: 185 TMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L + + P + + G + + + W V +L Y T+ Y
Sbjct: 213 GFLLALLSASVLFRAAPRRRQPGHTWLAFGALVSLVLWTVFTLLLALYTERSGTFGATYG 272
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L ++M L++ ++ + LG A +
Sbjct: 273 PLTAVMALLLWSFLSSMALFLGLAFAAQLEACRG 306
>gi|325660901|ref|ZP_08149529.1| hypothetical protein HMPREF0490_00261 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472975|gb|EGC76185.1| hypothetical protein HMPREF0490_00261 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 277
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 65/277 (23%), Positives = 128/277 (46%), Gaps = 3/277 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + ++ + E A A+ + +LS+ PFI+ L + +
Sbjct: 1 MKETIMKKYRLLNRIMNRISENHTGAYAAQSAFFIVLSMIPFIMLLLALVQYTPVTKA-- 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI V P+ I I + QV ++ + +++ L A + + GV A+ LN Y
Sbjct: 59 DVIRAVTHVLPKTIYPMIVSIVNQVY-NQSQAMISLTGLVAIWSAGRGVLAMSAGLNSVY 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E R++ RL + Y +L + +V+ + ++ +P + ++ +I N
Sbjct: 118 GSKETRNYIYLRLRAAFYTVLFIIAIVLSLVILGFGDRLSIFIVNHYPFMKGIIDLIINI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A+++ L + + ++ FLP K+K + PG T I W + +F+ Y+ F+ +ST
Sbjct: 178 RAVASIVVLTVFSMTIYHFLPNKKTKFIRQFPGAFLTAIGWAAASYIFSAYVNIFTGFST 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
MY + +IM +++LY +LG E+N + ++
Sbjct: 238 MYGSMTTIMLIMLWLYACMYIMLLGGEVNEMLAEDFF 274
>gi|86608508|ref|YP_477270.1| YihY family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557050|gb|ABD02007.1| YihY family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 324
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 121/288 (42%), Gaps = 18/288 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V+ + A E+ + + +AS ++ S++L++FPFI+ G + Q +++
Sbjct: 30 VWLTLRLAWENAMRYRLFGLASEMAYSSMLALFPFILTLLTGVGLFVGSSEQAFERLMEQ 89
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE- 124
+ P+ + + ++ +GL ++ L + +S + A+ +L+ ++ + +
Sbjct: 90 LSQIAPQEALTLLDRYVRELRFGQNRGLLSLGFLGTLWAASGAMGAVMTALDLSHEIPQD 149
Query: 125 -MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL------------- 170
R ++ +LIS ++L + S +F+ L ++ + L
Sbjct: 150 RRRPFWRRKLISLVWMLATLGLTGLASLIFLFSASFLRFLYRKAGFLAQEVGGPTQLDPL 209
Query: 171 -GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
L + ++ + ++ F P+ + + I PG I + WV +
Sbjct: 210 RELGLNLWGILTWPISLGLVVFSCWVLYRFGPSLRRPQIPIWPGAIVASLLWVGVSWGLR 269
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y+ F ++ +Y + +++ L+++++ + + G ++N ++
Sbjct: 270 IYVEHFGQFNQVYGAVGAVIVLLLWVWLTSLALLFGDQINIALYQAQK 317
>gi|134293178|ref|YP_001116914.1| putative ribonuclease BN [Burkholderia vietnamiensis G4]
gi|134136335|gb|ABO57449.1| putative ribonuclease BN [Burkholderia vietnamiensis G4]
Length = 329
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 100/271 (36%), Gaps = 5/271 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG F G V + +
Sbjct: 42 AFKRFSSDRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFFGDDAARGQVFEQAHQLIGDD 101
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + + G IS A A +S +L +L+ + E R +
Sbjct: 102 AAASIQTIVQNAHRAGSSGGIATLISFAALAIGASATFASLNTALSVIWPSTENRWSSML 161
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ V + + + V + + A+ +V + + I + + + L
Sbjct: 162 GLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFVGTWLLGDSPYVFITNVLQFFVGIAVLA 221
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ + G + + I + G LF Y+ T S + S
Sbjct: 222 GAFAALMKFLPDARVAWRDAMVGGVVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 280
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
L++LY +LGAE A+ + R P
Sbjct: 281 LLMWLYFSAAVLLLGAEFAAARGDAHRRGDP 311
>gi|172056386|ref|YP_001812846.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
gi|171988907|gb|ACB59829.1| ribonuclease BN [Exiguobacterium sibiricum 255-15]
Length = 285
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 67/274 (24%), Positives = 120/274 (43%), Gaps = 6/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ F E + ++ ++ +LS+FPF++F L FL V+D++
Sbjct: 2 SLLKPVFARFFGEAFFDKSAQLAYYLMLSLFPFLLFVVGLVSFLPFTS--GDVLDLIRPF 59
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I ++ + L +IS LAA + +S V++L SLN A V ++
Sbjct: 60 APAETYDLIRKNVVGIFDNGGLKLASISFLAAFWLASMSVQSLVRSLNDALEVTRKVPFW 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALGNLLLIIWNGRIYATM 186
L FG+ + + L + V VA L ++ F + N I + R
Sbjct: 120 RGLLQDFGFTVGMMIILPMSLLVPVAEKLTRRFITHFAIVNDVVTNYSWIWFLFRWGLGS 179
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + I ++ LP+ + + +LPG +F I+W + F++Y F +Y +Y LA
Sbjct: 180 LFLLVFFILLYRVLPSVRLTVRQVLPGALFATIAWQAVSEFFSYY-AEFGSYDRLYGQLA 238
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ + + Y+ V +LG +NA + K
Sbjct: 239 GIIVLMTWFYLSSVVLMLGGLMNAERMRQKKEAK 272
>gi|87198076|ref|YP_495333.1| ribonuclease BN [Novosphingobium aromaticivorans DSM 12444]
gi|87133757|gb|ABD24499.1| ribonuclease BN [Novosphingobium aromaticivorans DSM 12444]
Length = 344
Score = 125 bits (314), Expect = 7e-27, Method: Composition-based stats.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++++ + G A +++ ++++FPF + GA L F G ID V
Sbjct: 49 WEVVKRVWTGVFND-GSIHAGNLAYMIIIALFPFFITGAALFSFFGEASQRAAAIDTVLI 107
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A P V+A I V+ L + + + + VE +R L RAY +
Sbjct: 108 AMPPVVAATIEPAARSVIEARTGWLLWVGGIFGLWTVGSLVETIRDILRRAYGTRWEHAL 167
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ RL+S G L + V +++ F V I A + F P G+L+ + R +
Sbjct: 168 WRYRLMSTGITLASVVLILLAIFAQVLIGAAQEVIEAFLPQFGDLVASLSLSRFVPAFVL 227
Query: 189 LFIGLIFVHLFLP-AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ P A + + PG +F I W+ + + TF +Y Y LA
Sbjct: 228 YAALWLLFISLTPGAYRGRDYPKWPGALFVTIWWIAVTTVLPGMLRTFFSYDLTYGSLAG 287
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
IM L F +++G+ ++GAELNA++ +
Sbjct: 288 IMIALFFFWLVGLGMVVGAELNAALTETPEER 319
>gi|307151617|ref|YP_003887001.1| ribonuclease BN [Cyanothece sp. PCC 7822]
gi|306981845|gb|ADN13726.1| ribonuclease BN [Cyanothece sp. PCC 7822]
Length = 293
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 102/282 (36%), Gaps = 11/282 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
++ ++ + + + +++ +A+ ++ ++S+ P ++ +AG G ++
Sbjct: 3 LRVIIKLLKETFQEWQDDNASRLAASLAYYTIISLAPLLILVIAIAGAVFGEEAARGEIV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G AK I I IS + +S L+ +LN + +
Sbjct: 63 YQIKGLVGLEGAKVIETAIENSSKPELRNMASLISIGVLIFGASGVFAELQDALNFIWEI 122
Query: 123 VEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
S+ R++SF +L L++ + + Y FP L +
Sbjct: 123 KAKPGQGLVSFIRKRILSFSAILGIGFLLLVSLVISAILAALNTYFNYLFPGLN---FVW 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + F+ +LP AK + G I T + + +G Y+ +
Sbjct: 180 QLVNFVVSFAVITLLFAFMFKYLPDAKIGWRDVGMGAILTSLLFSIGKQALGLYLGG-GS 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y S++ LV++Y GAE Y K
Sbjct: 239 FGSTYGAAGSLVVILVWVYYSAQILFFGAEFTQVYARKYGSK 280
>gi|256419458|ref|YP_003120111.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256034366|gb|ACU57910.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 317
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 105/284 (36%), Gaps = 6/284 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
+ + I+ + F+++ +++ +S + S+ P ++ L FLG
Sbjct: 3 IPSIVKTYWQILRQTVNDFMDDKVLKLSAALSYYTIFSIAPMLIVIITLCDVFLGKEAIE 62
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNR 118
+V + A I I + I + +++ ++ S+N
Sbjct: 63 GSVYGQINDMVGNEAALQIQQMIKNAALSGDSTVATVIGIVTLIIGATSVFGEIQDSINF 122
Query: 119 AYRVVEMRS---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+++ + + ++ S+ ++M + + + L + ++
Sbjct: 123 IWQLKAKPKNGLLKMLLNRLLSFSMVVSLGFILMVSLAMNGIIELFSQQLAVLFPQVTMV 182
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+++ + T L + + LP AK + ++ G + T I +++G Y+ +
Sbjct: 183 LVYIVNLALTFLIISFLFAIIFKVLPDAKVRWKHVIVGAVTTAILFMIGKFAIGMYLGS- 241
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S T Y SI+ L+++Y + GAE + ++ K
Sbjct: 242 SKVGTAYGAAGSIVIILLWVYYSAIILYFGAEFTQVYVQHFGGK 285
>gi|116624854|ref|YP_827010.1| tRNA-processing RNAse BN [Candidatus Solibacter usitatus Ellin6076]
gi|116228016|gb|ABJ86725.1| tRNA-processing RNAse BN [Candidatus Solibacter usitatus Ellin6076]
Length = 367
Score = 125 bits (313), Expect = 8e-27, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 102/279 (36%), Gaps = 14/279 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGA 69
+++++ +H+ G + + ++ LLS+ P ++ ++AG G ++ V
Sbjct: 73 LLWESFDHWTIHKGPRLGASLAFYTLLSLTPLVLVIVSIAGLVFGRPAAESQILWEVEDT 132
Query: 70 WPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
I + + L + +S + LR +LN + V
Sbjct: 133 VGPAGRHAIQSLLEGAQHTTHGILATALGLLTLLFGASGVLLELRDALNTIWEVPAHAQN 192
Query: 128 -------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RL SF V+ LV+ V + + PA +L +
Sbjct: 193 GLKSLLQLAKERLFSFALVIATGFLLVVSLIVNAWVAALGRFAAHVLPAPEGVLEVANAL 252
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L + ++ +P + + + G T + + G +L Y+ +T+++
Sbjct: 253 ---VSFLVITALFAAIYRIMPDTRIEWRDVALGATVTSLLFTGGKLLIGLYLGK-ATFAS 308
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y SI+ LV++Y G F LGAE + Y K
Sbjct: 309 TYGAAGSIVALLVWVYYSGQIFFLGAEFTKAFADQYGCK 347
>gi|171058203|ref|YP_001790552.1| ribonuclease BN [Leptothrix cholodnii SP-6]
gi|170775648|gb|ACB33787.1| ribonuclease BN [Leptothrix cholodnii SP-6]
Length = 424
Score = 125 bits (313), Expect = 9e-27, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 105/281 (37%), Gaps = 12/281 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-- 63
D + F E+ AS ++ + +++ P + +
Sbjct: 34 WPWLDTLRTLRLRFREDRLGVTASSLTFTTTIAMVPMATVMFAVFTAFPMFGTFRKALET 93
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ P+ IAKP+ ++ Q A+ A + + + + + + +LN +RV
Sbjct: 94 YLIQNLVPDQIAKPVLLQLSQF-ALKANRVGAVGLVLLGITAIALLLTIDRALNAIWRVR 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L+ + L + L + + A P +L+L + +
Sbjct: 153 QPRPIAQRVLVYWAIATLGPLLLGVSLSITSYALSASKGFVSALPGGVSLMLDLTELALM 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A +A F+P + + + G +F I + + Y+ TY+T+Y
Sbjct: 213 AAGMAALF------RFVPNTPVRWVHAISGGVFVAIGFDLAKRALAWYLGLAPTYTTIYG 266
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA---SMIIYYWRKKP 281
A++ L+++Y+ V +LGA + A S+ + R P
Sbjct: 267 AFATVPILLIWIYLGWVIVLLGAVIAAYAPSLQMRVVRHAP 307
>gi|53805091|ref|YP_113221.1| ribonuclease BN [Methylococcus capsulatus str. Bath]
gi|53758852|gb|AAU93143.1| putative ribonuclease BN [Methylococcus capsulatus str. Bath]
Length = 422
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 91/266 (34%), Gaps = 7/266 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R +V A + ++LL++ P + ++ GAH +
Sbjct: 17 RRGLTLVLRCAVALAGEIRAGGLDYRAMSLVYTSLLALIPLLAVAFSVLKAFGAHTGLEP 76
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + I V + L + L Y S ++ + S N +R
Sbjct: 77 LLSELLDPLGANAEQVKDAIIDSVKRMKVGVLGFLGFLFLFYVSITMLDKIEESFNHVWR 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R+ + + L+ + L+ + G+
Sbjct: 137 TRTSRNLWRRLGDYLSFTLVGPLLLLSAFGSMTG-------LLGRHSGRGSAGWAWSLAE 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A+ + + +P+A+ K+ S L G + W + +F ++ S Y +
Sbjct: 190 HVLPYAAIILAFTLFYWVIPSARVKLRSALFGGVVAGAMWELAGWVFGEFVAGSSQYHAV 249
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAE 267
Y+ A ++ +V+LY+ + +LGA+
Sbjct: 250 YSSFAILVLFMVWLYVSWLIVLLGAQ 275
>gi|22127672|ref|NP_671095.1| ribonuclease BN [Yersinia pestis KIM 10]
gi|45439894|ref|NP_991433.1| ribonuclease BN [Yersinia pestis biovar Microtus str. 91001]
gi|108809505|ref|YP_653421.1| ribonuclease BN [Yersinia pestis Antiqua]
gi|108810420|ref|YP_646187.1| ribonuclease BN [Yersinia pestis Nepal516]
gi|145601117|ref|YP_001165193.1| ribonuclease BN [Yersinia pestis Pestoides F]
gi|270488037|ref|ZP_06205111.1| YihY family protein [Yersinia pestis KIM D27]
gi|294502136|ref|YP_003566198.1| ribonuclease BN [Yersinia pestis Z176003]
gi|21960787|gb|AAM87346.1|AE013982_13 tRNA processing exoribonuclease BN [Yersinia pestis KIM 10]
gi|45434749|gb|AAS60310.1| ribonuclease BN [Yersinia pestis biovar Microtus str. 91001]
gi|108774068|gb|ABG16587.1| tRNA-processing RNAse BN [Yersinia pestis Nepal516]
gi|108781418|gb|ABG15476.1| tRNA-processing RNAse BN [Yersinia pestis Antiqua]
gi|145212813|gb|ABP42220.1| tRNA-processing RNAse BN [Yersinia pestis Pestoides F]
gi|270336541|gb|EFA47318.1| YihY family protein [Yersinia pestis KIM D27]
gi|294352595|gb|ADE62936.1| ribonuclease BN [Yersinia pestis Z176003]
Length = 314
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWP 71
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 41 RMLYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFM 100
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 101 PATGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFS 159
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + A + +I +L ++
Sbjct: 160 FAVYWMVLTLGPILVGASMVISSYLLSL------HWLAHARVDSMIDEILRVFPLLISWV 213
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ +P + L G + + + +G F YI F +Y +Y LA I
Sbjct: 214 SFWLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPIL 273
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y +
Sbjct: 274 FLWVYWSWCIVLLGAEITVTLGEYRAERH 302
>gi|281356223|ref|ZP_06242716.1| ribonuclease BN [Victivallis vadensis ATCC BAA-548]
gi|281317592|gb|EFB01613.1| ribonuclease BN [Victivallis vadensis ATCC BAA-548]
Length = 437
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 42/266 (15%), Positives = 94/266 (35%), Gaps = 1/266 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + Y + + + A ++ L +V P + +A + +
Sbjct: 24 WLGKLSRTFYCSARRYGSDHQSQRAVALTYYTLFAVVPVMALVFGIAKGFSLEDKLQVFL 83
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ F +V+ + + + +A + + + N + +
Sbjct: 84 EEKFANHQDVLNWIYQFADTTLKEAQGGVVAGVGVIALIWTVIWLASNIERAFNAVWNLP 143
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++ + +L+ + LV+MS V + + ++ P LG I+++ I
Sbjct: 144 TRKNMFRRFSDYLAIILVTPIILVVMSSAGVFMRSMMGHILAGMPWLGGAGFILFSIMIK 203
Query: 184 ATMLALFIGLIFVHLFL-PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L L I L + FL P K + S L I + + + F + Y+T+Y
Sbjct: 204 LFPLLLVILLFTLIYFLVPNTKVRFGSALLSGIVAGMLYQLLQDGFIYVQSALYRYNTIY 263
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
A++ L++L + GAE+
Sbjct: 264 GSFAALPLFLIWLQWSWQIALFGAEI 289
>gi|262191240|ref|ZP_06049437.1| ribonuclease BN [Vibrio cholerae CT 5369-93]
gi|262032874|gb|EEY51415.1| ribonuclease BN [Vibrio cholerae CT 5369-93]
Length = 276
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 37/249 (14%), Positives = 83/249 (33%), Gaps = 6/249 (2%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
M +++ LLS+ P + ++ VI A + L
Sbjct: 1 MPGYLAYITLLSMVPMLTVLLSILSSFALFANAGEVIQDFVITHFVPAAGEVVKTALIEF 60
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
+ + + + + +LN +RV + R + + + + L + +
Sbjct: 61 VANTGKMTAVGGAFLFVAAIMLISNIDKNLNYIWRVQQKRRAVFSFSMYWMILTLGPILV 120
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
I L + + + + + ++L +P K
Sbjct: 121 GASIAATSYITSL------KILDNEALSGVYNLFLRWLPFVLSYCAFVGLYLLVPNKKVH 174
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ G + I + + F YI F +Y +Y LA+I V++Y+ + ++GA
Sbjct: 175 WQHAMLGALIAAILFELSKKGFAAYITQFPSYQLIYGALAAIPILFVWVYLCWLIVLVGA 234
Query: 267 ELNASMIIY 275
E+ A++
Sbjct: 235 EVTAALGER 243
>gi|156936163|ref|YP_001440079.1| ribonuclease BN [Cronobacter sakazakii ATCC BAA-894]
gi|166199578|sp|A7MQD5|Y4062_ENTS8 RecName: Full=UPF0761 membrane protein ESA_04062
gi|156534417|gb|ABU79243.1| hypothetical protein ESA_04062 [Cronobacter sakazakii ATCC BAA-894]
Length = 289
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 97/279 (34%), Gaps = 10/279 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ + E+ +A +++ +LLS+ PF+ L V
Sbjct: 11 RRTGPLLAWLKLLWVRIDEDHMTTLAGNLAYVSLLSLVPFVAVIFALFAAFPMFSDVSVQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ VF + I I Q +A +K + + AL S + A+ +LN +R
Sbjct: 71 LRHFVFANFMPATGDIIQRYIEQFVANSSK-MTAVGALGLIVTSLLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + +I +
Sbjct: 130 STRQRPKVYSFAVYWMILTLGPLLAGASLVISSYLLSLR--------WASGFNTMIDDVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L ++ ++ +P + L G + + + +G F YI F +Y +
Sbjct: 182 RIFPLLLSWLSFWLLYSVVPTTRVPARDALIGSLVAALLFELGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I +++Y +LGAE+ ++ Y ++
Sbjct: 242 YGVLAVIPILFLWVYWTWCIVLLGAEITVTLGDYRKLRQ 280
>gi|332300369|ref|YP_004442290.1| ribonuclease BN [Porphyromonas asaccharolytica DSM 20707]
gi|332177432|gb|AEE13122.1| ribonuclease BN [Porphyromonas asaccharolytica DSM 20707]
Length = 484
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 90/272 (33%), Gaps = 3/272 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y AI+ ++++ AS ++ LS+ P + A G +
Sbjct: 62 RRLYINTLKALYMAIKGYIDQRLSRHASALTYRTFLSIVPMLALLVAFAKGFGFQDTIYD 121
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + V + + Y ++ + + N +
Sbjct: 122 FLMTYMPGHQNELDTMMGFVENYLGQVQGGLFLGVGLVLFLYTIFLLLDTIEQTFNVIWG 181
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS V+L + + + S + V + + +
Sbjct: 182 VPRGRSIGRKLTDYITMVVLLPILMTLSSGLTVMMATIKNTWFNDYIF---FTPVWEFML 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + LP + K + L ++ + L+ I+ S Y+ +
Sbjct: 239 KLFPYVILIFMFAGIFMALPNTRVKFLPALISGAIAGSAFQILQALYVSGILWISKYNAI 298
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y G A+I L++L ++ + A+L S+
Sbjct: 299 YGGFAAIPLLLLWLQVVWSITLFSAKLCFSIQ 330
>gi|119947084|ref|YP_944764.1| ribonuclease BN [Psychromonas ingrahamii 37]
gi|288559236|sp|A1T0A0|Y3482_PSYIN RecName: Full=UPF0761 membrane protein Ping_3482
gi|119865688|gb|ABM05165.1| tRNA-processing RNAse BN [Psychromonas ingrahamii 37]
Length = 292
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 93/275 (33%), Gaps = 8/275 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + +++ A H++ LLS+ P + + + +++
Sbjct: 13 KVTYQYLLFVWRRSEQDNIKVPAGHLAYVTLLSIVPLLAVIFYMLAAFPVFSDLKGMLED 72
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + E + K + + + + + + ++NR +R
Sbjct: 73 LIYNNLLPTSGDTIQEHISGFIENTKKMSMMGIGSLIAIALLLISTIDQTINRIWRCTNK 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + I + + L V + + + L
Sbjct: 133 RSRIQSFTIYWTILSLGPVIIGASLALSSYLFSVFQE--------HGSLSFGQRLLSLMP 184
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ ++ V+ +P + L G + I + G LF YI F + +Y L
Sbjct: 185 FILTWLTFAGVYTLVPHQRVSFRYALIGGLIAAILFFFGTDLFRLYITNFPSQQIIYGAL 244
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A I V++Y + ++GAE+ A++ + +++
Sbjct: 245 AVIPILFVWIYYSWLIVLIGAEVTATLEEFLKQQE 279
>gi|119491069|ref|ZP_01623227.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
gi|119453614|gb|EAW34774.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
Length = 290
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 45/282 (15%), Positives = 98/282 (34%), Gaps = 11/282 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVPTVI 63
F +F ++ + + + E+ +A+ ++ + S+ P + + A G ++
Sbjct: 3 FKKIFRLLKETFKEWQEDKSSRLAAALAYYTVFSLAPLLIIVIAIAGAIFGEEAARGEIV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G + A I + I + S + +S L+ SLN + V
Sbjct: 63 GQIQGLVGKDGATVIEEAIQNADRPQISSIASIFSIIFLLIGASGVFAQLQESLNEIWNV 122
Query: 123 VEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ R++SF VL L++ + I Y P + +
Sbjct: 123 KAQPKNGIAGFIRKRILSFSAVLGIGFLLLVSLVLSAVISGISNYFSDLIPGVD---FLW 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + ++ FLP AK + + G + T + + +G Y+ +
Sbjct: 180 QILNFVVSFGVITLLFALMYKFLPDAKIQWSDVWIGSLITALLFTIGKFALGLYLGR-GS 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y S++ L ++Y GAE Y +
Sbjct: 239 FGSTYGAAGSLVIILAWVYYSAQILFFGAEFTQVYARKYGSR 280
>gi|225873491|ref|YP_002754950.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791248|gb|ACO31338.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
Length = 316
Score = 124 bits (312), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/266 (17%), Positives = 98/266 (36%), Gaps = 3/266 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A + + + + SA+LS+FP ++ + + F
Sbjct: 4 HLQRAGWNAFRHSAFQNSKAAAYSAILSLFPTLLAATTILALAPEGDTFLGELRYGFSQI 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-RSWY 129
+ Q + L I+ + + + + AL L RA R+ +++
Sbjct: 64 LPPDTMLLVQAYFQPGKGRSAHLVLIAFGISFFAAMGLMLALMEGLRRAERLPRSAWNFW 123
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIYATML 187
R+++ V V + + + ++ +LL R ++
Sbjct: 124 WQRVVAVLLVAGTLVPMFFATLLITFGHFIEHWIVDSAGHELRFYVLLFWRVIRWGIAVV 183
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ L ++ F + LPG + ++W V +LF Y+ FS Y +Y L +
Sbjct: 184 TSVVMLAMIYHFGVPRRRHWKHALPGAMMATVTWFVSTLLFGWYVTRFSHYQVVYGSLGA 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
M +V+LY++ + + GAE NA +
Sbjct: 244 GMATMVWLYIVSLSILFGAEFNAEVY 269
>gi|89901762|ref|YP_524233.1| ribonuclease BN [Rhodoferax ferrireducens T118]
gi|122478675|sp|Q21U51|Y2991_RHOFD RecName: Full=UPF0761 membrane protein Rfer_2991
gi|89346499|gb|ABD70702.1| tRNA-processing RNAse BN [Rhodoferax ferrireducens T118]
Length = 416
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 97/275 (35%), Gaps = 10/275 (3%)
Query: 1 MREYFCIVFDIIYDAIE-HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+++ + + + E+ AS ++ + +++ P + + +
Sbjct: 23 LKDLTNFPWKSTARTLRERYSEDRLGLTASSLTFTTTMALVPLVTVALAIFTAFPMFAKL 82
Query: 60 PTVI--DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+V+ +V P+ IA+ + + Q A A L + + + +LN
Sbjct: 83 QSVLQKWLVTSLIPDNIARQVLGYLTQF-AGQASKLGGAGIALLLVTAVALILTIDHTLN 141
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+RV RS L+ + + L + L + + A V P
Sbjct: 142 GIWRVRTRRSLGQRVLVYWAALTLGPLVLGVSLSITSYAISASKGVVGVMPGGVQF---- 197
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ G+ ++ F+P K G +F + L Y+ T
Sbjct: 198 --LLDVLQFFMVAWGMAAMYHFVPNTWVKWSHAWAGGMFVSAGLELAKKLLALYLGKVPT 255
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
YS +Y A++ L+++Y+ + +LGA + A +
Sbjct: 256 YSVLYGAFATVPILLIWIYVAWIIVLLGAVIAAYL 290
>gi|186473333|ref|YP_001860675.1| ribonuclease BN [Burkholderia phymatum STM815]
gi|184195665|gb|ACC73629.1| ribonuclease BN [Burkholderia phymatum STM815]
Length = 436
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 101/269 (37%), Gaps = 5/269 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A++ F E AMA+ I+ A S+ P +V ++G F GA + V
Sbjct: 25 AMKQFSENRCAAMAASIAFYAAFSLAPTLVMVIAVSGWFFGAEAARGELFRQVHAVLGND 84
Query: 74 IAKPITDEILQVLAV--PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A +T + IS + A +S +L +LN + V R+ +
Sbjct: 85 AAAAVTTIVQNAHRSGGAGGIAAIISFVLLAIGASATFASLNSALNIVWPSVAPRASSVI 144
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ ++ + ++I ++ L L
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGNWIWGNSPYVVIGNLLQLGVGWLVLA 204
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + FLP A + L G + G LF Y+ ++ + S+
Sbjct: 205 VAFAALLKFLPDAPVRWRDALVGGTVAAALFSAGKKLFALYLAHAGMANS-FGAAGSLAV 263
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY V +LGAE A+ + +
Sbjct: 264 LLMWLYFSAVVLLLGAEFAAARGRMHDPR 292
>gi|163755344|ref|ZP_02162464.1| hypothetical protein KAOT1_07988 [Kordia algicida OT-1]
gi|161324764|gb|EDP96093.1| hypothetical protein KAOT1_07988 [Kordia algicida OT-1]
Length = 315
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ I + + A I+ S +++FP ++F NL ++ F + I +
Sbjct: 35 IYDLMEMYIVGIINGALTSRAGSIAFSFFMAIFPSLLFLLNLLPYVPIDGFQGSFIRAIT 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + + I+ ++ GL + + L + + +NGV A+ +Y +++ R
Sbjct: 95 SLLPDESGNFMNEIIVDIVKNKRGGLLSSTFLLSIFLMANGVSAIFAGFETSYYILKKRR 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF------FPALGNLLLIIWNGR 181
++ L + G L+ ++ L+ V + + + F F I +
Sbjct: 155 FFQQYLYALGVGLILALLLISTVIVLGYTEIYIVRISDFAVKTTGFKISQTNEFWITIAK 214
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ +++G ++ F + PG + T + V+ + LF YI FS Y+ +
Sbjct: 215 FSFLIVMVYLGTAILYYFGTHQGRRAKFFSPGALLTTVLIVLTSYLFGIYIANFSQYNEL 274
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + +++ ++++++ +LG ELNAS+ + +K+
Sbjct: 275 YGSIGALLILMMYIWLNANILLLGFELNASLDMLRIKKE 313
>gi|254786956|ref|YP_003074385.1| tRNA-processing ribonuclease BN [Teredinibacter turnerae T7901]
gi|288559233|sp|C5BNZ4|Y3006_TERTT RecName: Full=UPF0761 membrane protein TERTU_3006
gi|237684892|gb|ACR12156.1| tRNA-processing ribonuclease BN [Teredinibacter turnerae T7901]
Length = 428
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 28/280 (10%), Positives = 94/280 (33%), Gaps = 8/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
+ ++ + F E A+ ++ L ++ P + + + A V
Sbjct: 13 KRIRGVLLQFSKELFFEFNERGCQRSAAALTYMTLFALVPLMTVTYTMFSAIPAFDGVGD 72
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++F + + ++ + + A+ L + + + + + + N +
Sbjct: 73 QLNGLIFHHFLPETGEEVSQYLSDF-SSQARRLSGVGVVMLLVTAYLMLRNIETTFNSIW 131
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + RS L+ + + + + + + + + + L ++
Sbjct: 132 GVKQARSGLSGYLLYWAILSVGPILVAAAFLLSTYLLSVQIMLED-----LDGLGVMQLV 186
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + +P + G + T ++ V +F + + S++
Sbjct: 187 YRVVPWALTSAAFTLLFVAVPNCRVPFKFGAIGGVITAFAFEVVKAVFGYIVAN-SSFKL 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y A + L+++ +L + GA ++ + + +
Sbjct: 246 IYGAFAVVPLFLLWVNLLWTIILGGAVFVRTLAEHSYASR 285
>gi|296282984|ref|ZP_06860982.1| hypothetical protein CbatJ_05158 [Citromicrobium bathyomarinum
JL354]
Length = 344
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 119/277 (42%), Gaps = 2/277 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ +++ + + G+ A +++ A+L++FPF + GA + G I+
Sbjct: 46 YFRSYEVARRVLVGTFND-GFLYAGNLAYLAMLAIFPFFITGAAIFAAFGESSERAASIN 104
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ A P V+A+ I V+ L L + + +E +R L R+Y
Sbjct: 105 ALLLAMPPVVAEVIEPVARNVIDARQGWLLWAGGLLGLWTVGSLIETIRDLLRRSYGTEA 164
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
++++ RL S G ++ A + L++ V I A + +FP L + L + R
Sbjct: 165 TQAFWRYRLASTGIIIAAVIVLMLSLIAQVMIGTAQQIIAAYFPPLSDALGKLALARFVP 224
Query: 185 TMLALFIGLIFVHLFLP-AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ P + K PG + + WV V + +F +Y+ Y
Sbjct: 225 GFGLFGSFYALFYVLTPGQYRKKRYPKWPGALAVTLWWVGVTVALPQVLRSFFSYNLTYG 284
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I+ L+F +++G+ ++GA+LNA++ ++
Sbjct: 285 SLAGIIITLLFFWLVGLGVVIGAQLNAALAETPEEER 321
>gi|332662794|ref|YP_004445582.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
gi|332331608|gb|AEE48709.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
Length = 344
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 116/279 (41%), Gaps = 9/279 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---------HQF 58
+++++ I+ D + A+ I+ S LS+FP ++ L +L F
Sbjct: 41 IYNVVKFFIQEVQRFDLFTRANSIAYSFFLSLFPSLIALFTLIPWLKRTFLHYLPEGENF 100
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + + P K + I + P L +I ++A YFSSNG+ +L S ++
Sbjct: 101 DHFLQNEIQKIMPGDAGKQLFGFIEDITNNPRIALLSIGFVSAIYFSSNGILSLLRSFDK 160
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y + + R ++ S L+ + + + + + +
Sbjct: 161 TYEDFAKWNSWKMRWVAILLTFQLSGLLIASVILVILGQSFIKTINNWLNLSFLAEQSLN 220
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R A + ++ + ++ A K PG ++ +V+F+ Y+ F+TY
Sbjct: 221 MVRWLAIIALYYVSIALIYRNGAAMIRKFKFFTPGAALASTLCLLSSVIFSMYVDMFNTY 280
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +Y + +I+ ++++ M + ++G ELNAS++I
Sbjct: 281 NRLYGSIGAIIVLMLWIQMNVMSILIGFELNASIVINKR 319
>gi|313886527|ref|ZP_07820243.1| YihY family protein [Porphyromonas asaccharolytica PR426713P-I]
gi|312924073|gb|EFR34866.1| YihY family protein [Porphyromonas asaccharolytica PR426713P-I]
Length = 484
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 90/272 (33%), Gaps = 3/272 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + +Y AI+ ++++ AS ++ LS+ P + A G +
Sbjct: 62 RRLYINTLKALYMAIKGYIDQRLSRHASALTYRTFLSIVPMLALLVAFAKGFGFQDTIYD 121
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + V + + Y ++ + + N +
Sbjct: 122 FLMTYMPGHQNELDTMMGFVENYLGQVQGGLFLGVGLVLFLYTIFLLLDTIEQTFNVIWG 181
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS V+L + + + S + V + + +
Sbjct: 182 VPRGRSIGRKLTDYITMVVLLPILMTLSSGMTVMMATIKNTWFNDYIF---FTPVWEFML 238
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + + LP + K + L ++ + L+ I+ S Y+ +
Sbjct: 239 KLFPYVILIFMFAGIFMALPNTRVKFLPALISGAIAGSAFQILQALYVSGILWISKYNAI 298
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y G A+I L++L ++ + A+L S+
Sbjct: 299 YGGFAAIPLLLLWLQVVWSITLFSAKLCFSIQ 330
>gi|212638170|ref|YP_002314690.1| ribonuclease BN-like family enzyme [Anoxybacillus flavithermus WK1]
gi|212559650|gb|ACJ32705.1| Ribonuclease BN-like family enzyme [Anoxybacillus flavithermus WK1]
Length = 277
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/264 (24%), Positives = 126/264 (47%), Gaps = 2/264 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I F ++ + ++ F E++ + +++ ++ LLS+FPF++F +L VI
Sbjct: 3 ISFSVVRELMKRFDEDEIFDLSAELAYFFLLSLFPFLLFLLTFLSYLPIPH--EDVIAFF 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P A I + Q++ + + S LA + +SNG+ A+ +LNRAY V E R
Sbjct: 61 SQYAPSETAHLIETNVKQLMESQSGKWLSFSVLATVWAASNGMSAIIRALNRAYDVKETR 120
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+++ R +S +++ V + ++ F L + R + +
Sbjct: 121 SFFVARGVSILLTFAMIFVIIVALIFPVFGKMIGTFLFSAFGLSDVFLHVWETIRWFVSF 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ LF +++F P+ + + G +F + W++ ++ F+ Y+ F YS MY L
Sbjct: 181 VILFFVFSVLYVFAPSKYVRFRDVWSGALFATVGWMIVSLAFSSYVNQFGNYSAMYGSLG 240
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
I+ +V+ Y+ G+ +LG ELNA
Sbjct: 241 GIIALMVWFYLSGMMIVLGGELNA 264
>gi|238755595|ref|ZP_04616932.1| tRNA-processing ribonuclease BN [Yersinia ruckeri ATCC 29473]
gi|238706195|gb|EEP98575.1| tRNA-processing ribonuclease BN [Yersinia ruckeri ATCC 29473]
Length = 294
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 100/281 (35%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ ++ +A H++ +LLS+ P + L +
Sbjct: 9 LPSPLKPCVSFGRMLCRRIDQDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPIFTEIS 68
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ VF + I + I Q +A ++ + T+ + + ++ LN
Sbjct: 69 IQLKSFVFANFMPSTGHVIQNYIEQFIANSSR-MTTVGTCGLIVTALLLIYSVDSVLNTI 127
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R RS + + + + L + + + + + A + +I
Sbjct: 128 WRSKNKRSMVFSFAVYWMVLTLGPILVGASMAISSYLLSL------NWLAATGMNRLIEQ 181
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L +I ++ +P + + L G + I + +G F YI F +Y
Sbjct: 182 VLRIFPLLLSWISFWLLYSVVPTVQVPVKDALVGALVAAILFELGKKGFALYITLFPSYQ 241
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y +LGAE+ ++ + + ++
Sbjct: 242 LIYGVLAVIPILFLWVYWSWCIVLLGAEITVTLGEHRFLRR 282
>gi|153956022|ref|YP_001396787.1| hypothetical protein CKL_3414 [Clostridium kluyveri DSM 555]
gi|219856362|ref|YP_002473484.1| hypothetical protein CKR_3019 [Clostridium kluyveri NBRC 12016]
gi|146348880|gb|EDK35416.1| Hypothetical protein CKL_3414 [Clostridium kluyveri DSM 555]
gi|219570086|dbj|BAH08070.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 275
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 122/270 (45%), Gaps = 2/270 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F+ + I F+E+D A+AS ++ S + S FPF++F ++ G+ ++ +
Sbjct: 8 FNGLRAFIFRFIEDDVLALASQLAYSLIFSFFPFLIFIISIIGYSDI--SSSNILSSLSY 65
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
PE I + I I+++ L S + SS G ++ LN+AY E RS
Sbjct: 66 ILPENILQLIKTTIIRITDTRDIKLLFSSLALTIWSSSGGFHSVIKGLNKAYNKKESRSV 125
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
IS L +V ++I + V + +++ + R + +
Sbjct: 126 LKIYAISMVCTLGITVIIIITILLLVFGQIIGSFLAFNLGFSKEFNFMWNIFRYLMILFS 185
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
V+ + P K + ++PG F+ + V+ ++ F Y+ F++YS +Y + +
Sbjct: 186 TIFIFSAVYRYTPNVKLRWREVMPGAFFSTVGIVIASMGFAFYVNNFASYSIIYGSIGAA 245
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + +L++L V ILG E+N+ + I+ +
Sbjct: 246 IMLMTWLFILSVITILGGEINSVLFIHKSK 275
>gi|220924378|ref|YP_002499680.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
gi|219948985|gb|ACL59377.1| ribonuclease BN [Methylobacterium nodulans ORS 2060]
Length = 293
Score = 124 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 105/270 (38%), Positives = 152/270 (56%), Gaps = 1/270 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F+I A + FV DGWA+ASHI+LS L S+FPF++ LA G+
Sbjct: 2 RIRTAFEIAAIAAQRFVAHDGWAIASHIALSLLTSLFPFLILLTALASVFGSKSLADEAS 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+++F WP +A P+ E+ +VL GL T+ AL A YFSS+GVE+LR+ LNRAY +
Sbjct: 62 NLLFEVWPSEVAGPVATEVHRVLTEQRGGLLTVGALLALYFSSSGVESLRVGLNRAYGLR 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E+R W++TRL S GYV+ A+ ++ +F+ V PL + P L L L I R++
Sbjct: 122 EVRPWWLTRLESIGYVICAAFAMLAFTFLVVLGPLMWRGLILVAPGLEPLGLTIAVVRVF 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMY 242
T L + + L+ H F+ A + +LPGV T WV+ + F Y+ FS Y + Y
Sbjct: 182 LTALLIALVLVIAHKFIAAGRRPWHMVLPGVAVTLGMWVLAGLGFGMYLDRFSGAYVSTY 241
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASM 272
GLA+ M LVFLY L F+ G E+N ++
Sbjct: 242 GGLATAMVFLVFLYWLAAMFLFGGEINGTI 271
>gi|262384225|ref|ZP_06077360.1| ribonuclease BN [Bacteroides sp. 2_1_33B]
gi|262293928|gb|EEY81861.1| ribonuclease BN [Bacteroides sp. 2_1_33B]
Length = 414
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 99/271 (36%), Gaps = 3/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+E + + + A+ F E+ AS ++ S LLS+ P + +A G V
Sbjct: 1 MKEIYINIIKTVILAVRGFQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFGFQGTVR 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ F + K + + + + Y N + ++ + N +
Sbjct: 61 QELFDYFPGHEMELNKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLISSVEDTFNDIW 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ + R WY L+ V + S + + + + ++
Sbjct: 121 QIQKSRPWYRKISDYLALFLVLPVLMTASSGLSIFMSTLQNSFLGQYLF---FTPLVELF 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + +++ LP K + ++ L ++ + ++ + S Y+
Sbjct: 178 LHIAPYIITTLAFTGLYVSLPNTKVRFVNGLVAGFIAGCAFQLFQFIYISGQIWVSKYNA 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A++ L++L + + + GAEL+ +
Sbjct: 238 IYGSFAALPLLLLWLQLSWLICLFGAELSYA 268
>gi|194291449|ref|YP_002007356.1| ribonuclease bn [Cupriavidus taiwanensis LMG 19424]
gi|193225353|emb|CAQ71297.1| Ribonuclease BN [Cupriavidus taiwanensis LMG 19424]
Length = 339
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 105/280 (37%), Gaps = 6/280 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
++ ++ D + +V++ +M + ++ + S+ P ++ ++AG G V+
Sbjct: 13 RALYGLLRDTVNAWVDDYAPSMGAALAYYTVFSIAPLLLIVISVAGVVFGHDAARGEVVA 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
+ G AK I +L V A L + + ++ L+ +L+R + V
Sbjct: 73 QLQGLLGPEGAKTIEAMLLAVSKPAASALTAVVGVVVLLVGATTVFAELQSALDRIWEVP 132
Query: 124 EMRS---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E R + + ++ + A R + P G LI
Sbjct: 133 ERRKTSGIFALLRARLLSFGMILGIGFLLVVSLLLSAAISALNRLWGPLFGAEELIAHVL 192
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ + + ++ +P AK + + G T + + +G + YI +
Sbjct: 193 DTVVSLVLITVVFAMIYKIMPRAKVRWPDVWLGAAVTALLFTLGKFVIGLYIGKSGVANG 252
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y S++ L+++Y F+LGAE Y ++
Sbjct: 253 -YGAAGSLVVLLLWVYYSAQIFLLGAEFTWQYARRYGSRR 291
>gi|312797015|ref|YP_004029937.1| ribonuclease BN [Burkholderia rhizoxinica HKI 454]
gi|312168790|emb|CBW75793.1| Ribonuclease BN (EC 3.1.-.-) [Burkholderia rhizoxinica HKI 454]
Length = 355
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 109/282 (38%), Gaps = 6/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
MR + + D + +++++ MA+ I+ S+ P +V +AGF G
Sbjct: 72 MRSRAMDLLAWVSDPVTYWIKDRCPTMAASIAFYTAFSLAPTLVIVIAVAGFFFGQDAVQ 131
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNR 118
+ + G + A+ + + T+ S L +S L +LN
Sbjct: 132 GRLFGEIRGVVGDEAAQGVQAIVANAWHADRATHTTMVSILGIVIGASATFSTLNSALNA 191
Query: 119 AYRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ V E R+ ++ + + + + V + + ++ +F + +
Sbjct: 192 IWPVPEPDTRASLLSVVRVRLISFGLVLGVAFLIVVLLILDTVISVAGHWFWGPQSASYL 251
Query: 177 I-WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I + AT+ +L++ + F+P A + L G + + + G +F Y+
Sbjct: 252 IANAVQHVATLGSLWLAFSAMLKFVPDASLQWRDALAGGLAAALLFSGGKNIFAFYLAHV 311
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
T + + S+ L++LY F+LGAE++A+
Sbjct: 312 GTAN-TFGAAGSLAVLLMWLYFSSSVFLLGAEVSATAARRRN 352
>gi|313889055|ref|ZP_07822713.1| YihY family protein [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312844928|gb|EFR32331.1| YihY family protein [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 304
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 7/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F I ++ D + ++ +LS+FPF++ N F G P + +
Sbjct: 14 FTFFDKLIYRVLDHDTLSYGGSLTYFLILSIFPFLISLINAINFSGI--LDPEYLYGLLD 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P I + I + + ++ + TIS +A + +S V L +N++Y VE R +
Sbjct: 72 VLPGEIQEIIRNFLNELHMSSSGSFLTISFVAGLFTASTAVFKLMKIINQSYGFVESRGF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG-NLLLIIWNGRIYATML 187
RL++ + L + + ++ + + V + + I + +
Sbjct: 132 LAQRLMALFFTLALILMIFLLVLTQIFGQIIYVKVMSYLGIENASFDKIWSIAKNAIPLA 191
Query: 188 ALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ I I ++ F P+ I S+LPG IF + ++ + F Y+ F YS Y
Sbjct: 192 YMLITFILLYKFSPSKSRENMITIKSVLPGSIFATLGLIIASSGFNFYVSNFGKYSITYG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L I+ L++LY+L ++GAE+N+++ K
Sbjct: 252 SLGGIIVFLIWLYLLSTITLVGAEINSTLYSMRNFK 287
>gi|149279126|ref|ZP_01885259.1| hypothetical protein PBAL39_07500 [Pedobacter sp. BAL39]
gi|149230128|gb|EDM35514.1| hypothetical protein PBAL39_07500 [Pedobacter sp. BAL39]
Length = 315
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 106/282 (37%), Gaps = 10/282 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVI 63
F +++++ +A F + ++ ++ + S+ P +V +L G FLG +
Sbjct: 10 FKGIWEVLKNAFTGFSDHKVTKLSGSLAYYTVFSMAPLLVVIISLCGIFLGQEAAQGQIY 69
Query: 64 DVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G A + + I + + F I + S+ ++ S+N + +
Sbjct: 70 SQLSGFLGPDTAAQLQEIIKKASLGDKSTVAFVIGVVTLLVGSTTVFADIQDSINTIWGL 129
Query: 123 VEMRSWYITRL-----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+L +SF ++ L++ + + ++ F + + I
Sbjct: 130 KPKPKRGWLKLLQNRFLSFSVIISLGFILLVSLGITALLDGFSERLQARFSDISVIFFYI 189
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N T+ + + + LP A K ++ G I T + +++G + YI S
Sbjct: 190 LN--QVITLAVISLIFGVIFRVLPDAIIKWKDVILGSIVTAVLFMIGKFGISIYIGQ-SD 246
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y S++ L++ Y + GAE + + Y +
Sbjct: 247 VGSTYGAAGSLVIVLLWTYYSSIILYFGAEFTKAYAMAYGSE 288
>gi|332701658|ref|ZP_08421746.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
gi|332551807|gb|EGJ48851.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
Length = 453
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 100/269 (37%), Gaps = 4/269 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + FV + A+ ++ + +LS+ P + +++ LG H
Sbjct: 32 RRVLTLIRWAHLVLLGFVRDKCHLRATALAYATILSLAPLMAVALSISKALGLHD--SAF 89
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I + + V + L + L + V + + N + V
Sbjct: 90 IRAALLRITAGREELARTILHFVETSSVRTLGYLGTLVLIAMAVAMVITVENAFNAIWGV 149
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
RS + F ++L+ + + + V++ + + L +
Sbjct: 150 ARGRSLWRKFTDFFSVLVLSPLLVFLAVSFTVSLQ--SEALVQRMLEFTALNYLHLLALK 207
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A + +++ +F++ F+P K ++ S G + W + ++ + V+ + Y +Y
Sbjct: 208 LAPYVMVWLAFLFLYSFMPHTKVRLRSAAVGAVLAGTLWQLAQWVYIRHQVSLTDYGAIY 267
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
A L+++Y+ V +LG E++ +
Sbjct: 268 GSFAQFPLFLIWMYISWVIVLLGGEISYA 296
>gi|238921698|ref|YP_002935213.1| ribonuclease BN [Edwardsiella ictaluri 93-146]
gi|238871267|gb|ACR70978.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 292
Score = 123 bits (310), Expect = 2e-26, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 98/279 (35%), Gaps = 8/279 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ + ++ +A ++ +LLS+ P I +L V
Sbjct: 7 KRIKGWVCFAKVLWQRVDDDRMTMVAGSLAYVSLLSLVPLITVVFSLFTAFPMFASVSFQ 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + + + Q +A +K + + + + + ++ +LN +R
Sbjct: 67 LKRFIFTNFMPAAGDVVQSYLEQFVANSSK-MTALGTIGLIVTALLLISSVDGALNHIWR 125
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R+ + + + + L + + + + + A + ++
Sbjct: 126 SERKRAVVYSFAVYWMILTLGPLLVGASMAISTYLLSL------RWLADSAVYSMVDQLL 179
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L + ++ +P + + L G + + +G F YI F +Y +
Sbjct: 180 RLFPLLLSCVSFWLLYCIVPTQRVPMRDALVGAVVAGGLFELGKKAFALYITAFPSYQLI 239
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA I V++Y +LGAE+ ++ + ++
Sbjct: 240 YGVLAVIPMLFVWVYWSWCIVLLGAEVTVAIGDFRAHRR 278
>gi|291165672|gb|EFE27720.1| YihY family protein [Filifactor alocis ATCC 35896]
Length = 298
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 111/268 (41%), Gaps = 3/268 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ +V ++ + ++ +LS+FPF++ + G + + + + +P
Sbjct: 24 FKCLAKRYVADNLSQLGGQLAYFFILSLFPFLIAVNGILGRFDLN--IKEQLGNLSHFFP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + + + +F +S + + +++ + +L SLN A+R E
Sbjct: 82 DNVIYVLQQYLSHLSHSDHNKMFVMSMIIMIWMATSAIRSLLFSLNHAFR-SERPLSLQK 140
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+L SF V+L + + + A V +FF + + R +
Sbjct: 141 QLASFPLVVLMILFIFVSLISSSIGKNACETVLRFFKLNQDWTDVWQIIRWIIPFFGVVT 200
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++ +P + G +F+ W+V +++ + Y F YS +Y L +I+
Sbjct: 201 IVFLLYNIIPDRNFPRKYTIIGALFSVSLWIVTSMILSFYTSNFGRYSIIYGSLGAIIIM 260
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L+FLY G+ +LG EL + + ++
Sbjct: 261 LLFLYWSGIIIVLGGELAHILAMRSQKR 288
>gi|114776998|ref|ZP_01452018.1| Ribonuclease BN [Mariprofundus ferrooxydans PV-1]
gi|114552519|gb|EAU54979.1| Ribonuclease BN [Mariprofundus ferrooxydans PV-1]
Length = 460
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 99/264 (37%), Gaps = 2/264 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + + F+E + + + LLS+ P + ++ G +
Sbjct: 34 KVLLTRMLQVSFAVVRDFLEGQLTLRSMSLVYTTLLSLVPLLALTFSVLKGFGVQNQLEP 93
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ A + + + V + L ++ Y + + + S N +
Sbjct: 94 MLVNTLSALGDKGEEIARQIVGFVDNIKVGVLGSLGLGMLIYTVISLLHKIEKSFNYIWH 153
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R +L+ + + + ++ + V + ++ L L++ +
Sbjct: 154 IEQARPLGQRFSEYLSVILVGPLLIFSALGMTASLMN--SNVVEALASMPLLGLVVHSIG 211
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + FV++F+P + KI L G ++W F ++ Y+ +
Sbjct: 212 KLIPYALVIVAFTFVYIFMPNTRVKIGPALIGGTVAGVAWETAGWAFGAFVANSGNYTAI 271
Query: 242 YAGLASIMTCLVFLYMLGVFFILG 265
Y+G A ++ +++L++ + +LG
Sbjct: 272 YSGFAILIMFMIWLFISWLILLLG 295
>gi|73538237|ref|YP_298604.1| ribonuclease BN [Ralstonia eutropha JMP134]
gi|72121574|gb|AAZ63760.1| Ribonuclease BN [Ralstonia eutropha JMP134]
Length = 427
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 106/273 (38%), Gaps = 6/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFG 68
++ ++I ++++ +M + ++ + S+ P ++ ++AG G V+ + G
Sbjct: 20 QLVRESINSWIDDYAPSMGAALAYYTVFSIAPLLMIVISIAGVIFGPDAARGEVVGELNG 79
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A+ + + ++ V A + + LA ++ L+ +L+R +RV +
Sbjct: 80 LIGSEGAQAVEEMLVAVSKPAASTVTAILGVLALLVGATTVFSELQSALDRIWRVPQPEK 139
Query: 128 W---YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ + ++ + A R++ P LG +
Sbjct: 140 ISGLFSLIRSRLLSFGMILGMGFLLVVSLLLSAGISAMGREWGPLLGIREAVGHVLDTVV 199
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+++ + ++ F+P K + + G + T + +G L YI S ++ Y
Sbjct: 200 SLVLTTVVFAMIYKFMPRTKVRWFDVWLGAVVTAALFTLGKFLIGLYIGK-SGVASGYGA 258
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S++ L+++Y F+LGAE +
Sbjct: 259 AGSLVVLLLWVYYAAQIFLLGAEFTWHFAQRFG 291
>gi|333023667|ref|ZP_08451731.1| putative integral membrane protein [Streptomyces sp. Tu6071]
gi|332743519|gb|EGJ73960.1| putative integral membrane protein [Streptomyces sp. Tu6071]
Length = 429
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 104/276 (37%), Gaps = 13/276 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQF 58
+ ++ D + +E +A+ + LLSV P ++ L G++ F
Sbjct: 5 RTAWLLVKDTVNSCMEYRILGLAAEAAFFTLLSVPPLLLCLVGLLGYVDAWTGADTIAGF 64
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+D + I + I + + + +I + A + S V ++
Sbjct: 65 EQHFLDASRTVLSDQGVHDIAEPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITV 124
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y + +R TRL+SFG ++ + I + VA P + ++ + +
Sbjct: 125 MYGLDGVRGIVATRLLSFGLFIVGLLVCSIALPLMVAGPDTVVHLLPWSGL------AVQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
++ + L ++ +S + +PG W V + Y+ +
Sbjct: 179 ILYWPVVIILCVVFLTTLYHVSVPVRSPWIEDVPGSFVALAMWFVCSFALRIYLTSTIEG 238
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 239 PTIYGSLAAPVAVLLWIGVSAFAVLVGAAMNAAIDR 274
>gi|91777652|ref|YP_552860.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|91690312|gb|ABE33510.1| Ribonuclease BN [Burkholderia xenovorans LB400]
Length = 324
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 99/280 (35%), Gaps = 5/280 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R +F I +A+ F + +A+ IS A S+ P ++ + G F G
Sbjct: 31 RRRSGSIFHIAVEAVSRFASDRCTTLAASISFYAAFSLAPTLLIVLTVTGWFFGEAAARG 90
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNRA 119
+ V A + + GL + ++ +S +L +L+
Sbjct: 91 KLFAQVHDILGNDAAGAMQAVVESAHRASGGGLAALLSIVLLVIGASATFSSLNTALDVV 150
Query: 120 YRVVEMRSWYITRL--ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ L + + + + V + + A+ +V + L++
Sbjct: 151 FAAKPKAGLAGLALLVRARLISFGLVLGVGFLLVVSLVLDTAITFVGQRLFGESPLVIAA 210
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ L + +LP + G I + + + VG LF Y+ T
Sbjct: 211 QIAQTVFGIVVLSAAFTAMLRWLPDTHVPFRHAMTGAIVSAVLFSVGRRLFGLYLAHAGT 270
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ + S+ +++LY F+LGAE+ ++M
Sbjct: 271 ANS-FGAAGSLAVLMLWLYFSAAVFLLGAEVASAMDGERQ 309
>gi|229916931|ref|YP_002885577.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229468360|gb|ACQ70132.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 281
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 115/277 (41%), Gaps = 3/277 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F +F + D F + ++ ++ L++FP V + + + +I+
Sbjct: 2 FESMFRLAVDVRHRFKDHHINDYSATLAFFWFLAIFPTFVVLFAVMAWFQIDDAL--LIE 59
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + + + V GL ++SA+ A + +SNG L AY E
Sbjct: 60 QIETLIPGSSVRELLSIVYDVSGNLNGGLLSVSAIIAFWSASNGTARLVKLTVFAYGETE 119
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + RLI +L S+ VI+ + + + +P + + R
Sbjct: 120 ARGYIFRRLIGLLVILAGSIGAVILIVFHLFGQEFVELIYALYPQVEEFDRLSTVTRYTV 179
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + L I + P + + + LPG +F ISW + + ++ Y+ FS Y
Sbjct: 180 STIILIIAFSLFYKIAPQQRVRFIETLPGAVFAVISWQLLSTGYSIYVERFSILGDTYGT 239
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ +++ ++LY+ ++GAE+NA+ Y+ ++P
Sbjct: 240 IGAVILLQIWLYLTAATMLIGAEINAAWP-YHMTRQP 275
>gi|254447893|ref|ZP_05061358.1| ribonuclease BN [gamma proteobacterium HTCC5015]
gi|198262673|gb|EDY86953.1| ribonuclease BN [gamma proteobacterium HTCC5015]
Length = 445
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 98/270 (36%), Gaps = 5/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVP 60
+ +Y I+ A + + LLS+ P + ++ G H +
Sbjct: 27 KRLGLGTLRYLYVLIDDIAGGQLTMRAMSLVYTTLLSIVPLLAVSFSVLKAFGVHNKQLE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + + + I + + L + Y + + V+ + + N +
Sbjct: 87 PLMLQFLEPLGQQGVEITSKVIGFIDNIDIGVLGVFGVVLLFYTAISLVQKIEATFNFVW 146
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R+ E RS +L+ + + + + + + + + ++ G
Sbjct: 147 RLQESRSLGRRFTDYGSVMLIGPLLVFSAIGMSAK--VLNDEIVRSATEVALVGDLVNLG 204
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS--TY 238
L + F ++F+P + K+ + + + + W F +IV+ + +
Sbjct: 205 TRALPYLMIMAAFSFFYVFIPNTRVKLKAGIIAGVISGFLWQSLGWAFGSFIVSSTDNST 264
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y+G A ++ ++++Y+ + ++G +
Sbjct: 265 YAIYSGFAILIIFMMWIYISWLILLIGGSI 294
>gi|116619409|ref|YP_821565.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116222571|gb|ABJ81280.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 283
Score = 123 bits (309), Expect = 3e-26, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 110/281 (39%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR ++ ++ + +++ + A + SALLS FP + A + A
Sbjct: 1 MRLTPRNFAWLLRRSLLNTLDDGCFGFAKGAAYSALLSFFPVLTSAATILVQTRAGFVSA 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T+ + P + + +V+ GL ++ L + + +S +++L AY
Sbjct: 61 TLQSFLSQIVPPGTEDLVVQQF-RVMGERPFGLLVVAGLISLWAASGVIKSLIEGFQAAY 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV RS+ ++ VLL++V L+ S + V V + L + W
Sbjct: 120 RVPRNRSFLHQSGVAMSLVLLSAVPLICASLLLVFGNQVERAVLNWMKVDPFLNPVAWVW 179
Query: 181 -------RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
R ++ + P K + + G I + W + F Y+
Sbjct: 180 QFVSRMARYLLAFATTIAVTASLYYYGPYRKQRWRYVWRGAILATVLWFFATLGFAWYVR 239
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ Y+ MY + + + LV++Y++ + ++G E NA +
Sbjct: 240 NIARYNVMYGSIGAGIALLVWMYLIALIALMGCEFNAELER 280
>gi|289583130|ref|YP_003481596.1| ribonuclease BN [Natrialba magadii ATCC 43099]
gi|289532683|gb|ADD07034.1| ribonuclease BN [Natrialba magadii ATCC 43099]
Length = 378
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/267 (18%), Positives = 90/267 (33%), Gaps = 15/267 (5%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + E++ MA+ I+ A +S+ P +V + LG QF V
Sbjct: 5 FGDAVSFGKTVVAGIQEKNVPFMAAGIAYQAFISLLPLLVLIFFVVTILGDEQFASQVAT 64
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
PE + D I + A L I + + + L + + Y
Sbjct: 65 STGEFLPESGQMMVEDAIAESPATAGSTL--IGVVVLVWGALKIFRGLDTAFSEIYEAGG 122
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
S+ + + + L A A + +
Sbjct: 123 TGSFVQQ------------LRDAGLVLGAIGGALIAASAASLLLAFFPDIPFLGLVSPLI 170
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L I + + + P +LPGV+ I W V LF Y+ F+ S
Sbjct: 171 LVVILSIAFLPMFYYFPDVDVTAREVLPGVVVAAIGWTVLQSLFHVYVS-FAGDSEAAGP 229
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
+ +++ L +LY G+ ++GA +NA
Sbjct: 230 VGAVLLLLTWLYFGGLILLVGAVINAV 256
>gi|298373572|ref|ZP_06983561.1| ribonuclease BN [Bacteroidetes oral taxon 274 str. F0058]
gi|298274624|gb|EFI16176.1| ribonuclease BN [Bacteroidetes oral taxon 274 str. F0058]
Length = 449
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 100/268 (37%), Gaps = 5/268 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + I +I+ FV+ + A ++ +S +L++ P + + G + V
Sbjct: 41 KALTFNLLRKIILSIKGFVKSELMARSTSLSFRTVLALVPVLALIIAVGRGFGMSERVNE 100
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
VI+ E+I + + + I + + + + + + N+ +
Sbjct: 101 VIEDSLSGQSELIPYITGFIDNYLEQMSGGVVIGIGVVFLLWTVISTFQEIEANFNKIWN 160
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS++ ++L V + + S + + + V +
Sbjct: 161 VEKSRSFFHQFTTYIALIVLVPVLISLASGFSIYVNNRMNSVLGEL-----YSPLNNLFM 215
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ ++L +P K K + L I ++ + L+ + + S Y+T+
Sbjct: 216 RILPFFFYWLLFTLLYLVVPNTKVKFVHALFAGIICGTAFQLFQYLYINGQINLSRYNTV 275
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELN 269
Y A+I +L + + + GAEL+
Sbjct: 276 YGAFAAIPLFFFWLQISWLIVLYGAELS 303
>gi|269795226|ref|YP_003314681.1| hypothetical protein Sked_19220 [Sanguibacter keddieii DSM 10542]
gi|269097411|gb|ACZ21847.1| predicted membrane protein [Sanguibacter keddieii DSM 10542]
Length = 463
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 52/292 (17%), Positives = 103/292 (35%), Gaps = 21/292 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVV 66
++ +A+ ++ AL+S+ P + G F+G + VV
Sbjct: 120 LVVRCARRISHVRVTGLAAEMTYYALISILPLVTAFGAALGSLERFVGQERVEQIQSTVV 179
Query: 67 FGAW----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ A + + +L G+ + A + +S A +L+ AY V
Sbjct: 180 DQVVRVFDHQIGADVLAPLVEGLLGQERTGVAIGGTVVALWLASRMFRAAIRALDDAYTV 239
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL--AYVRKFFPALGNLLLIIWNG 180
E RS+ ++ L A +TLV++ + V PL + F
Sbjct: 240 EERRSFVQQVMLGLALALGAVLTLVVLLSMLVIGPLLGGGEEIANLFGLGSVFTSAWELL 299
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A +L L ++ + P + LPG + I +V A+ F Y+ +
Sbjct: 300 RWPAVVLLAVGFLALLYRYGPNVSTTWQRCLPGAVGGTIGLLVVALGFQVYLGAAGSSVP 359
Query: 241 -----------MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ +I+ +++L++ + + G LNA + P
Sbjct: 360 GEDAATQTVAIAAQTIGAILAAVLWLWVSSIVILAGGVLNAEVQRMRGTTPP 411
>gi|260433769|ref|ZP_05787740.1| ribonuclease BN [Silicibacter lacuscaerulensis ITI-1157]
gi|260417597|gb|EEX10856.1| ribonuclease BN [Silicibacter lacuscaerulensis ITI-1157]
Length = 288
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 86/271 (31%), Positives = 145/271 (53%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
++ A+ F +++G+ M+SH+++S +L++FPF +F +LAG L +
Sbjct: 7 PVLGRFGRALWLAVRRFDDKNGFVMSSHVAMSLMLALFPFALFTVSLAGLLSQDYVTDEM 66
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I ++FG WP +A+PI E+ VL G T+ A+ A YF+SNGV A+R ++N+AY
Sbjct: 67 IGLIFGVWPNEVAEPIVAELRAVLNGAGSGTITLGAVLAVYFASNGVVAVRAAINQAYHD 126
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ ++ TRL G V+L ++I++ V + +P+ + + L + R
Sbjct: 127 TDSWPFWKTRLFCLGLVILGGAAILIVAAVELLLPIYSRLMSEKTSVNVADWLSVERLRW 186
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + ++ HL LP + + ILPGV+ T W+ G + F+ YI F+ YS Y
Sbjct: 187 TFAVAVPALTVLLAHLVLPVGRHSLRQILPGVLLTLGLWLAGGLAFSLYIGQFARYSATY 246
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
AGLA M L+FLY+ I GAE N +++
Sbjct: 247 AGLAGAMAALIFLYLSAAIMIFGAEFNGALM 277
>gi|311895405|dbj|BAJ27813.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 405
Score = 123 bits (308), Expect = 3e-26, Method: Composition-based stats.
Identities = 50/280 (17%), Positives = 109/280 (38%), Gaps = 14/280 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ ++ ++ D VE +A + LLS+ P ++ A G+L T+
Sbjct: 37 WYGTLWALVKDTTNTCVEYRVTGLAGEAAFFTLLSIPPLLLCLAGTLGYLDDILGAGTID 96
Query: 64 DVVFGAWPEV--------IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ I + + + V L ++ L + + S + +
Sbjct: 97 KLKQDIVSASGTVLSQSSIDEIVQPLLRDVFDSARPDLISLGFLLSLWSGSRALYIFIDT 156
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ Y + R TRL+S G L A V ++ + VA P L +
Sbjct: 157 ITVMYGLDGKRGLVKTRLMSLGLYLGALVIGSLVLPLLVAGPGLL------IGTFQSWAG 210
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+I A ++ L + L ++ + +PG + + VV +V Y+V+
Sbjct: 211 VINALYWPAAIVLLVVFLTSLYHVAVPVSTPWREDIPGALVALLVLVVCSVALRLYLVSS 270
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
++Y LA+ + L++++++ + ++GA +NA++
Sbjct: 271 VEGHSVYGSLAAPVAVLLWIFVVALAVLIGAAMNAAIDRR 310
>gi|225024406|ref|ZP_03713598.1| hypothetical protein EIKCOROL_01281 [Eikenella corrodens ATCC
23834]
gi|224942787|gb|EEG23996.1| hypothetical protein EIKCOROL_01281 [Eikenella corrodens ATCC
23834]
Length = 411
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/267 (14%), Positives = 84/267 (31%), Gaps = 7/267 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
F E + ++S ++ + LL++ P + +
Sbjct: 17 RTLAFARFLYARFYEVNIPQVSSSLTFTTLLALVPLFTVVVVVVSAFPVFADFSAQFHRL 76
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + A L I S V + + N+ +RV R
Sbjct: 77 VSEIMMPAGVAAVSDYIFQFRDHASRLTAIGIAMMIITSLMLVHTIERTFNQIWRVKRPR 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S L+ + + L + + V + + L+ + +
Sbjct: 137 SIVTRVLVYWALLSLGPL-------LVGVGMSLWGVVWRRTLFYLHYPLLASLLQFTVAL 189
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A + L ++ +PA + L +S + F Y+ F++Y +Y A
Sbjct: 190 TATWSMLCLLYKLVPARYVPLRHALISAALAAVSIELLRRGFGLYVANFNSYQLVYGTFA 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
++ L++L + + + GA L AS+
Sbjct: 250 AVPMFLLWLNLNWIVILSGALLAASLS 276
>gi|304391893|ref|ZP_07373835.1| ribonuclease BN [Ahrensia sp. R2A130]
gi|303296122|gb|EFL90480.1| ribonuclease BN [Ahrensia sp. R2A130]
Length = 326
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 89/268 (33%), Positives = 149/268 (55%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V +++I V++ G A+AS+++LS LLS+FPF++ A+L F G + V+D+V
Sbjct: 30 VLRSGWESIVKLVDDGGLAIASNVALSLLLSLFPFLMLVASLVRFYGNPELAEGVVDLVL 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G WP A PIT + +L PA F+ + A +SNGVE R LNRAY+V E RS
Sbjct: 90 GHWPGDAAAPITRTVETLLDQPAGEFFSFGTVIALILASNGVENARDGLNRAYKVKETRS 149
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ RL +V++ +V ++ +F+ VA P+ + F L L++ G+ ++
Sbjct: 150 FLWRRLQGAFFVVVGAVGFILSAFILVATPIVWDFAVSKFDFLEEFGLLVTAGKYSIAIV 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + L H +LP + + SI+ G++ T + ++G+ LF Y+ + Y+ +YAGLA
Sbjct: 210 LLGLILFAFHRYLPDTRYRRRSIIWGILLTIGAILLGSYLFGIYLQNIANYTALYAGLAG 269
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+M +V+LY + V + GAE N ++
Sbjct: 270 MMVAIVYLYCMSVLMLFGAEFNFALAKR 297
>gi|170750736|ref|YP_001756996.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
gi|170657258|gb|ACB26313.1| ribonuclease BN [Methylobacterium radiotolerans JCM 2831]
Length = 295
Score = 123 bits (308), Expect = 4e-26, Method: Composition-based stats.
Identities = 110/266 (41%), Positives = 155/266 (58%), Gaps = 1/266 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A + FV DGWA+ASHI+LS+L S+FPF++ A LAG G ++F AWP I
Sbjct: 4 AAQRFVSHDGWAIASHIALSSLTSLFPFLILLAALAGLFGTQSLADEAGVLIFDAWPREI 63
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
AKPI E+ +VL G+ T+ AL A YFSS+GVE+LR+ LNRAY + E R W++TRL
Sbjct: 64 AKPIVGEVHRVLTEQRSGVLTLGALFALYFSSSGVESLRVGLNRAYGLRESRPWWLTRLE 123
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
S GYV+ + ++ + + V PL V P L L L + GRI T L L + L+
Sbjct: 124 SIGYVICGAFAMLAFALLVVLGPLIWRNVVLVAPGLEPLSLTVAIGRIAVTALLLAVVLV 183
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLASIMTCLV 253
H F+ A + I+S+LPG+ T + W + F +Y+ FS Y++ Y GLA+ M LV
Sbjct: 184 IAHKFVAAGRRSILSVLPGIGVTLVLWFFAGLGFGYYLDRFSNAYASTYGGLATAMVFLV 243
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
FLY L F+ G E+N ++I +
Sbjct: 244 FLYWLAAMFLFGGEINGTVIAARRSR 269
>gi|238785626|ref|ZP_04629604.1| tRNA-processing ribonuclease BN [Yersinia bercovieri ATCC 43970]
gi|238713461|gb|EEQ05495.1| tRNA-processing ribonuclease BN [Yersinia bercovieri ATCC 43970]
Length = 273
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 96/267 (35%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 2 LYSRIDKDGLTMLAGHLAYVSLLSLVPLITVVFALFAAFPMFADISIKLKAFIFSNFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN+ +R RS +
Sbjct: 62 TGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNQIWRSKTPRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + + + + A + +I +L ++
Sbjct: 121 VYWMVLTLGPILVGASMVISSYLLSL------QWLANAQVDSMIDEILRVFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G FT YI F +Y MY LA I +
Sbjct: 175 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFTMYITLFPSYQLMYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y +
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRALRH 261
>gi|261867366|ref|YP_003255288.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261412698|gb|ACX82069.1| tRNA-processing ribonuclease BN (RNase BN) [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 276
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 97/266 (36%), Gaps = 8/266 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F + A +++ S +L++ P I+ ++ V +
Sbjct: 11 FWQRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + + + +K + + ++ + + ++ +LN + R + + I
Sbjct: 71 AGDVVGQYIDEFVNNSKQMSAVGIISLIVVALMLINSIDRTLNGIWHDTSTRPIFTSFAI 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + Y L + L+ +
Sbjct: 131 YWLILTLGPLLVGTSIAASSYVKTMFEYSAASSFGLK--------LLSFVPFLSTWFIFT 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L++
Sbjct: 183 VIYMVVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLLW 242
Query: 255 LYMLGVFFILGAELNASMIIYYWRKK 280
+ + F +LGA+L A + +K+
Sbjct: 243 IQLSWTFVLLGAQLAAVLAEVQSKKQ 268
>gi|298208650|ref|YP_003716829.1| hypothetical protein CA2559_10418 [Croceibacter atlanticus
HTCC2559]
gi|83848573|gb|EAP86442.1| hypothetical protein CA2559_10418 [Croceibacter atlanticus
HTCC2559]
Length = 323
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 50/281 (17%), Positives = 104/281 (37%), Gaps = 9/281 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVI 63
F +I + + D +A ++ I+ L S+ ++ +AG F G +
Sbjct: 5 FKTFLSLIKSTYKRWDNIDPFAKSAIIAYYTLFSLPSLLMIVVTIAGKFFGRDAVQGRIT 64
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRV 122
+ + A+ I I + A + ++ L+ ++N + V
Sbjct: 65 SEIGSLIGDGAAEAIEGMIANAALNDSSAFTVVFGVGALLFGATGAFFQLKRTMNFIWNV 124
Query: 123 VEMRSWYITRLI----SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
E + +I SFG +L+ + L++ + I YV + P + + +
Sbjct: 125 KEKDQTILRMVIDRVISFGMILVVGLMLLVSLVISATIGAISEYVEQIAPNITAIA--LD 182
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G + + + + LP K K L G T + +++G L Y S
Sbjct: 183 IGNFLFSYIFITALFASIFKILPDVKLKWRVTLLGASVTTLLFLIGEYLLGFYFGH-SEP 241
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y G +S++ L+++Y + GA +Y K
Sbjct: 242 ASVYGGASSVVLILLWVYYTCLIVFFGACFTVEYALYKNEK 282
>gi|160935740|ref|ZP_02083115.1| hypothetical protein CLOBOL_00630 [Clostridium bolteae ATCC
BAA-613]
gi|158441484|gb|EDP19194.1| hypothetical protein CLOBOL_00630 [Clostridium bolteae ATCC
BAA-613]
Length = 279
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 3/260 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F E++ A+ +S +LSV PFI+ + + ++++ G P
Sbjct: 9 KRVYDKFAEDEMTVYAAQVSFFIILSVVPFIMLLLTAVQMIPSISNA-RFMELIVGLVPV 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + +++A+ A + + G+ ++ LNR E R + I R
Sbjct: 68 DYKSLAFRVVNDLSLKSPATMISVTAVTALWSAGRGMFSVARGLNRVNGHGEKRWYVINR 127
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI GY ++ + ++ + V + A++ FP + ++ I N R ++ L I
Sbjct: 128 LICSGYTIVFILVCILSLGLLVFGNMIQAFMVSRFPIIADVTTHIINFRALWALMILIIF 187
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS--TYSTMYAGLASIMT 250
+ ++ F+P K+ LPG +F+ + W+ + F+ Y YS MY L +I+
Sbjct: 188 FLGIYTFVPDKSLKLRDQLPGAVFSTVGWMAFSFAFSLYFSHIGGKNYSYMYGSLTAIVL 247
Query: 251 CLVFLYMLGVFFILGAELNA 270
L++LY GAE+N
Sbjct: 248 LLLWLYFCMCILFFGAEINY 267
>gi|210620881|ref|ZP_03292298.1| hypothetical protein CLOHIR_00241 [Clostridium hiranonis DSM 13275]
gi|210155093|gb|EEA86099.1| hypothetical protein CLOHIR_00241 [Clostridium hiranonis DSM 13275]
Length = 284
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 1/270 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M I I + A+ ++ +S+FPF++F + ++ Q +
Sbjct: 1 MERLSMIDRKKINHLFAKLNYSRLSSKAAEVAFFLTMSIFPFLMFTVSTVAYVPVLQ-IT 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+D++ P + I + +S + S V+AL +N A+
Sbjct: 60 KYVDMIEQVVPVKAIGFVDLVIKSAVEKRNTHYMIVSFCLTMWTFSRAVKALIKGMNAAF 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E RS+ +IS + L+ V + + V + + +
Sbjct: 120 YSPETRSFLKVMMISMIFTLMLLVLIFTSMILLVYGEKIGVVIFSYLGFDKVFFNLWNIT 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R +A I ++ + P + PG IF W + + L+++Y FS YS
Sbjct: 180 RYAVGTVATIIVFTLLYKYTPNINLSAKRVAPGAIFATFGWFLMSYLYSYYTNNFSNYSA 239
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y I+ L +LY ++G E+NA
Sbjct: 240 IYGSFREIIVLLTWLYFSSWVIVIGYEINA 269
>gi|295700070|ref|YP_003607963.1| ribonuclease BN [Burkholderia sp. CCGE1002]
gi|295439283|gb|ADG18452.1| ribonuclease BN [Burkholderia sp. CCGE1002]
Length = 423
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 53/269 (19%), Positives = 102/269 (37%), Gaps = 5/269 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A+ F E MA+ I+ A S+ P +V +AG F G + + G +
Sbjct: 25 ALRQFTENRCLEMAASIAFYAAFSLAPTLVMVIAVAGWFFGPAAARGELFGHINGLIGDQ 84
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + + AKG IS A +S +L +LN + R+
Sbjct: 85 AAAGVQTIVENAHHAGAKGGIATIISFSLLAIGASATFSSLNSALNIVWPYTGPRTASWL 144
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + +A++ ++ ++I ++ +L L
Sbjct: 145 ALVRVRLISFGLVLGVAFLLIVSLVLDTVIAFIGEWLWGDSPYVVIGNLLQLGVGLLVLM 204
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ L G + + + G LF Y+ S + S+
Sbjct: 205 FAFAALLKFLPDARVLWRDALVGGVVAAVLFTGGRKLFALYLAHAGMASA-FGAAGSLAV 263
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LY + +LGAE +A+ + +
Sbjct: 264 LLMWLYFSALVLLLGAEFSAARGRLHDPR 292
>gi|311742752|ref|ZP_07716561.1| YihY family protein [Aeromicrobium marinum DSM 15272]
gi|311314380|gb|EFQ84288.1| YihY family protein [Aeromicrobium marinum DSM 15272]
Length = 311
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 57/266 (21%), Positives = 109/266 (40%), Gaps = 9/266 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I+ A + +A+ ++ A LS+FP ++ G G + + + + V
Sbjct: 4 LRSILTTAWKQASSRQASLLAAGVAFYAFLSLFPAMIAGILTYGLVVSPETLTRHTQAVG 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYRVVE 124
A P A IT ++ + L + + A Y +S GV L ++N + E
Sbjct: 64 DALPADAASLITGQMESLADSSGGSLGFGLALAVVLALYSASGGVGNLVTAVNEMFGFPE 123
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS+ +L+S G A + V+ + P L + + L + + GR
Sbjct: 124 TRSFIKRKLLSLGLTAGALLFFVVTITLVAVAPAVLDALID----VPGLRIALEAGRWAM 179
Query: 185 TMLALFIGLIFVHLFLPAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ AL +G+ + P + GV+ W+V ++ F+ Y+ F +Y Y
Sbjct: 180 LLGALVVGVGVLFRLAPDRTDEQATPLVNRGVVVAAALWLVVSLGFSLYVDNFGSYGETY 239
Query: 243 AGLASIMTCLVFLYMLGVFFILGAEL 268
LA ++ L++L+ +LGA +
Sbjct: 240 GALAGVVILLLWLWAGLFAMLLGASI 265
>gi|319404860|emb|CBI78461.1| ribonuclease RNAse bn transmembrane protein [Bartonella rochalimae
ATCC BAA-1498]
Length = 275
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 106/263 (40%), Positives = 163/263 (61%), Gaps = 1/263 (0%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
H+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P I+ + P+ IA+P
Sbjct: 3 HYFRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTPQKIEALVQLLPDAIAEP 62
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
++ EI+ VL L T+S + AAYF+SNGV ALR +LN+AYRV++ RS + R S
Sbjct: 63 LSKEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRTALNKAYRVIDRRSLFFCRFQSLF 122
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+V++ +V LV++SF+ V PL + ++ + + II R ++ LF L+ VH
Sbjct: 123 FVIIGTVGLVVISFLLVLAPLLIKIMQNHSSQITEYIGIIRLWRYIIAIVVLFTSLLIVH 182
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+LPA + K+ ILPG++ T W + ++ F Y+ F Y++ YAGL SIM ++FLY+
Sbjct: 183 KWLPAGQRKVRDILPGILVTIFVWFLTSIAFAQYLTMF-NYASTYAGLTSIMVAIIFLYI 241
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
L FILG E+NA++I Y +
Sbjct: 242 LSAIFILGGEINAAIIFYRDHAQ 264
>gi|315635133|ref|ZP_07890411.1| tRNA-processing ribonuclease BN [Aggregatibacter segnis ATCC 33393]
gi|315476095|gb|EFU66849.1| tRNA-processing ribonuclease BN [Aggregatibacter segnis ATCC 33393]
Length = 278
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 96/265 (36%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F + A +++ S +L++ P I+ ++ V +
Sbjct: 11 FWQRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + + + +K + + ++ + + ++ +LN + R + + I
Sbjct: 71 ASDMVGQYIDEFVNNSKKMSAVGIISLIVVALMLINSIDRTLNSIWHDTGTRPIFTSFAI 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + F +L + L+ +
Sbjct: 131 YWLILTLGPLLVGASIAASTYVKTMFESASNFSFSLK--------LLSFVPFLSTWFIFT 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L++
Sbjct: 183 LIYMVVPNQKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLLW 242
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
+ + +LGA+L A + +K
Sbjct: 243 IQLSWTVVLLGAQLAAVLAELRSKK 267
>gi|229545287|ref|ZP_04434012.1| ribonuclease BN [Enterococcus faecalis TX1322]
gi|293382826|ref|ZP_06628747.1| YihY family protein [Enterococcus faecalis R712]
gi|293387965|ref|ZP_06632498.1| YihY family protein [Enterococcus faecalis S613]
gi|312901455|ref|ZP_07760730.1| YihY family protein [Enterococcus faecalis TX0470]
gi|312905909|ref|ZP_07764923.1| YihY family protein [Enterococcus faecalis DAPTO 512]
gi|312908943|ref|ZP_07767806.1| YihY family protein [Enterococcus faecalis DAPTO 516]
gi|229309637|gb|EEN75624.1| ribonuclease BN [Enterococcus faecalis TX1322]
gi|291079817|gb|EFE17181.1| YihY family protein [Enterococcus faecalis R712]
gi|291082621|gb|EFE19584.1| YihY family protein [Enterococcus faecalis S613]
gi|310628076|gb|EFQ11359.1| YihY family protein [Enterococcus faecalis DAPTO 512]
gi|311290727|gb|EFQ69283.1| YihY family protein [Enterococcus faecalis DAPTO 516]
gi|311291444|gb|EFQ70000.1| YihY family protein [Enterococcus faecalis TX0470]
gi|315161842|gb|EFU05859.1| YihY family protein [Enterococcus faecalis TX0645]
gi|315173054|gb|EFU17071.1| YihY family protein [Enterococcus faecalis TX1346]
Length = 303
Score = 122 bits (307), Expect = 4e-26, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 15 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + +++
Sbjct: 73 IPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V + + + ++ F +++ + T + L
Sbjct: 133 LVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTVVL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 193 LVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 253 ILMLWLNFAATIIILGAIVNAVVDEYLSGDK 283
>gi|149372594|ref|ZP_01891706.1| ribonuclease BN, putative [unidentified eubacterium SCB49]
gi|149354637|gb|EDM43201.1| ribonuclease BN, putative [unidentified eubacterium SCB49]
Length = 313
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 118/273 (43%), Gaps = 1/273 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ ++ ++ AS I+ S +++FPF++F NL ++ F + +
Sbjct: 35 LYRLVDIYGTGIIKGSFSPRASSIAYSFFVALFPFLLFILNLLPYIKIEGFQTRFLIFIE 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A P A I + P GL + + + + ++NGV A + +Y V R
Sbjct: 95 EALPAQTADLFYPVIADIAVNPRGGLLSFVIILSLFLAANGVNAAFSAFEESYYVTLNRG 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ +F LL ++ L+I V V + + + I ++ ++
Sbjct: 155 FFKQYAYAFAVSLLLALLLIITVGVIVYGEFLINDLAGRAYIENDFF-WISLLQVSVFVV 213
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+++ + ++ F KI G + T + ++V LF YI FS Y+ +Y L +
Sbjct: 214 MVYVAVATLYYFGTRESRKIRFFSLGALITTLLFIVTTYLFGIYINNFSNYNELYGSLGA 273
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ ++++++ +LG ELN ++ ++K
Sbjct: 274 LLIMMLYIWINANLLLLGFELNITLFKLDVKRK 306
>gi|56696732|ref|YP_167093.1| ribonuclease BN, putative [Ruegeria pomeroyi DSS-3]
gi|56678469|gb|AAV95135.1| ribonuclease BN, putative [Ruegeria pomeroyi DSS-3]
Length = 284
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 87/265 (32%), Positives = 140/265 (52%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ A+ F + G+ M+SH+++S ++++FPFI+F LAG L +I ++FG
Sbjct: 13 LRAAWLALMRFQAKSGFVMSSHVAMSMMMALFPFILFTVALAGSLSQDLVTDDLIQLIFG 72
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
WPE +A PI E+ VLA + T+ + A YF+SNGV+A+R +++RAY E R +
Sbjct: 73 TWPEQVATPIVAELKAVLAGANSRVMTVGGVLAVYFASNGVDAVREAMSRAYHDAETRPF 132
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ TRL+ V+ ++ ++ V +P+ V P L + +
Sbjct: 133 WKTRLLCIAIVVGGGAIVLAVAAFEVVMPIYTRLVTDALPGAAPDWLSVERLSWIFVVAM 192
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
++ H LPA + + ILPGV+ T + W F+ YI F++YST YAGLA
Sbjct: 193 PAGAVLACHALLPAGRHPLRRILPGVVLTLVLWAGCGWGFSLYIANFASYSTTYAGLAGA 252
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
M L+FLY+ ILGAE N +++
Sbjct: 253 MAALIFLYLNAAILILGAEFNGALM 277
>gi|282862619|ref|ZP_06271680.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282562305|gb|EFB67846.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 317
Score = 122 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 94/275 (34%), Gaps = 4/275 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG++ + ++L +L+V P ++ L+ + +
Sbjct: 33 WPLLRDSFVRFRYADGFSHSRALALQTVLAVVPLVIAFVGLSSAMHTEDLGRVAELTIHR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSN---GVEALRISLNRAYRVVEM 125
A+ + D + + G + +N + + NR Y V
Sbjct: 93 ITEGPSAEVVDDALERSRRHADDGAKVALWFGLVFSLTNTTTAMCQIERGANRIYGVERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ L + A + L I VA +A V + R A
Sbjct: 153 RDFHRKYLRGLVMSVTAGIPLGIGFVAMVAGGDLVAAVVDVYGLGARAESAWDLLRWPAG 212
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + + P + + G + W L + Y+ ++ T+Y
Sbjct: 213 VLLVLLSASAIFRRSPRRRQPGYTWLAFGAAVYLVLWTTLTWLLSLYLEVSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L + M+ L++ Y+ + LG A + R+
Sbjct: 273 LTAFMSLLLWAYLTSIALFLGLSFAAQLEAVRARR 307
>gi|254513820|ref|ZP_05125881.1| tRNA-processing ribonuclease BN [gamma proteobacterium NOR5-3]
gi|219676063|gb|EED32428.1| tRNA-processing ribonuclease BN [gamma proteobacterium NOR5-3]
Length = 406
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 37/277 (13%), Positives = 103/277 (37%), Gaps = 8/277 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
++ + + A+ ++ +L ++ P + +A + A Q + ++
Sbjct: 8 LQKLWRRALYLAARYKSDRCRDTAAALTYMSLFALVPLLTVLYTMASAVPAFQGLESSIQ 67
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++F + I + + + AK L + + + + N +R
Sbjct: 68 GLLFENLLPETSAGIEEYVSDF-SRQAKNLTGFGIAFLMATAVLMLRNIEQAFNLIWRTR 126
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + L+ + + LA +T+ + V + + ++ +++ +
Sbjct: 127 GNRGTVSSFLLYWAILSLAPITIGLGLGVSTFLASFAGQLEQW-----DIIGVGALLLRM 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L +G V+ +P + + L G + S+ + LFT + S+ + +Y
Sbjct: 182 LPYLLQIVGFTLVYAAVPNCRVPLKHALVGGVIAASSFNIARALFTKLVAG-SSITFIYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A++ L+++Y+ + ++ A + S+ Y +
Sbjct: 241 AFAAVPLFLLWIYISWIIVLVSAIVVHSLSAYQSEAQ 277
>gi|197104295|ref|YP_002129672.1| ribonuclease RNase BN (RBN) transmembrane protein [Phenylobacterium
zucineum HLK1]
gi|196477715|gb|ACG77243.1| ribonuclease RNase BN (RBN) transmembrane protein [Phenylobacterium
zucineum HLK1]
Length = 315
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 45/256 (17%), Positives = 109/256 (42%), Gaps = 11/256 (4%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+A I+ LL++FP + ++ G + V + + +P + + + ++++
Sbjct: 1 MIFVAGSITFFTLLAIFPALGAFVSIYGLIADVAAVNDQLAQLSLVFPAEVVRIVGEQMM 60
Query: 84 QVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
++ + L +S L + + ++ G++AL LN AY E R+++ +++ + L
Sbjct: 61 RLATERSANLSVAFLVSLLLSIWTANAGMKALFDGLNIAYGETETRNFFYRTALTYAFTL 120
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + ++S + VA P+AL + + R A + F
Sbjct: 121 AFLLFITLVSAILVAAPIALKTFGLRSGWMFGV-------RWLALFFVAAAAFSVAYRFG 173
Query: 201 PAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P + + + G + + W+ G+ F+ Y+ + Y L + + +++++
Sbjct: 174 PCRRRARWRWVTWGAVVAAVLWMAGSAGFSWYVNNIAHLQVTYGSLGAAIGFMLWVWFSV 233
Query: 260 VFFILGAELNASMIIY 275
+ + GAELNA +
Sbjct: 234 LVVLTGAELNAEIEHQ 249
>gi|256961436|ref|ZP_05565607.1| ribonuclease BN [Enterococcus faecalis Merz96]
gi|257084723|ref|ZP_05579084.1| ribonuclease BN [Enterococcus faecalis Fly1]
gi|256951932|gb|EEU68564.1| ribonuclease BN [Enterococcus faecalis Merz96]
gi|256992753|gb|EEU80055.1| ribonuclease BN [Enterococcus faecalis Fly1]
Length = 304
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 16 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 73
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + +++
Sbjct: 74 IPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKNFI 133
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V + + + ++ F +++ + T + L
Sbjct: 134 LVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTVVL 193
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 194 LVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 253
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 254 ILMLWLNFAATIIILGAIVNAVVDEYLSGDK 284
>gi|299132223|ref|ZP_07025418.1| ribonuclease BN [Afipia sp. 1NLS2]
gi|298592360|gb|EFI52560.1| ribonuclease BN [Afipia sp. 1NLS2]
Length = 294
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 106/277 (38%), Positives = 155/277 (55%), Gaps = 2/277 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ F I DA F+ +DGWA+ASHI+LSAL++ FPF++ A+LAGFLG+
Sbjct: 3 FIRRAFQIGIDAFNAFLADDGWAIASHIALSALMAFFPFLIVLASLAGFLGSKDLADQAA 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ WP A + +I VL T+ + + YFSSNGVE+LR+ LNRAY V
Sbjct: 63 GLMLQVWPSQAADALVTQIHDVLTQTRGDALTLGLVLSVYFSSNGVESLRVGLNRAYGVT 122
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRI 182
E R WY RL S GY L+A++ ++++ + V PL LA R + P + ++ R
Sbjct: 123 ETRPWYWLRLESIGYTLIAALISLVLALLLVLGPLLLATARYYLPLIIEPKAHLLNFSRY 182
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTM 241
+++L L +H +LPA + I+PG+ FT I+ +V A F Y+ F+ Y T
Sbjct: 183 AIALVSLVSALFVLHAWLPAGHRTLRQIMPGIAFTVIASLVSAAGFGQYLARFANNYVTT 242
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YAGLAS++ LVFLY + FI G LNA++I
Sbjct: 243 YAGLASVVIALVFLYFIAAIFIFGGALNAAIIRRKQP 279
>gi|196230042|ref|ZP_03128905.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
gi|196225639|gb|EDY20146.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
Length = 405
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 96/275 (34%), Gaps = 4/275 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
+ + + + + +++ ++ ++ SV P +V +AG F G + D +
Sbjct: 1 MLTLFKRTASAWSDANALRLSAALAYYSIFSVAPLLVLAVGVAGWFFGTKAMTGQLQDDL 60
Query: 67 FGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A I + + +I + +S L+ +LN + V
Sbjct: 61 RELMGGRAADFIQSMVQSASQPSTSFWATSIGLVTLLIGASGVFGQLKDALNSIWSVKVK 120
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYA 184
+ + V + + V + L ++ A+ L IW G +
Sbjct: 121 SGGWKVYVRQELLSFGMVVVIGFLLLVSFILTTLLNAFSRWVEAILRLPSWIWGGAGVLL 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+++ + + + LP K + G FT + + G +Y+ ST S+ +
Sbjct: 181 SLVVVTLLFALIFKVLPDVKIHWRDVWAGAAFTAVLFEAGKFGLAYYLGRASTTSS-FGA 239
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ L+++Y + GAE + K
Sbjct: 240 SGSVVLILLWVYYASCIVLFGAEFTKEYALARGEK 274
>gi|315033446|gb|EFT45378.1| YihY family protein [Enterococcus faecalis TX0017]
Length = 302
Score = 122 bits (306), Expect = 6e-26, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 15 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + +++
Sbjct: 73 IPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V + + + ++ F +++ + T + L
Sbjct: 133 LVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTVVL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 193 LVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 253 ILMLWLNFAATIIILGAIVNAVVDEYLSGDK 283
>gi|29376707|ref|NP_815861.1| ribonuclease BN, putative [Enterococcus faecalis V583]
gi|227520254|ref|ZP_03950303.1| ribonuclease BN [Enterococcus faecalis TX0104]
gi|227555312|ref|ZP_03985359.1| ribonuclease BN [Enterococcus faecalis HH22]
gi|229549522|ref|ZP_04438247.1| ribonuclease BN [Enterococcus faecalis ATCC 29200]
gi|294779051|ref|ZP_06744464.1| YihY family protein [Enterococcus faecalis PC1.1]
gi|300861102|ref|ZP_07107189.1| YihY family protein [Enterococcus faecalis TUSoD Ef11]
gi|307270373|ref|ZP_07551678.1| YihY family protein [Enterococcus faecalis TX4248]
gi|307272381|ref|ZP_07553637.1| YihY family protein [Enterococcus faecalis TX0855]
gi|307277271|ref|ZP_07558375.1| YihY family protein [Enterococcus faecalis TX2134]
gi|307281885|ref|ZP_07562100.1| YihY family protein [Enterococcus faecalis TX0860]
gi|307292424|ref|ZP_07572280.1| YihY family protein [Enterococcus faecalis TX0411]
gi|312903787|ref|ZP_07762960.1| YihY family protein [Enterococcus faecalis TX0635]
gi|312953341|ref|ZP_07772183.1| YihY family protein [Enterococcus faecalis TX0102]
gi|29344171|gb|AAO81931.1| ribonuclease BN, putative [Enterococcus faecalis V583]
gi|227072333|gb|EEI10296.1| ribonuclease BN [Enterococcus faecalis TX0104]
gi|227175523|gb|EEI56495.1| ribonuclease BN [Enterococcus faecalis HH22]
gi|229305340|gb|EEN71336.1| ribonuclease BN [Enterococcus faecalis ATCC 29200]
gi|294453881|gb|EFG22270.1| YihY family protein [Enterococcus faecalis PC1.1]
gi|295113362|emb|CBL31999.1| Predicted membrane protein [Enterococcus sp. 7L76]
gi|300850141|gb|EFK77891.1| YihY family protein [Enterococcus faecalis TUSoD Ef11]
gi|306496553|gb|EFM66114.1| YihY family protein [Enterococcus faecalis TX0411]
gi|306503839|gb|EFM73061.1| YihY family protein [Enterococcus faecalis TX0860]
gi|306506201|gb|EFM75367.1| YihY family protein [Enterococcus faecalis TX2134]
gi|306510935|gb|EFM79949.1| YihY family protein [Enterococcus faecalis TX0855]
gi|306513281|gb|EFM81908.1| YihY family protein [Enterococcus faecalis TX4248]
gi|310628729|gb|EFQ12012.1| YihY family protein [Enterococcus faecalis TX0102]
gi|310632861|gb|EFQ16144.1| YihY family protein [Enterococcus faecalis TX0635]
gi|315025881|gb|EFT37813.1| YihY family protein [Enterococcus faecalis TX2137]
gi|315028196|gb|EFT40128.1| YihY family protein [Enterococcus faecalis TX4000]
gi|315035714|gb|EFT47646.1| YihY family protein [Enterococcus faecalis TX0027]
gi|315146132|gb|EFT90148.1| YihY family protein [Enterococcus faecalis TX2141]
gi|315146331|gb|EFT90347.1| YihY family protein [Enterococcus faecalis TX4244]
gi|315154461|gb|EFT98477.1| YihY family protein [Enterococcus faecalis TX0031]
gi|315157121|gb|EFU01138.1| YihY family protein [Enterococcus faecalis TX0043]
gi|315160169|gb|EFU04186.1| YihY family protein [Enterococcus faecalis TX0312]
gi|315164314|gb|EFU08331.1| YihY family protein [Enterococcus faecalis TX1302]
gi|315166495|gb|EFU10512.1| YihY family protein [Enterococcus faecalis TX1341]
gi|315171501|gb|EFU15518.1| YihY family protein [Enterococcus faecalis TX1342]
gi|315575186|gb|EFU87377.1| YihY family protein [Enterococcus faecalis TX0309B]
gi|315578172|gb|EFU90363.1| YihY family protein [Enterococcus faecalis TX0630]
gi|315582613|gb|EFU94804.1| YihY family protein [Enterococcus faecalis TX0309A]
gi|323481264|gb|ADX80703.1| ribonuclease BN [Enterococcus faecalis 62]
gi|327535592|gb|AEA94426.1| YihY family protein [Enterococcus faecalis OG1RF]
Length = 302
Score = 122 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 15 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + +++
Sbjct: 73 IPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V + + + ++ F +++ + T + L
Sbjct: 133 LVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTVVL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 193 LVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 253 ILMLWLNFAATIIILGAIVNAVVDEYLSGDK 283
>gi|332880145|ref|ZP_08447827.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681904|gb|EGJ54819.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 437
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 92/275 (33%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y + E ++ + + AS ++ S +L+ P + + LG +
Sbjct: 28 KKYAFNALRKLVLTAECYLSKHLNSHASALTYSTILATVPILAIIFAIGRGLGYGSIIEE 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I + + + + L Y + I+LN +
Sbjct: 88 KIKSNLSVNQQFADMVLNFINSYLEHTQSGIFIGFGLLLLLYTVVQLTANIEIALNSIWN 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS Y LL + ++I S + + + + +P L +
Sbjct: 148 VKNQRSIYRQITDYISVFLLLPILIIISSGLSIFLATI----AQDYPNFMVLSTTVKILI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++++P + + + ++ + H + S+Y+ +
Sbjct: 204 KLSPYALSGLLFTALYMYMPNTDIRFRNAILPGFIAGTAFQFLQYFYIHSQIWVSSYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ ++++ + + GA+L+ +
Sbjct: 264 YGSFAALPMFMLWVNFSWIICLFGAQLSYANQNLR 298
>gi|239626306|ref|ZP_04669337.1| ribonuclease BN [Clostridiales bacterium 1_7_47_FAA]
gi|239516452|gb|EEQ56318.1| ribonuclease BN [Clostridiales bacterium 1_7_47FAA]
Length = 278
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 57/270 (21%), Positives = 122/270 (45%), Gaps = 3/270 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + + E++ A+ +S +LSV PFI+ + + ++++ G P
Sbjct: 10 VKQVYDKYAEDEMTVYAAQVSFFIILSVVPFIMLLLTAVQMIPSISNAQ-FMELIVGLVP 68
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + +++A+ A + + G+ ++ LNR + E R + +
Sbjct: 69 VDYKSLAFRVVNDLSLKSPATMISVTAITALWSAGRGMFSVARGLNRVHGHGEKRWYVVG 128
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RLI GY ++ + ++ + V + A++ FP + +++ I N R ++ L +
Sbjct: 129 RLICSGYTIVFILVCILSLGLLVFGNMIQAFMVNRFPIVADVVTHIINFRALWALMILIM 188
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS--TYSTMYAGLASIM 249
+ ++ F+P K K+ +PG +F+ + W+ + F+ Y YS MY L +I+
Sbjct: 189 FFLGIYTFVPDKKLKLQDQIPGAVFSTVGWMAFSFAFSLYFNHIGGRNYSYMYGSLTAIV 248
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++LYM GAE+N + R+
Sbjct: 249 LLLLWLYMCMCILFFGAEINYYWKELFGRE 278
>gi|255972225|ref|ZP_05422811.1| ribonuclease BN [Enterococcus faecalis T1]
gi|255975337|ref|ZP_05425923.1| ribonuclease BN [Enterococcus faecalis T2]
gi|256617227|ref|ZP_05474073.1| ribonuclease BN [Enterococcus faecalis ATCC 4200]
gi|256763001|ref|ZP_05503581.1| ribonuclease BN [Enterococcus faecalis T3]
gi|256853649|ref|ZP_05559014.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256956586|ref|ZP_05560757.1| ribonuclease BN [Enterococcus faecalis DS5]
gi|256963474|ref|ZP_05567645.1| ribonuclease BN [Enterococcus faecalis HIP11704]
gi|257079512|ref|ZP_05573873.1| ribonuclease BN [Enterococcus faecalis JH1]
gi|257082108|ref|ZP_05576469.1| ribonuclease BN [Enterococcus faecalis E1Sol]
gi|257087331|ref|ZP_05581692.1| ribonuclease BN [Enterococcus faecalis D6]
gi|257090465|ref|ZP_05584826.1| ribonuclease BN [Enterococcus faecalis CH188]
gi|257416512|ref|ZP_05593506.1| ribonuclease BN [Enterococcus faecalis AR01/DG]
gi|257419753|ref|ZP_05596747.1| ribonuclease BN [Enterococcus faecalis T11]
gi|257422087|ref|ZP_05599077.1| ribonuclease BN [Enterococcus faecalis X98]
gi|255963243|gb|EET95719.1| ribonuclease BN [Enterococcus faecalis T1]
gi|255968209|gb|EET98831.1| ribonuclease BN [Enterococcus faecalis T2]
gi|256596754|gb|EEU15930.1| ribonuclease BN [Enterococcus faecalis ATCC 4200]
gi|256684252|gb|EEU23947.1| ribonuclease BN [Enterococcus faecalis T3]
gi|256710592|gb|EEU25635.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256947082|gb|EEU63714.1| ribonuclease BN [Enterococcus faecalis DS5]
gi|256953970|gb|EEU70602.1| ribonuclease BN [Enterococcus faecalis HIP11704]
gi|256987542|gb|EEU74844.1| ribonuclease BN [Enterococcus faecalis JH1]
gi|256990138|gb|EEU77440.1| ribonuclease BN [Enterococcus faecalis E1Sol]
gi|256995361|gb|EEU82663.1| ribonuclease BN [Enterococcus faecalis D6]
gi|256999277|gb|EEU85797.1| ribonuclease BN [Enterococcus faecalis CH188]
gi|257158340|gb|EEU88300.1| ribonuclease BN [Enterococcus faecalis ARO1/DG]
gi|257161581|gb|EEU91541.1| ribonuclease BN [Enterococcus faecalis T11]
gi|257163911|gb|EEU93871.1| ribonuclease BN [Enterococcus faecalis X98]
Length = 303
Score = 122 bits (305), Expect = 7e-26, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 16 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 73
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + +++
Sbjct: 74 IPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKNFI 133
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V + + + ++ F +++ + T + L
Sbjct: 134 LVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTVVL 193
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 194 LVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 253
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 254 ILMLWLNFAATIIILGAIVNAVVDEYLSGDK 284
>gi|256820860|ref|YP_003142139.1| ribonuclease BN [Capnocytophaga ochracea DSM 7271]
gi|256582443|gb|ACU93578.1| ribonuclease BN [Capnocytophaga ochracea DSM 7271]
Length = 303
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 108/271 (39%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ + AS IS S L++FPF++F NL ++ F +
Sbjct: 32 LYDLLELYTAGIIRGALTYRASAISYSFFLAIFPFLLFILNLIPYIPIENFQGDFWAFIE 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +D + GL + + + +NG+ A+ +Y R+
Sbjct: 92 DMLPPGTHDFFSDIFFDIADKKRGGLLSSVFFLSIFLMTNGIMAIFGGFEYSYHRQITRT 151
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L + ++ ++ ++ VF+ + L + + ++ +I L
Sbjct: 152 YIKQYLYALMVAIILALLVLFAVIVFIYYEVYLVPYLDKINFITDYETLLKISKIVFVAL 211
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ G + F + G +FT + + V LF YI FS Y+ +Y + +
Sbjct: 212 ITYFGTGLLFYFGTVEGRESKFFSAGSLFTVLLFGVTTYLFGIYIENFSRYNQLYGSIGA 271
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ L+++++ +LG ELNAS++
Sbjct: 272 LLIFLLYIWLNANILLLGFELNASLLKLKKH 302
>gi|126661844|ref|ZP_01732843.1| hypothetical protein FBBAL38_00795 [Flavobacteria bacterium BAL38]
gi|126625223|gb|EAZ95912.1| hypothetical protein FBBAL38_00795 [Flavobacteria bacterium BAL38]
Length = 307
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 114/271 (42%), Gaps = 2/271 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++DI+ + AS I+ S +++FPF +F NL F+ F + V
Sbjct: 35 LYDILEMYVLGIFRGAFSYRASAIAFSFFMALFPFALFILNLIPFIPLENFQADFLKFVE 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + I + ++ +GL + + + +NG+ A+ + + R
Sbjct: 95 NGVPPNTYEAIEMILKDIMGTSHQGLLSSGFILSILLMTNGINAILGGFEMSAHITITRG 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ IS L+ S+ L+I V + + + + +I R +L
Sbjct: 155 FFKQYFISLAISLVLSLILIITVAAIVITEVMIQKI--NVHGYVADVSVIEWSRYGFIIL 212
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ I ++ F SKI I G + T I ++ + +F Y+ F+ Y+ +Y + +
Sbjct: 213 MILITTSILYKFGAKETSKISFISYGAVLTTILIILSSYIFGVYVEKFARYNELYGSIGT 272
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ + ++++ + +LG ELNA++ +
Sbjct: 273 LLVLMFYIWINCMVLLLGFELNATISKLKRK 303
>gi|297569696|ref|YP_003691040.1| ribonuclease BN [Desulfurivibrio alkaliphilus AHT2]
gi|296925611|gb|ADH86421.1| ribonuclease BN [Desulfurivibrio alkaliphilus AHT2]
Length = 474
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 94/296 (31%), Gaps = 35/296 (11%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA- 75
F + AS ++ + +LS+ P + G + LGA + A
Sbjct: 46 REFNRDRIPLRASALTFTIMLSLVPTLALGTAVLKGLGADDQMRQAAHRFIDQMEASTAI 105
Query: 76 --------------------------------KPITDEILQVLAVPAKGLFTISALAAAY 103
+ + V L +
Sbjct: 106 WGESGEMVPNGNDHSAPPATAEQLPGTTDHLREAVDQIFAYVDRTDFTTLGAFGVVGLVA 165
Query: 104 FSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
+ ++ S+N ++ R + +++ + + + L +
Sbjct: 166 AVIIVLGSIERSMNAIWQAGGGRPMGRRMMDYLALMIMLPL--AVNLTLATEATLQSEAL 223
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
++ + L+ +L L + ++ FLPA + L G +F + W+V
Sbjct: 224 QERLQFFLPMGLLESILLDLLPLLLLTLTFTLLYRFLPATRVNFTPALIGGLFGAVLWLV 283
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+ + + Y+ +Y A++ LV+L + + F+ GAE++ + + +
Sbjct: 284 VQGLYLKMQIGVARYNAIYGSFATLPLFLVWLQLCWIIFLAGAEMSFATQVRRNYR 339
>gi|302342272|ref|YP_003806801.1| ribonuclease BN [Desulfarculus baarsii DSM 2075]
gi|301638885|gb|ADK84207.1| ribonuclease BN [Desulfarculus baarsii DSM 2075]
Length = 451
Score = 122 bits (305), Expect = 8e-26, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 99/263 (37%), Gaps = 5/263 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ Y ++ +F AS ++ LL + P + +LA LG F + +F
Sbjct: 37 LQVAYLSVRNFFGRRLAFQASALTFITLLGLVPALAISFSLAKGLG---FADAMRAALFN 93
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + V L + A + + NR + V E RS
Sbjct: 94 EFTASQHQVMEYILQYVERTNMGALGVMGLAALIVSLVLALSNAEDAFNRIWEVKETRSL 153
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +++ + +V + + +A ++ + + G +L
Sbjct: 154 FRKFTDYLSVLIICPLLIVAGTG--IWAGMAAHGFVQWLMGQALIGEVAAMGLQLGPVLM 211
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + +F+++FLP + +S + + T W + + + + Y+ +Y G A++
Sbjct: 212 LAVAFVFMYMFLPNTRVPFVSAVIAGVVTAGLWWGVQHAYLQFQIGVARYNAIYGGFATL 271
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
LV+L + + GAEL +
Sbjct: 272 PLFLVWLQVSWTVVLYGAELAHA 294
>gi|297156417|gb|ADI06129.1| putative integral membrane protein [Streptomyces bingchenggensis
BCW-1]
Length = 439
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 102/274 (37%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G+ TV +
Sbjct: 3 WLLLKDTVNSCMEYRVTGLAAEAAFFTLLSLPPLLLALIGLLGYFDVWTNTDTVATIRQN 62
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + V+ + ++ A + S V ++ Y
Sbjct: 63 ILNASGTVLSDKGVREIARPLLDDVIKGGRPDVISLGFAIALWSGSRAVNVFVDTITIMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL+SF L+A + + + V P A+ ++ ++
Sbjct: 123 GLEGRRGIVRTRLLSFLLYLVALIIGAVALPLMVIGPEAVVHLVPASGD------LVRVL 176
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S +PG + WV+G+VL Y+V T
Sbjct: 177 YWPVVILLSVAFLTTLYHVSVPVRSPWREDIPGALVALAIWVLGSVLLRIYLVHTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 270
>gi|294787836|ref|ZP_06753080.1| YihY family protein [Simonsiella muelleri ATCC 29453]
gi|294484129|gb|EFG31812.1| YihY family protein [Simonsiella muelleri ATCC 29453]
Length = 405
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 17/268 (6%)
Query: 11 IIYDAIEHFVEE-DGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFG 68
+ F EE +AS ++ ++LL++ P + ID +
Sbjct: 15 FAKFLWKRFDEEIHVLQVASSLTYTSLLTLVPLLTVILVALAMFPMFGNVSEQFIDFINQ 74
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A I + ++ L +S S + V+ + + NR +RV E R
Sbjct: 75 NIVPSGASAIAQYLNDFRNAASQ-LTAMSIFMMLLTSLSLVQTIDQTFNRIFRVQETRPM 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I I + ++ + + + + + + L I + + +L
Sbjct: 134 WIQYPIYWLVLMGVPMLVGVSMLLMSEVNMLLH--------------IPSVWKWTSQLLW 179
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L ++ +P L G IFT I + F Y+ F++Y+ +Y A+I
Sbjct: 180 DIALLYILYRMMPNRHVPYEHALIGAIFTAILFESCKWGFGIYVKNFNSYTLIYGAFAAI 239
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYY 276
LV+L +L V + GA L AS+ +
Sbjct: 240 PVFLVWLQLLWVILLTGAVLTASLAYFR 267
>gi|319780803|ref|YP_004140279.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317166691|gb|ADV10229.1| ribonuclease BN [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 333
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 104/282 (36%), Gaps = 4/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
MR F + ++ +++ F++++ + + ++ A S+ P ++ +AG G
Sbjct: 1 MRPSFADSWHLVRESVVGFIDDNALSHGAAMAFYAATSLAPILLIVVAIAGLVFGHDAAQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + G A + + I + +S ++ SLN
Sbjct: 61 LALSAQISGLMGPESADLLKTALESASGRLYGTWAAIIGLVTLLVAASGVFGEMQQSLNT 120
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+++ + + + L L + V + A++ + F A II
Sbjct: 121 IWKIEPQGNSLSRLVRARAASLGLVAALGFLLLVSLIASAAISALGAFINAHLPFGTIIL 180
Query: 179 NGRI-YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+G + + + ++ LP + + G + T + +G L YI T +
Sbjct: 181 SGINGVVSFALIAVMFAAIYKVLPDRTLEWRDVAIGAVGTAALFTLGKSLIGWYIGTSAI 240
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S+ Y ++ L+++Y F+LGAE + + + +
Sbjct: 241 ASS-YGAAGGLLVILLWVYYSSEIFLLGAEFTRAYSVRHGSR 281
>gi|194334278|ref|YP_002016138.1| ribonuclease BN [Prosthecochloris aestuarii DSM 271]
gi|288559221|sp|B4S8V4|Y1471_PROA2 RecName: Full=UPF0761 membrane protein Paes_1471
gi|194312096|gb|ACF46491.1| ribonuclease BN [Prosthecochloris aestuarii DSM 271]
Length = 422
Score = 121 bits (304), Expect = 9e-26, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 101/276 (36%), Gaps = 9/276 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVI 63
V + + F + A ++ LLS+ P + ++ F V
Sbjct: 16 LRSVRSFLAFFSKSFNRDQVLLSAGSLAFQTLLSIVPLMAVILSVLSVSPVFDSFKQYVE 75
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ +F + + + + Q ++ + + TI L+ + + + +LNR + V
Sbjct: 76 EFIFQNFLPASGVEVQEYLWQFISKTS-SVPTIGGLSLFIIALFLISTIDHTLNRIWGVD 134
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R ++ + + + L + + +YV F G L + +
Sbjct: 135 APRKFFQGFTLYWTVLTLGPIFIGSSLVAT-------SYVWYNFFTQGALADVQAKTLLL 187
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ F+ +++ +P K K + G I + + F Y+ +T+ +Y
Sbjct: 188 LPVMNTFLAFFLLYILVPNRKVKFVHAFSGAILATLLFEFSKRWFAFYVSHVATFEHIYG 247
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+ I ++Y++ V + GAE + + + +
Sbjct: 248 ALSVIPLLFFWIYLIWVVALSGAEFVYCLGVVHPER 283
>gi|254485604|ref|ZP_05098809.1| ribonuclease BN [Roseobacter sp. GAI101]
gi|214042473|gb|EEB83111.1| ribonuclease BN [Roseobacter sp. GAI101]
Length = 303
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 115/271 (42%), Gaps = 9/271 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + I +++ +A+ ++ A+LS+FP + + + V ++ + G
Sbjct: 8 WVSLRACIADIGQKNVALIAAGVAFYAMLSLFPALAALVAILSLVSDPVVVIAQLEDMRG 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTIS---ALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + I +++ ++ ++ L L A + + GV A+ I LN Y
Sbjct: 68 LMPNDVYDIINGQVVSMVTTSSETLGWAGTVSLLVALWSARAGVGAMMIGLNSVYNE-RN 126
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ L + + +I V P+ L++V P ++ R
Sbjct: 127 RNAAFHYLRALLLTFGLVMVGIIALITVVIAPIVLSFV----PLGIFGSIVAEVTRWTIA 182
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L GL ++ + P + ++ + G +F +W V ++ F++Y+ F Y+ +Y
Sbjct: 183 ISVLLAGLGVLYRYGPNRRPARVGWLTFGAVFAVAAWAVVSIGFSYYVANFGNYNQVYGS 242
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++ LV+L++ ++GA NA + +
Sbjct: 243 IGAVIAMLVWLWISSFLVLMGASWNAQVELR 273
>gi|120435843|ref|YP_861529.1| ribonuclease BN-like family protein [Gramella forsetii KT0803]
gi|117577993|emb|CAL66462.1| ribonuclease BN-like family protein [Gramella forsetii KT0803]
Length = 336
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 101/283 (35%), Gaps = 5/283 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
M I ++ + + + + +A ++ I+ AL S+ ++ ++AG+ G
Sbjct: 1 MFNSLKIFLKLLKNTYISWDKNEPYARSATIAYYALFSLPSLLIIVVSIAGYFYGREAVQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNR 118
+ + A I + I L + ++ L++++N
Sbjct: 61 GRITGQIVDFIGLDAATAIENMIESAALSQDSILAVAFGFAMLIFGATGVFFQLKVAMNN 120
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--I 176
+ V ++ + ++ L + ++ + + + L + L +
Sbjct: 121 IWNVAARKTNFFKMVVDRMISLGMIFVIGLLLLITLVVSTLLQIIADEVGELFPNITESA 180
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + L + + LP + K+ + G T I +++G L + Y S
Sbjct: 181 VDISNSVLSFLFITTLFALIFKLLPDIRIKLKTTYTGAALTAILFLIGKFLISFYFGQ-S 239
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y +S++ L+++Y + GAE + K
Sbjct: 240 EPASVYGAASSVVLILLWVYYTCLILFFGAEFTVQYALVKKEK 282
>gi|326803368|ref|YP_004321186.1| YihY family protein [Aerococcus urinae ACS-120-V-Col10a]
gi|326651129|gb|AEA01312.1| YihY family protein [Aerococcus urinae ACS-120-V-Col10a]
Length = 320
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 116/262 (44%), Gaps = 2/262 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A + + + A+ ++ ALL++FP ++ AN+ L ++ + P I
Sbjct: 12 ASQSVQDASIGSSAAELAYYALLAIFPMLLLVANIIPLLPFDSA--QAVEWITAILPNEI 69
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + L + G +I+ + + SS G AL+ LNR Y + ++ ITR+
Sbjct: 70 EPLLIPTLKSYLDSTSAGSLSINTILVIWSSSAGFSALQRVLNRVYGNPDHKNAVITRIA 129
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
SF L +++ + S FV L + F P + + ++ + ++++FI ++
Sbjct: 130 SFLIAFLLVLSVGVFSLFFVFGETLLQIINNFVPLPLDFVELLLGLKWPVLLVSVFILML 189
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
F+++ +P + LPG + I ++ + LF Y+ S + + +++
Sbjct: 190 FIYIVVPNQPMTLKYALPGSVTAAIIVLLISSLFGVYVQFAGGSSVQNGTIGVFIALMLY 249
Query: 255 LYMLGVFFILGAELNASMIIYY 276
LY+ G+ I+G +N Y
Sbjct: 250 LYLNGMALIVGGLVNTIYYRYK 271
>gi|332711504|ref|ZP_08431435.1| putative membrane protein [Lyngbya majuscula 3L]
gi|332349482|gb|EGJ29091.1| putative membrane protein [Lyngbya majuscula 3L]
Length = 350
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 61/291 (20%), Positives = 122/291 (41%), Gaps = 22/291 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--------------GAHQ 57
+ + +E +++ ++ +A+L++FP I+ G +
Sbjct: 52 LRKTFKRAMERRLMGLSAEMAYNAMLALFPAILAILTAIGLFEYSLQLTWYHHPPELSEV 111
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ ++ P +PI + Q+ LF++S + A + SS + A +L+
Sbjct: 112 AQNQALKMMKEVGPAQAVQPIQEFTEQIHLSTNSSLFSLSFIIAIWVSSGALSAAMNALD 171
Query: 118 RAYRVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + R ++ +LIS G + + + LVI SF+ L V LL
Sbjct: 172 HIHHIPREQQRPFWKAKLISLGLTIGSIILLVIASFLVFISHWVLKTVVDT-SGASILLT 230
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VT 234
+ + + F++ + P+ ILPG + ISW V + LF HY+
Sbjct: 231 LWSLLTWPVALSMVAASFAFIYRYGPSRWQLGTPILPGAVLAAISWAVASGLFRHYVTAN 290
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA----SMIIYYWRKKP 281
FS Y+ +Y + +++ ++LYM + +LG +LN +M + R +P
Sbjct: 291 FSNYNKVYGTVTAVIILQLWLYMTSLLLLLGDQLNVIVGEAMQASHRRPRP 341
>gi|315224046|ref|ZP_07865887.1| YihY family protein [Capnocytophaga ochracea F0287]
gi|314946017|gb|EFS98025.1| YihY family protein [Capnocytophaga ochracea F0287]
Length = 303
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 108/271 (39%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ + AS IS S L++FPF++F NL ++ F +
Sbjct: 32 LYDLLELYTAGIIRGALTYRASAISYSFFLAIFPFLLFILNLIPYIPIENFQGDFWAFIE 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +D + GL + + + +NG+ A+ +Y R+
Sbjct: 92 DMLPPGTHDFFSDIFFDIADKKRGGLLSSVFFLSIFLMTNGIMAIFGGFEYSYHRQITRT 151
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L + ++ ++ ++ VF+ + L + + ++ +I L
Sbjct: 152 YIKQYLYALMVAIILALLVLFAVVVFIYYEVYLVPYLDKINFITDYETLLKISKIVFVAL 211
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ G + F + G +FT + + + LF YI FS Y+ +Y + +
Sbjct: 212 ITYFGTGLLFYFGTVEGKESKFFSAGSLFTVLLFGLTTYLFGIYIENFSRYNQLYGSIGA 271
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ L+++++ +LG ELNAS++
Sbjct: 272 LLIFLLYIWLNANILLLGFELNASLLKLKKH 302
>gi|294673735|ref|YP_003574351.1| YihY family protein [Prevotella ruminicola 23]
gi|294473194|gb|ADE82583.1| YihY family protein [Prevotella ruminicola 23]
Length = 307
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/265 (13%), Positives = 98/265 (36%), Gaps = 4/265 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ + I F + AS ++ S LL++ P + +A G ++++
Sbjct: 3 LKKIYRTLVLTIRFFTTKRVMTQASALTYSTLLAIVPILAVIFAIARGFGYNKYIEIWFR 62
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P+V ++ + + L Y V + + N ++V
Sbjct: 63 DALSSQPQVADILTDFVNSYLIHTQSGIFLGVGLLFMLYTVLMLVNNVEETFNEIWQVSN 122
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + + +V+ + + + + + L + ++
Sbjct: 123 ARPIMRSLTNYMAMFFVFPIIIVVSMGLSIFMATI----AQHTDGVVILGRAVRYLLDFS 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L + + +++++P KI S + I + ++ + + + H + + Y+ +Y
Sbjct: 179 PYLLLSLLFVGLYVYMPNTDVKIKSAIVPGILSGVAMQLLQLFYIHSQIWVTGYNAIYGS 238
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
A++ +++L + + GA+L
Sbjct: 239 FAALPLFMLWLQISWTICLFGAQLT 263
>gi|189347021|ref|YP_001943550.1| ribonuclease BN [Chlorobium limicola DSM 245]
gi|288559230|sp|B3EDE6|Y1521_CHLL2 RecName: Full=UPF0761 membrane protein Clim_1521
gi|189341168|gb|ACD90571.1| ribonuclease BN [Chlorobium limicola DSM 245]
Length = 441
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 92/262 (35%), Gaps = 7/262 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
++ +++ + + A ++ LLS+ PF+ ++ + ++
Sbjct: 37 YFRKLMPFFLKNLRHDKIFLSAGSLAFQTLLSIVPFLAVTLSVLRIFSFFASLNRYLEEF 96
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + + I L + + + + +LN ++V R
Sbjct: 97 IFQNFIPSAGEDLRIHFEAFIGKTSTVPLIGGLLLFIIALSLISTIDRTLNDIWKVRAPR 156
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + L V + A +YV G LL + +
Sbjct: 157 KPIQAFTLYWTVLTLGPVLIGSSLG-------ASSYVWYTVFTEGPLLELKIRLISFLPF 209
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + +++ +P + K+ G + + + + F Y+ F+T+ +Y ++
Sbjct: 210 VNSLLSFLLLYMLVPNRRVKLPHAFSGAVAAALLFELSKKWFVFYVSRFATFEHIYGAIS 269
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
++ ++Y+ + + GAEL
Sbjct: 270 AVPLLFFWIYIGWLVVLTGAEL 291
>gi|78187182|ref|YP_375225.1| ribonuclease BN [Chlorobium luteolum DSM 273]
gi|123582904|sp|Q3B399|Y1323_PELLD RecName: Full=UPF0761 membrane protein Plut_1323
gi|78167084|gb|ABB24182.1| tRNA-processing RNAse BN [Chlorobium luteolum DSM 273]
Length = 427
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 90/271 (33%), Gaps = 9/271 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDV 65
+ +++ + + A ++ LLS+ P + ++ + V D
Sbjct: 22 FFRSFVPFFLQNVRHDRIFLSAGSLAFQTLLSIVPLLAVVLSILNVFAVFAPLQPYVEDF 81
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + I + + + AL + + + +LN + V
Sbjct: 82 IVHNFVPGTGGMIREYFSGFIGNTFT-MPIFGALFLFIVALVLISTVDHTLNEIWEVHSP 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + + L V L A ++V G LL +
Sbjct: 141 RKVLQGFTLYWTVLTLGPVLLATSLA-------ASSFVWYTVFTEGPLLELKTRLLSLLP 193
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L+ ++L +P + + + L G + + + V F Y+ +T+ +Y L
Sbjct: 194 STITVLALLLLYLLVPNRRVRFLHALSGALVATLLFEVSKRWFAFYVANVATFEHIYGAL 253
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ I ++Y+ V + GAE+ +
Sbjct: 254 SVIPMLFFWIYLGWVVVLTGAEIVYCLGARR 284
>gi|323528569|ref|YP_004230721.1| ribonuclease BN [Burkholderia sp. CCGE1001]
gi|323385571|gb|ADX57661.1| ribonuclease BN [Burkholderia sp. CCGE1001]
Length = 312
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 99/281 (35%), Gaps = 6/281 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
++ +A + F+ + MA+ + + S+ P ++ +AG F G +
Sbjct: 16 RLRNALRVVVNAGKRFMSDRCPMMAASVGFYSAFSLAPTLLMVLAVAGWFFGEDAARGRL 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYR 121
D V G + A+ + + G+ +S + +S +L +L+
Sbjct: 76 FDQVRGILGKDAAEAMQTIVEHAHRASGGGIAAVVSLVLLIVGASATFTSLNTALDVVLE 135
Query: 122 VVEMRSWYITRLISF---GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + + + L + V + + A+ Y L+++
Sbjct: 136 AEKNVKSKSSLTWLVRTRLVSVGMVLGLGFLLVVSLVLDTAITYAGHALFGDSPLVIVTA 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ L + ++ A+ + G + I + VG LF Y+ T
Sbjct: 196 VLQTVLGLIVLGAAFTALLRWMSDARVSLAHAAVGGMTAAILFSVGRHLFGLYLTHAGTA 255
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S+ + S+ +++LY F+ GAE A + K
Sbjct: 256 SS-FGAAGSLAVLMMWLYFSAAVFLFGAETTAELAGRNEVK 295
>gi|251793486|ref|YP_003008215.1| ribonuclease BN [Aggregatibacter aphrophilus NJ8700]
gi|288559226|sp|C6AQL9|Y1801_AGGAN RecName: Full=UPF0761 membrane protein NT05HA_1801
gi|247534882|gb|ACS98128.1| tRNA-processing ribonuclease BN (RNase BN) [Aggregatibacter
aphrophilus NJ8700]
Length = 278
Score = 121 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 39/265 (14%), Positives = 95/265 (35%), Gaps = 8/265 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F + A +++ S +L++ P I+ ++ V +
Sbjct: 11 FWQRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + + + +K + + ++ + + ++ +LN + R + + I
Sbjct: 71 ASDVVGQYIDEFVNNSKQMSAVGIISLIVVALMLINSIDRTLNSIWHDTSTRPIFTSFAI 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + F L + L+ +
Sbjct: 131 YWLILTLGPLLVGTSIAASAYVKTMFENASGFSFGLK--------LLSFVPFLSTWFIFT 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+++ +P K I G + + + +G F YIVTF +Y +Y +A++ L++
Sbjct: 183 VIYMVVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQLIYGAMATLPIMLLW 242
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
+ + F +LGA+L A + K
Sbjct: 243 IQLSWTFVLLGAQLAAVLAEVRSEK 267
>gi|282881919|ref|ZP_06290564.1| T-RNA-processing ribonuclease BN [Peptoniphilus lacrimalis 315-B]
gi|281298194|gb|EFA90645.1| T-RNA-processing ribonuclease BN [Peptoniphilus lacrimalis 315-B]
Length = 299
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E D + + ++ +LS+FPF++ N+ FL I +
Sbjct: 14 LNFFDKLLYRLKENDITSYGAGLAFFLILSIFPFLIALINIVNFLDIINV--DNILNLMQ 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P + + + + +++ + L +IS LA + +S+ + L +N +Y + R++
Sbjct: 72 YFPNSVKEIVKNFFIELNITSSTELLSISVLAGLFSASSAINKLIKFINNSYGFEDNRNF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YATML 187
++ R+++ + LL ++++ V + F ++ +W ++
Sbjct: 132 FLNRVLAIIFTLLFIFMILLLIVSQVFGKIIFYKFISIFHIDSKIIYFLWIIANSLIPLI 191
Query: 188 ALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LF+ V+ F P K K +++PG +F+ + ++ V+F Y+ F YS Y
Sbjct: 192 YLFLTFSAVYRFAPCPPKNDKIKYKTVIPGSLFSTFAVIIATVIFAFYVNNFGKYSITYG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L I+ L++L++L ++GAE+N +
Sbjct: 252 SLGGIIVFLIWLFLLSTLILIGAEINIVLYSLKK 285
>gi|330995828|ref|ZP_08319725.1| YihY family protein [Paraprevotella xylaniphila YIT 11841]
gi|329574558|gb|EGG56123.1| YihY family protein [Paraprevotella xylaniphila YIT 11841]
Length = 437
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 92/275 (33%), Gaps = 4/275 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y + E ++ + + AS ++ S +L+ P + + LG +
Sbjct: 28 KKYAFNALRKLVLTSECYLSKHLNSHASALTYSTILATVPILAIIFAIGRGLGYGSIIEE 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I + + + + L Y + I+LN +
Sbjct: 88 KIKSNLSVNQQFADMVLNFINSYLEHTQSGIFIGFGLLLLLYTVVQLTANIEIALNSIWN 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS Y LL + ++I S + + + + +P L +
Sbjct: 148 VKNQRSIYRQITDYISVFLLLPILIIISSGLSIFLATI----AQDYPNFMVLSTTVKILI 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++++P + + + ++ + H + S+Y+ +
Sbjct: 204 KLSPYALSGLLFTALYMYMPNTDIRFRNAVLPGFIAGTAFQFLQYFYIHSQIWVSSYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y A++ ++++ + + GA+L+ +
Sbjct: 264 YGSFAALPMFMLWVNFSWIICLFGAQLSYANQNLR 298
>gi|225389046|ref|ZP_03758770.1| hypothetical protein CLOSTASPAR_02791 [Clostridium asparagiforme
DSM 15981]
gi|225044891|gb|EEG55137.1| hypothetical protein CLOSTASPAR_02791 [Clostridium asparagiforme
DSM 15981]
Length = 280
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 59/270 (21%), Positives = 117/270 (43%), Gaps = 3/270 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + F ++ A+ S +++ FPFI+ + + + +++ + P
Sbjct: 8 IKQIYDKFAADEMTVYAAQASFFTIIAAFPFIMLLLTVVQIVPSVS-QGELMEFILALVP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + +++A+ A + SS G+ ++ LNR VE R + +
Sbjct: 67 VGYKSVAFRVISDLSLKSPATMISVTAVTALWSSSRGMMSIAKGLNRVQGKVEKRWYIVK 126
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RLI GY ++ + V+ + V +V + FP + + I + R +
Sbjct: 127 RLICAGYTIVFILVCVLSLGLLVFGTTIQNFVLRQFPLIARVTQHIISLRTLLALAFFMF 186
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF--STYSTMYAGLASIM 249
++ ++P K + S LPG +FT W++ ++ F+ Y F S +S MY L +I+
Sbjct: 187 VFAGIYTYVPDRKLSLKSQLPGAMFTTAGWILFSMAFSLYFKLFGGSNFSYMYGSLTAIV 246
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++LY GAELN + I+ +
Sbjct: 247 LLMLWLYGCICVLFFGAELNYYLEIFRSEE 276
>gi|298490493|ref|YP_003720670.1| ribonuclease BN ['Nostoc azollae' 0708]
gi|298232411|gb|ADI63547.1| ribonuclease BN ['Nostoc azollae' 0708]
Length = 291
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 53/285 (18%), Positives = 120/285 (42%), Gaps = 5/285 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
+R + + + ++ +E +AS I+ +A+LS+FP I+ G +
Sbjct: 7 IRFFRHLNWRTFQKTMDRTMEGRLLGLASEIAFNAMLSLFPAIIAVLTAIGLVAESLQNT 66
Query: 59 VPTVIDVVFGAWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ PE I++ ++ +GLF++S + A + +S V + +
Sbjct: 67 FIQATMQLSQIVPEEAWSLISEFATKEIAESKNRGLFSVSFVIAIWTASGAVSTAMTAFD 126
Query: 118 RAYRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ ++ R ++ +LIS G + + L++ SF+ L L + + L LL
Sbjct: 127 QIEQISPENVRPFWKAKLISLGLTIGTILLLILASFLVFISDLLLGILIRGNGYLAFLLH 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I ++ + V+ + P+ ++PG + I W + + LF Y+ F
Sbjct: 187 IWQLLLWPLALVIVAATFSLVYRYGPSLWKPGTPLMPGAVLAAIFWAIVSALFRFYVTNF 246
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y+ +Y + + + +++L+M ++G +LN + ++
Sbjct: 247 GNYNKVYGTVGTFIVLMLWLWMGAFVLLVGKQLNVIVSESMKNRE 291
>gi|149185317|ref|ZP_01863634.1| hypothetical protein ED21_19727 [Erythrobacter sp. SD-21]
gi|148831428|gb|EDL49862.1| hypothetical protein ED21_19727 [Erythrobacter sp. SD-21]
Length = 297
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ A+L++FPF + GA + +G I+ V A P V+ I
Sbjct: 11 NDGFIHAGNLAYLAMLAIFPFFILGAAVFSAIGEESERAATINAVLYALPPVVGNVIEPV 70
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
V+ + L A A + + VE +R L RAY ++++ RL S G +L
Sbjct: 71 ARDVVQARSGWLLWAGAFVALWTVGSLVETIRDILRRAYGTEATKAFWKYRLFSTGVILG 130
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
A L++ I A + +FP L + LL + RI + + P
Sbjct: 131 AVFLLMLSLMAQFVIGTAQQVIEAYFPQLVDRLLELQLSRIVPAFGLFGSLYLIFYTLTP 190
Query: 202 AAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ + PGV+ T + W+ + + +F TY Y GLA +M L F +++G+
Sbjct: 191 SKYRRHRYPKWPGVLLTTLWWIAVTTIMPAVLSSFFTYDLTYGGLAGVMIALFFFWLVGL 250
Query: 261 FFILGAELNASMII 274
++GAELNA++
Sbjct: 251 GVVIGAELNAALAE 264
>gi|295835521|ref|ZP_06822454.1| membrane protein [Streptomyces sp. SPB74]
gi|197698571|gb|EDY45504.1| membrane protein [Streptomyces sp. SPB74]
Length = 299
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 100/276 (36%), Gaps = 3/276 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + + +D A+ ++ A+L++ P ++ + LG H
Sbjct: 1 MLRHAADWWPALRRTPLSLWNDDVTDDAAALTYYAMLALLPALLVTVVVFALLG-HDTAR 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
T+I + P + D + ++L A L +A + + + + R SL+R
Sbjct: 60 TLIAYLTDYAPGQSGPQLHDLLTRMLTENATAWPLIATGTFSAFWSACSYLAVFRRSLHR 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + R+ L LV+ + + V + + + + L
Sbjct: 120 MHCTTDARTPVKRAHRIVLTALALLGLLVLTALLLVLSNPVVDAIGRALHLDEGVALAWR 179
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R + + P + LPG + + W++ FT Y TY
Sbjct: 180 VLRWPMLLCLVSGLAWVAFSNGPRIAGRRRYSLPGGVLATVLWLLATAGFTLYTSLIGTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
S +Y LA I+ L++L++ + + GA+ A +
Sbjct: 240 SALYGSLAGIVVFLIWLWLSNLALLAGAQFAAELGK 275
>gi|295110194|emb|CBL24147.1| Predicted membrane protein [Ruminococcus obeum A2-162]
Length = 300
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 62/279 (22%), Positives = 125/279 (44%), Gaps = 3/279 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ +I I+ E+ A A+ + ++S PF++ L +
Sbjct: 3 KKSEKGTIALILGFIKRMQEDHIGAYAAQAAYFLIMSFIPFVLVLTALVQYTPL--TYRM 60
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ V+ G P+ + + I +V + A + L A + S G+++L LN Y
Sbjct: 61 LRQVIIGFVPDNLQDFVLKIIAEVFSKSAAVVPISG-LFALWSSGKGMQSLIAGLNVIYH 119
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E R+W RL S Y+ L + ++ + V A + P LG ++ I + +
Sbjct: 120 VKETRNWLTNRLYSMLYMFLFIIAIITSLLLLVMGNRIHAELIVHMPLLGKVVGRILSAK 179
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + LF+ + ++ +LP K+ + S +PG ++W + + F+ Y F +S M
Sbjct: 180 TFLVFVVLFLVFLVLYRYLPNRKASLKSQVPGAFIIAVAWSLFSYFFSFYFTFFPNFSNM 239
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y L++++ +++LY+ + GAELNA + + +
Sbjct: 240 YGSLSALIMVMLWLYVCMNLLLYGAELNAYFEKQFRQAQ 278
>gi|71281439|ref|YP_267359.1| ribonuclease BN [Colwellia psychrerythraea 34H]
gi|81175003|sp|Q489A5|Y609_COLP3 RecName: Full=UPF0761 membrane protein CPS_0609
gi|71147179|gb|AAZ27652.1| ribonuclease BN [Colwellia psychrerythraea 34H]
Length = 303
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 102/277 (36%), Gaps = 6/277 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ ++++ E +A ++S L+S+ P IV ++ + I
Sbjct: 16 FWHDNKELLFYFTRRVRREQIQVVAGYLSYVCLMSLVPLIVVMLSVMTAFPLFAELQQSI 75
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ A + + L A + ++ + + ++ + N+ +RV
Sbjct: 76 EQFVYQNFVPAAGDVVQQYLTGFVANASKMSAVAISFLFLAALLLISSIDNTFNKIWRVT 135
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R + + + + L + + + + +A ++L +
Sbjct: 136 DKRRTITSFAMYWMVLTLGPILVGASIALSSYLVSIVAV------DEYDVLGLSDMFLRM 189
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L+ I I +++ +P L G I + + + F YI F +Y +Y
Sbjct: 190 LPLLSSIIAFIILYIAVPNKAVPFRFALSGAIVAGVLFELAKKAFALYITAFPSYQVIYG 249
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA+I +++Y+ + + GA + S+ Y K+
Sbjct: 250 ALATIPIIFLWVYVSWIIVLTGALITVSLQEYEILKE 286
>gi|254451160|ref|ZP_05064597.1| ribonuclease BN [Octadecabacter antarcticus 238]
gi|198265566|gb|EDY89836.1| ribonuclease BN [Octadecabacter antarcticus 238]
Length = 275
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ F+I ++ E++ +++ ++ L ++FP I +L G V + +D
Sbjct: 3 WRPAFEITRQVLDDLREKNAGLISAGVAFYGLFAIFPGIAATISLFGIFADPIVVESQLD 62
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYR 121
++ G PE + K +I +L+ + L + L A + + GV AL LN +
Sbjct: 63 LMAGLMPEGVFKLFQTQIDGLLSARSATLGVTTLLSIGLALWSARTGVAALIRGLNAIFD 122
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R L++ + ++ + V P+ LA + P + +++ R
Sbjct: 123 -RPNRGSIRHVLVALLLTICLVGIAIVALLMVVVAPIFLAVI----PFNTDQTVLLELFR 177
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ LF+GL ++ + P + +++ + PG W+ + F+ Y+ FSTY+
Sbjct: 178 WSLVIAVLFVGLGLLYRYGPNRRFARMGWVTPGAFVVVAFWLAMSAAFSTYVANFSTYNE 237
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y L +++ L + Y+ ++GA LN ++
Sbjct: 238 VYGSLGAVIALLFWFYLSAYLILVGAALNNTLDRRK 273
>gi|89056049|ref|YP_511500.1| ribonuclease BN, putative [Jannaschia sp. CCS1]
gi|88865598|gb|ABD56475.1| ribonuclease BN putative [Jannaschia sp. CCS1]
Length = 325
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 52/277 (18%), Positives = 107/277 (38%), Gaps = 8/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
D+ ++ + +A+ I+ +L++FP + L G + +
Sbjct: 24 RGFLDVGLRVVKRVGRDQLSLIAAGIAFFGMLALFPALAALVALGGAFVDPVQIVEGAEA 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRV 122
A P + + +++++ + + L + + A Y SS G+ L LN AY
Sbjct: 84 YLSALPIAAREIVQGQMVELASADSDTLSLAAMIAFGIAIYSSSRGMANLVSGLNVAYEE 143
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R + +L + A + ++ +PLA + + L + R
Sbjct: 144 EEERGFLALQLRITALTVFALIVGLLSLGALAVLPLATELIFR----SELLTQVALILRW 199
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + ++ F P+ + K I PG + + WV F Y+ F Y+
Sbjct: 200 PLLLGFASVAFTIIYRFGPSRRQAKWRWIAPGGVLAVLIWVTATFGFAWYVQAFGAYNET 259
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ LA ++ L++L++ +LGA L+A M +
Sbjct: 260 FGTLAGVIVLLMWLWLSAFSILLGATLDAEMEAQTGK 296
>gi|269123586|ref|YP_003306163.1| ribonuclease BN [Streptobacillus moniliformis DSM 12112]
gi|268314912|gb|ACZ01286.1| ribonuclease BN [Streptobacillus moniliformis DSM 12112]
Length = 405
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 103/267 (38%), Gaps = 7/267 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
V ++ + + +D +AS+++ +L++FPF +A G + + ++ +
Sbjct: 7 KVISMVKIYFKKYFSKDLSLLASNLTYMMILTIFPFFAIILGIAKGFGLDEKLIAQVNAL 66
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+V+A + + L + L + + + L + N + V + R
Sbjct: 67 LPQNEQVLAYILETTNNLIENARGGILTGLGILILIFSVISMFDLLENTFNDIWNVRKNR 126
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ + V + + ++++ + + ++ + M
Sbjct: 127 NFTSKIISYTALVFITPIFILLILASSSVLVEFIKSFA-------DISNLTKYILKVFNM 179
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + + +P + KI+ + G + I + V++ + + S Y+ +Y LA
Sbjct: 180 FMRMMFISGLFILIPNKRVKILPAIIGAAISDIGLNILYVIYVYLQFSISRYNIIYGSLA 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMI 273
I L+++ ++GA++ ++
Sbjct: 240 FIPIFLIWIKYAWTIILIGAQITYTIQ 266
>gi|154505816|ref|ZP_02042554.1| hypothetical protein RUMGNA_03356 [Ruminococcus gnavus ATCC 29149]
gi|153793834|gb|EDN76254.1| hypothetical protein RUMGNA_03356 [Ruminococcus gnavus ATCC 29149]
Length = 289
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 6/249 (2%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+ P I+ F VID V +P + I + QV + +
Sbjct: 36 VLSMIPIILLLLTAVQFTP--ATYANVIDAVEQVFPTSVQGFIRSIVTQVYFSQSAKIIP 93
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
I+ L A + + GV ++ LN Y E R++ RL + Y ++ + +V+ + V
Sbjct: 94 ITILVALWSAGRGVLSVTAGLNCIYGNTETRNYVYLRLRASLYTVIFILAIVLSLVLSVF 153
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK----SKIMSIL 211
A + K P L+ I R T+ L + V+ +LP + + + L
Sbjct: 154 GNSISAMIYKHAPFWSTLMQYIIKIRTVMTLAVLTVFWDLVYKYLPNRRATQKTTLRKQL 213
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG +FT W++ + +F+ Y+ F +S MY + +I+ +++LY+ +LG E+NA
Sbjct: 214 PGAVFTACGWLLISFIFSIYLDIFEGFSDMYGSMTTIVLIMLWLYLCMYVILLGGEVNAL 273
Query: 272 MIIYYWRKK 280
+ Y K
Sbjct: 274 LEKYLDNHK 282
>gi|158313101|ref|YP_001505609.1| ribonuclease BN [Frankia sp. EAN1pec]
gi|158108506|gb|ABW10703.1| ribonuclease BN [Frankia sp. EAN1pec]
Length = 360
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 99/277 (35%), Gaps = 9/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + +A+ LLS+ P ++ G++G + +V
Sbjct: 60 WGALRLARTTVANAWRHRVLGLAAEAGFWQLLSMPPLLLALLGTIGYIGDLLGGDALDNV 119
Query: 66 VFGAWPEVI--------AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ I ++L+ + +I + + + S + ++
Sbjct: 120 RLSILDGADNLLTASVVDDTVRPTIDEILSRGRPDVISIGFVLSLWTGSTAMATFVNTIT 179
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
AY E+RS +RL++ G L T V++ V P L+ + + ++
Sbjct: 180 IAYGQRELRSAVRSRLLALGLFLAQVATGVLLLPALVLGPGLLSDMLNS-GRHPVVDDLL 238
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ L ++ + LPG W+VG+ L Y+ +
Sbjct: 239 KILFWPVVGVVSLAMLTTLYHLALPVRRSWRRALPGAALALFLWLVGSYLLRMYLELVFS 298
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y L + + L+F Y+ + +LGAELNA++
Sbjct: 299 NELVYGSLGAPVAALLFFYITALAVLLGAELNAAIDE 335
>gi|189183815|ref|YP_001937600.1| hypothetical protein OTT_0908 [Orientia tsutsugamushi str. Ikeda]
gi|189180586|dbj|BAG40366.1| hypothetical protein OTT_0908 [Orientia tsutsugamushi str. Ikeda]
Length = 281
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 129/275 (46%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ AI +E DG A +++ LLS+FPF++F + FLG + I
Sbjct: 2 IWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIA 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ P +A+ I I ++L P + L T++ + SS+ VE +R LNR ++V
Sbjct: 62 ILLSNLPANVAETIVPRIHEILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNS 121
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+++ RL+S L+ S+ + + +FV P+ L + L I R
Sbjct: 122 PPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKIPTTIVFTKTLSPIWILLRYTF 181
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L LF + ++ F+P K ++PG I T + W+ + + +S + +Y
Sbjct: 182 IVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYGS 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L SI+ L+F +++ + FI GAE N ++ +K
Sbjct: 242 LGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKK 276
>gi|307727161|ref|YP_003910374.1| ribonuclease BN [Burkholderia sp. CCGE1003]
gi|307587686|gb|ADN61083.1| ribonuclease BN [Burkholderia sp. CCGE1003]
Length = 312
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 100/281 (35%), Gaps = 6/281 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
VF +I +A + F+ + MA+ + + S+ P ++ +AG F G +
Sbjct: 16 RLSNVFTVIVNAGKRFMSDRCPMMAASVGFYSAFSLAPTLLMVLAVAGWFFGEDAARGRL 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
D + G + A+ + + A + +S + +S +L +L+
Sbjct: 76 FDQMRGILGKDAAEAMQTIVEHAHRANGSGIAAVVSVVLLIVGASATFTSLNTALDVVLE 135
Query: 122 VVEMRSWYITRLISF---GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + + + L + V + + A+ Y L+++
Sbjct: 136 AEKDVKNKSSITWLVRTRLVSVSMVLGLGFLLVVSLVLDTAITYAGHAIFGNSPLVIVTA 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ L + ++ AK + G + + + G LF Y+ T
Sbjct: 196 VLQTVLGLIVLGAAFTALLRWMSDAKVSLTHAAIGGMTAAVLFSAGRHLFGLYLTHAGTA 255
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S+ + S+ +++LY F+ GAE A + K
Sbjct: 256 SS-FGAAGSLAVLMMWLYFSAAVFLFGAETTAELAGRNEVK 295
>gi|182436950|ref|YP_001824669.1| putative ribonuclease BN [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326777560|ref|ZP_08236825.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|178465466|dbj|BAG19986.1| putative ribonuclease BN [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326657893|gb|EGE42739.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 317
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 96/275 (34%), Gaps = 4/275 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA F DG++ A ++L +L++ P ++ L+ L + G
Sbjct: 33 WPLVRDAFVRFRYADGFSHARALALQTILAIIPLVIAFVGLSAELHTESVGRLAELTIHG 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF---SSNGVEALRISLNRAYRVVEM 125
A+ + D + + G L A+ + + + NR Y V
Sbjct: 93 ISEGPSAEVVDDALDRHRRSDGDGPEVALWLGLAFSLANVTTAMCQIERGANRIYGVERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ L L A + L I S + VA +A + + R
Sbjct: 153 RVFHHKYLRGLVMALSAGIPLGIGSVMMVAGGDLVAAAASVYGLGDTARETLTLLRWPLG 212
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L I + P + + G + W V L + Y+ ++ T+Y
Sbjct: 213 FLLALISASAIFRRSPRRRQPGYTWLAFGAAVYLVLWTVLTWLLSLYLGFSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++ M+ L++ Y+ +G A + R+
Sbjct: 273 LSAFMSLLLWAYLTSTALFVGLSFAAQLEAVRARR 307
>gi|148284876|ref|YP_001248966.1| putative ribonuclease BN [Orientia tsutsugamushi str. Boryong]
gi|146740315|emb|CAM80715.1| putative ribonuclease BN [Orientia tsutsugamushi str. Boryong]
Length = 281
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 71/275 (25%), Positives = 129/275 (46%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ AI +E DG A +++ LLS+FPF++F + FLG + I
Sbjct: 2 IWRYIRCLAQAIFKTIEHDGIEHAGYMAFMILLSIFPFVMFFLASSSFLGVSELGKNGIA 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ P +A+ I I ++L P + L T++ + SS+ VE +R LNR ++V
Sbjct: 62 ILLSNLPANVAETIVPRIHEILENPPQSLLTLAIFGTIWTSSSFVEGIRTILNRVHQVNC 121
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+++ RL+S L+ S+ + + +FV P+ L + L I R
Sbjct: 122 PPPYWLRRLLSITQFLITSIIIFLTIVLFVFTPIILRKIPTTIVFTKTLSPIWILLRYTF 181
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L LF + ++ F+P K ++PG I T + W+ + + +S + +Y
Sbjct: 182 IVLTLFFTVSTIYYFVPNTNLKFREVVPGAIITVMLWIFSGTMLSKSTAYYSQLNLIYGS 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L SI+ L+F +++ + FI GAE N ++ +K
Sbjct: 242 LGSIIITLLFFHIIAIIFIYGAEFNHQLLKKNGKK 276
>gi|303235668|ref|ZP_07322275.1| YihY family protein [Prevotella disiens FB035-09AN]
gi|302484115|gb|EFL47103.1| YihY family protein [Prevotella disiens FB035-09AN]
Length = 445
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 109/270 (40%), Gaps = 3/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +Y A++ ++E+ A A+ ++ + +L++ P + +A G ++ +
Sbjct: 25 KSRLIGLLQRLYLAVKLYLEQGHVAAATELAFTTILAIVPIVAIIFGIANGFGFGTYIES 84
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V F A P+V I + I + Y + + + + ++
Sbjct: 85 VFRESFSAQPQVADWLINLTRSYLEHAQTGLFIGIGLVFMLYSVISLIHNIESVFDDIWQ 144
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R + + L + +++MS + + + + + ++ L +
Sbjct: 145 VKTARPISRIIVDYTAMMFLMPIGIIVMSGLSIFVFSYVEGLTQYLFVGT---LTRFTFH 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L L + + ++ F+P AK KIM ++ + + ++ H + ++Y+ +
Sbjct: 202 YVVPWLILTVMFVVLYTFMPNAKIKIMKVICPAMLASFLMLCLQAVYIHGQIFLTSYNAI 261
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y LA++ ++++ + + AEL+ +
Sbjct: 262 YGSLAALPLFMLWMQVSWHICLFCAELSYA 291
>gi|150260908|ref|ZP_01917636.1| ribonuclease BN [Yersinia pestis CA88-4125]
gi|162419107|ref|YP_001604675.1| ribonuclease BN [Yersinia pestis Angola]
gi|165926182|ref|ZP_02222014.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936252|ref|ZP_02224821.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011441|ref|ZP_02232339.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213649|ref|ZP_02239684.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167402120|ref|ZP_02307597.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419393|ref|ZP_02311146.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167427048|ref|ZP_02318801.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470253|ref|ZP_02334957.1| ribonuclease BN [Yersinia pestis FV-1]
gi|218927249|ref|YP_002345124.1| ribonuclease BN [Yersinia pestis CO92]
gi|229836136|ref|ZP_04456304.1| Ribonuclease BN [Yersinia pestis Pestoides A]
gi|229839875|ref|ZP_04460034.1| Ribonuclease BN [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841957|ref|ZP_04462112.1| Ribonuclease BN [Yersinia pestis biovar Orientalis str. India 195]
gi|229900602|ref|ZP_04515726.1| Ribonuclease BN [Yersinia pestis Nepal516]
gi|32699645|sp|Q8ZJR1|Y028_YERPE RecName: Full=UPF0761 membrane protein YPO0028/y3801/YP_0029
gi|226737465|sp|A9R654|Y034_YERPG RecName: Full=UPF0761 membrane protein YpAngola_A0034
gi|288559247|sp|A4TSF8|Y3877_YERPP RecName: Full=UPF0761 membrane protein YPDSF_3877
gi|288559251|sp|Q1C246|Y3514_YERPA RecName: Full=UPF0761 membrane protein YPA_3514
gi|288559256|sp|Q1CN43|Y254_YERPN RecName: Full=UPF0761 membrane protein YPN_0254
gi|115345860|emb|CAL18718.1| ribonuclease BN [Yersinia pestis CO92]
gi|149290316|gb|EDM40393.1| ribonuclease BN [Yersinia pestis CA88-4125]
gi|162351922|gb|ABX85870.1| tRNA-processing ribonuclease BN [Yersinia pestis Angola]
gi|165915866|gb|EDR34474.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922042|gb|EDR39219.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989587|gb|EDR41888.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205051|gb|EDR49531.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166963387|gb|EDR59408.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167048495|gb|EDR59903.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167053975|gb|EDR63806.1| tRNA-processing ribonuclease BN [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|229681941|gb|EEO78033.1| Ribonuclease BN [Yersinia pestis Nepal516]
gi|229690267|gb|EEO82321.1| Ribonuclease BN [Yersinia pestis biovar Orientalis str. India 195]
gi|229696241|gb|EEO86288.1| Ribonuclease BN [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229706584|gb|EEO92590.1| Ribonuclease BN [Yersinia pestis Pestoides A]
gi|262360214|gb|ACY56935.1| ribonuclease BN [Yersinia pestis D106004]
gi|262364161|gb|ACY60718.1| ribonuclease BN [Yersinia pestis D182038]
gi|320017061|gb|ADW00633.1| Ribonuclease BN [Yersinia pestis biovar Medievalis str. Harbin 35]
Length = 294
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWP 71
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 21 RMLYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFM 80
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 81 PATGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFS 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + A + +I +L ++
Sbjct: 140 FAVYWMVLTLGPILVGASMVISSYLLSL------HWLAHARVDSMIDEILRVFPLLISWV 193
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ +P + L G + + + +G F YI F +Y +Y LA I
Sbjct: 194 SFWLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPIL 253
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y +
Sbjct: 254 FLWVYWSWCIVLLGAEITVTLGEYRAERH 282
>gi|317497559|ref|ZP_07955877.1| ribonuclease BN-like family protein [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895118|gb|EFV17282.1| ribonuclease BN-like family protein [Lachnospiraceae bacterium
5_1_63FAA]
Length = 289
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 2/274 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ +I I+ ++ A ++ + +LS FPF++ +L + +I++
Sbjct: 2 LKLISMIGSVIDKAQKDHVTAFSAQAAFFTILSFFPFMIVLLSLTRYFPI--TPNDMIEL 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P + + I + +I+ L + +S G+ +L LN + + E
Sbjct: 60 VRTYLPPKYSGMVVPIIRSLNGKLTTTYMSITILTLLWSASKGILSLMTGLNTIHEIPEK 119
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++++ R IS Y+ L ++ ++ + + L + +F P L N + R +
Sbjct: 120 RNYFVLRFISSIYIGLFAIAVLFGLILLLFGNSLLIQLYRFEPVLENKHVFFATIRFFLA 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ I ++ FLP+ K ILPG F+ +W V + F+ Y FS +STMY GL
Sbjct: 180 FFTFMVVFIIMYRFLPSENFKTKQILPGAFFSSAAWFVLSFFFSMYFDNFSFFSTMYGGL 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
SI+ L +LY + +GAE+N I +K
Sbjct: 240 TSILLTLFWLYFCMMMLFIGAEINHYFISQSSKK 273
>gi|3608389|gb|AAC35915.1| Orfde2 [Enterococcus faecalis OG1RF]
Length = 302
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 15 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + +++
Sbjct: 73 IPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V + + + ++ F +++ + T + L
Sbjct: 133 LVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTVVL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 193 LVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 253 ILMLWLNFAATIIILGAIVNAVVDEYLXGXK 283
>gi|238797631|ref|ZP_04641127.1| tRNA-processing ribonuclease BN [Yersinia mollaretii ATCC 43969]
gi|238718495|gb|EEQ10315.1| tRNA-processing ribonuclease BN [Yersinia mollaretii ATCC 43969]
Length = 273
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 95/267 (35%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ ++ H++ +LLS+ P I L + + +F +
Sbjct: 2 LYTRIDKDGLTMLSGHLAYVSLLSLVPLITVVFALFAAFPMFADISIKLKAFIFSNFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN+ +R RS +
Sbjct: 62 TGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNQIWRSKTQRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + + + + A + +I +L ++
Sbjct: 121 VYWMVLTLGPILVGASMVISSYLLSL------QWLATAQVDSMIDEILRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDALIGAFVAALLFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y +
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRALRH 261
>gi|153003611|ref|YP_001377936.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
gi|152027184|gb|ABS24952.1| putative ribonuclease BN [Anaeromyxobacter sp. Fw109-5]
Length = 434
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 33/273 (12%), Positives = 86/273 (31%), Gaps = 14/273 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPT 61
+ + A+ + A ++ L ++ P +V ++ G +
Sbjct: 13 RLLRSTWRALGTALRVLESDTVRLRAMALTYITLFALVPALVVAFSVVQAFTGMDRISDL 72
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + + + + + ++ A + + + + + ++N +
Sbjct: 73 VHEFLISNLAVGARDTLEPYLQRFVSNAHATSAGIVGGALLVWSAISLFTNVDAAVNDIW 132
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R +I + + L + L + LA I
Sbjct: 133 GVKRRRPLSQQAVIYWMGITLGPLLLAGSLTLAATGRAFLAGTG------------IRAL 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + L V+L +P K +I S + + ++W + + I Y
Sbjct: 181 AVAGSALLTCAFFALVYLLVPYTKVRIKSAVIAGLAAGVAWELAKWAYALGIGGIVRYHA 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y +A++ + +L++ + GA L +
Sbjct: 241 IYGSVAAVPIFIFWLFVSWSIVLFGARLAFVIQ 273
>gi|238794554|ref|ZP_04638162.1| tRNA-processing ribonuclease BN [Yersinia intermedia ATCC 29909]
gi|238726134|gb|EEQ17680.1| tRNA-processing ribonuclease BN [Yersinia intermedia ATCC 29909]
Length = 273
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 96/267 (35%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ +A H++ +LLS+ P + L + + +F +
Sbjct: 2 LYARIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNIIWRSKTQRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + + + + A + +I +L ++
Sbjct: 121 VYWMVLTLGPILVGASMVISSYLLSL------QWLANAQVDSMIDEALRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDALIGALVAALLFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYREQRH 261
>gi|315149181|gb|EFT93197.1| YihY family protein [Enterococcus faecalis TX0012]
Length = 302
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 15 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + +++
Sbjct: 73 IPKDVYMNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V + + + ++ F +++ + T + L
Sbjct: 133 LVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTVVL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 193 LVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 253 ILMLWLNFAATIIILGAIVNAVVDEYLSGDK 283
>gi|300813395|ref|ZP_07093746.1| YihY family protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512538|gb|EFK39687.1| YihY family protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 299
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 54/270 (20%), Positives = 121/270 (44%), Gaps = 7/270 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E D + + ++ +LS+FPF++ N+ FL I +
Sbjct: 14 LNFFDKLLYRLKENDITSYGAGLAFFLILSIFPFLIALINIVNFLDIINI--DNILNLMQ 71
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P + + + + +++ + L +IS LA + +S+ + L +N +Y + R++
Sbjct: 72 YFPNSVKEIVKNFFIELNITSSTELLSISVLAGLFSASSAINKLIKFINNSYGFEDNRNF 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YATML 187
+ R+++ + LL ++++ V + F ++ +W ++
Sbjct: 132 FFNRVLAIIFTLLFIFMILLLIVSQVFGKIIFYKFISIFHIDSKIIYFLWIIANSLIPLI 191
Query: 188 ALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LF+ V+ F P K K +++PG +F+ + ++ V+F Y+ F YS Y
Sbjct: 192 YLFLTFSAVYRFAPCPPKNDKIKYKTVIPGSLFSTFAVIIATVIFAFYVNNFGKYSITYG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L I+ L++L++L ++GAE+N +
Sbjct: 252 SLGGIIVFLIWLFLLSTLILIGAEINIVLY 281
>gi|213962463|ref|ZP_03390725.1| ribonuclease BN [Capnocytophaga sputigena Capno]
gi|213954789|gb|EEB66109.1| ribonuclease BN [Capnocytophaga sputigena Capno]
Length = 303
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 108/271 (39%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ I ++ AS IS S L++FPF++F NL ++ F +
Sbjct: 32 LYDLLELYIVGIMKGTLTYRASAISYSFFLAIFPFLLFILNLIPYIPIDDFQVDFWGFID 91
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +D + GL + + + +NG+ A+ +Y R+
Sbjct: 92 DMLPPGTHDFFSDIFFDIAEKKRGGLLSSVFFLSIFLMTNGIMAIFGGFEFSYHRQITRT 151
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L + ++ S+ ++ F+ + L + + ++ +I L
Sbjct: 152 YVKQYLYALMVAIILSLLVLFAVVTFIYYEIYLFPYLDKINFITDYETLLKISKIVFVAL 211
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ G + F + G + T + + + LF YI FS Y+ +Y + +
Sbjct: 212 ITYFGTGVLFYFGTVEGKESKFFSAGSLLTVLLFGLTTFLFGIYIENFSQYNQLYGSIGA 271
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ L+++++ +LG ELNAS++
Sbjct: 272 LLIFLLYIWINANILLLGFELNASLLKLKKH 302
>gi|315063173|gb|ADT77500.1| predicted inner membrane protein [Escherichia coli W]
Length = 259
Score = 120 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/258 (17%), Positives = 90/258 (34%), Gaps = 10/258 (3%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPITDEI 82
+A +++ +LLS+ P + L V + +F + I I
Sbjct: 1 MTTLAGNLAYVSLLSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYI 60
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
Q +A K + + A + + ++ +LN +R R + + + + L
Sbjct: 61 EQFVANSNK-MTAVGACGLIVTALLLMYSIDSALNTIWRSKRARPKIYSFAVYWMILTLG 119
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + + +L +I N +L +I ++ +P
Sbjct: 120 PLLAGASLAISSYLLSLR--------WASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPT 171
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + G + + G F YI F +Y +Y LA I V++Y
Sbjct: 172 IRVPNRDAIVGAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIV 231
Query: 263 ILGAELNASMIIYYWRKK 280
+LGAE+ ++ Y K+
Sbjct: 232 LLGAEITVTLGEYRKLKQ 249
>gi|295134558|ref|YP_003585234.1| ribonuclease BN-like family protein [Zunongwangia profunda SM-A87]
gi|294982573|gb|ADF53038.1| ribonuclease BN-like family protein [Zunongwangia profunda SM-A87]
Length = 338
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 103/282 (36%), Gaps = 6/282 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVP 60
+ F ++ A + + + ++ ++ I+ AL S+ ++ +AG+
Sbjct: 9 KAIKSFFKLMARAFTSWNKNEPYSRSATIAYYALFSLPSLLIIVVTIAGYFLGSRTTVQD 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + A + I + + + ++ L++++N
Sbjct: 69 RITSEISRFIGGDTANAVEGMISSAWLSEDSTFAIIFGVGMLLFGATGVFVQLKLAMNNI 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
+ V E R+ + L+ + + ++ V + I L ++ A ++
Sbjct: 129 WNVAEKRNNFWGLLLDRAISFGMILVVGLLLLVSLVISALLNLIKDSIQLSAPHITGAVL 188
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ L + + + LP K K + G T I +++G L + Y T S
Sbjct: 189 SIANFIISFLVITSLFMAIFKILPDIKIKWRTTFWGASLTTILFLIGYYLISFYFGT-SD 247
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y G +S++ L+++Y + GAE + K
Sbjct: 248 PTSVYGGASSVVLILLWVYYACMIMFYGAEFTVQYALVKNEK 289
>gi|296284818|ref|ZP_06862816.1| hypothetical protein CbatJ_14416 [Citromicrobium bathyomarinum
JL354]
Length = 260
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 92/265 (34%), Gaps = 17/265 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D++ E++ +A+ +S A L++ P + L G + V ID +
Sbjct: 1 MLDLLKRTWRGASEDNAGLVAAGVSYYAFLAMVPLLAVCVLLYGLVATPDAVARDIDALG 60
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVE 124
P A I D++ V A+ A + + N ++ LN + V E
Sbjct: 61 RGLPPSAASLIGDQLQSVTEAKDNAKGLGLAVALAIALFGARNAARSIIGGLNVVFNVEE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + + I+ L A L +
Sbjct: 121 DRGFLKSNAIALVVTLGAVFALALAGTAISLAAALPGAAAPVASF-------------AL 167
Query: 185 TMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+A +G F++ F P ++LPG + WV LF Y+ F+ Y+ Y
Sbjct: 168 MFIAGMLGAGFLYRFAPNRPDPPWSAVLPGAALFALVWVGATALFGSYVANFANYNATYG 227
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
L +++ L + Y+ +LG E
Sbjct: 228 SLGAVVILLTWFYLSAFVLLLGGEF 252
>gi|320007152|gb|ADW02002.1| ribonuclease BN [Streptomyces flavogriseus ATCC 33331]
Length = 317
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 96/275 (34%), Gaps = 4/275 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG++ + ++L +L+V P ++ L+ L +
Sbjct: 33 WPLLRDSFVRFRYADGFSHSRALALQTVLAVVPLVIAFVGLSTALHTENLGRVAELTIQR 92
Query: 69 AWPEVIAKPITDEILQVL---AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ + D + + A+ + + ++ + + NR Y V
Sbjct: 93 ITAGPSAEVVEDALDRSRRRADDGAQLALWFGLVFSLTNTTTAMCQIERGANRIYGVERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ L L A + L I VA +A V + R A
Sbjct: 153 RVFHRKYLRGLVMSLTAGIPLGIGFVAMVAGGDLVAAVVDVYDLGAGARSAWDMLRWPAG 212
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + + P + + G + W L + Y+ ++ T+Y
Sbjct: 213 VLLVILSASAIFRRSPRRRQPGYTWLAFGAAVYLVLWTTLTWLLSLYLEVSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L + M+ L++ Y+ + LG A + ++
Sbjct: 273 LTAFMSLLLWAYLTSIALFLGLSFAAQLEAVRAKR 307
>gi|170717323|ref|YP_001784434.1| ribonuclease BN [Haemophilus somnus 2336]
gi|226737448|sp|B0UTI5|Y1104_HAES2 RecName: Full=UPF0761 membrane protein HSM_1104
gi|168825452|gb|ACA30823.1| putative ribonuclease BN [Haemophilus somnus 2336]
Length = 288
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 102/277 (36%), Gaps = 6/277 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
M + + F + A +++ S L++ P I+ ++ +
Sbjct: 1 MSNLCRNIKVFFKVFLYRFKQNKLNQAAGYLTYSTTLALVPLIMVFFSVFAAFPVFNEIT 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + I Q + +K + + ++ + + ++ +LN
Sbjct: 61 GELKQFIFTNFAPSTGDAVGEYIDQFVNN-SKQMSAVGIISLIVVALMLIHSIDRTLNSI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R + I + + L + + + + Y + L + ++
Sbjct: 120 WLDTSVRPAIFSFAIYWLILTLGPIVIATSIGISTYVTKFATYTFEQDLGLSVGIKLLS- 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ +++ +P K I+ G + + + +G FT YI TF +Y
Sbjct: 179 ---LMPFFLTWFIFTVLYMVVPNKKVSIIHSAAGALIAAVFFTLGKQAFTWYITTFPSYQ 235
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y +A++ L+++ + +LGA+L+A +
Sbjct: 236 LIYGAMATLPIMLLWIQLSWTAVLLGAQLSAVLADMR 272
>gi|310816214|ref|YP_003964178.1| ribonuclease BN [Ketogulonicigenium vulgare Y25]
gi|308754949|gb|ADO42878.1| ribonuclease BN [Ketogulonicigenium vulgare Y25]
Length = 288
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 109/278 (39%), Gaps = 10/278 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I+D E +A+ ++ + +FP + L G L V +
Sbjct: 12 IRYAYIFIWDVWNRGAAERVGLIAAGVAFWGVFGLFPALTALIALFGLLADPMVVQNQLI 71
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYR 121
+ P + + D++ +++ + L + + A + + GV AL LN
Sbjct: 72 LAHDFLPPGAYELVADQVTRLVEPGPRTLGWATIVSTGVALWSARAGVGALAEGLNAVQG 131
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + + + +T+V + + + + F GN+ ++ R
Sbjct: 132 TGSRNGFVHIMVAMLMTIAMVGITMVGLLV-----TILVPIIVLIFQPPGNVATLLEFMR 186
Query: 182 IYATMLALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ I L ++ + P+ + + I PG + + W+ + LF+ Y+ F Y+
Sbjct: 187 WVVMLTSVLIALGLLYRYGPSRRRGLRFSWITPGSVIVLVLWLGVSYLFSLYVGNFGNYN 246
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y + +++ +++LY+ +LG LNA +
Sbjct: 247 EVYGSIGAVIALMMWLYISAFLVLLGGALNAEIAARRG 284
>gi|170026393|ref|YP_001722898.1| ribonuclease BN [Yersinia pseudotuberculosis YPIII]
gi|226737466|sp|B1JR04|Y4186_YERPY RecName: Full=UPF0761 membrane protein YPK_4186
gi|169752927|gb|ACA70445.1| ribonuclease BN [Yersinia pseudotuberculosis YPIII]
Length = 294
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWP 71
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 21 RMLYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFM 80
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 81 PATGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFS 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + A + +I +L ++
Sbjct: 140 FAVYWMVLTLGPILVGASMVISSYLLSL------HWLAHARVDSMIDEILRVFPLLISWV 193
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ +P + L G + + + +G F YI F +Y +Y LA I
Sbjct: 194 SFWLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPIL 253
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y +
Sbjct: 254 FLWVYWSWCIVLLGAEITVTLGEYRAERH 282
>gi|154251387|ref|YP_001412211.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
gi|154155337|gb|ABS62554.1| putative ribonuclease BN [Parvibaculum lavamentivorans DS-1]
Length = 459
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 86/256 (33%), Gaps = 2/256 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + I + A + + LL++ P + + G +V V+
Sbjct: 35 RIGWAVIRDLLSGALSLRAMSLVYTTLLAMVPALAIAFAIFRAFGFDSYVEAVLTDFLSP 94
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + V V L T+ Y + + + + N +RV RS
Sbjct: 95 LGDEGTQITLQMMEFVNRVNVNILGTVGFAFLLYTVVSLINKVEAAFNSIWRVEASRSLA 154
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+L + ++++ + + II +
Sbjct: 155 RQFTEIVSMSVLGPL--LVLTVFGIMAGALSNSAIGGLADNWLISYIIEQSSRLVPYAIV 212
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F++ +P + ++ + L G + ++W F ++V + Y +Y+ AS++
Sbjct: 213 IAAFTFIYRMIPNTRVQMDAALVGGLVAGVTWGAAGWTFATFVVKSAQYVAIYSAFASLV 272
Query: 250 TCLVFLYMLGVFFILG 265
+++LY + + G
Sbjct: 273 FFMIWLYAAWIILLGG 288
>gi|161521142|ref|YP_001584569.1| ribonuclease BN [Burkholderia multivorans ATCC 17616]
gi|160345192|gb|ABX18277.1| ribonuclease BN [Burkholderia multivorans ATCC 17616]
Length = 341
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + +MA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 39 AFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 98
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +LN + E R +
Sbjct: 99 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVL 158
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ V + + + V + + A+ ++ + +++ ++ + L
Sbjct: 159 GLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFIGTWLLGDSPYVVVTNVLQLVVGVAVLA 218
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G I + I + G LF Y+ T S + S
Sbjct: 219 GAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 277
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY + +LGAE +A+
Sbjct: 278 LLMWLYFSALVLLLGAEFSAA 298
>gi|289805158|ref|ZP_06535787.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 267
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 45/264 (17%), Positives = 89/264 (33%), Gaps = 10/264 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + +L +I N
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L +I ++ +P + L G + + G F YI F +Y +
Sbjct: 182 RILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGFALYITMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILG 265
Y LA I V++Y +LG
Sbjct: 242 YGVLAVIPILFVWVYWTWCIVLLG 265
>gi|221212501|ref|ZP_03585478.1| ribonuclease BN [Burkholderia multivorans CGD1]
gi|221167600|gb|EEE00070.1| ribonuclease BN [Burkholderia multivorans CGD1]
Length = 336
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + +MA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 39 AFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 98
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +LN + E R +
Sbjct: 99 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVL 158
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ V + + + V + + A+ ++ + +++ ++ + L
Sbjct: 159 GLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFIGTWLLGDSPYVVVTNVLQLVVGVAVLA 218
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G I + I + G LF Y+ T S + S
Sbjct: 219 GAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 277
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY + +LGAE +A+
Sbjct: 278 LLMWLYFSALVLLLGAEFSAA 298
>gi|197121149|ref|YP_002133100.1| ribonuclease BN [Anaeromyxobacter sp. K]
gi|196170998|gb|ACG71971.1| ribonuclease BN [Anaeromyxobacter sp. K]
Length = 439
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 84/267 (31%), Gaps = 14/267 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAW 70
+ A+ E A ++ +L ++ P +V ++ G V D +
Sbjct: 25 LRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFLIQNL 84
Query: 71 PEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I + + + A + + + + ++N + + RS
Sbjct: 85 AVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRSIT 144
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L + L + + LA + + + L
Sbjct: 145 QQAVTYWVGLTLGPLLLAASTTLGAYTQTLLANTG------------VRALVVLSGTLLN 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ +P + K+ + + G + ++W + + + Y +Y +A++
Sbjct: 193 CAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDLAKWGYAFVVARIFKYHAIYGSVAAVP 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L +L++ + GA L +
Sbjct: 253 IFLFWLFVSWTIVLFGARLAYVVQYAR 279
>gi|332188562|ref|ZP_08390281.1| hypothetical protein SUS17_3692 [Sphingomonas sp. S17]
gi|332011406|gb|EGI53492.1| hypothetical protein SUS17_3692 [Sphingomonas sp. S17]
Length = 323
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 107/267 (40%), Gaps = 2/267 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F+++ + G+ A +++ AL+++FPF + A L G ++
Sbjct: 37 FEVLKRTSLGVFND-GFIHAGNLAYLALMTLFPFFITTAALLSLFGQSNETQHAVESFLH 95
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P ++ + I VLA L + L + +E +R +RAY V ++
Sbjct: 96 VLPPDVSDLLRKPIADVLAARTGSLLWLGGLVGLWTVGGFIETIRDIFHRAYGVKATAAF 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ +RL S ++ + V ++ V + A ++ + P ++ + R +
Sbjct: 156 WKSRLSSTLVIVASVVIALLSFLVAGVLTAAEQFIYRLVPFAQDVAGWVGLSRFIPGAVM 215
Query: 189 LFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + P+ + PG +FT WV L + Y Y LA
Sbjct: 216 FGALYMLFYSVTPSKYRESDCPKWPGALFTAAWWVSMTALLPVVLSQLGGYDLTYGSLAG 275
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
++ L+F Y++G+ + GA LNA++
Sbjct: 276 VVVMLLFFYLIGLGLVFGAHLNAALAE 302
>gi|219871529|ref|YP_002475904.1| ribonuclease BN [Haemophilus parasuis SH0165]
gi|288559218|sp|B8F6K4|Y1376_HAEPS RecName: Full=UPF0761 membrane protein HAPS_1376
gi|219691733|gb|ACL32956.1| ribonuclease BN [Haemophilus parasuis SH0165]
Length = 282
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 104/274 (37%), Gaps = 6/274 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I F + + +++ + LLS+ P I+ ++ L + +
Sbjct: 2 KNLIFFFKLFIHRFQQNKIAVYSGYLTYTTLLSLVPLIMVVFSVFTLLPIFEQATAQLKE 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ A + + L++ +K + IS + + + ++ +LN + +
Sbjct: 62 LVYDNFAPSAGDMVQQYLEMFVDNSKKMGIISIIGLVVVAVMLISSIDNALNEIWHNTKK 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS ++ ++ ++ A + + I + + L + +
Sbjct: 122 RSVILSFVVYLAVLIFAPIFAGASIAISSYIFSLEMFSQD------GLFSFSHHLLKFIP 175
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ ++ V+L +P + K G +F + + +G +F YI TF +Y +Y L
Sbjct: 176 FVLTWLLFALVYLIVPNTQVKFRHAAVGALFAGVFFTLGKQIFIWYITTFPSYQAIYGAL 235
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A+I +V++++ +LG + + + K
Sbjct: 236 ATIPIMIVWIHLSWQVVLLGGQFASVLKDMEMIK 269
>gi|329120705|ref|ZP_08249367.1| YihY family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327460502|gb|EGF06838.1| YihY family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 409
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/258 (15%), Positives = 90/258 (34%), Gaps = 10/258 (3%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIA 75
F + +A+ ++ + LL++ P + + + V+ + A
Sbjct: 24 RRFDALEVPQVAASLTFTTLLALVPVLTVALYVLSAFPMYDRLAAAVLHFIDSNLVPQGA 83
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + A L I A S + + + NR ++V +R ++ L+
Sbjct: 84 GAVRGYLATFQSNAAN-LTAIGLAFLALTSLLLIRTIDHTFNRIWQVQNLRPLWMQFLVY 142
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ + A + + + + L + R A + L
Sbjct: 143 WLLLAFAPLAVGAGLAAW--------EILIKDNILSAQNPLSEALRTLAAAAGGTLALFL 194
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +P L G T + + F YI TF++Y+ +Y A+I L++L
Sbjct: 195 LYRLVPNRHVPARHALTGAAATAVLLEMLRRGFAWYIGTFNSYTLIYGAFAAIPVFLLWL 254
Query: 256 YMLGVFFILGAELNASMI 273
++ + GA +S+
Sbjct: 255 NLVWTLLLTGAVFTSSLS 272
>gi|167856267|ref|ZP_02478999.1| ribonuclease BN [Haemophilus parasuis 29755]
gi|167852591|gb|EDS23873.1| ribonuclease BN [Haemophilus parasuis 29755]
Length = 282
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 104/274 (37%), Gaps = 6/274 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I F + + +++ + LLS+ P I+ ++ L + +
Sbjct: 2 KNLIFFFKLFIHRFQQNKIAVYSGYLTYTTLLSLVPLIMVVFSVFTLLPIFEQATAQLKE 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ A + + L++ +K + IS + + + ++ +LN + +
Sbjct: 62 LVYDNFAPSAGDMVQQYLEMFVDNSKKMGIISIIGLVVVAVMLISSIDNALNEIWHNTKK 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS ++ ++ ++ A + + I + + L + +
Sbjct: 122 RSVILSFVVYLAVLIFAPIFAGASIAISSYIFSLEMFSQD------GLFSFSHHLLKFIP 175
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ ++ V+L +P + K G +F + + +G +F YI TF +Y +Y L
Sbjct: 176 FVLTWLLFALVYLIVPNTQVKFRHAAVGALFAGVFFTLGKQIFIWYITTFPSYQAIYGAL 235
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A+I +V++++ +LG + + + K
Sbjct: 236 ATIPIMIVWIHLSWRVVLLGGQFASVLKDMEMIK 269
>gi|114328813|ref|YP_745970.1| ribonuclease BN [Granulibacter bethesdensis CGDNIH1]
gi|114316987|gb|ABI63047.1| ribonuclease BN [Granulibacter bethesdensis CGDNIH1]
Length = 287
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 56/283 (19%), Positives = 119/283 (42%), Gaps = 8/283 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++ ++ + + +A+ + A L++FP + + G L +
Sbjct: 6 RAFWSDWRTVMIGTGRKMIGDQMSLIAAGCAFYATLALFPTMTMLIFVYGLLLDPATIRP 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNR 118
+D + P + + + I ++A P K L + A + SS G++A+ +LN
Sbjct: 66 QLDHLPELLPPGAFELVENRIDWLVAQPRKTLGFGALFSGGFAFWSSSTGIKAMMSALNI 125
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY E RS+ ++I L A + + VA+P L++ G +
Sbjct: 126 AYEEKESRSFLRVQVIGLLMTLAALLAGAVSLAFLVALPAILSFT----GMSGYREYLTR 181
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G I +L L + ++ + P + + G + + +V+ ++L + YI +
Sbjct: 182 TGGIGLLLLFLLFSISLLYRYGPCRRKVTWRWMTAGSVVASLLFVIVSLLVSLYIARLAL 241
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y Y L++++ +++ + + +LGAELN + + KK
Sbjct: 242 YDATYGPLSAVVGTMIWFWSVIYAILLGAELNRVLELRADAKK 284
>gi|94971696|ref|YP_593744.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94553746|gb|ABF43670.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 296
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 97/267 (36%), Gaps = 2/267 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
D + A+ + D +A+A + SA+L++FP ++ A+ I
Sbjct: 2 RDFLDHLRRALWRAFQHDAFAVAKGAAYSAILTLFPAVLVVASTLTLSHTTAAFVREISY 61
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
G E + +A+ + ++ + + AY++ +
Sbjct: 62 AVGRILPEGTASAVQEYFEGEHPIPMKFLITTAILTLWTATGVMISWMEGFRNAYQLQKT 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIY 183
R+++ VL+A + SF+ ++ +LL+ R
Sbjct: 122 WGLIQERMVAISLVLMAGGPMAFASFLVAFGLQIENWMIFHAGRELGMYILLMWSLVRWL 181
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + ++ +LPG + W VLF YI F+ Y +Y
Sbjct: 182 IATVTSIAVIALIYHNGVPRTQPWHRVLPGAVLATAMWFGSTVLFGWYIRNFAHYDVIYG 241
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNA 270
+ + + L++LY++ + ++GAE NA
Sbjct: 242 SVGTAIALLIWLYLISMVVLVGAEFNA 268
>gi|167765672|ref|ZP_02437725.1| hypothetical protein CLOSS21_00160 [Clostridium sp. SS2/1]
gi|167712647|gb|EDS23226.1| hypothetical protein CLOSS21_00160 [Clostridium sp. SS2/1]
gi|291559907|emb|CBL38707.1| Predicted membrane protein [butyrate-producing bacterium SSC/2]
Length = 289
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 66/274 (24%), Positives = 123/274 (44%), Gaps = 2/274 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ +I I+ ++ A ++ + +LS FPF++ +L + +I++
Sbjct: 2 LKLISMIGSVIDKAQKDHVTAFSAQAAFFTILSFFPFMIVLLSLTRYFPI--TPNDMIEL 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V P + + I + +I+ L + +S G+ +L LN + + E
Sbjct: 60 VRTYLPPKYSGMVVPIIRSLNGKLTTTYMSITILTLLWSASKGILSLMTGLNTIHEISEK 119
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++++ R IS Y+ L ++ ++ + + L + +F P L N + R +
Sbjct: 120 RNYFVLRFISSIYIGLFAIAVLFGLILLLFGNSLLIQLYRFEPVLENKHVFFATIRFFLA 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ I ++ FLP+ K ILPG F+ +W V + F+ Y FS +STMY GL
Sbjct: 180 FFTFMVVFIIMYRFLPSENFKTKQILPGAFFSSAAWFVLSFFFSMYFDNFSFFSTMYGGL 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
SI+ L +LY + +GAE+N I +K
Sbjct: 240 TSILLTLFWLYFCMMMLFIGAEINHYFISQSSKK 273
>gi|121634319|ref|YP_974564.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Neisseria meningitidis FAM18]
gi|166199582|sp|A1KSD3|Y462_NEIMF RecName: Full=UPF0761 membrane protein NMC0462
gi|120866025|emb|CAM09763.1| putative ribonuclease BN [Neisseria meningitidis FAM18]
gi|261393105|emb|CAX50702.1| tRNA-processing ribonuclease BN (RNase BN) [Neisseria meningitidis
8013]
Length = 408
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWRGE 278
>gi|51594385|ref|YP_068576.1| ribonuclease BN [Yersinia pseudotuberculosis IP 32953]
gi|153950591|ref|YP_001399031.1| ribonuclease BN [Yersinia pseudotuberculosis IP 31758]
gi|67460656|sp|Q66GF5|Y027_YERPS RecName: Full=UPF0761 membrane protein YPTB0027
gi|166918693|sp|A7FCQ3|Y030_YERP3 RecName: Full=UPF0761 membrane protein YpsIP31758_0030
gi|51587667|emb|CAH19267.1| ribonuclease BN [Yersinia pseudotuberculosis IP 32953]
gi|152962086|gb|ABS49547.1| tRNA-processing ribonuclease BN [Yersinia pseudotuberculosis IP
31758]
Length = 294
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWP 71
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 21 RMLYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFM 80
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 81 PATGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFS 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + A + +I +L ++
Sbjct: 140 FAVYWMVLTLGPILVGASMVISSYLLSL------HWLAHARVDSMIDEILRVFPLLISWV 193
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ +P + L G + + + +G F YI F +Y +Y LA I
Sbjct: 194 SFWLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPIL 253
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y +
Sbjct: 254 FLWVYWSWCIVLLGAEITVTLGEYRAERH 282
>gi|325131677|gb|EGC54382.1| YihY family protein [Neisseria meningitidis M6190]
gi|325137693|gb|EGC60270.1| YihY family protein [Neisseria meningitidis ES14902]
Length = 408
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWRGE 278
>gi|145639810|ref|ZP_01795411.1| ribonuclease BN [Haemophilus influenzae PittII]
gi|145271028|gb|EDK10944.1| ribonuclease BN [Haemophilus influenzae PittII]
Length = 268
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 97/260 (37%), Gaps = 8/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E +A ++ S +L++ P ++ ++ V + +
Sbjct: 10 FWKRFSENKLNQVAGALTYSTMLAIVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 69
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + E + +K + + ++ + + + +LN + + RS + I
Sbjct: 70 ASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFAI 129
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + + I + L + L +
Sbjct: 130 YWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGLK--------LLSFVPFLFTWFIFT 181
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L++
Sbjct: 182 LIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLLW 241
Query: 255 LYMLGVFFILGAELNASMII 274
+ + + ++GA+L +++
Sbjct: 242 IQISWLVVLVGAQLASTLDE 261
>gi|218438917|ref|YP_002377246.1| ribonuclease BN [Cyanothece sp. PCC 7424]
gi|218171645|gb|ACK70378.1| ribonuclease BN [Cyanothece sp. PCC 7424]
Length = 299
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 99/282 (35%), Gaps = 6/282 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
F VF ++ + + ++ +A+ ++ + S+ P +V +AG +G +
Sbjct: 5 RFRTVFRLLKETFGEWQKDRAAQLAAALAYYTVFSLTPLLVITIAIAGSIVGETAARQEI 64
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYR 121
I + I + V KGL IS + +S L+ + N+ ++
Sbjct: 65 IGRLQFVLNNTGTDVIETILNNVSQPEIKGLASLISIIVLLIGASGVFAQLQDAFNQIWK 124
Query: 122 VVEMRS---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V + + ++ V++ + + A + L L
Sbjct: 125 VGDNQPQGGIKELVKKRLLSFVMVFFIGVLLLVSLILSAVLSALTNISYDFLPRLEDFWR 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + ++ ++P + G I + + +++G + Y+ S++
Sbjct: 185 IVNYLLSFTIIAFLFAVLYKYVPDVPVAWKDVRVGSILSTLLFIIGKEILGIYLGR-SSF 243
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S+ Y S++ L ++Y + GAE Y K+
Sbjct: 244 SSAYGAAGSLIVLLAWIYYSAQILLFGAEFTQVYAKRYGSKR 285
>gi|220915850|ref|YP_002491154.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
gi|219953704|gb|ACL64088.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-1]
Length = 439
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 84/267 (31%), Gaps = 14/267 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAW 70
+ A+ E A ++ +L ++ P +V ++ G V D +
Sbjct: 25 LRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFLIQNL 84
Query: 71 PEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I + + + A + + + + ++N + + RS
Sbjct: 85 AVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRSIT 144
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L + L + + LA + + + L
Sbjct: 145 QQAVTYWVGLTLGPLLLAASTTLGAYTQTLLANTG------------VRALVMLSGTLLN 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ +P + K+ + + G + ++W V + + Y +Y +A++
Sbjct: 193 CAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDVAKWGYAFVVARIFKYHAIYGSVAAVP 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L +L++ + GA L +
Sbjct: 253 IFLFWLFVSWTIVLFGARLAYVVQYAR 279
>gi|329569816|gb|EGG51575.1| YihY family protein [Enterococcus faecalis TX1467]
Length = 302
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 131/271 (48%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 15 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + K + I +L + GL ++SALAA +S + AL+ ++N+A+ V + +++
Sbjct: 73 IPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFCSASQSINALQNAMNKAFGVEQRKNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V ++ + + ++ F +++ + T + L
Sbjct: 133 LVRVVSFLVILLFMVAIVGVAVILGLGQYIIELLQHLFHYSTSVIDTFQALKWPLTTVVL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SILPG IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 193 LVIMCLIYAVVPNRKLSLRSILPGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 253 ILMLWLNFAATIIILGAIVNAVVDEYLSGDK 283
>gi|325282751|ref|YP_004255292.1| ribonuclease BN [Deinococcus proteolyticus MRP]
gi|324314560|gb|ADY25675.1| ribonuclease BN [Deinococcus proteolyticus MRP]
Length = 403
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 100/278 (35%), Gaps = 15/278 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-LAGFLGAHQFVPTVIDVVFGA 69
++ +A F +++ +A+ ++ + ++ P ++ L L +++ +
Sbjct: 10 LVREAATSFGKDNAPRLAAALTYFTIFALVPLLILAITFLTSLLADPGVQQRIVEFLSSN 69
Query: 70 WPEVIAKPITDEILQVLAV-----PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ + + I I A+ ++N L+ SLN + V
Sbjct: 70 FGADVGNALQTMIDNQDDKVDLSRGITAGALIGLATLAWGATNLFVQLQASLNELWNVPP 129
Query: 125 MRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ TR VL V +++ + + + + + A +
Sbjct: 130 EATGGFAGQLKTRGKGLLMVLGFGVVMLLFFGLNTYMSAIAQQLGEAWGAG---AFLARL 186
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G + L L ++ LP + + +L G T + + + V+ + Y F+ S
Sbjct: 187 GTLLLGSLLLTGVFAVIYRVLPNVRLQWRDVLVGAAITAVLFSILQVIISWYFANFAPGS 246
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +SI+ L+++Y + GAEL + ++
Sbjct: 247 A-FGAYSSIILLLLWIYYNSMILFFGAELTYAYAKHFG 283
>gi|239916828|ref|YP_002956386.1| YihY family protein [Micrococcus luteus NCTC 2665]
gi|281414712|ref|ZP_06246454.1| YihY family protein [Micrococcus luteus NCTC 2665]
gi|239838035|gb|ACS29832.1| YihY family protein [Micrococcus luteus NCTC 2665]
Length = 360
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 48/284 (16%), Positives = 103/284 (36%), Gaps = 19/284 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGA 69
+ A++ F + G +A+ ++ +LS+ P ++ ++ + A + ++ + G
Sbjct: 33 LTRALKEFGNDGGTDLAAKLTYYLVLSLAPSLLAVFSILSLVLASNRGAIDDLLGQLTGL 92
Query: 70 WPEVIAKPITDEILQVLAVPAKG----LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +T+ + + G I A + +S V+A S N Y E
Sbjct: 93 VPSDYQPLVTNLVTTMSDSADSGGGIVALIIGIATALWSASAYVKAFNRSANTVYGYEEG 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALGNLL 174
R L + L+ V +V + + + L
Sbjct: 153 RGLVKLTLTNLLTTLILIVGIVAVLLSLALNRSLVDGFLQPIAGPLGMTGVVNFLSDTFL 212
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIV 233
+ + ++ L + + ++ P + + PG I + V+ AV + Y
Sbjct: 213 PVWAWVKWPVVVVILLVLIATLYYTTPNVQKPRFHLFGPGNIVALVGMVLAAVALSVYFT 272
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ YS Y + +IM L L++ + +LG E++A +
Sbjct: 273 QFAGYSA-YGAIGTIMALLFALWIFNIVLLLGLEVDAEVERARQ 315
>gi|113460838|ref|YP_718905.1| ribonuclease BN [Haemophilus somnus 129PT]
gi|123327225|sp|Q0I2U0|Y693_HAES1 RecName: Full=UPF0761 membrane protein HS_0693
gi|112822881|gb|ABI24970.1| tRNA-processing RNAse BN [Haemophilus somnus 129PT]
Length = 288
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 102/277 (36%), Gaps = 6/277 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV- 59
M + + F + A +++ S L++ P I+ ++ +
Sbjct: 1 MSNLCRNIKVFFKVFLYRFKQNKLNQAAGYLTYSTTLALVPLIMVFFSVFAAFPVFNEIT 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + + + I Q + +K + + ++ + + ++ +LN
Sbjct: 61 GELKQFIFTNFAPSTGDAVGEYIDQFVNN-SKQMSAVGIISLIVVALMLIHSIDRTLNSI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R + I + + L + + + + Y + L + ++
Sbjct: 120 WLDTSVRPAIFSFAIYWLILTLGPIVIATSIGISTYVTKFATYTFEQDFGLSVGIKLLS- 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ +++ +P K I+ G + + + +G FT YI TF +Y
Sbjct: 179 ---LMPFFLTWFIFTVLYMVVPNKKVSIIHSAAGALIAAVFFTLGKQAFTWYITTFPSYQ 235
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y +A++ L+++ + +LGA+L+A +
Sbjct: 236 LIYGAMATLPIMLLWIQLSWTAVLLGAQLSAVLADIR 272
>gi|309750307|gb|ADO80291.1| tRNA processing exoribonuclease BN [Haemophilus influenzae R2866]
Length = 269
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 97/263 (36%), Gaps = 8/263 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E +A ++ S +L++ P ++ ++ V + +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAMVPLVMVIFSIFSSFPVFNEVTGELKEMIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + E + +K + + ++ + + + +LN + + RS + I
Sbjct: 71 ASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFAI 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + + I + L + L +
Sbjct: 131 YWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGLK--------LLSFVPFLFTWFIFT 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L++
Sbjct: 183 LIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLLW 242
Query: 255 LYMLGVFFILGAELNASMIIYYW 277
+ + + ++GA+L +++
Sbjct: 243 IQISWLVVLVGAQLASTLDEIRE 265
>gi|307246888|ref|ZP_07528953.1| hypothetical protein appser1_20780 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255870|ref|ZP_07537671.1| hypothetical protein appser9_20910 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307260323|ref|ZP_07542030.1| hypothetical protein appser11_21040 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306852173|gb|EFM84413.1| hypothetical protein appser1_20780 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861138|gb|EFM93131.1| hypothetical protein appser9_20910 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865574|gb|EFM97455.1| hypothetical protein appser11_21040 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 274
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 107/270 (39%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I ++ + + A +++ S L++ P ++ ++ Q + +
Sbjct: 6 FIKLLLKRWKIHNIPVSAGYLTYSTTLAIVPLVMVVFSIFTAFPIFQEATEQLKTLIYDN 65
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + +E + + +K + +S + + ++++ +LN+ +R RS +I
Sbjct: 66 FAPNAGDMVEEYIDLFVANSKKMGIVSTIGLVVVALMLIQSIDETLNKMWRNHRKRSIFI 125
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L+ + +A + + I + LL Y L ++
Sbjct: 126 SFLLYTVILFIAPLLAGGSIAISSYIFSMAIFNEN------GLLSFSQQLLQYTPFLLIW 179
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ V+ +P K I+ + G I I + +G F YI TF +Y +Y LA +
Sbjct: 180 LLFTTVYWLVPNTKVNILHAMLGAIVAAIFFTLGKQAFVWYISTFPSYQAIYGALAVLPI 239
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + G + +++ +Y KK
Sbjct: 240 MLLWIHLSWQVVLFGGLITSTLNVYNEMKK 269
>gi|68248882|ref|YP_247994.1| ribonuclease BN [Haemophilus influenzae 86-028NP]
gi|145628607|ref|ZP_01784407.1| ribonuclease BN [Haemophilus influenzae 22.1-21]
gi|81175004|sp|Q4QNR3|Y384_HAEI8 RecName: Full=UPF0761 membrane protein NTHI0384
gi|68057081|gb|AAX87334.1| tRNA processing ribonuclease BN [Haemophilus influenzae 86-028NP]
gi|144979077|gb|EDJ88763.1| ribonuclease BN [Haemophilus influenzae 22.1-21]
Length = 269
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 39/260 (15%), Positives = 97/260 (37%), Gaps = 8/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E +A ++ S +L++ P ++ ++ V + +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAIVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + E + +K + + ++ + + + +LN + + RS + I
Sbjct: 71 ASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFAI 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + + I + L + L +
Sbjct: 131 YWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGLK--------LLSFVPFLFTWFIFT 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K KI G I + +G FT Y+VTF +Y +Y +A++ L++
Sbjct: 183 LIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYVVTFPSYQLIYGAMATLPIMLLW 242
Query: 255 LYMLGVFFILGAELNASMII 274
+ + + ++GA+L +++
Sbjct: 243 IQISWLVVLVGAQLASTLDE 262
>gi|84500374|ref|ZP_00998623.1| ribonuclease BN [Oceanicola batsensis HTCC2597]
gi|84391327|gb|EAQ03659.1| ribonuclease BN [Oceanicola batsensis HTCC2597]
Length = 284
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 113/263 (42%), Gaps = 9/263 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ E++ + +A+ ++ +L++FP + + G L + ++++ P +
Sbjct: 13 IVAAIAEKNLFLIAAGVAFYGMLALFPAMAAIIAIWGLLSDPNVLVEQLELIRNILPVEV 72
Query: 75 AKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I ++I + L + A + + +GV AL + LN +
Sbjct: 73 TRIIENQINALSTASGDKLGWAGLVSMMVAIWSARSGVAALMLGLNAIHGRA-----NRG 127
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L + L+ ++ L+ +S V ++ + + F P +++ R A + L
Sbjct: 128 SLRHYLTALVLTLALLGVSVVTLSAVVIAPIIFAFIPLGPVTAILVEAFRWVAAIFVLMA 187
Query: 192 GLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
GL V+ F P + ++ + PG + W V + F+ Y+ F+ Y+ +Y + + +
Sbjct: 188 GLAVVYRFGPNNRGERMKWVTPGAVMAVALWAVASYGFSLYLANFANYNEVYGSIGAAVA 247
Query: 251 CLVFLYMLGVFFILGAELNASMI 273
L++L++ +LGA +N +
Sbjct: 248 MLMWLFISAFLVLLGAVVNLELR 270
>gi|307286598|ref|ZP_07566690.1| YihY family protein [Enterococcus faecalis TX0109]
gi|306502309|gb|EFM71590.1| YihY family protein [Enterococcus faecalis TX0109]
Length = 302
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 63/271 (23%), Positives = 130/271 (47%), Gaps = 2/271 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I H V + + ++ LLS+FP ++ N+ +L +V+ + A
Sbjct: 15 RFIETTQSHMVTAEIGNSSVVVAYYLLLSLFPLLIAVGNVLPYLRIDP--NSVLPYIAEA 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + K + I +L + GL ++SALAA + +S + AL+ ++N+A+ V + +++
Sbjct: 73 IPKDVYKNLEPAIRSLLTQRSGGLLSVSALAAFWSASQSINALQNAMNKAFGVEQRKNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R++SF +LL V +V + + + ++ F +++ + T + L
Sbjct: 133 LVRVVSFLVILLFMVAIVGVVVILGLGQYIIELLQPIFHYSTSVIDTFQALKWPLTTVVL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ +P K + SIL G IF+ + W++ + +F Y+ FS+ Y + S +
Sbjct: 193 LVIMCLIYAVVPNRKLSLRSILSGAIFSTVGWMLLSQIFGLYVKYFSSRIASYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++L ILGA +NA + Y K
Sbjct: 253 ILMLWLNFAATIIILGAIVNAVVDEYLSGDK 283
>gi|307329030|ref|ZP_07608198.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
gi|306885392|gb|EFN16410.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
Length = 450
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 102/274 (37%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D ++ +E +A+ + LLS+ P ++ L G+ A TV +
Sbjct: 43 WLLLKDTVDSCMEYRVTGLAAEAAFFTLLSLPPLLLGLIGLLGYFDAWTSTDTVATIRQN 102
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + V+ + +I A + S V ++ Y
Sbjct: 103 ILDASATVLSDRGVKEIARPLLDDVIKGGRPDVISIGFAIALWSGSRAVNVFVDTITIMY 162
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL+SF L+A + + + V P A+ L + +
Sbjct: 163 GLEGRRGIVKTRLLSFLLYLVALLVGAVALPLMVIGPEAV------VGLLPSSGDPVRIL 216
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
M+ L ++ +S +PG + WV+G+ L Y+V T
Sbjct: 217 YWPVVMVLSIAFLTTLYHVSVPVRSPWREDIPGALVALAMWVLGSFLLRIYLVHTVEGPT 276
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 277 IYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 310
>gi|186893372|ref|YP_001870484.1| ribonuclease BN [Yersinia pseudotuberculosis PB1/+]
gi|226737464|sp|B2JYL3|Y028_YERPB RecName: Full=UPF0761 membrane protein YPTS_0028
gi|186696398|gb|ACC87027.1| ribonuclease BN [Yersinia pseudotuberculosis PB1/+]
Length = 294
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWP 71
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 21 RMLYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFAEISIKLKAFIFANFI 80
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 81 PATGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKIQRSLVFS 139
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + + + + + A + +I +L ++
Sbjct: 140 FAVYWMVLTLGPILVGASMVISSYLLSL------HWLAHARVDSMIDEILRVFPLLISWV 193
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ +P + L G + + + +G F YI F +Y +Y LA I
Sbjct: 194 SFWLLYSVVPTVRVPARDALIGALVAALLFELGKKGFAMYITLFPSYQLIYGVLAVIPIL 253
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++Y +LGAE+ ++ Y +
Sbjct: 254 FLWVYWSWCIVLLGAEITVTLGEYRAERH 282
>gi|325576968|ref|ZP_08147539.1| tRNA-processing ribonuclease BN [Haemophilus parainfluenzae ATCC
33392]
gi|325160926|gb|EGC73045.1| tRNA-processing ribonuclease BN [Haemophilus parainfluenzae ATCC
33392]
Length = 274
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 92/267 (34%), Gaps = 8/267 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + E A ++ S +L++ P I+ ++ V +
Sbjct: 5 SFLALFWQRSQENKLTQAAGSLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFT 64
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + + + +K + + ++ + + ++ +LN ++ R +
Sbjct: 65 NFAPSASDVVGQYIDEFVRNSKQMSAVGIVSLILVALMLINSIDRTLNGIWQDTSNRPIF 124
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ I + + L + + + L + L+
Sbjct: 125 TSFAIYWLILTLGPLLIGTSIAASSYVKAMFEQSETLSFGLK--------LLSFVPFLST 176
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +++ +P K I G + I + +G FT YI TF +Y +Y +A++
Sbjct: 177 WFIFTLIYMVVPNKKVSIKHSAAGALIAAIFFTLGKQAFTWYIATFPSYQLIYGAMATLP 236
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L+++ + +LGA+L A +
Sbjct: 237 IMLLWIQISWTVVLLGAQLAAVLAEVR 263
>gi|319409902|emb|CBY90226.1| tRNA-processing ribonuclease BN (RNase BN) [Neisseria meningitidis
WUE 2594]
Length = 418
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 24 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 84 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 142
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 143 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 196 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 256 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 288
>gi|290955032|ref|YP_003486214.1| hypothetical protein SCAB_4401 [Streptomyces scabiei 87.22]
gi|260644558|emb|CBG67643.1| putative membrane protein [Streptomyces scabiei 87.22]
Length = 314
Score = 119 bits (299), Expect = 4e-25, Method: Composition-based stats.
Identities = 45/267 (16%), Positives = 98/267 (36%), Gaps = 3/267 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + +D A+ ++ A+L+V P ++ G + + + V
Sbjct: 25 WWPALRRTPVALWRDDVTDYAAALTYYAILAVLPAMLATVLAFGMI-SPDTAEEFVTHVA 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + ++L + A +A + +S+ + R +L+R +RV +
Sbjct: 84 AYAPAGSGADLHAVLARMLGAGSTAWPLLAAGAASALWSASSYLAVFRRALHRMHRVADR 143
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + L L++ S + + + + R
Sbjct: 144 RSPWRKAHRIVLTALAQLGLLLVGSLTLLLSGPLAEALGRTLGLNSTAAWVWGLVRWPVL 203
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + ++ V PA LPG + W+V + F+ Y YS +Y L
Sbjct: 204 LCLVALLVVVVFHTGPAPARHSGRSLPGGVLAAALWLVVSAGFSSYASALGAYSRLYGSL 263
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASM 272
A ++ LV+L++ + + GA+ A +
Sbjct: 264 AGVVVFLVWLWLSNLALLTGAQFAAEL 290
>gi|319653355|ref|ZP_08007455.1| hypothetical protein HMPREF1013_04072 [Bacillus sp. 2_A_57_CT2]
gi|317394839|gb|EFV75577.1| hypothetical protein HMPREF1013_04072 [Bacillus sp. 2_A_57_CT2]
Length = 274
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 58/246 (23%), Positives = 111/246 (45%), Gaps = 3/246 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I + E+D + +A+ ++ LLS+FP ++F L +L +++VV
Sbjct: 8 LIPNLWRRVEEDDVFGLAAQLAYFFLLSLFPLLIFLVTLVPYLPI--TQQDILNVVRDFA 65
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P K I I ++ L + +A + +SNG+ A+ + N+AY V E R + I
Sbjct: 66 PGETMKLIESNIYEI-TQRNGKLLSFGIIATLWSASNGINAVVKAFNKAYDVKETRHFII 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R ++ V+ + V ++ F G L I R + LF
Sbjct: 125 ARGMAILLTFAMIFVFVLALLLPVFGRQIGLFISSEFGLSGQFLAIWNMVRWLVSPFILF 184
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ ++ P K K +S++PG IF WV+ ++ F++Y+ +F +S Y + +I+
Sbjct: 185 VVFTGLYWIAPNKKLKCISVVPGAIFATAGWVLSSLAFSYYVSSFGNFSATYGSIGAIIV 244
Query: 251 CLVFLY 256
+++ Y
Sbjct: 245 LMIWFY 250
>gi|238750777|ref|ZP_04612275.1| tRNA-processing ribonuclease BN [Yersinia rohdei ATCC 43380]
gi|238710921|gb|EEQ03141.1| tRNA-processing ribonuclease BN [Yersinia rohdei ATCC 43380]
Length = 273
Score = 119 bits (298), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 97/267 (36%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 2 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPTFSDISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q + + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVEN-SNRMTVVGTCGLIVTALLLIYSVDSVLNIIWRSKTQRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + + + + A + +I +L ++
Sbjct: 121 VYWMVLTLGPILVGASMVISSYLLSL------QWLANAQVDSMIDELLRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ +P A+ + G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYMVVPTARVPAKDAVIGALVAALFFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRAQRH 261
>gi|329123698|ref|ZP_08252258.1| tRNA-processing ribonuclease BN [Haemophilus aegyptius ATCC 11116]
gi|327469897|gb|EGF15362.1| tRNA-processing ribonuclease BN [Haemophilus aegyptius ATCC 11116]
Length = 269
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 97/260 (37%), Gaps = 8/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E +A ++ S +L++ P ++ ++ V + +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAIVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + E + +K + + ++ + + + +LN + + RS + I
Sbjct: 71 ASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFAI 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + + I + L + L +
Sbjct: 131 YWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGLK--------LLSFVPFLFTWFIFT 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L++
Sbjct: 183 LIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLLW 242
Query: 255 LYMLGVFFILGAELNASMII 274
+ + + ++GA+L +++
Sbjct: 243 IQISWLVVLVGAQLASTLDE 262
>gi|238790759|ref|ZP_04634519.1| tRNA-processing ribonuclease BN [Yersinia frederiksenii ATCC 33641]
gi|238721157|gb|EEQ12837.1| tRNA-processing ribonuclease BN [Yersinia frederiksenii ATCC 33641]
Length = 273
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 96/267 (35%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 2 LYNRIEKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNTIWRSKTPRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + + + + A + +I +L ++
Sbjct: 121 VYWMVLTLGPILVGASMVISSYLLSL------QWLANAQVDSMIDEVLRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + + G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDAIIGALVAALLFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRAQRH 261
>gi|114329060|ref|YP_746217.1| ribonuclease BN [Granulibacter bethesdensis CGDNIH1]
gi|114317234|gb|ABI63294.1| ribonuclease BN [Granulibacter bethesdensis CGDNIH1]
Length = 289
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 46/278 (16%), Positives = 102/278 (36%), Gaps = 4/278 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
+ I+ DA ++ ++ + + I+ + S+ P +V +AG G ++
Sbjct: 2 KRILAILKDAAGGYLADNCLSRGAAIAYYTVFSMSPVLVIVIAVAGTLFGEEAARGAIVS 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ G + A+ + I A + I +S ++ +LN +R
Sbjct: 62 QLGGLMGKQAAEALQAMIASAGRHGAGPIATVIGIGTLLITASGVFGEIQATLNVIWRAE 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-PALGNLLLIIWNGRI 182
RS + L +T+ + V + LA + + + L++
Sbjct: 122 PPRSTVGQLVRVRLLSLGLVMTMGFLLMVSLVASAVLAAIGDWLDSFIPETRLLLQLANA 181
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + + LP + G + T + + VG +L YI + S +T Y
Sbjct: 182 GMSFFIIALIFGATYKILPDRVIAWRDVGMGAVTTALLFSVGKMLIGMYIGS-SNAATSY 240
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ L+++Y F+ GAEL + ++
Sbjct: 241 GAAGALVIMLLWVYYSAQIFLFGAELTRAYSDDRHARR 278
>gi|254674038|emb|CBA09822.1| putative membrane protein [Neisseria meningitidis alpha275]
gi|316985376|gb|EFV64324.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
Length = 418
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 24 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 84 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 142
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 143 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 196 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 256 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 288
>gi|257870278|ref|ZP_05649931.1| ribonuclease BN [Enterococcus gallinarum EG2]
gi|257804442|gb|EEV33264.1| ribonuclease BN [Enterococcus gallinarum EG2]
Length = 307
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 68/266 (25%), Positives = 128/266 (48%), Gaps = 2/266 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I E + + ++ LLS+FP ++ NL FL V+ V
Sbjct: 15 RFIETTQTRITESEMGTTSVVVAYYLLLSLFPLLIAIGNLLPFLSI--APSNVLPYVQEL 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + I I +L + GL +ISALAA + +S + AL+I++N+A+ V + ++
Sbjct: 73 IPGQVYEFIGPAIENLLTSGSGGLLSISALAALWSASQSINALQIAMNKAFGVDQRSNFI 132
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ R +SF +LL + +V ++ V + L +++ F +L+ + T++AL
Sbjct: 133 VVRAVSFVIILLFMIAIVGVTMVIGLGKIILDFLQPIFHIQDDLIATFQTVKWPLTIIAL 192
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+ ++ +P AK K+ S LPG +F W++ + +F Y F+ + Y + S +
Sbjct: 193 LFILMLIYWLVPNAKVKLRSTLPGAVFATAGWMLLSQVFGLYARFFAARISGYQIIGSFI 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
+++L + ILG +NA + Y
Sbjct: 253 VLMIWLNLAATIIILGGIINAVVEEY 278
>gi|238764299|ref|ZP_04625250.1| tRNA-processing ribonuclease BN [Yersinia kristensenii ATCC 33638]
gi|238697450|gb|EEP90216.1| tRNA-processing ribonuclease BN [Yersinia kristensenii ATCC 33638]
Length = 273
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 96/266 (36%), Gaps = 8/266 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ +A H++ +LLS+ P I L + + +F +
Sbjct: 2 LYTRIDKDGLTMLAGHLAYVSLLSLVPLITVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKVHRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + + + + A + +I +L ++
Sbjct: 121 VYWMVLTLGPILVGASMVISSYLLSL------QWLANAQVDSMIDETLRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + + G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDAVIGALIAALLFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRAQR 260
>gi|308388707|gb|ADO31027.1| putative ribonuclease BN [Neisseria meningitidis alpha710]
Length = 416
Score = 119 bits (298), Expect = 5e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 24 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 84 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 142
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 143 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 196 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 256 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 288
>gi|317501494|ref|ZP_07959692.1| hypothetical protein HMPREF1026_01636 [Lachnospiraceae bacterium
8_1_57FAA]
gi|316897123|gb|EFV19196.1| hypothetical protein HMPREF1026_01636 [Lachnospiraceae bacterium
8_1_57FAA]
Length = 294
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 58/283 (20%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + + I+ I A A+ + +LS+ P + + F +
Sbjct: 3 MKKKWEKIKSQIFKVIITINSHHTGAYAAQAAYFFVLSLIPIFLLLLTMVRFTPI--TMS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ V +PE +A I + QV + + ++ + A + + GV ++ LN
Sbjct: 61 EVMTAVLKVFPESVAPMIRSIVSQVYF-QSGTIVPVTIVVALWSAGKGVLSVTSGLNSIC 119
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+E R+++ R+ + Y ++ + +V + V + + P L ++ I
Sbjct: 120 ENMETRNYFYLRIRASFYTVIFLLAIVSSLVLSVFGNRISVMIYEHIPFLSKVVEFIIRI 179
Query: 181 RIYATMLALFIGLIFVHLFLPAAK----SKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + T + L + V+ FLP + + + LPG +FT W++ + F+ Y+ F
Sbjct: 180 RTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLSFFFSVYLDVFK 239
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++MY L +I+ +++LY +LG E+NA + + ++
Sbjct: 240 GFTSMYGSLTTIILIMLWLYGCMYIILLGGEINALLEKFLQKR 282
>gi|304388254|ref|ZP_07370374.1| YihY family protein [Neisseria meningitidis ATCC 13091]
gi|254669987|emb|CBA04685.1| putative membrane protein [Neisseria meningitidis alpha153]
gi|304337781|gb|EFM03930.1| YihY family protein [Neisseria meningitidis ATCC 13091]
Length = 416
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 24 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 84 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 142
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 143 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 196 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 256 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 288
>gi|16272234|ref|NP_438445.1| ribonuclease BN [Haemophilus influenzae Rd KW20]
gi|145632520|ref|ZP_01788254.1| ribonuclease BN [Haemophilus influenzae 3655]
gi|145635184|ref|ZP_01790889.1| ribonuclease BN [Haemophilus influenzae PittAA]
gi|148825444|ref|YP_001290197.1| ribonuclease BN [Haemophilus influenzae PittEE]
gi|148827430|ref|YP_001292183.1| ribonuclease BN [Haemophilus influenzae PittGG]
gi|229844979|ref|ZP_04465116.1| ribonuclease BN [Haemophilus influenzae 6P18H1]
gi|229846364|ref|ZP_04466472.1| ribonuclease BN [Haemophilus influenzae 7P49H1]
gi|260580841|ref|ZP_05848666.1| tRNA-processing ribonuclease BN [Haemophilus influenzae RdAW]
gi|260583351|ref|ZP_05851123.1| tRNA-processing ribonuclease BN [Haemophilus influenzae NT127]
gi|1176326|sp|P44608|Y276_HAEIN RecName: Full=UPF0761 membrane protein HI_0276
gi|166199579|sp|A5UAL3|Y1670_HAEIE RecName: Full=UPF0761 membrane protein CGSHiEE_01670
gi|166199580|sp|A5UG94|Y4180_HAEIG RecName: Full=UPF0761 membrane protein CGSHiGG_04180
gi|1573242|gb|AAC21941.1| ribonuclease BN (rbn) [Haemophilus influenzae Rd KW20]
gi|144986715|gb|EDJ93267.1| ribonuclease BN [Haemophilus influenzae 3655]
gi|145267605|gb|EDK07604.1| ribonuclease BN [Haemophilus influenzae PittAA]
gi|148715604|gb|ABQ97814.1| ribonuclease BN [Haemophilus influenzae PittEE]
gi|148718672|gb|ABQ99799.1| ribonuclease BN [Haemophilus influenzae PittGG]
gi|229810457|gb|EEP46175.1| ribonuclease BN [Haemophilus influenzae 7P49H1]
gi|229812113|gb|EEP47805.1| ribonuclease BN [Haemophilus influenzae 6P18H1]
gi|260092464|gb|EEW76402.1| tRNA-processing ribonuclease BN [Haemophilus influenzae RdAW]
gi|260093585|gb|EEW77501.1| tRNA-processing ribonuclease BN [Haemophilus influenzae NT127]
gi|301168986|emb|CBW28583.1| predicted inner membrane protein [Haemophilus influenzae 10810]
gi|309972563|gb|ADO95764.1| tRNA processing exoribonuclease BN [Haemophilus influenzae R2846]
Length = 269
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 97/260 (37%), Gaps = 8/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E +A ++ S +L++ P ++ ++ V + +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAMVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + E + +K + + ++ + + + +LN + + RS + I
Sbjct: 71 ASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFAI 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + + I + L + L +
Sbjct: 131 YWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGLK--------LLSFVPFLFTWFIFT 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L++
Sbjct: 183 LIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLLW 242
Query: 255 LYMLGVFFILGAELNASMII 274
+ + + ++GA+L +++
Sbjct: 243 IQISWLVVLVGAQLASTLDE 262
>gi|91781294|ref|YP_556501.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|91693954|gb|ABE37151.1| Ribonuclease BN [Burkholderia xenovorans LB400]
Length = 311
Score = 118 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 96/274 (35%), Gaps = 5/274 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAW 70
+ D + F M + I+ + S+ P ++ +AG F G + V G
Sbjct: 23 MMDLAQRFSSHRCTMMGASIAFYSAFSLAPTLLIVLAVAGWFFGKEAARGELFAQVKGIL 82
Query: 71 PEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSW- 128
A + D + G+ +S L +S +L +L+ +
Sbjct: 83 GSDAAAAMQDIVGHAHYAGGSGIAALVSVLLLIVGASATFTSLNTALDVVFEAQTRSGIA 142
Query: 129 -YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L + + L + V + + A+ + ++ + A ++
Sbjct: 143 GMALLLRARLLSFGLVMGLGFLMVVSLVLDAAIQFAGHAVFGNSPVIAFALVLQSIAGLV 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L G + +LP A + L G + I + G LF Y+ T + + S
Sbjct: 203 VLTAGFAALIKWLPDAPVRFRHALVGAFVSAILFTAGHHLFGFYLSHAGTANA-FGAAGS 261
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ +++LY + F+LGAE A++ +P
Sbjct: 262 LAVLMMWLYFSALVFLLGAETTAAIRRRSAAVQP 295
>gi|190151307|ref|YP_001969832.1| tRNA-processing ribonuclease BN (RNase BN) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307264660|ref|ZP_07546240.1| hypothetical protein appser13_20450 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|189916438|gb|ACE62690.1| tRNA-processing ribonuclease BN (RNase BN) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306869972|gb|EFN01736.1| hypothetical protein appser13_20450 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 274
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 45/270 (16%), Positives = 107/270 (39%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I ++ + + A +++ S L++ P ++ ++ Q + +
Sbjct: 6 FIKLLLKRWKIHNIPVSAGYLTYSTTLAIVPLVMVVFSIFTAFPIFQEATEQLKTLIYDN 65
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + +E + + +K + +S + + ++++ +LN+ +R RS +I
Sbjct: 66 FAPNAGDMVEEYIDLFVANSKKMGIVSTIGLVVVALMLIQSIDETLNKMWRNHRKRSIFI 125
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L+ + +A + + I + LL Y L ++
Sbjct: 126 SFLLYAVILFIAPLLAGGSIAISSYIFSMAIFNEN------GLLSFSQQLLQYTPFLLIW 179
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ V+ +P K I+ + G I I + +G F YI TF +Y +Y LA +
Sbjct: 180 LLFTTVYWLVPNTKVNILHAMLGAIVAAIFFTLGKQAFVWYISTFPSYQAIYGALAVLPI 239
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + G + +++ +Y KK
Sbjct: 240 MLLWIHLSWQVVLFGGLITSTLNVYNEMKK 269
>gi|301155259|emb|CBW14724.1| predicted inner membrane protein [Haemophilus parainfluenzae T3T1]
Length = 274
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 92/267 (34%), Gaps = 8/267 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + E A ++ S +L++ P I+ ++ V +
Sbjct: 5 SFLALFWQRSQENKLTQAAGSLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFT 64
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + + + +K + + ++ + + ++ +LN ++ R +
Sbjct: 65 NFAPSASDVVGQYIDEFVYNSKKMSAVGIVSLILVALMLINSIDRTLNGIWKDTSNRPIF 124
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ I + + L + + + L + L+
Sbjct: 125 TSFAIYWLILTLGPLLIGTSIAASSYVKAMFEQSETLSFGLK--------LLSFVPFLST 176
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ +++ +P K I G + I + +G FT YI TF +Y +Y +A++
Sbjct: 177 WFIFTLIYMVVPNKKVSIKHSAAGALIAAIFFTLGKQAFTWYIATFPSYQLIYGAMATLP 236
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L+++ + +LGA+L A +
Sbjct: 237 IMLLWIQISWTVVLLGAQLAAVLAEVR 263
>gi|332703580|ref|ZP_08423668.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
gi|332553729|gb|EGJ50773.1| ribonuclease BN [Desulfovibrio africanus str. Walvis Bay]
Length = 333
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 54/284 (19%), Positives = 119/284 (41%), Gaps = 10/284 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
MR+ + ++ + F +++ + +A+ +S AL S+ P +V + + G+ V
Sbjct: 1 MRKLARELQALLLKTVYGFSDDNCFTLAAALSYYALFSLAPLLVILISALSLVAGSQDVV 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
V + V A I + Q + + I ++ + L+ SLN
Sbjct: 61 NLVYEYVSEYLGSQAATTIRRLMEQAYQPSSSIIASLIGLGTLVVTATTLLANLQNSLNI 120
Query: 119 AYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V + + + + RL S +LL + L++++ V + A Y+ ++ P +
Sbjct: 121 VWGVAQAKKYGVLRMLLDRLNSLVLILLMGLLLLLLTVVQAVMTGAYGYLIQWLP--VDT 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L ++ + + L L + + V LP A+ + G + T + +G +Y+
Sbjct: 179 LALLDILQQVLSFLGLALLIGLVFKVLPDARIVWRDVAVGSLVTALLLFLGKTAIGYYLG 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+T ++MY ++I+ L+++ + LGAE + Y
Sbjct: 239 RSAT-ASMYGPASAIILMLLWINYSSLILFLGAEFTQAWSELYG 281
>gi|192360706|ref|YP_001982745.1| putative ribonuclease [Cellvibrio japonicus Ueda107]
gi|288559229|sp|B3PJS2|Y2282_CELJU RecName: Full=UPF0761 membrane protein CJA_2282
gi|190686871|gb|ACE84549.1| probable ribonuclease [Cellvibrio japonicus Ueda107]
Length = 427
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 95/272 (34%), Gaps = 6/272 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ +Y ++ + + A+ ++ L + P + + + A Q + +
Sbjct: 18 LNWLKGFLYLIVQQYQAKACQKSAASLTYMTLFATVPMMTVTYAMFSIIPAFQHLGDQLQ 77
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ + L+ + A+ L + + + ++ + + N + V +
Sbjct: 78 NLIFTHVLPNNEQDISRYLKNFSAQARQLTWLGGVFLVVSAYLMLKNIEKNFNAIWGVAQ 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R L+ + + L + L + + + V + L ++ Y
Sbjct: 138 GRRGIANFLLYWAILSLGPLLLGVALAMSTYLTSFRLLV-----GSYDSLGVLELVFQYV 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + + + +P K L G + T I++ +F + S+++ +Y
Sbjct: 193 PWLLNWAAFTLLFVAVPNCKVPTRHALVGGLLTTIAFQALKAIFAWIVSH-SSFTLVYGA 251
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++ M + + GA S+ Y
Sbjct: 252 FAALPLFLLWVNMTWMVILGGAVFVHSIKFYQ 283
>gi|262273176|ref|ZP_06050992.1| ribonuclease BN [Grimontia hollisae CIP 101886]
gi|262222754|gb|EEY74063.1| ribonuclease BN [Grimontia hollisae CIP 101886]
Length = 256
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 39/245 (15%), Positives = 82/245 (33%), Gaps = 6/245 (2%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ LLS+ P I + + I + + ++ L A
Sbjct: 1 MAYVTLLSLVPLITVLLSALSLIPGFAEAGDQIRIFVLHNFVPASGDALEQYLNEFVANA 60
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ + + + A+ SLN +RV + R+ ++ I + + L V +
Sbjct: 61 GKMTAVGVAFLFVVALMLISAIDKSLNYIWRVKKKRATVVSFSIYWMVLTLGPVLVGSSL 120
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
V + + L L + + ++ +P + KI
Sbjct: 121 GVSSYLGSLNLMAVEGADMLSP------TLLKRLPFLLTALAFLGLYTLVPNCRVKIGHA 174
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
G I + + F Y F +Y +Y LA + V++Y+ ++GAE+ A
Sbjct: 175 FSGAITAALLFEFSKKGFAFYASNFPSYELIYGALAVVPLLFVWVYLSWCIVLVGAEITA 234
Query: 271 SMIIY 275
++
Sbjct: 235 ALGER 239
>gi|319407820|emb|CBI81473.1| ribonuclease RNAse bn transmembrane protein [Bartonella sp. 1-1C]
Length = 271
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 105/261 (40%), Positives = 164/261 (62%), Gaps = 1/261 (0%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+ ++G A ASH++LS LL+ FPF +FG +LA FLGA + P I+ + P+ IA+P++
Sbjct: 1 MRDNGSAFASHVALSGLLAFFPFFIFGTSLASFLGAFTYTPQKIEALVQLLPDAIAEPLS 60
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
EI+ VL L T+S + AAYF+SNGV ALR +LN+AYRV++ RS + R S +V
Sbjct: 61 KEIITVLTTQRGDLLTLSVIGAAYFASNGVGALRTALNKAYRVIDRRSLFFCRFQSLFFV 120
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
++ +V LV++SF+ V PL + ++ + + + II R ++ LF L+ VH +
Sbjct: 121 IIGTVGLVVISFLLVLAPLLIKIMQNYSSQITEYIGIIRLWRYIIAIVVLFTSLLIVHKW 180
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
LPA + K++ ILPG++ T W + ++ F Y+ F Y++ YAGL SIM ++FLY+L
Sbjct: 181 LPAGQRKVIDILPGILVTIFVWFLTSIAFAQYLTMF-NYASTYAGLTSIMVAIIFLYILS 239
Query: 260 VFFILGAELNASMIIYYWRKK 280
FILG E+NA++I Y +
Sbjct: 240 AIFILGGEINAAIIFYRDHSQ 260
>gi|254804408|ref|YP_003082629.1| putative ribonuclease BN [Neisseria meningitidis alpha14]
gi|254667950|emb|CBA04187.1| putative ribonuclease BN [Neisseria meningitidis alpha14]
Length = 418
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 24 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 84 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 142
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 143 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 196 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 256 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 288
>gi|99081021|ref|YP_613175.1| ribonuclease BN, putative [Ruegeria sp. TM1040]
gi|99037301|gb|ABF63913.1| ribonuclease BN putative [Ruegeria sp. TM1040]
Length = 288
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 90/273 (32%), Positives = 146/273 (53%), Gaps = 4/273 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN----LAGFLGAHQFVPTVIDVV 66
I A+ F ++ W ++SHI++S ++++FPF++F + +A V V+++V
Sbjct: 14 IARRALGRFSRKNAWVLSSHIAMSMMMALFPFVLFTVSLSGAIASLFSHRIVVDDVVNLV 73
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
FG+WP+ +A+PIT E+ VL GL T+ + A YF+SNGV+A+RI++ RAY E R
Sbjct: 74 FGSWPQSVAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEETR 133
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ RLIS G V+L L++ + + +PL +V +FFP L L
Sbjct: 134 PFWKHRLISLGLVILGGAGLLLTAVFELFLPLGARFVGRFFPDLDFLRGWEQGANGLVVA 193
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + HL L + + +LPG + T + W F Y+ +F++YS YAGLA
Sbjct: 194 VIPVAAVFLYHLVLLPKRETLRHVLPGALVTLVLWWASGAGFAFYVSSFASYSATYAGLA 253
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
M L+FLY+ ILGAE+N + +
Sbjct: 254 GAMAALIFLYLNAAILILGAEINGVLQTDRQAR 286
>gi|240117260|ref|ZP_04731322.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae PID1]
gi|268602956|ref|ZP_06137123.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID1]
gi|268587087|gb|EEZ51763.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID1]
Length = 408
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + AT
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LTFMTLLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|145631047|ref|ZP_01786822.1| ribonuclease BN [Haemophilus influenzae R3021]
gi|145637845|ref|ZP_01793492.1| ribonuclease BN [Haemophilus influenzae PittHH]
gi|144983332|gb|EDJ90814.1| ribonuclease BN [Haemophilus influenzae R3021]
gi|145268947|gb|EDK08903.1| ribonuclease BN [Haemophilus influenzae PittHH]
Length = 269
Score = 118 bits (297), Expect = 7e-25, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 97/260 (37%), Gaps = 8/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E +A ++ S +L++ P ++ ++ V + +
Sbjct: 11 FWKRFSENKLNQVAGALTYSTMLAMVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + E + +K + + ++ + + + +LN + + RS + I
Sbjct: 71 ASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFAI 130
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + + I + L + L +
Sbjct: 131 YWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGLK--------LLSFVPFLFTWFIFT 182
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L++
Sbjct: 183 LIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLLW 242
Query: 255 LYMLGVFFILGAELNASMII 274
+ + + ++GA+L +++
Sbjct: 243 IQISWLVVLVGAQLASTLDE 262
>gi|13472171|ref|NP_103738.1| hypothetical protein mll2378 [Mesorhizobium loti MAFF303099]
gi|14022916|dbj|BAB49524.1| mll2378 [Mesorhizobium loti MAFF303099]
Length = 339
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 48/285 (16%), Positives = 102/285 (35%), Gaps = 10/285 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
MR V+ ++ ++I F+ ++ + + ++ A S+ P ++ +AG G
Sbjct: 1 MRPSIRDVWGLVRESIVGFINDNALSHGAAMAFYATTSLAPILLIVVAIAGLVFGHDAAE 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + G A + + + I + +S ++ SLN
Sbjct: 61 LALSAQISGLMGPESADLLKTALQSASSRLSGTWAAAIGIVTLLVAASGVFGEMQQSLNM 120
Query: 119 AYRVVEM----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++V R+ S G V L++ AI + P +L
Sbjct: 121 IWKVEPQGSSLSRLVRARVASLGLVAALGFLLLVSLVASAAISALGNTINAHLPFGTIVL 180
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+I + + + ++ LP + G + T + + +G L YI T
Sbjct: 181 GMINA---VVSFALISVMFAAIYKVLPDRTLAWGDVGLGAVLTALLFTLGKSLIGWYIGT 237
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S ++ Y ++ L+++Y F+LGAE + I + +
Sbjct: 238 -SAVASSYGAAGGLLVILLWVYYTSEIFLLGAEFTRAYSIRHGSR 281
>gi|331088034|ref|ZP_08336955.1| hypothetical protein HMPREF1025_00538 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330408990|gb|EGG88449.1| hypothetical protein HMPREF1025_00538 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 292
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 58/283 (20%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + + I+ I A A+ + +LS+ P + + F +
Sbjct: 1 MKKKWEKIKSQIFKVIITINSHHTGAYAAQAAYFFVLSLIPIFLLLLTMVRFTPI--TMS 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ V +PE +A I + QV + + ++ + A + + GV ++ LN
Sbjct: 59 EVMTAVLKVFPESVAPMIRSIVSQVYF-QSGTIVPVTIVVALWSAGKGVLSVTSGLNSIC 117
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+E R+++ R+ + Y ++ + +V + V + + P L ++ I
Sbjct: 118 ENMETRNYFYLRIRASFYTVIFLLAIVSSLVLSVFGNRISVMIYEHIPFLSKVVEFIIRI 177
Query: 181 RIYATMLALFIGLIFVHLFLPAAK----SKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R + T + L + V+ FLP + + + LPG +FT W++ + F+ Y+ F
Sbjct: 178 RTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLSFFFSVYLDVFK 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++MY L +I+ +++LY +LG E+NA + + ++
Sbjct: 238 GFTSMYGSLTTIILIMLWLYGCMYIILLGGEINALLEKFLQKR 280
>gi|330837175|ref|YP_004411816.1| ribonuclease BN [Spirochaeta coccoides DSM 17374]
gi|329749078|gb|AEC02434.1| ribonuclease BN [Spirochaeta coccoides DSM 17374]
Length = 532
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 102/271 (37%), Gaps = 5/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + MAS + S+L++V P + +GA Q T ++ +
Sbjct: 127 KFLASVWYRINRDQVAIMASGMVYSSLMAVVPLVTVILMFLAPMGAIQPFITFLNDLTVE 186
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ A +L A L ++ + S V + +N+ Y V R+
Sbjct: 187 FFGPEAGAQLLGLLTTFTGNATSLGIFGIISFLFTSILLVNKVWTIINQIYHVALNRNPI 246
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
S ++++ + L + + + +A + G++ + + + + +
Sbjct: 247 RRFTNSISFLIIGILLLGLYISIQPIMTPIIASMNG-----GSVAGFQFFSKDFLQWVIM 301
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ V +P K ++ S G + + + T + T TYS +Y +ASI
Sbjct: 302 FVIFFLVIFTVPNTKVRLSSAALGAGIGAVLFSLTKDGMTWMMGTAVTYSVIYGSIASIF 361
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++Y++ V + E++ + K+
Sbjct: 362 FFLLWMYLMWVIILSAVEISYVHQFHPDGKR 392
>gi|332159658|ref|YP_004296235.1| ribonuclease BN [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325663888|gb|ADZ40532.1| ribonuclease BN [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330860246|emb|CBX70564.1| tRNA-processing ribonuclease BN [Yersinia enterocolitica W22703]
Length = 296
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 97/281 (34%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ ++ +A H++ +LLS+ P + L +
Sbjct: 9 LSASLKPYITFGRMLYTRIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADIS 68
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + I + + Q +A + + + + + ++ LN
Sbjct: 69 IKLKAFIFANFMPATGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNII 127
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R RS + + + + L + + + + + A + +I
Sbjct: 128 WRSKVHRSLVFSFAVYWMVLTLGPILVGASMVISSYLLSL------QWLANARVDSMIDE 181
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L ++ ++ +P + L G + + + +G FT YI F +Y
Sbjct: 182 TLRLFPLLISWVSFWLLYSVVPTVRVPARDALIGALVAALFFELGKKGFTMYITLFPSYQ 241
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y +LGAE+ ++ Y ++
Sbjct: 242 LIYGVLAVIPILFLWVYWSWCIVLLGAEITVTLGEYRAQRH 282
>gi|300710106|ref|YP_003735920.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299123789|gb|ADJ14128.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 442
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 43/253 (16%), Positives = 88/253 (34%), Gaps = 16/253 (6%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+A+ I+ A +S+ P ++F +G +F ++D + I I
Sbjct: 20 ATFLAASIAYYAFVSLIPLLLFTFAAVSAVGGQEFANQILDRTSAFLAPAGQEAIEGAIT 79
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
G ++ + + L + + Y +S + L
Sbjct: 80 G--ETGRGGATIAGSVVLLWSALKLFRGLDTAFSIIYDSGLDKSIVGQIANALIVFLSIL 137
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ +V M + L + I ++AL + + ++ F+P
Sbjct: 138 LAIVGMLVLGTVFALV------------PTIPFIGYVTPLFALIALSVVFLPMYYFMPDV 185
Query: 204 K-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + +PG + + W + +F Y Y Y + I+ L +LY+ GV
Sbjct: 186 EGLTVRDAIPGAVLAGVGWALLQSVFGIYASNAGQYEA-YGVIGGILLLLTWLYIGGVLI 244
Query: 263 ILGAELNASMIIY 275
ILGA LN+ ++
Sbjct: 245 ILGAVLNSVLMNR 257
>gi|218767646|ref|YP_002342158.1| ribonuclease BN/unknown domain fusion protein [Neisseria
meningitidis Z2491]
gi|32699649|sp|Q9JVT9|Y700_NEIMA RecName: Full=UPF0761 membrane protein NMA0700
gi|288559249|sp|A9M1Y8|Y461_NEIM0 RecName: Full=UPF0761 membrane protein NMCC_0461
gi|121051654|emb|CAM07957.1| putative ribonuclease BN [Neisseria meningitidis Z2491]
gi|325127643|gb|EGC50559.1| YihY family protein [Neisseria meningitidis N1568]
gi|325133667|gb|EGC56324.1| YihY family protein [Neisseria meningitidis M13399]
gi|325139742|gb|EGC62276.1| YihY family protein [Neisseria meningitidis CU385]
gi|325143849|gb|EGC66164.1| YihY family protein [Neisseria meningitidis M01-240013]
gi|325197735|gb|ADY93191.1| YihY family protein [Neisseria meningitidis G2136]
gi|325200789|gb|ADY96244.1| YihY family protein [Neisseria meningitidis H44/76]
gi|325206625|gb|ADZ02078.1| YihY family protein [Neisseria meningitidis M04-240196]
Length = 408
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|300770567|ref|ZP_07080446.1| ribonuclease II [Sphingobacterium spiritivorum ATCC 33861]
gi|300763043|gb|EFK59860.1| ribonuclease II [Sphingobacterium spiritivorum ATCC 33861]
Length = 320
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 50/277 (18%), Positives = 101/277 (36%), Gaps = 6/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
F II + F+ ED ++ ++ + S+ P +V +LAG F G V
Sbjct: 13 KDFFSIIKTSAMGFINEDCLKYSASLAYYTIFSIGPILVLIISLAGVFFGQDAIEGKVFT 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ G A+ I + I+ + L +S + +++ ++ S+NR + V
Sbjct: 73 EMKGLVGPSAARQIQEVIMNLKLSGKSNLALVVSIITLLIGATSVFGDIQNSINRIWHVR 132
Query: 124 EMR---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + L+ S+ ++M + V + R + ++
Sbjct: 133 AKPKKGWVKVLKDRLLSSSLVISLGFLLMVTLVVNGVILAFTDRLQRYFPDITVHLLDAI 192
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +FI + LP K + ++ G FT + +V+G + Y+ T T +
Sbjct: 193 NFSISFGVIFILFGIIFRALPDVKIEWRTVRSGAFFTAVLFVIGRFVIGLYLQTSGT-ES 251
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y SI+ L+++Y GA
Sbjct: 252 TYGAAGSIILVLLWVYYTAAILYFGAIYTREYAAIKG 288
>gi|113474045|ref|YP_720106.1| putative ribonuclease BN [Trichodesmium erythraeum IMS101]
gi|110165093|gb|ABG49633.1| putative ribonuclease BN [Trichodesmium erythraeum IMS101]
Length = 371
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 54/301 (17%), Positives = 125/301 (41%), Gaps = 29/301 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVF 67
F I + ++ +++ ++ SA+L++FP ++ G + + ++
Sbjct: 69 FTTIKEVFNCVAKKRLSGLSAEMAYSAMLALFPALLTIIAAIGVFESLSSILFQMGSLLI 128
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EM 125
P + I+ + ++ P K +F+ S + + + S+ + + +L+ ++V +
Sbjct: 129 DIVPNQVQDLISSAVYEIQRSPNKKIFSFSFILSIWLFSSVLSSAMAALDEIHQVPLDKK 188
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL------------ 173
R ++ +L+S G + + L+I S + + L + + + L L
Sbjct: 189 RPFWKAKLVSLGLTIGTLILLIIASGLVLVSDLIVYMISRQSCLLEILPNCPSDQVASCL 248
Query: 174 --------------LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L R T+ + I FV+ F P+ + K I+PG I +
Sbjct: 249 FQKPINNCVLKLRLLETWNQLRWPITLGIVSIAFAFVYRFGPSYRRKGTPIIPGAIIAAL 308
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
W + LF Y+ F Y+ +Y + + + L++LY+ ++G++LN ++ R
Sbjct: 309 MWAAASNLFRLYVFYFGNYNRIYGAIGTFIILLLWLYISSFVVLIGSQLNVTVGEVMARD 368
Query: 280 K 280
+
Sbjct: 369 R 369
>gi|94498872|ref|ZP_01305410.1| Ribonuclease BN [Oceanobacter sp. RED65]
gi|94428504|gb|EAT13476.1| Ribonuclease BN [Oceanobacter sp. RED65]
Length = 393
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 100/273 (36%), Gaps = 7/273 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVID 64
F + I+ F D A+ ++ ++L ++ P I L + +
Sbjct: 2 KPFFRFWWFVIQRFFYNDNRKTAADLTYTSLFALVPLITATYIALTALPIFSEVADDIQG 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F + + +L + A+ L + + + + + L + N+ +RV +
Sbjct: 62 FIFAHFIPSSGAVVEKYLLDF-SQQARKLTAVGLILLFISAISLMHGLEEAFNQIWRV-K 119
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ + + L +++ ++ V + ++ L L+I
Sbjct: 120 TRRIGRRLILYWLVMFLTPISMAVIFLVGSYLMSTSIWIDHVDGLLNINRLLIDALPWLM 179
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+++ L ++ F+P K L G + + +F + + Y +Y
Sbjct: 180 SIMTLTT----IYYFIPTGKVYFWQALLGGVLATAILDLSQWVFVTMVASMPNYKIVYGA 235
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A+I L++L+++ + + AE+ ++
Sbjct: 236 FAAIPLFLIWLFLVWLVILFVAEVIRALPYIRQ 268
>gi|148557661|ref|YP_001265243.1| ribonuclease BN [Sphingomonas wittichii RW1]
gi|148502851|gb|ABQ71105.1| ribonuclease BN [Sphingomonas wittichii RW1]
Length = 307
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 3/271 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + A+ + G+ A +I+ ALL++FPF + A LA G V +
Sbjct: 25 GRIYTVFRRAVLGVYAD-GFIHAGNIAYLALLTMFPFFIVMAALAQLFGRTPDVQHAVYG 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P + + + I VLA L + AL + + +E +R L RAY
Sbjct: 84 FLATVPPSVRQLVAQPISDVLAANNKGALLWLGALVGLWTVGSFIETIRDILYRAYGTRP 143
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-Y 183
+S++ R + ++++ + + V + + + P L +I R+
Sbjct: 144 SKSFWHYRAGAILIIVVSVILAMAAFSAQVVLTGVEQVIWRLLPFADELQPLINLSRLAP 203
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
MLA + +FV L + PG +FT W+ +L + F Y Y
Sbjct: 204 LLMLAGALYAMFVTLTPARYRLSDCPKWPGALFTAGWWMAVTMLLPIVVGAFGGYGRTYG 263
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA ++ L+F +++G+ + GA LNA++
Sbjct: 264 SLAGVIVTLLFFWLVGLGLVFGAHLNAALAE 294
>gi|307251223|ref|ZP_07533144.1| hypothetical protein appser4_19840 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307258055|ref|ZP_07539807.1| hypothetical protein appser10_20350 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307262452|ref|ZP_07544097.1| hypothetical protein appser12_19920 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306856739|gb|EFM88874.1| hypothetical protein appser4_19840 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306863418|gb|EFM95349.1| hypothetical protein appser10_20350 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306867829|gb|EFM99660.1| hypothetical protein appser12_19920 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 274
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 108/270 (40%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I ++H+ + A +++ S L++ P ++ ++ Q + +
Sbjct: 6 FIKLLLKHWKIHNIPVSAGYLTYSTTLAIVPLVMVVFSIFTAFPIFQEATEQLKTLIYDN 65
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + +E + + +K + +S + + ++++ +LN+ +R RS +I
Sbjct: 66 FAPNAGDMVEEYIDLFVANSKKMGIVSTIGLVVVALMLIQSIDETLNKMWRNHRKRSIFI 125
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L+ + +A + + I + LL Y L ++
Sbjct: 126 SFLLYAVILFIAPLLAGGSIAISSYIFSMAIFNEN------GLLSFSQQLLQYTPFLLIW 179
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ V+ +P K I+ + G I I + +G F YI TF +Y +Y LA +
Sbjct: 180 LLFTTVYWLVPNTKVNILHAMLGAIVAAIFFTLGKQAFVWYISTFPSYQAIYGALAVLPI 239
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + G + +++ +Y KK
Sbjct: 240 MLLWIHLSWQVVLFGGLITSTLNVYNEMKK 269
>gi|311744221|ref|ZP_07718025.1| ribonuclease BN family integral membrane protein [Aeromicrobium
marinum DSM 15272]
gi|311312394|gb|EFQ82307.1| ribonuclease BN family integral membrane protein [Aeromicrobium
marinum DSM 15272]
Length = 325
Score = 118 bits (296), Expect = 8e-25, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 110/281 (39%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------- 53
+ + + +I V++ +A+ I+L ++S+ I+ GF+
Sbjct: 20 LPRPWQRAWTLIGRTGREAVDDRVPGLAAEIALFTMISLPALILVVLGSLGFVADALGPA 79
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
GA + V ++ G + + + + +VLA + +I AL + + S
Sbjct: 80 GAQELNRIVFELPRGFFSDRVYASYENLATRVLADGRADVISIGALLSLWTGSRATNRAL 139
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
++ AY + R + RL++ G + + + + + V P + ++ A L
Sbjct: 140 ETITIAYDIDRPRPGWRRRLLALGLTVAGLLAAIAILPLLVLGPRVVEWLAPEAVASATL 199
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ L L ++ ++ LPG I W++ A Y+
Sbjct: 200 -TVLGALYWPVLGLLAITALASLYHLGVPWRTPWRRDLPGAALAMIVWLLAAAGLRAYLA 258
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+++ LA + +++LY+ V +LGAELNA +
Sbjct: 259 ATIGSDAVFSQLAVPIAIVLWLYVSSVAVLLGAELNAEIER 299
>gi|332686297|ref|YP_004456071.1| ribonuclease BN [Melissococcus plutonius ATCC 35311]
gi|332370306|dbj|BAK21262.1| ribonuclease BN [Melissococcus plutonius ATCC 35311]
Length = 304
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 64/275 (23%), Positives = 128/275 (46%), Gaps = 2/275 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I ++ + + ++ LLS+FP ++ NL +L + V+
Sbjct: 11 KNLLRFIRTTQRRMIDSEIGNTSVIVAYYLLLSLFPLLIAIGNLLPYLNINP--NHVLPY 68
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE I + L +L + GL ++SAL A + +S + AL+I++N+AY V
Sbjct: 69 LAEIVPESIYHDLEPAFLSLLTRRSGGLLSVSALTALWSASQSINALQIAMNKAYGVKSR 128
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+++ I R++S +LL + LV + + L +++ + ++ + T
Sbjct: 129 KNFIIVRIVSLTVILLLLLALVGVVIILGLGKNILDFLQPILKVPTSFIVTFQTLKWPVT 188
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L I + + L +P AK I S++PG +F+ I W++ + +F YI F++ Y +
Sbjct: 189 LFVLLIIMCLIFLVVPNAKLTIRSVIPGAVFSTIGWMLLSQVFGIYIKYFNSKVAGYQII 248
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S + +++L I G +NA + Y K+
Sbjct: 249 GSFIVLILWLNFAATIIIFGGIINAVVEEYSSEKR 283
>gi|260461418|ref|ZP_05809666.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
gi|259032955|gb|EEW34218.1| ribonuclease BN [Mesorhizobium opportunistum WSM2075]
Length = 342
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 49/278 (17%), Positives = 106/278 (38%), Gaps = 10/278 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
+ ++ +++ +V ++ + + I+ A S+ P ++ +AG +G +
Sbjct: 16 WLLLKESVSGYVNDNALSHGAAIAFYAATSLAPIVLIVVAIAGIVVGNDAAQLALSAEFA 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM- 125
G A + I + L I +A +S +++SLN+ ++V
Sbjct: 76 GVMGPQSADLLKATIETASHRGSSTLATLIGLMALLVTASGVFGEMQLSLNQIWKVRPNG 135
Query: 126 ---RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R S G V L++ AI A + + P ++ I
Sbjct: 136 VSLSRLVRARAASLGLVAALGFMLLVSLAASTAISALGAVINQHLPFGELIVSAINTI-- 193
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + + ++ LP K + G + T + + +G L YI T S +T Y
Sbjct: 194 -VSFVLIALLFSAIYKVLPDRTLKWRDVAVGSLVTALLFTIGKSLIGWYIGT-SAIATSY 251
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++M L+++Y F+ GAE+ + + ++
Sbjct: 252 GAAGALMVVLLWVYYSAQIFLFGAEITRAYSVLSGSRQ 289
>gi|302523065|ref|ZP_07275407.1| ribonuclease BN family membrane protein [Streptomyces sp. SPB78]
gi|302431960|gb|EFL03776.1| ribonuclease BN family membrane protein [Streptomyces sp. SPB78]
Length = 305
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 100/276 (36%), Gaps = 3/276 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M Y + + +D A+ ++ A+L++ P ++ +A L
Sbjct: 8 MLRYAADWWPALRRTPLSLWNDDVTDDAAALTYYAMLALLPALLVTV-VASALLGPDTAR 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
T+I + P + D + ++L A L +A + + + + R SL+R
Sbjct: 67 TLIAYLTDYAPGQAGPQLHDLLTRMLTENATAWPLIATGVFSAFWSACSYLAVFRRSLHR 126
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+R + R+ L LV+ + + V + + + + L
Sbjct: 127 MHRTTDARTPVKRAHRIVLTALALLGLLVLTALLLVLSNPVVDAIGRALHLDEGVALAWR 186
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R A + + P + LPG + + W++ FT Y TY
Sbjct: 187 VLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPGGVLATVLWLLATAGFTLYTSLIGTY 246
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
S +Y LA + L++L++ + + GA+ A +
Sbjct: 247 SALYGSLAGSVVFLIWLWLSNLALLTGAQFAAELGK 282
>gi|116696508|ref|YP_842084.1| ribonuclease BN [Ralstonia eutropha H16]
gi|113531007|emb|CAJ97354.1| Ribonuclease BN [Ralstonia eutropha H16]
Length = 357
Score = 118 bits (296), Expect = 9e-25, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 98/277 (35%), Gaps = 7/277 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDV 65
++ AI + + + +S L S+ P +V ++AG F GA +
Sbjct: 70 RTLRVVAAAINSWFAHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAEAARGEIFSQ 129
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVE 124
+ G E A I + + G+ + A +++ L+ SL+ + V
Sbjct: 130 LEGLVGEQGATAIQEILAATHRAGGSGMAALVATGILLVGATSAFAELKSSLDDIWHVPV 189
Query: 125 MRSWYITRLISF----GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +L+ ++L ++++S + A + + +
Sbjct: 190 PETAGWQQLLRTRLLSFSLVLVLAFMLLVSLIVNAALAVVERLWGQLWTQSWFAPVADVL 249
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + LP A+ + G + T + + +G L Y+ S ++
Sbjct: 250 STAFSFAVVTALFAVIFKMLPNARIAWRDVTMGAVITALLFSIGKRLIGLYLGN-SAVAS 308
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S++ ++++Y F GAEL + +
Sbjct: 309 SYGAAGSVVALMLWVYYSAQIFFFGAELTRQYALQFG 345
>gi|15676431|ref|NP_273569.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Neisseria meningitidis MC58]
gi|32699650|sp|Q9K0R0|Y524_NEIMB RecName: Full=UPF0761 membrane protein NMB0524
gi|7225749|gb|AAF40954.1| putative ribonuclease BN [Neisseria meningitidis MC58]
Length = 406
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|240080023|ref|ZP_04724566.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae FA19]
gi|268596167|ref|ZP_06130334.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae FA19]
gi|268549955|gb|EEZ44974.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae FA19]
Length = 408
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + A
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAR 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|323138225|ref|ZP_08073297.1| ribonuclease BN [Methylocystis sp. ATCC 49242]
gi|322396477|gb|EFX99006.1| ribonuclease BN [Methylocystis sp. ATCC 49242]
Length = 281
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 108/269 (40%), Positives = 154/269 (57%), Gaps = 2/269 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ YDA F +DGWA+ASHI+LS L ++FPF++F LAGF G + ++
Sbjct: 2 FLLRPFYDAYLKFERDDGWAIASHIALSTLTALFPFLIFITALAGFFGRQEVADAAAKII 61
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F AWP IA P++ E+ VL P G+ TI A+ YF+S+GVEALR++LNRAY + R
Sbjct: 62 FEAWPPRIAGPLSAEVQSVLTEPRHGMATIGAVLGIYFASSGVEALRVALNRAYDARDQR 121
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-GNLLLIIWNGRIYAT 185
W+ RL + +V + + +L+ + F+ V PLA A + PAL L + R T
Sbjct: 122 PWWWLRLEAIVFVFIGAASLLAIGFLLVLAPLARAIATQHAPALMHELEPLYAPVRYGVT 181
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAG 244
+ + L+ H+FLPA + + I+PG T ++ + LF Y+ F +Y + YAG
Sbjct: 182 TAVVSVALLAAHVFLPAGQRPLARIVPGFALTLLASLACGALFGAYLAEFAGSYVSTYAG 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
LASIM LVFLY L V FI GAELN +
Sbjct: 242 LASIMMALVFLYSLAVIFIYGAELNQVIA 270
>gi|239918346|ref|YP_002957904.1| YihY family protein [Micrococcus luteus NCTC 2665]
gi|281415456|ref|ZP_06247198.1| YihY family protein [Micrococcus luteus NCTC 2665]
gi|239839553|gb|ACS31350.1| YihY family protein [Micrococcus luteus NCTC 2665]
Length = 393
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 98/273 (35%), Gaps = 4/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVV 66
+ ++ + +E W +A+ ++ LS+ P +V ++ LG + V +
Sbjct: 21 LLYVLRRTLHRLLELQVWDVAAAMTFFGALSLLPTVVALLSVVSLLGVEEETVDAAAHLA 80
Query: 67 FGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
WP + + + IL + + P G + A+ +S V A +++R + E
Sbjct: 81 AEIWPSLTPDVVREWILTLGSAGPGTGAVVLGAVGTVVSASGAVGAFHRAMHRIHDTREG 140
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + RL+ F L + V+++ + V + + + +
Sbjct: 141 RPFLHFRLVVFVETLALMLGAVLITILVVVGGDLSLRLGQAVGLPEETVQTWNVVKWPVI 200
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + + P + + G + + V F ++ +
Sbjct: 201 LVVIALIVTLAYRLGPNVRQPRYRPLSLGAVAVVVLLFGATVALGWITDRFGQFAVV-GR 259
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ S + L ++ + + GA +A ++
Sbjct: 260 INSAIGVLALAWVACIVLLAGAAFDAEVLRARQ 292
>gi|53729034|ref|ZP_00134316.2| COG1295: Predicted membrane protein [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209408|ref|YP_001054633.1| ribonuclease BN [Actinobacillus pleuropneumoniae L20]
gi|165977396|ref|YP_001652989.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
gi|303250333|ref|ZP_07336532.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|303251726|ref|ZP_07337897.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|307249026|ref|ZP_07531034.1| hypothetical protein appser2_19870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307253642|ref|ZP_07535509.1| hypothetical protein appser6_21320 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|288559227|sp|A3N3P2|Y1950_ACTP2 RecName: Full=UPF0761 membrane protein APL_1950
gi|126098200|gb|ABN75028.1| tRNA-processing ribonuclease BN (RNase BN) [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165877497|gb|ABY70545.1| tRNA-processing ribonuclease BN [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302649156|gb|EFL79341.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 2 str.
4226]
gi|302650803|gb|EFL80960.1| ribonuclease BN [Actinobacillus pleuropneumoniae serovar 6 str.
Femo]
gi|306854484|gb|EFM86679.1| hypothetical protein appser2_19870 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306858878|gb|EFM90924.1| hypothetical protein appser6_21320 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 276
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 108/270 (40%), Gaps = 6/270 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I ++H+ + A +++ S L++ P ++ ++ Q + +
Sbjct: 8 FIKLLLKHWKIHNIPVSAGYLTYSTTLAIVPLVMVVFSIFTAFPIFQEATEQLKTLIYDN 67
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + +E + + +K + +S + + ++++ +LN+ +R RS +I
Sbjct: 68 FAPNAGDMVEEYIDLFVANSKKMGIVSTIGLVVVALMLIQSIDETLNKMWRNHRKRSIFI 127
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L+ + +A + + I + LL Y L ++
Sbjct: 128 SFLLYAVILFIAPLLAGGSIAISSYIFSMAIFNEN------GLLSFSQQLLQYTPFLLIW 181
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ V+ +P K I+ + G I I + +G F YI TF +Y +Y LA +
Sbjct: 182 LLFTTVYWLVPNTKVNILHAMLGAIVAAIFFTLGKQAFVWYISTFPSYQAIYGALAVLPI 241
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++++ + G + +++ +Y KK
Sbjct: 242 MLLWIHLSWQVVLFGGLITSTLNVYNEMKK 271
>gi|294056392|ref|YP_003550050.1| ribonuclease BN [Coraliomargarita akajimensis DSM 45221]
gi|293615725|gb|ADE55880.1| ribonuclease BN [Coraliomargarita akajimensis DSM 45221]
Length = 493
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 102/291 (35%), Gaps = 20/291 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R + I+ + A+ ++ +++ + P I F L+GF+
Sbjct: 46 IRARVYHLLRILTLTWQGLRRNMIPVQAAALTFYSMIGIGPLIAFAIMLSGFVIQKGNEE 105
Query: 61 TVIDVV------------------FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA 102
+I+ + E+ + + A + + I AL A
Sbjct: 106 LIIEGIAKAIAFAAPQIALDTDGPENGITELNPQILELITSFSQAAQSGTVGAIGALMLA 165
Query: 103 YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
+ + ++ S N + V + R ++ + +V L +V + + + + + A
Sbjct: 166 FIGLQVLSSIESSFNSLWGVEQGRRVSERIVVYWTFVSLGAV--LGSAALTMDMAAATRA 223
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
P GNL +I + L L + L F P + G +
Sbjct: 224 YLGELPLGGNLANLILLISPLLSYLLLVVLLAVFFRFFPNTTVEWKPAFIGAGMVVLLLH 283
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
V +L Y+ +++Y + I+ ++ LY+ + +LG ++ ++
Sbjct: 284 VYKLLSFLYVRRVVDTNSLYGSVGIIIVLMLGLYVFWLLILLGGQVTYALQ 334
>gi|325129662|gb|EGC52477.1| YihY family protein [Neisseria meningitidis OX99.30304]
gi|325141745|gb|EGC64198.1| YihY family protein [Neisseria meningitidis 961-5945]
gi|325202688|gb|ADY98142.1| YihY family protein [Neisseria meningitidis M01-240149]
gi|325207566|gb|ADZ03018.1| YihY family protein [Neisseria meningitidis NZ-05/33]
Length = 408
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|291522420|emb|CBK80713.1| Predicted membrane protein [Coprococcus catus GD/7]
Length = 282
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 2/262 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + ++ E+ A AS + +LS FPF +F L + +++++
Sbjct: 4 ILRWVKGFLKKNTEDHLGAYASQAAFFIVLSAFPFCIFLLTLLRYSPL--TYEDLLNILQ 61
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P++ I + +V + + + + + + G+ ++ +N Y + E R+
Sbjct: 62 MLSPKMANDVIRLVMKEVYEQSTIAITSFTIIFVLWSAGRGILSITRGINEIYHINETRN 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ R IS Y L +V L++ + V + V K P L + + R+
Sbjct: 122 YFYIRFISAVYTLWLAVALIVTLGLLVFGNVFYRKVIKLLPVLHEFAAFVISIRMLIIFG 181
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + IFV+ LP K+ ++ +LPG I I W++ + +F Y ++ MY LA
Sbjct: 182 LLTMFFIFVYKVLPNKKTPLLYVLPGAISCSIGWMITSSIFAIYFNYSHSFIYMYGSLAG 241
Query: 248 IMTCLVFLYMLGVFFILGAELN 269
IM +++LY LGAELN
Sbjct: 242 IMMIMLWLYTCMYQLFLGAELN 263
>gi|293397675|ref|ZP_06641881.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae F62]
gi|291611621|gb|EFF40690.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae F62]
Length = 408
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + AT
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LTFMTLLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|318603752|emb|CBY25250.1| ribonuclease BN [Yersinia enterocolitica subsp. palearctica Y11]
Length = 275
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 96/267 (35%), Gaps = 8/267 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ +A H++ +LLS+ P + L + + +F +
Sbjct: 2 LYTRIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNIIWRSKVHRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + + + + A + +I +L ++
Sbjct: 121 VYWMVLTLGPILVGASMVISSYLLSL------QWLANARVDSMIDETLRLFPLLISWVSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + L G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDALIGALVAALFFELGKKGFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y ++
Sbjct: 235 WVYWSWCIVLLGAEITVTLGEYRAQRH 261
>gi|171914030|ref|ZP_02929500.1| hypothetical protein VspiD_22665 [Verrucomicrobium spinosum DSM
4136]
Length = 319
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 98/277 (35%), Gaps = 11/277 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVV 66
++ A ++++D +++ ++ A S P ++ +LA F G ++ +
Sbjct: 6 FLSLLRTAAREWIDDDASRLSAALAYYATFSTAPLLIICISLASFVFGEQAARGQIVAEI 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
E I IL G + + ++ L+ +LN + VV
Sbjct: 66 SSLAGEDAGHSIQAFILDASQNDHNGWKALLGVAVLLFGATRVFAELKGALNAIWGVVPR 125
Query: 126 R-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + +SF VL+ L+ V A+ A Y ++ P LL G
Sbjct: 126 PGQQVLTLLRDQFLSFSMVLVIGFLLLSSLLVSTAVAAATRYFGQWVPMHPELLGWGDMG 185
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ + + + LP + G + T + +G + Y+ T S+
Sbjct: 186 ---LSLVVISVLFALILKLLPDVHVGWGDVWLGAVVTAGLFNIGKHAISVYLGTTGVASS 242
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y SI+ L+++Y GAE +
Sbjct: 243 -YGAAGSIVVLLLWVYYSSCILFYGAEFTKCYARKFG 278
>gi|325135887|gb|EGC58499.1| YihY family protein [Neisseria meningitidis M0579]
gi|325203614|gb|ADY99067.1| YihY family protein [Neisseria meningitidis M01-240355]
Length = 406
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 96/273 (35%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVVRRFDEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYI-NAFREQANRLTAIGSMMLVVTSLMLIRTIDNTFNRIWRVNSQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + R AT
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDAALASGAPQWSGALRTAAT 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LTFMTLLLWGLYRFVPNRFVPARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|262089775|gb|ACY24868.1| tRNA-processing RNAse [uncultured organism]
Length = 423
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 30/274 (10%), Positives = 93/274 (33%), Gaps = 6/274 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + + + + + + A+ ++ L + P + + + A Q +
Sbjct: 13 KKYRWLVGFFWLMVHQYQAKSCQKSAASLTYVTLFATVPMMTVTFAMFSIIPAFQNLGEQ 72
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + ++ + L+ + A+ L L + ++ + + N + V
Sbjct: 73 LQSLMFQHFLPNSEQDLGKYLKDFSAQARNLTAFGLLFLLVSAYLMLKDIEQNFNGIWGV 132
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R L+ + + L + L + + V + L +
Sbjct: 133 PRGRRGVANFLLYWAILSLGPLLLGAALGISTYLASFRLLV-----GTYDSLGVFEWVFQ 187
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A + + + + +P K + + G +FT + + F + S+++ +Y
Sbjct: 188 LAPWVLTWAAFTLLFVAVPNCKVSVRHAMIGGLFTTLGFQGLKAAFGWIVGH-SSFTLVY 246
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A++ L+++ ++ + GA ++ +
Sbjct: 247 GAFAALPLFLLWVNLIWTVILGGAVFVHTIGAHQ 280
>gi|289704650|ref|ZP_06501078.1| YihY family protein [Micrococcus luteus SK58]
gi|289558604|gb|EFD51867.1| YihY family protein [Micrococcus luteus SK58]
Length = 375
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 97/273 (35%), Gaps = 4/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVV 66
+ ++ + E W +A+ ++ LS+ P ++ ++ LG + V +
Sbjct: 3 LLYVLRRTLHRLFELQVWDVAAAMTFFGALSLLPTVIALLSVVSLLGVEEETVDAAAHLA 62
Query: 67 FGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
WP + + + IL + + P G + A+ +S V A +++R + E
Sbjct: 63 AEIWPSLTPDVVREWILTLGSAGPGTGAVVLGAVGTVVSASGAVGAFHRAMHRIHDTREG 122
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + RL+ F L + V+++ + V + + + +
Sbjct: 123 RPFLHFRLVVFVETLALMLGAVLITILVVVGGDLSQRLGQAVGLPEETVQTWNVVKWPVI 182
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + + P + + G + + V F ++ +
Sbjct: 183 LVVIALIVTLAYRLGPNVRQPRYRPLSLGAVAVVVLLFGATVALGWITDRFGQFAVV-GR 241
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ S + L ++ + + GA +A ++
Sbjct: 242 INSAIGVLALAWVACIVLLAGAAFDAEVLRARQ 274
>gi|119487571|ref|ZP_01621181.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
gi|119455740|gb|EAW36876.1| Ribonuclease BN [Lyngbya sp. PCC 8106]
Length = 420
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 120/306 (39%), Gaps = 29/306 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTV 62
+ I + I E+ +++ ++ +++L +FP ++ + + +
Sbjct: 104 FLYINWTTIKQVAIRTAEQRLNGLSAEMAYNSILGLFPALLAIIAAISLSNSLQNTLQEM 163
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+V P+ + I ++L ++ +F+ S L + + S + + ++LN +RV
Sbjct: 164 ATLVAVVVPQEVQVQIASVWERMLLNNSEEIFSFSFLVSIWLFSAVIGSAMVALNHIHRV 223
Query: 123 VEMR--SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF-------------- 166
+ R ++ +LI+ + + + L+I + + + + +
Sbjct: 224 PKDRLRPFWEAKLIAIALAVGSILLLIIACGLVFISDIVVEILARQSCILETVGTCPLDQ 283
Query: 167 ------------FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV 214
+ L R + + ++ F P+ + ++PG
Sbjct: 284 IKDCLEQPPVQQCLLVKTLPSTWKQLRWPIALGIVATNFALIYRFGPSKRQPETPLVPGA 343
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
I ISW V + LF Y+ F Y+ Y + + + L++LY+ + ++GA++N ++
Sbjct: 344 ILAAISWAVISNLFRLYVTHFGNYNLTYGAIGAFIILLLWLYISSLVMLIGAQVNVTVGE 403
Query: 275 YYWRKK 280
+K
Sbjct: 404 AMRLRK 409
>gi|189352680|ref|YP_001948307.1| BN-like family ribonuclease [Burkholderia multivorans ATCC 17616]
gi|189336702|dbj|BAG45771.1| BN-like family ribonuclease [Burkholderia multivorans ATCC 17616]
Length = 325
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + +MA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +LN + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVL 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ V + + + V + + A+ ++ + +++ ++ + L
Sbjct: 143 GLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFIGTWLLGDSPYVVVTNVLQLVVGVAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G I + I + G LF Y+ T S + S
Sbjct: 203 GAFSALLKFLPDARVAWRDAAVGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY + +LGAE +A+
Sbjct: 262 LLMWLYFSALVLLLGAEFSAA 282
>gi|319775853|ref|YP_004138341.1| trna-processing ribonuclease [Haemophilus influenzae F3047]
gi|319896611|ref|YP_004134804.1| tRNA-processing ribonuclease [Haemophilus influenzae F3031]
gi|317432113|emb|CBY80464.1| trna-processing ribonuclease [Haemophilus influenzae F3031]
gi|317450444|emb|CBY86660.1| trna-processing ribonuclease [Haemophilus influenzae F3047]
Length = 275
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/260 (15%), Positives = 97/260 (37%), Gaps = 8/260 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F E +A ++ S +L++ P ++ ++ V + +
Sbjct: 17 FWKRFSENKLNQVAGALTYSTMLAIVPLVMVIFSIFSAFPVFNEVTGELKEMIFTNFAPS 76
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + E + +K + + ++ + + + +LN + + RS + I
Sbjct: 77 ASDMVGEYIDQFVSNSKKMSAVGIVSLIAVALMLINNIDRTLNSIWHNSQSRSPLSSFAI 136
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L + + + + I + L + L +
Sbjct: 137 YWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGLK--------LLSFVPFLFTWFIFT 188
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ +P K KI G I + +G FT YIVTF +Y +Y +A++ L++
Sbjct: 189 LIYTVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGAMATLPIMLLW 248
Query: 255 LYMLGVFFILGAELNASMII 274
+ + + ++GA+L +++
Sbjct: 249 IQISWLVVLVGAQLASTLDE 268
>gi|86140856|ref|ZP_01059415.1| hypothetical protein MED217_16930 [Leeuwenhoekiella blandensis
MED217]
gi|85832798|gb|EAQ51247.1| hypothetical protein MED217_16930 [Leeuwenhoekiella blandensis
MED217]
Length = 334
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 108/277 (38%), Gaps = 5/277 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDV 65
+F + + + D +A ++ I+ L S+ ++ ++A F+G + D
Sbjct: 14 RLFIFLKNTYLAWDRNDPFAKSAIIAYYTLFSLPSLLMIVTSIASAFVGPEAVQGRIHDE 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ +A I I +V + IS A Y ++ ++ ++N + V E
Sbjct: 74 IARFISPEVAIAIEQMIGKVTVENDNWITLIISIAALIYGATGVFFQMKKTMNTIWNVTE 133
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW--NGRI 182
+S + LI+ + L M V I + L + + + +++ R
Sbjct: 134 KKSNFKRMLINRAIAFGMVLVLGFMLLVAFVITVLLNLLTDYLSQFAPSITVVFADALRF 193
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L + + LP K + + G T I +++G + +Y + S +++Y
Sbjct: 194 LISFLFIASLFAAIFKILPDVKMGYKTTVLGASITAILFLIGESILGYYFAS-SNPASVY 252
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
G ASI+ L+++ + GAE+ I K
Sbjct: 253 GGAASIVLILLWVNYTCLILFFGAEITVQYAIAKKHK 289
>gi|327403349|ref|YP_004344187.1| ribonuclease BN [Fluviicola taffensis DSM 16823]
gi|327318857|gb|AEA43349.1| ribonuclease BN [Fluviicola taffensis DSM 16823]
Length = 308
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 102/285 (35%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVP 60
+ +F ++ I + + ++ D + ++ + A+ S+ +V +AG G
Sbjct: 7 KTFFRSLWTITKNTAKDWIAADPFRQSAVVGYYAVFSIPALLVIIIAVAGLVFGEEAVQG 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRA 119
+ + A A+ I I +V + I + S+ L+ SLN+
Sbjct: 67 QISGQIKSALGTETAESIESIIAKVSEEKTSIIAAIIGFVTLIVGSTGVFTELQTSLNQI 126
Query: 120 YRVV-----EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V + TRL S G VL ++I + + ++ P
Sbjct: 127 WEVQVVAKKKWLKTIKTRLFSLGLVLSLGFLMLISLLLTTGLEAFSEMIKTHLPDFMPF- 185
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ + + + + LP AK + + G + T + +++G Y
Sbjct: 186 -VLKTANFILSFAVITVLFALIFKILPDAKIQFRDVWIGAMVTTLLFILGKFGLGIYFAK 244
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++ Y S++ ++++ + GAE ++ +
Sbjct: 245 -ANPASAYGAAGSVVLIMLWVSYSCMILFFGAEFTKQYATFHGHE 288
>gi|240013444|ref|ZP_04720357.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae DGI18]
gi|240112233|ref|ZP_04726723.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae MS11]
gi|240120515|ref|ZP_04733477.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae PID24-1]
gi|268598292|ref|ZP_06132459.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae MS11]
gi|268582423|gb|EEZ47099.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae MS11]
Length = 408
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + A
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAR 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|123440434|ref|YP_001004428.1| ribonuclease BN [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|166199589|sp|A1JHU3|Y031_YERE8 RecName: Full=UPF0761 membrane protein YE0031
gi|122087395|emb|CAL10176.1| ribonuclease BN [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 296
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 97/281 (34%), Gaps = 8/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ ++ +A H++ +LLS+ P + L +
Sbjct: 9 LSASLKPYITFGRMLYTRIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADIS 68
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F + I + + Q +A + + + + + ++ LN
Sbjct: 69 IKLKAFIFTNFMPATGDIIQNYLEQFVAN-SNRMTVVGTCGLIVTALLLIYSVDSVLNII 127
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+R RS + + + + L + + + + + A + +I
Sbjct: 128 WRSKVHRSLVFSFAVYWMVLTLGPILVGASMVISSYLLSL------QWLANARVDSMIDE 181
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+L ++ ++ +P + L G + + + +G FT YI F +Y
Sbjct: 182 TLRLFPLLISWVSFWLLYSVVPTVRVPAQDALIGALVAALFFELGKKGFTMYITLFPSYQ 241
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA I +++Y +LGAE+ ++ Y ++
Sbjct: 242 LIYGVLAVIPILFLWVYWSWCIVLLGAEITVTLGEYRAQRH 282
>gi|240127522|ref|ZP_04740183.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae SK-93-1035]
gi|268685898|ref|ZP_06152760.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae SK-93-1035]
gi|268626182|gb|EEZ58582.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae SK-93-1035]
Length = 408
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + A
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAR 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|332289613|ref|YP_004420465.1| ribonuclease BN [Gallibacterium anatis UMN179]
gi|330432509|gb|AEC17568.1| ribonuclease BN [Gallibacterium anatis UMN179]
Length = 309
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 107/285 (37%), Gaps = 12/285 (4%)
Query: 1 MREYFCIVFDIIYDAIE----HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH 56
M+++ + + I+ F + A +++ S L++ P ++
Sbjct: 1 MQKFLQHLIQHLIILIKVFSYKFNQNKLSQAAGYLTYSTTLAIVPLLMVIFAFFAAFPVF 60
Query: 57 -QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
V +F + ++ + I V K + IS + + ++++ +
Sbjct: 61 NDVVQDFQQFIFSNFAPSVSHTVEQYIT-VFIANTKKMSGISIIGLIIVALMLIKSIDTT 119
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
LN + + RS + I + + L + + V + + + K L
Sbjct: 120 LNDIWSNSKKRSTLYSFSIYWMILTLGPIFIATSIGVSSYLFSSSIFTYK------TGLP 173
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ L ++ ++ +P K + G + I + +G FT Y+ +F
Sbjct: 174 FGLKLLSFVPFLLSWLAFTCIYAIVPNTKVNVKHAACGALIAAIFFTLGKACFTWYMKSF 233
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +Y LA++ ++++++ F +LGA+L A + KK
Sbjct: 234 PSYQLIYGALATLPIMILWIHLSWTFILLGAQLTAVLDDLDKMKK 278
>gi|194336683|ref|YP_002018477.1| ribonuclease BN [Pelodictyon phaeoclathratiforme BU-1]
gi|288559222|sp|B4SAH4|Y1623_PELPB RecName: Full=UPF0761 membrane protein Ppha_1623
gi|194309160|gb|ACF43860.1| ribonuclease BN [Pelodictyon phaeoclathratiforme BU-1]
Length = 428
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 90/259 (34%), Gaps = 9/259 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
I ++F+ + + A ++ LLS+ P + ++ F ++ D +
Sbjct: 27 FIPFFWKNFIHDRIFLGAGSLAFQTLLSIVPILAVILSILNVFVVFTPFKRSLEDFLVQN 86
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + A + + + + + + +LN + V R
Sbjct: 87 FMPGAGNVLNHYLTDFIGKTA-SVPILGGVFLFIIALFLISTVDHTLNEIWEVHAPRKAL 145
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L V + A +YV G LL + + +
Sbjct: 146 QGFTLYWTVLTLGPVLIGSSLA-------ASSYVWYMVFTDGPLLELKTRLLSFFPFINS 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+++ +P + + + G + + + + FT YI +T+ +Y L+ I
Sbjct: 199 VAAFFLLYMLVPNRRVRFVHAFSGALLAALLFELSKRWFTFYITHIATFEHIYGALSVIP 258
Query: 250 TCLVFLYMLGVFFILGAEL 268
++Y+ + + GAE
Sbjct: 259 MLFFWVYLGWIVVLTGAEF 277
>gi|307243532|ref|ZP_07525680.1| YihY family protein [Peptostreptococcus stomatis DSM 17678]
gi|306493088|gb|EFM65093.1| YihY family protein [Peptostreptococcus stomatis DSM 17678]
Length = 283
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 106/259 (40%), Gaps = 1/259 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F D ++ ++ ++ LS+FP ++F ++ V + P
Sbjct: 11 VKALVNQFNIADMYSRSAGVAYYLTLSIFPSLMFLMCAFAYMP-PIIGNFVETAIRTNVP 69
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + + + L I+ L A + S V++L N AY E RS+
Sbjct: 70 TGASNILLTIVDSAINNRSIRLLVITFLIAVWTFSKAVKSLIAGQNSAYNFEETRSFIRL 129
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L + Y + + ++ V +R L LI R + + +
Sbjct: 130 NLYVYLYAVAFFLAVIFAVVFLVYGGKFADIIRDRLDEFYLLTLIYNFIRFVIPIFFILL 189
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ +F P KI LPG FT + WV+ ++ ++ YI FS Y +Y +++I+
Sbjct: 190 MFLNFFIFGPCKPIKIRQALPGACFTTVLWVILSIAYSFYIDKFSDYKEIYGNISTIIVL 249
Query: 252 LVFLYMLGVFFILGAELNA 270
+ ++Y+ + +G ++NA
Sbjct: 250 MTWIYLCSISITIGYKVNA 268
>gi|149190617|ref|ZP_01868885.1| ribonuclease BN [Vibrio shilonii AK1]
gi|148835500|gb|EDL52469.1| ribonuclease BN [Vibrio shilonii AK1]
Length = 315
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 91/267 (34%), Gaps = 8/267 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVF 67
+ + + A +++ LLS+ P + ++ V+ +
Sbjct: 21 LNFSRYLAQRMSHDRINVNAGYLAYITLLSIVPLLTVLLSVLSSFPVFSNTGEVLQDFII 80
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + +++ ++ + I + + + + +LN +RV R
Sbjct: 81 QHFVPAAGDAVYSALVEFVSN-TGKMTAIGSAFLFIAALMLISNIDKNLNYIWRVRVKRR 139
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + + + L + + + A +L + +
Sbjct: 140 MVFSFSMYWMILTLGPILIGASIVGTSYVTSLKALEHNVVSGAFSLFIAW------LPAI 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F I +++ +P K + G I + + + F +YI F +Y +Y LA+
Sbjct: 194 MAFFAFIGLYMLVPNKKVHFSHAVVGSIVATLLFEISKKGFAYYITQFPSYQLIYGALAA 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
I +++Y+ ++GAE A+M
Sbjct: 254 IPILFLWIYLCWFIVLIGAEFTAAMGE 280
>gi|86157125|ref|YP_463910.1| ribonuclease BN [Anaeromyxobacter dehalogenans 2CP-C]
gi|85773636|gb|ABC80473.1| tRNA-processing RNAse BN [Anaeromyxobacter dehalogenans 2CP-C]
Length = 429
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 84/267 (31%), Gaps = 14/267 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAW 70
+ A+ E A ++ +L ++ P +V ++ G V D +
Sbjct: 15 LRLALRVVEGETVRLRAMALTYISLFALVPALVVAFSVVQAFTGMDAISSRVHDFLIQNL 74
Query: 71 PEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I + + + A + + + + ++N + + RS
Sbjct: 75 AVGARSSIEPYLDRFIRNAHATSAGVVGGALLVWSAVTLFTNVDHAVNDVWGIRRRRSVT 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L + L + + LA + + + L
Sbjct: 135 QQAVTYWVGLTLGPILLAASTTLGAYTQTLLANTG------------VRALVVLSGTLLN 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
++ +P + K+ + + G + ++W V + + Y +Y +A++
Sbjct: 183 CAFFATLYQIVPNTRVKLRAAVVGGVAAGVAWDVAKWGYAFVVARIFKYHAIYGSVAAVP 242
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L +L++ + GA L +
Sbjct: 243 IFLFWLFVSWTIVLFGARLAYVVQYAR 269
>gi|319639500|ref|ZP_07994249.1| tRNA-processing ribonuclease BN [Neisseria mucosa C102]
gi|317399266|gb|EFV79938.1| tRNA-processing ribonuclease BN [Neisseria mucosa C102]
Length = 400
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 95/269 (35%), Gaps = 16/269 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
+ + F +E +A+ ++ + LL++ P + +A Q+ + +
Sbjct: 18 FAWFVVRRFDDERVPQVAASMTFTTLLALVPVLTVMVVIASAFPVFDQWSGEFVSFINRT 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D I A L I ++ S + + + NR +RV R W
Sbjct: 78 IVPQGADMVFDYINAFRD-KATKLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNSQRPWM 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + + ++L + V + + R+ + +
Sbjct: 137 MQFLVYWALLTFGPLSLGVGLSVVIGQVQLVGGSE--------------WLRVITAVSFI 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ F+P L G T LF Y+ F Y ++Y A++
Sbjct: 183 TVLLWGLYRFVPNRFVPASHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAAVP 242
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++L +L + GA L +S+ +
Sbjct: 243 FFLLWLNLLWTLVLGGAVLTSSLSYWRGE 271
>gi|240122814|ref|ZP_04735770.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae PID332]
gi|268681428|ref|ZP_06148290.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID332]
gi|268621712|gb|EEZ54112.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID332]
Length = 408
Score = 117 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 94/273 (34%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + N +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNHIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + A
Sbjct: 133 RPWMMQFLVYWALLTSGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAR 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|254422463|ref|ZP_05036181.1| YihY family protein [Synechococcus sp. PCC 7335]
gi|196189952|gb|EDX84916.1| YihY family protein [Synechococcus sp. PCC 7335]
Length = 341
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 95/278 (34%), Gaps = 11/278 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDV 65
I++ ++ + + + +A+ ++ ++ P ++ +A FL V +++
Sbjct: 5 ILWSLLKQTVAEWQRDKVSRLAAALAYYTTFALAPILIIAIAIASFLFEQSAVQSRILEQ 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ E A I + + IS +S L+ +LN + VV
Sbjct: 65 IQSLLGENAAGLIEEMLTSRSTSDGGFWATIISVGLLILGASGLFVQLQDALNTVWNVVA 124
Query: 125 M-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
RL+SFG V+ L++ V + + P I+
Sbjct: 125 RKDEGIWGLVRDRLLSFGMVVAIGFLLMVSLIVSAGLSAVSGMFGELLPGWDLAWQILNT 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + V+ LP + + G T + +G L YI S+ +
Sbjct: 185 A---FSFGVITLLFAMVYKVLPDVRIAWSDVWTGAAITAFLFTIGKALIGLYIGN-SSVA 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ Y S + L+++Y + GAE +
Sbjct: 241 SAYGAAGSFVVLLLWIYYSSQILLFGAEFTQVYANRFG 278
>gi|300714623|ref|YP_003739426.1| tRNA-processing ribonuclease BN [Erwinia billingiae Eb661]
gi|299060459|emb|CAX57566.1| tRNA-processing ribonuclease BN [Erwinia billingiae Eb661]
Length = 290
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 96/275 (34%), Gaps = 6/275 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + E E+ +A +++ +LLS+ P + L + V
Sbjct: 8 RHRLRAFWGWLKLLWERIDEDAMTTLAGNLAYVSLLSLVPLVAVVFALFAAFPSFANVSV 67
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + L+ + + A + + ++ +LN +R
Sbjct: 68 QLKAFIFNNFVPSSGTVIQSYLEQFVANVNKMTAVGACGLVVTALLLMYSIDTALNTIWR 127
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + + ++ + +I G
Sbjct: 128 SKRKRPIVYSFAVYWMILTLGPLLAGASLAISSYLLSL------RWASVTGVSWLIDYGL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L ++ ++ +P + L G + + + +G F Y+ F +Y +
Sbjct: 182 RIFPLLLSWLSFWLLYSIVPTRQVAGKDALIGALVAGLLFELGKKGFALYVTMFPSYQLI 241
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y LA I +++Y +LGAE++A++ Y
Sbjct: 242 YGVLAVIPILFLWVYWTWCIVLLGAEISATLGDYR 276
>gi|302346602|ref|YP_003814900.1| YihY family protein [Prevotella melaninogenica ATCC 25845]
gi|302151070|gb|ADK97331.1| YihY family protein [Prevotella melaninogenica ATCC 25845]
Length = 448
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 101/267 (37%), Gaps = 3/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R F Y ++ F D A + +S S ++++ P +A G QF+
Sbjct: 27 RNMLIRQFQKFYLTVKFFFVRDHAASTAQLSFSTIMAIVPIASMIFAIANGFGFGQFLEK 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A PE + ++ I + Y + + + + + ++
Sbjct: 87 QFREMLSAQPEAATWLLKLTQSYLVHAKTGLFIGIGLMIMLYSVFSLIRTVETTFDNIWQ 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R + + L ++++I+S + + ++V + ++ R
Sbjct: 147 VKDSRPLSRIVIDYTALMFLVPISIIILSGLSIY---FYSFVENLNGLRFLGTIASFSLR 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + I +++F+P AK KI + + I+ + ++ H + ++Y+ +
Sbjct: 204 YLVPWAILTLMFIVLYVFMPNAKVKITKTIGPAMIASIAMLCLQAVYIHGQIFLTSYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ ++++ + AEL
Sbjct: 264 YGSFAALPLFMLWILASWYICLFCAEL 290
>gi|56479497|ref|YP_161086.1| hypothetical protein ebA7158 [Aromatoleum aromaticum EbN1]
gi|81356111|sp|Q5NXM9|Y4060_AZOSE RecName: Full=UPF0761 membrane protein AZOSEA40600
gi|56315540|emb|CAI10185.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
Length = 407
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 93/272 (34%), Gaps = 7/272 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFG 68
+ + F+ +A ++ + LL++ P + L A ++ +
Sbjct: 9 EFMRLLTGRFLATRCPQVAGSLAFTTLLAIVPLLTVIIALFSNFPAFSRLGESLRTFLLE 68
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A I + A GL I + + + + N + V R
Sbjct: 69 NLLPDRAGQIIATYAFQFSQQAAGLTLIGTVLLVLTALMLLMTIDHVFNHIWGVRRPRPL 128
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ + + L + L + + + +
Sbjct: 129 LTRLMVHWFALTLGPLALGGSVLATGHLVATSIALAG------EGSWVGATFARLVPTVL 182
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L ++ +P +++ L G I I +V+ LF +IV TY+ +Y A +
Sbjct: 183 LGSLFSVLYYAVPNHPVRMLHALAGGIAAAIVFVLMQRLFGLFIVRIPTYTLIYGTFAVL 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LV+LY+ V +LGA L+A++ ++ R +
Sbjct: 243 PIFLVWLYLSWVVILLGAALSATLPSFFERAR 274
>gi|240015883|ref|ZP_04722423.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae FA6140]
gi|240125009|ref|ZP_04737895.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae SK-92-679]
gi|254493038|ref|ZP_05106209.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae 1291]
gi|268683595|ref|ZP_06150457.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae SK-92-679]
gi|226512078|gb|EEH61423.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae 1291]
gi|268623879|gb|EEZ56279.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae SK-92-679]
Length = 408
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + A
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAR 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|295133960|ref|YP_003584636.1| ribonuclease BN [Zunongwangia profunda SM-A87]
gi|294981975|gb|ADF52440.1| ribonuclease BN [Zunongwangia profunda SM-A87]
Length = 310
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 58/257 (22%), Positives = 116/257 (45%), Gaps = 5/257 (1%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV----IDVVFGAWPEVIAKPITD 80
AS I+ S +++FPF++F NL ++ + + + P + ++D
Sbjct: 52 STRASAIAFSFFMALFPFLLFIFNLIPYVEETNLIDDFRIKFLLFIDTLLPPETQEYVSD 111
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ P GL + S L + + +NGV A+ +Y RS + +I+ G L
Sbjct: 112 IFADIANNPRGGLLSFSFLLSIFLMTNGVNAIFTGFEFSYHTNIKRSLFRQYIIAIGVSL 171
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L+I + V + A+ + ++ + N + +A +L ++I + ++ F
Sbjct: 172 VLAFLLLITVILMVYLTYAVEDLSEY-GLIANDGSGANVVKYFAFVLLIYIAVATLYYFG 230
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
K G FT I ++ + LF YI FS Y+ +Y + +++ +V++++
Sbjct: 231 TKEARKARFFSVGAFFTTILIMLTSFLFGLYIENFSNYNELYGSIGALLILMVYIWLNAN 290
Query: 261 FFILGAELNASMIIYYW 277
+LG ELNAS+I
Sbjct: 291 ILLLGFELNASLIKLKK 307
>gi|240114976|ref|ZP_04729038.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae PID18]
gi|268600644|ref|ZP_06134811.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID18]
gi|268584775|gb|EEZ49451.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae PID18]
Length = 408
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + A
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAR 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|91779327|ref|YP_554535.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|91691987|gb|ABE35185.1| Ribonuclease BN [Burkholderia xenovorans LB400]
Length = 411
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 100/257 (38%), Gaps = 5/257 (1%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
MA+ I+ A S+ P +V +AG+ GA + D + G + A + +
Sbjct: 1 MAASIAFYAAFSLAPTLVMVIAVAGWVFGAEAARGELFDHIHGLLGDQAAAGVQTIVENA 60
Query: 86 LAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV-LLA 142
+ G IS A +S +L +LN + RS + L+ +
Sbjct: 61 HHSGSAGGIAAIISFSMLAIGASATFSSLNSALNIVWPYTGPRSSSVIALVRVRLISFGL 120
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + + V + + + +V K+ ++I ++ +L L + FLP
Sbjct: 121 VLGVAFLLIVSLVLDTIITFVGKWLWGDSPYVVIGNLLQLGVGLLVLACAFAGLLKFLPD 180
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
A+ + + G I + + G LF YI S+ + S+ L++LY
Sbjct: 181 ARVRWLDAFVGGIVAAVLFSAGKKLFALYIAHAGMASS-FGAAGSLAVLLMWLYFSAAVL 239
Query: 263 ILGAELNASMIIYYWRK 279
+LGAE +A+ + +
Sbjct: 240 LLGAEFSAARGRIHDPR 256
>gi|25027579|ref|NP_737633.1| hypothetical protein CE1023 [Corynebacterium efficiens YS-314]
gi|259507015|ref|ZP_05749915.1| membrane protein [Corynebacterium efficiens YS-314]
gi|23492861|dbj|BAC17833.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165293|gb|EEW49847.1| membrane protein [Corynebacterium efficiens YS-314]
Length = 408
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 100/287 (34%), Gaps = 18/287 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVID 64
I + F E W + + ++ ++LSV P ++ +L + G + + +
Sbjct: 40 WRHAIKRVAKEFFIERLWDLGALLTYFSVLSVAPGLLVAYSLVTLVLASGPLEVLDQARE 99
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRV 122
+ E + + + V + GL + + A + SS V A N Y
Sbjct: 100 FITRHVAEDQQQIVLSVVDAVAGSASAGLVGLIVGIVVALWTSSAYVRAFSRCANTVYGR 159
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-----------ALG 171
E R L+ L + + + + + +
Sbjct: 160 AEGRFLLKHWLMMVLMNLSLLMGVAAILISLLINETTVMRLFGPIAEPLGLTDVLTYLSE 219
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTH 230
L + R A +L L + ++ P K + + G +F + ++
Sbjct: 220 TFLPVWNWVRWPAILLILMGLVALLYHLAPNVKPHRFKWLSAGSVFAILGILLAGWGLNI 279
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y TF+ +++ Y + S+M V +++L + ILG +++A +
Sbjct: 280 YFTTFAAFNS-YGAVGSVMALFVGMWILNIVLILGIKIDAEVSRARQ 325
>gi|91215702|ref|ZP_01252672.1| hypothetical protein P700755_02257 [Psychroflexus torquis ATCC
700755]
gi|91186168|gb|EAS72541.1| hypothetical protein P700755_02257 [Psychroflexus torquis ATCC
700755]
Length = 307
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 119/274 (43%), Gaps = 2/274 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVV 66
++D++ I ++ A I+ S +++FPF++F NL F+ F +++
Sbjct: 35 LYDLLSLYISGIIKGTFSTRAGSIAFSFFMAIFPFLLFVLNLIPFVWFIDDFQQELLNYF 94
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D + P GL + + + + SNGV A+ +Y R
Sbjct: 95 EELLPPQTSGLFQDIFFDIANNPRAGLLSFVFVLSIFLMSNGVNAIFTGFEFSYHTKINR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + + G ++ ++ L+I V + +G+ L++ GR +
Sbjct: 155 TIIRQYIAAVGVAIIVAILLLIAVIATVYFSFVIDQFTS-IGVVGDSLVLARYGRFAILI 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L +G+ ++ F K + PG FT I V+ LF+ Y+ FS Y+ +Y +
Sbjct: 214 IVLILGISILYYFGTREGRKTRFLSPGSFFTTILIVLTTYLFSIYVENFSAYNKLYGSIG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++++++ +LG ELN ++ + K
Sbjct: 274 ALLILMLYIWLNSNILLLGFELNGALYNLKRKSK 307
>gi|227539060|ref|ZP_03969109.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
gi|227241116|gb|EEI91131.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
Length = 320
Score = 117 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 101/279 (36%), Gaps = 6/279 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
F II + F+ ED ++ ++ + S+ P +V +LAG F G V
Sbjct: 11 IVKDFFSIIKTSAMGFINEDCLKYSASLAYYTIFSIGPILVLIISLAGVFFGQDAIEGKV 70
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYR 121
+ G A+ I + I+ + L +S + +++ ++ S+NR +
Sbjct: 71 FTEMKGLVGPSAARQIQEVIMNLKLSGKSNLALVVSIITLLIGATSVFGDIQNSINRIWH 130
Query: 122 VVEMRSWYITRL---ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V ++ L+ S+ ++M + V + R + ++
Sbjct: 131 VRAKPKKGWVKVIKDRLLSSSLVISLGFLLMVTLVVNGVILAFTDRLQRYFPDITVHLLD 190
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ +FI + LP K + ++ G FT I +V+G + Y+ T T
Sbjct: 191 AINFSISFGVIFILFGIIFRALPDVKIEWRTVRSGAFFTAILFVIGRFVIGLYLQTSGT- 249
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ Y SI+ L+++Y GA
Sbjct: 250 ESTYGAAGSIILVLLWVYYTAAILYFGAIYTREYAAIKG 288
>gi|225077190|ref|ZP_03720389.1| hypothetical protein NEIFLAOT_02245 [Neisseria flavescens
NRL30031/H210]
gi|224951481|gb|EEG32690.1| hypothetical protein NEIFLAOT_02245 [Neisseria flavescens
NRL30031/H210]
Length = 400
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 95/269 (35%), Gaps = 16/269 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
+ + F EE +A+ ++ + LL++ P + +A Q+ I +
Sbjct: 18 FAWFVVRRFNEERVPQVAASMTFTTLLALVPVLTVMVAIASAFPVFDQWSGEFISFINRT 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D I A L I ++ S + + + NR +RV R W
Sbjct: 78 IVPQGADMVFDYINAFRD-KATNLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNSQRPWM 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + + ++L + V + + R T+ +
Sbjct: 137 MQFLVYWALLTFGPLSLGVGLSVVIGQVQVVGGSE--------------WLRGITTVSFI 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ F+P L G T LF Y+ F Y ++Y A++
Sbjct: 183 TVLLWGLYRFVPNRFVPANHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAAVP 242
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++L +L + GA L +S+ +
Sbjct: 243 FFLLWLNLLWTLVLGGAVLTSSLSYWRGE 271
>gi|111225044|ref|YP_715838.1| hypothetical protein FRAAL5685 [Frankia alni ACN14a]
gi|111152576|emb|CAJ64318.1| Conserved hypothetical protein; putative membrane protein [Frankia
alni ACN14a]
Length = 453
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 104/287 (36%), Gaps = 9/287 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + + +A+ LLS+ P ++ G++
Sbjct: 78 RRVPRGPLRLARTTLANAWRHRVLGLAAEAGFWQLLSLPPLLLSLLGALGYVADAIGGDA 137
Query: 62 VIDVVFGAWPEV--------IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
+ + + + + ++L+ + +I + + + S +
Sbjct: 138 LSSIRDSILRGAGDLLTESVVDDAVRPTVDEILSRGRPDVISIGFVLSLWTGSTAMATFV 197
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
++ AY + RS +RL++ G L + VI+ + P ++ + ++
Sbjct: 198 NTITIAYGQRDRRSAVRSRLVALGLFLAQVTSGVIILPALILGPGLISRILDADQHP-SV 256
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ L L ++ + LPG + W+VG+ + Y+
Sbjct: 257 DHLLTLLFWPVVGLVALTMLTSLYHLSLPVRRPWWRALPGATLALVCWLVGSDVLRLYLE 316
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ +Y L + + L+F Y+ + +LGAELNA++ +++
Sbjct: 317 IVFSHELVYGSLGAPVAALLFFYITALAVLLGAELNAALDEQSSQRR 363
>gi|59800586|ref|YP_207298.1| fused ribonuclease BN/uncharacterized domain-containing protein
[Neisseria gonorrhoeae FA 1090]
gi|194097757|ref|YP_002000798.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae NCCP11945]
gi|239998260|ref|ZP_04718184.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae 35/02]
gi|260441209|ref|ZP_05795025.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae DGI2]
gi|268594115|ref|ZP_06128282.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae 35/02]
gi|291044543|ref|ZP_06570252.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae DGI2]
gi|59717481|gb|AAW88886.1| putative tRNA processing exoribonuclease BN [Neisseria gonorrhoeae
FA 1090]
gi|193933047|gb|ACF28871.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae NCCP11945]
gi|268547504|gb|EEZ42922.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae 35/02]
gi|291011437|gb|EFE03433.1| tRNA-processing ribonuclease BN [Neisseria gonorrhoeae DGI2]
gi|317163543|gb|ADV07084.1| ribonuclease BN/unknown domain fusion protein [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 408
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 95/273 (34%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + I F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVIRRFSEERVPQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + NR +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + A
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWADALKTAAR 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTLLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|288802213|ref|ZP_06407653.1| YihY family protein [Prevotella melaninogenica D18]
gi|288335180|gb|EFC73615.1| YihY family protein [Prevotella melaninogenica D18]
Length = 448
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 101/267 (37%), Gaps = 3/267 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R F Y ++ F D A + +S S ++++ P +A G QF+
Sbjct: 27 RNMLIRQFQKFYLTVKFFFVRDHAASTAQLSFSTIMAIVPIASMIFAIANGFGFGQFLEK 86
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A PE + ++ I + Y + + + + + ++
Sbjct: 87 QFREMLSAQPEAATWLLKLTQSYLVHAKTGLFIGIGLMIMFYSVFSLIRTVETTFDNIWQ 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R + + L ++++I+S + + ++V + ++ R
Sbjct: 147 VKDSRPLSRIVIDYTALMFLVPISIIILSGLSIY---FYSFVENLNGLRFLGTIASFSLR 203
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + I +++F+P AK KI + + I+ + ++ H + ++Y+ +
Sbjct: 204 FLVPWAILTLMFIVLYVFMPNAKVKITKTVAPAMIASIAMLCLQAVYIHGQIFLTSYNAI 263
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAEL 268
Y A++ ++++ + AEL
Sbjct: 264 YGSFAALPLFMLWILASWYICLFCAEL 290
>gi|322513797|ref|ZP_08066883.1| tRNA-processing ribonuclease BN [Actinobacillus ureae ATCC 25976]
gi|322120365|gb|EFX92295.1| tRNA-processing ribonuclease BN [Actinobacillus ureae ATCC 25976]
Length = 276
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 102/268 (38%), Gaps = 6/268 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + + A +++ S +L++ P I+ ++ F ++
Sbjct: 9 KIFFKRWQQNKIAISAGYLTYSTMLAIVPLIMVVFSVFTFFPIFHEATELLKDFIYDNFA 68
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A + +E +++ ++ + IS + + + ++ SLN + RS +I+
Sbjct: 69 PNAGHLVEEYIKLFVSNSEKMGLISIVGLFVVAVMLISSIDQSLNDIWHNTRKRSIFISF 128
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+ ++ A + + + + + +L + Y +++
Sbjct: 129 LLYTLILIFAPIFAGMSIAISTYVMSFAVFSEN------GMLSFSHHLLKYVPFCLIWLL 182
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
FV+ +P + K G +F I + +G F Y+ TF +Y +Y LA + +
Sbjct: 183 FTFVYKIVPNTEVKGKHAAIGALFAAIFFTLGKQAFIWYVTTFPSYQAIYGALAVLPIMI 242
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKK 280
V++++ +LG + + + K
Sbjct: 243 VWIHLSWQVVLLGGQFASVLKDLEMIKN 270
>gi|164688039|ref|ZP_02212067.1| hypothetical protein CLOBAR_01684 [Clostridium bartlettii DSM
16795]
gi|164602452|gb|EDQ95917.1| hypothetical protein CLOBAR_01684 [Clostridium bartlettii DSM
16795]
Length = 303
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 44/222 (19%), Positives = 96/222 (43%)
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
++ I+++ P + I V+ + L S A + S V++L +N
Sbjct: 63 YLNKYINILESLIPSSAFIILNGLIRSVIGNRSIKLLISSFFLAIWSISKAVKSLIRGIN 122
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
R+Y V E RS++ IS + ++ + ++I + + +V + I
Sbjct: 123 RSYGVNENRSFFKVLFISLIFSIMLLLLILISLVLLIGGEKIGIFVFDLIGLDKYFIYIW 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
R +L + L+ ++ ++P K K+ +PG + + W++ ++ Y+ FS
Sbjct: 183 NILRYSVGILFVISILVILYTYMPNTKMKVRDSVPGAVLSTFLWIIVTYGYSFYVNNFSN 242
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y +Y L ++ + +LY+ + G+ELNA ++ +
Sbjct: 243 YDVIYGSLGGVIVLITWLYLSSWTILAGSELNARLLYKKRNR 284
>gi|221196915|ref|ZP_03569962.1| ribonuclease BN [Burkholderia multivorans CGD2M]
gi|221203585|ref|ZP_03576604.1| ribonuclease BN [Burkholderia multivorans CGD2]
gi|221177519|gb|EEE09947.1| ribonuclease BN [Burkholderia multivorans CGD2]
gi|221183469|gb|EEE15869.1| ribonuclease BN [Burkholderia multivorans CGD2M]
Length = 336
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + +MA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 39 AFKRFSSDRCSSMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 98
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +LN + E R +
Sbjct: 99 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALNVIWPATESRWSSVL 158
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ V + + + V + + A+ ++ + +++ ++ + L
Sbjct: 159 GLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFIGTWLLGDSPYVVVTNVLQLVVGVAVLA 218
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A G I + I + G LF Y+ T S + S
Sbjct: 219 GAFSALLKFLPDAHVAWRDAAVGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 277
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY + +LGAE +A+
Sbjct: 278 LLMWLYFSALVLLLGAEFSAA 298
>gi|237786124|ref|YP_002906829.1| hypothetical protein ckrop_1558 [Corynebacterium kroppenstedtii DSM
44385]
gi|237759036|gb|ACR18286.1| putative membrane protein [Corynebacterium kroppenstedtii DSM
44385]
Length = 371
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 100/276 (36%), Gaps = 8/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
D + + + E+ G A+ I+ ++LS+ P ++ GF+ G + V
Sbjct: 41 WLDHLMRMQDRYSEQGGNHFAAGITYFSVLSLIPIMLIVFAGFGFVLAGNDAAMDKVEQQ 100
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + ++ + I L A + + LR+ ++ ++V
Sbjct: 101 ILDLGTSGLKDTLQ-TLVDTAVERRSSIGVIGLLTALWTGLGWMGNLRLGVSEMWKVKIT 159
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA----YVRKFFPALGNLLLIIWNGR 181
++ +S L+ + + +FV AI + ++ + + W
Sbjct: 160 PDNFVKGKLSDLIGLIGLLVAFVAAFVVTAIGSSSLTKKFLEYIELDSVPGIHFVTWLVA 219
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+LA +I +++ FLP K S+L I +++ + F ++ + +
Sbjct: 220 FIVGLLANYIVFVWLLKFLPREKVPWKSVLQAAIIGAVAFELIKQ-FGAVFISATMNNPA 278
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
A ++ +V Y++ + + A+
Sbjct: 279 AAAFGPVIAIMVLFYLIWRVVLYCSAWAATTQESRK 314
>gi|163736480|ref|ZP_02143899.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
gi|163743276|ref|ZP_02150657.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161383464|gb|EDQ07852.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161390350|gb|EDQ14700.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
Length = 287
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 87/265 (32%), Positives = 149/265 (56%), Gaps = 4/265 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANL----AGFLGAHQFVPTVIDVVF 67
+Y A + F +++GW ++SHI++S +L++FPFI+F L AG + ++++VF
Sbjct: 14 LYLAAKRFNDKNGWVLSSHIAMSLMLALFPFILFTVALTGAVAGAFSDGIDLKNLVELVF 73
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G+WP+ ++ PI E+ VLA + G+ T+ + A YF+SNGV+A+R+++ +AY + R
Sbjct: 74 GSWPDSVSDPIVREVYSVLATSSTGVVTLGGVIAIYFASNGVDAVRLAMVQAYHERDHRP 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ TR + G V+L ++ + + +PL ++ FFP + +
Sbjct: 134 FWKTRGLCIGLVILGGAGIMAAAVFELILPLYARHLASFFPQVPLARNWESGLNGILVAV 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
I + H+ LPA + + +LPGV+ T + W + F YI +F++YS YAGLA
Sbjct: 194 IPLIAVCAFHMLLPAKRHRFTQVLPGVLLTVVLWWAAGLAFAIYISSFASYSATYAGLAG 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
M L+FLY+ ILGAELN +
Sbjct: 254 AMAALIFLYLNSAILILGAELNGVL 278
>gi|170693014|ref|ZP_02884175.1| ribonuclease BN [Burkholderia graminis C4D1M]
gi|170142012|gb|EDT10179.1| ribonuclease BN [Burkholderia graminis C4D1M]
Length = 312
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 98/281 (34%), Gaps = 6/281 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
F + +A + F+ + MA+ + + S+ P ++ +AG F G +
Sbjct: 16 RLRGAFTTVVNAGKRFMSDRCPMMAASVGFYSAFSLAPTLLMVLAVAGWFFGEDAARGRL 75
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYR 121
+ V G + A+ + + G+ +S + +S +L +L+
Sbjct: 76 FEQVRGIMGKDAAEAMQTIVEHAHRASGSGIAAVVSVVLLIIGASATFTSLNTALDVVLE 135
Query: 122 VVEMRSWYITRLISF---GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + + + L + V + + A+ + L+++
Sbjct: 136 AEKNVKSKGSITWLVRTRLVSVGMVLGLGFLLVVSLVLDTAITFAGHAIFGDSPLVVVTA 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ L + ++ A + G + I + VG LF Y+ T
Sbjct: 196 IVQTVLGLIVLGAAFTALLRWMSDAPVSLAHAAVGGMTAAILFSVGRHLFGLYLTHAGTA 255
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S+ + S+ +++LY F+ GAE A + K
Sbjct: 256 SS-FGAAGSLAVLMMWLYFSAAVFLFGAETTAELAGRNEVK 295
>gi|297203442|ref|ZP_06920839.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197716352|gb|EDY60386.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 321
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 98/271 (36%), Gaps = 4/271 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + +D A+ ++ A+L++FP ++ ++ G P VID +
Sbjct: 49 RWWVALRRTPMTVWNDDVTDWAAALTYYAVLALFPLLLVILSILGLT-MPTAKPEVIDRM 107
Query: 67 FGAWPEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
A P + + Q+ A P A L A + + + R +L +R+
Sbjct: 108 TQAAPAESRALLRGTLRQMAAQPTAAWTLIFAGGAGALWSGCSYLSVFRRALYSMHRISA 167
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + T L+ S L+ + + + + R
Sbjct: 168 DRPVWRTAPRIIATALVLSSLLLTSTLALLLTGGLARRLGQALGWGTGPQATWDTLRWPV 227
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ ++ ++ PA+ + + PG + ++ F Y +Y +Y
Sbjct: 228 VAVVAVALVLVLYRSGPASSRPVRRMAPGGTLAVALLLTVSLGFAVYTSMV-SYDRLYGS 286
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIY 275
LA ++ LV+L++ + ++GA+ NA +
Sbjct: 287 LAGVVVFLVWLWLSNLSLLIGAQFNAELTKR 317
>gi|238759865|ref|ZP_04621021.1| tRNA-processing ribonuclease BN [Yersinia aldovae ATCC 35236]
gi|238701926|gb|EEP94487.1| tRNA-processing ribonuclease BN [Yersinia aldovae ATCC 35236]
Length = 273
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 39/266 (14%), Positives = 94/266 (35%), Gaps = 8/266 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEV 73
++ +A H++ +LLS+ P + L + + +F +
Sbjct: 2 LYTRIDKDGLTMLAGHLAYVSLLSLVPLVTVIFALFAAFPMFADISIKLKAFIFANFMPA 61
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
I + + Q +A + + + + + ++ LN +R RS +
Sbjct: 62 TGDIIQNYLEQFVANSNR-MTVVGTCGLIVTALLLIYSVDSVLNIIWRSKTQRSLVFSFA 120
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + L + + + + + A + +I +L ++
Sbjct: 121 VYWMVLTLGPILVGASMVISSYLLSL------HWLANAQVGSMIDEVLRVFPLLISWLSF 174
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ +P + G + + + +G FT YI F +Y +Y LA I +
Sbjct: 175 WLLYSVVPTVRVPARDAFIGALVAALLFELGKKAFTMYITLFPSYQLIYGVLAVIPILFL 234
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
++Y +LGAE+ ++ Y +
Sbjct: 235 WVYWSWCIVLLGAEITVTLSEYRTER 260
>gi|241758992|ref|ZP_04757104.1| tRNA-processing ribonuclease BN [Neisseria flavescens SK114]
gi|241320813|gb|EER57046.1| tRNA-processing ribonuclease BN [Neisseria flavescens SK114]
Length = 400
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/269 (17%), Positives = 97/269 (36%), Gaps = 16/269 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
++ + F EE +A+ ++ + LL++ P + +A Q+ + +
Sbjct: 18 FVWFVVRRFDEERVPQVAASMTFTTLLALVPVLTVMVVIASAFPVFDQWSGAFVSFINRT 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D I A L I ++ S + + + NR +RV R W
Sbjct: 78 IVPQGADMVFDYINAFRD-KATNLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNSQRPWM 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + + ++L + V + ++ R T+ +
Sbjct: 137 MQFLVYWALLTFGPLSLGVGLSVVIGQVQVVSGSE--------------WLRGITTVSFI 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ F+P L G T LF Y+ F Y ++Y A++
Sbjct: 183 TLLLWGLYRFVPNRFVPASHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAAVP 242
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++L +L + GA L +S+ +
Sbjct: 243 FFLLWLNLLWTLVLGGAVLTSSLSYWRGE 271
>gi|89067849|ref|ZP_01155293.1| ribonuclease BN [Oceanicola granulosus HTCC2516]
gi|89046447|gb|EAR52503.1| ribonuclease BN [Oceanicola granulosus HTCC2516]
Length = 300
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 47/259 (18%), Positives = 102/259 (39%), Gaps = 9/259 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + E++ +A+ + ++++FP I + G + V + +
Sbjct: 5 GRWWKAMKSVAVEIGEKNLGLIAAGCAFFGIVAIFPAIGAIIAIFGLVADPAIVSAQLQL 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRV 122
+ P K +++I +LA L S L A + + GV ++ LN +
Sbjct: 65 MEEFIPAEAYKLFSEQINALLAARTDQLGWTSLLSLMIALWSARLGVASIMQGLNAIHG- 123
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
L LL +V+L+ +S + + + V F ++ R
Sbjct: 124 ----QPNRGGLRQIMVALLLTVSLIGVSVASLLLVVIAPIVFSFLQLGAAAAWLLEALRW 179
Query: 183 YATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L GL ++ F P A+ + + PG + + W+ +V F+ Y+ F Y+ +
Sbjct: 180 LVALFILLAGLGILYRFGPNARGDRPSWVSPGAVLAVVLWLAASVGFSLYLANFGRYNEV 239
Query: 242 YAGLASIMTCLVFLYMLGV 260
Y + +++ L++LY+
Sbjct: 240 YGSIGAVIALLIWLYISAF 258
>gi|325982395|ref|YP_004294797.1| ribonuclease BN [Nitrosomonas sp. AL212]
gi|325531914|gb|ADZ26635.1| ribonuclease BN [Nitrosomonas sp. AL212]
Length = 328
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 110/281 (39%), Gaps = 10/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
M+ F + + + I FVE + M++ ++ L ++ P + + F G
Sbjct: 1 MKLTFNNAWPVFKEVIFEFVEVNVLKMSASLAFYTLFALAPMFIIILTIVQFFFGLEAIE 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNR 118
+ + A + + I L T ++ + ++ ++ S+N
Sbjct: 61 GDLYPQLSELIGSQAATQLEEMIKNAAITERSALSTTGSVMMLMFLATGVFVEIQESINY 120
Query: 119 AYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+R+ I R +SF V+ L++ + A+ + + ++K FP +
Sbjct: 121 IWRLKAKPKTGVIKLIINRFLSFSMVISLGFILLVSLALNAALEVLMQSLQKMFPII--T 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ + ++ + T + + + LP AK + +++ G I T + +++G + T Y+
Sbjct: 179 VYLTYSLNLILTFIVITFVFSCIFKILPDAKIRWRNVIVGAITTALLFMIGKSVITFYLS 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
S ++ Y SI+ ++++Y + A L
Sbjct: 239 N-SDVNSTYGAAGSIVIIMLWVYYSAIILYFSAILTRVFAQ 278
>gi|218132840|ref|ZP_03461644.1| hypothetical protein BACPEC_00701 [Bacteroides pectinophilus ATCC
43243]
gi|217991713|gb|EEC57717.1| hypothetical protein BACPEC_00701 [Bacteroides pectinophilus ATCC
43243]
Length = 283
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 55/268 (20%), Positives = 115/268 (42%), Gaps = 3/268 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ I +D A+ S LLS FPFI +L +L ++ V+ P
Sbjct: 15 FQIINKIKNDDLPGYAAQSSYFILLSFFPFITLLLSLIHYLPLE--YDVLMQVLNDIIPA 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + + SA+ + + G +L N + + E R++ + R
Sbjct: 73 YFKEAAVSFVGGLYNSSSISFTGFSAIVTLWAAGRGFMSLMKGFNAIHGIAEDRNFIVRR 132
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
IS LL + + + V L + ++FP L ++ + + + + L +
Sbjct: 133 SISSVQTLLFIIIIAALLIFVVFGNKLLGFTSRYFPYLAIIIEAVIDIKWLFFPVLLTLA 192
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+F+ F+P+ + + + LPG + + + W ++++ Y+ +TY+ M+ GL +++ L
Sbjct: 193 FLFMFKFIPSRRLPLFAQLPGAVISSVGWYGFSLIYAVYVNN-NTYTAMFGGLGTLILAL 251
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRKK 280
V+LY + GAE N+ + Y +
Sbjct: 252 VWLYSCMMILFFGAEFNSLISHDYVSAQ 279
>gi|296128677|ref|YP_003635927.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
gi|296020492|gb|ADG73728.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
Length = 359
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 112/275 (40%), Gaps = 3/275 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVID 64
++ + F+ + +A+ ++ A+L++ P ++ +L + + V +V+D
Sbjct: 38 RSWLYVLRTTLREFLGDQCTDLAAALTYYAVLALAPALLAVVSLLSLVDRPEEVVESVVD 97
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ GA + + ++ VPA G + A + +S V A +NR Y V
Sbjct: 98 LAAGAGAGDQVDGVRPVLERLTEVPAAGFALVAGLVVALWSASGYVAAFSRGMNRIYEVD 157
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R + R + + V V++ + V V + + +
Sbjct: 158 EGRPIWKLRPVLLLLTAVLVVIAVLVVALLVLSGPVAESVGGAVGLSSAAVTVWQVAKWP 217
Query: 184 ATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + + + ++ P + + + G + + WV+ V F Y+ FS+Y Y
Sbjct: 218 VVLLLVVVAVALLYHGTPNVRQPRFRWLSIGAVVAIVVWVLATVGFGLYVANFSSYDETY 277
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LA I+ L++L++ + + GAEL+A +
Sbjct: 278 GSLAGIVVLLLWLWLTNLALLFGAELDAELERGRE 312
>gi|332884795|gb|EGK05051.1| hypothetical protein HMPREF9456_03204 [Dysgonomonas mossii DSM
22836]
Length = 439
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/269 (17%), Positives = 105/269 (39%), Gaps = 7/269 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + AI + E + AS ++ S LLS+ P + +A G V T +
Sbjct: 35 FYDIIKSFILAIRNIDGEQLFTRASALTYSTLLSIVPMLAVLFAIARGFGFQNIVKTQLF 94
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
F E++ K + + + Y N + + + N+ +++ +
Sbjct: 95 SYFAGQEEILNKATAFIDKSIEYAQGGIFLGVGVILLLYTVINLLSNIEDNFNKIWQIKK 154
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+++ +++A + L+ + + + + L L+I
Sbjct: 155 GRTYFRMFTDYLALIIIAPIFLICNAGLNILLSTTAEQ-------QYILGLVIGPFMKVV 207
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + +++++P K K S L G +FT I + V +L+ + S Y+ +Y
Sbjct: 208 PFLITILLFTILYIYIPNTKVKFTSALLGGVFTGICFQVFQMLYIGGQIWISKYNAIYGS 267
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
A++ L++L + F + G +L+ +
Sbjct: 268 FAALPLLLLWLQLTWFFVLFGVQLSFAYQ 296
>gi|310778558|ref|YP_003966891.1| ribonuclease BN [Ilyobacter polytropus DSM 2926]
gi|309747881|gb|ADO82543.1| ribonuclease BN [Ilyobacter polytropus DSM 2926]
Length = 425
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 96/276 (34%), Gaps = 10/276 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + ++ E++ + AS IS ALLS+ P + ++A LG + +
Sbjct: 26 KKKAASLVRMVVFTAENYKKTRSNLWASSISYYALLSIVPILAIAFSIAKGLGVEELIRN 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I + + K I + + L + + + + S N +
Sbjct: 86 EILKNSPLQEDALEKLILFSEKLMSSAKGGVLAGVGFVFLGWSVIKIFTLIEKSFNEIWG 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS F VL+ + L++ + V + + + ++
Sbjct: 146 VKRQRSIIRKFTDYFSIVLMFPMVLLLSNGVITTLQM----------HFISEGSPLFFII 195
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L L ++L +P K L + I + + + V Y+ +
Sbjct: 196 HWIPYLLLISFFTLLYLIIPNTKVNFSHALLAGLVVGILFQGLQLSMIKFQVILLNYNKV 255
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + I +++ ++ + ILGA L+ + Y
Sbjct: 256 YGSFSVIPIFMIWQKIVWIIIILGAHLSFILQNSYK 291
>gi|257066741|ref|YP_003152997.1| ribonuclease BN [Anaerococcus prevotii DSM 20548]
gi|256798621|gb|ACV29276.1| ribonuclease BN [Anaerococcus prevotii DSM 20548]
Length = 324
Score = 116 bits (291), Expect = 3e-24, Method: Composition-based stats.
Identities = 46/296 (15%), Positives = 109/296 (36%), Gaps = 20/296 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + + + I D ++ +S L + P I+ ++ +
Sbjct: 1 MNKNKPKTKNFLLNLINRVANHDIMTYSAALSFYLLQASIPLIMVLVSVLSYF--ISGRE 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I P + I + I + ++ + + TI+ L A + +++G+ L ++N A
Sbjct: 59 DIIYRFLDFLPNTTIELIAEVIDILLISSQSPTVTTITILFALWSATSGINKLVNAINHA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP----------- 168
Y + + + RL+S + L+ +V M + +
Sbjct: 119 YGLHKQKQAIKQRLMSVLFTLIFISLIVFMLIFQIYGTSIINIFNAQIIEKITVHFNTNI 178
Query: 169 ---ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA---KSKIMSILPGVIFTWISWV 222
+ L + I + + + P+ + + G +F ++
Sbjct: 179 QKALDMISSPLFKLITFVLPFLIMAIAIGVFYRYSPSKANNRISVKEAFCGGLFATVAIF 238
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + ++++++ +S S +Y LA I+ ++L M+ ILGAE A+ Y
Sbjct: 239 IASFIYSYFVNNYSNQSLVYGALAGILALFIWLLMVSTIIILGAECIAAYREGYKE 294
>gi|326798948|ref|YP_004316767.1| ribonuclease BN [Sphingobacterium sp. 21]
gi|326549712|gb|ADZ78097.1| ribonuclease BN [Sphingobacterium sp. 21]
Length = 320
Score = 116 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 100/284 (35%), Gaps = 17/284 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
++++ F ++ + F ++ M++ +S + ++ P ++ + F+ G
Sbjct: 6 KQFYKDAFTLLKATVIGFGDDKVSKMSAALSYYTIFALAPLLIIILAVVSFVLGDDAQQG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + A I I + + I Y S+ ++ SLN
Sbjct: 66 RIFQQINEYVGADAAALIQSLIKGLSVGKGSIIATIIGVGTLIYASTKVFVEMQDSLNMI 125
Query: 120 YRVVEMRSWYITRL-----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V +L +SF VL+ LV+ + V I + + K+ P
Sbjct: 126 FNVKPKPKRGWVKLLVDRALSFSIVLILGFLLVVSLLLNVVISVISTTLIKYLPDFQVFG 185
Query: 175 L---------IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
L ++ T + L + + FLP K K + G FT I +++G
Sbjct: 186 LDLFDETTNIALYLANTLITFIVLSVLFGCIFKFLPDVKIKWKDVRSGAFFTAILFMIGK 245
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
Y+ + S Y SI+ L+++ GAE
Sbjct: 246 WAIGLYMQHAAPASG-YGAAGSIVIILLWINYTSSILFFGAEFT 288
>gi|302522631|ref|ZP_07274973.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302431526|gb|EFL03342.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 411
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 99/262 (37%), Gaps = 13/262 (4%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVIDVVFGAWPE 72
+E +A+ + LLSV P ++ L G++ F +D +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLCLVGLLGYVDAWTGADTIAGFEQHFLDASRAVLSD 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + I + + + +I + A + S V ++ Y + +R TR
Sbjct: 61 QGVHDIAEPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITVMYGLDGVRGIVATR 120
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+SFG ++ + + + VA P + ++ + + ++ +
Sbjct: 121 LLSFGLFIVGLLVCSVALPLMVAGPDTVVHLLPWSGL------AVQILYWPVVIILCVVF 174
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L ++ +S + +PG W V + Y+ + T+Y LA+ + L
Sbjct: 175 LTTLYHVSVPVRSPWIEDVPGSFVALAMWFVCSFALRIYLTSTIEGPTIYGSLAAPVAVL 234
Query: 253 VFLYMLGVFFILGAELNASMII 274
+++ + ++GA +NA++
Sbjct: 235 LWIGVSAFAVLVGAAMNAAIDR 256
>gi|325528119|gb|EGD05320.1| putative ribonuclease BN [Burkholderia sp. TJI49]
Length = 310
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 99/268 (36%), Gaps = 5/268 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSADRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGQRGGIATLISFAALAVGASATFASLSAALSVIWPATESRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ +V + +++ + + + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTAITFVGTWLLGDSPYVVVTNLIQFFVGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G + + I + G LF Y+ T S + S
Sbjct: 203 GAFAALMKFLPDARVAWRDAAVGGVVSAILFSGGKKLFALYLAHAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWR 278
L++LY + +LGAE A+ + Y R
Sbjct: 262 LLMWLYFSALVLLLGAEFAAARGVAYRR 289
>gi|23098330|ref|NP_691796.1| hypothetical protein OB0875 [Oceanobacillus iheyensis HTE831]
gi|22776556|dbj|BAC12831.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 274
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 3/271 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + E D + +A+ ++ LLS+FPF++F NL +L +I
Sbjct: 4 WISLGKKFYQRIEEVDVFGLAAQLAYFFLLSLFPFLLFLLNLIAYLPID---IELIMQTI 60
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G + + L L GL +IS L + +SNGV A+ + NR+Y + RS
Sbjct: 61 GTFAPEQVMQLISTNLDTLTEQNTGLLSISILGTLWAASNGVNAITRAFNRSYWIDTERS 120
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ TRLIS + + +++ + V + YV F + I R +
Sbjct: 121 FFTTRLISIVLTIGMVIIILLALLLPVFGRMIGLYVFSMFGFTTGFIEIWETLRWIISSA 180
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
FI L+F++ P + ++ G +F SW + + F+ Y+ YST Y L +
Sbjct: 181 IFFIVLLFLYKLAPHKRIVFSEVIWGTVFATFSWQLVSWGFSFYVNNLGNYSTTYGSLGT 240
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ +++ Y+ G+ I G LNA + R
Sbjct: 241 VIVLMIWFYLFGIIIITGGVLNAFIQDQRKR 271
>gi|227540637|ref|ZP_03970686.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
gi|227239499|gb|EEI89514.1| ribonuclease BN [Sphingobacterium spiritivorum ATCC 33300]
Length = 336
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/289 (19%), Positives = 106/289 (36%), Gaps = 15/289 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------GA 55
+ ++ + I F+++ M++ ++ + S+ P I+ GF G
Sbjct: 7 KARVKDFGGLMMNVINGFLDDKCMKMSASLAYYTVFSIGPLIIIIIWCIGFFYGTQLDGP 66
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRI 114
V + + +A + I ++ + I + S+ ++
Sbjct: 67 TGARDEVFKEFSELFGKDVAVQVQSTIQKISFENRSNIGIIVGIVTLIITSTTIFVDIQD 126
Query: 115 SLNRAYRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
S+N ++V RLISF VL L+ + I Y ++F
Sbjct: 127 SINTIWKVKAKAKKGWLKLIINRLISFSMVLGLGFLLIASLMINGIIVALTNYFGQYFEN 186
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ L ++ T + + F+ FLP AK + IL G IFT + ++ G +
Sbjct: 187 IS--LPMLDWINTGITFMVITALFGFIFSFLPDAKVRFRDILGGAIFTALLFMFGRYAIS 244
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YI +T S Y SI+ L ++Y GAE + I Y +
Sbjct: 245 LYITQSATASA-YGAAGSIIVLLGWVYYSSAILYFGAEFTKEIAIRYGK 292
>gi|333023117|ref|ZP_08451181.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
gi|332742969|gb|EGJ73410.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
Length = 298
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 101/276 (36%), Gaps = 3/276 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M Y + + +D A+ ++ A+L++ P ++ +A L
Sbjct: 1 MFRYAADWWPALRRTPLSLWNDDVTDDAAALTYYAMLALLPALLVTV-VASALLGPDTAR 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
T+I + P + D + ++L A L +A + + + + R SL+R
Sbjct: 60 TLIAYLTDYAPGQAGPQLHDLLTRMLTENATAWPLIATGVFSAFWSACSYLAVFRRSLHR 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+R + R+ L LV+ + + V + + + + L
Sbjct: 120 MHRTTDARTPVKRAHRIVLTALALLGLLVLTALLLVLSNPVVDAIGRALHLDEGVALAWR 179
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R A + + P + LPG + + W++ FT Y TY
Sbjct: 180 VLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPGGVLATVLWLLATAGFTLYTSLIGTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
S +Y LA I+ L++L++ + + GA+ A +
Sbjct: 240 SALYGSLAGIVVFLIWLWLSNLALLAGAQFAAELGK 275
>gi|332877623|ref|ZP_08445367.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684472|gb|EGJ57325.1| YihY family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 299
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/270 (18%), Positives = 112/270 (41%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ I ++ AS I+ S L++FPF++F NL ++ F +
Sbjct: 29 LYDLLELYISGLIKGTLTHRASAIAYSFFLAIFPFLLFILNLIPYIPIDHFQVDFWVFID 88
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
G P + +D + L + + + +NG+ A+ +Y + R+
Sbjct: 89 GLLPPGTHQFFSDIFFDIAEKRRGSLLSSVFFLSIFLMTNGIMAIFGGFEFSYHIQLTRT 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L + ++ S+ ++ + F+ + L + L + ++ ++ +
Sbjct: 149 YVKQYLYALMVAIILSLLVLFVVITFMGYEIYLVPYLEEINFLTDNETLLKVSKLGFVAV 208
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+I + F + G FT I + V LF YI FS Y+ +Y + +
Sbjct: 209 MTYIATSILFYFGTIEGRESKFFSVGSTFTTILFGVTTYLFGIYIENFSQYNQLYGSIGA 268
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ L+++++ +LG ELNA+++
Sbjct: 269 LLIFLLYIWINSNILLLGFELNATLLKLKK 298
>gi|258648610|ref|ZP_05736079.1| YihY family protein [Prevotella tannerae ATCC 51259]
gi|260851396|gb|EEX71265.1| YihY family protein [Prevotella tannerae ATCC 51259]
Length = 413
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 89/275 (32%), Gaps = 12/275 (4%)
Query: 4 YFCIVFDIIY-DAIEHFVEEDGWAM-------ASHISLSALLSVFPFIVFGANLAGFLGA 55
+F I + ++ A ++ S L +V P + +A G
Sbjct: 6 FFAWWCRFIRYRVVRLYLNAGITFYREGQLAAARALTFSLLFAVVPILAIAFAIAKGFGL 65
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ I F PEV + ++ + + + + +
Sbjct: 66 DNMLEQQIRTAFATQPEVTTFLLNFVHNYLMRTQGGIFLGLGIFLLLWTLFSLAGEIEGT 125
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
N+ ++V + R+ Y L V L+ S + + + + F +LL
Sbjct: 126 FNKIWKVKQDRTIYRKVTEYTSLFFLLPVLLISSSGFSIFLTSFVEKLPDIFFLHNSLLK 185
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ L + ++ F+P K K S + ++ ++ H +
Sbjct: 186 CLQ----LVPYLIMVCFCTGLYFFIPNTKVKWKSAFFAGLPVGLALQALQYVYIHSQLYL 241
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
S Y+ +Y A++ +++L + GA L+
Sbjct: 242 SGYNAIYGSFAALPMLMIWLQFSWYIVLFGATLSY 276
>gi|115358125|ref|YP_775263.1| putative ribonuclease BN [Burkholderia ambifaria AMMD]
gi|115283413|gb|ABI88929.1| putative ribonuclease BN [Burkholderia ambifaria AMMD]
Length = 310
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 92/261 (35%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSHRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALSVIWPNSENRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + + ++ + + I ++ + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTVITFIGTWLLGDSPYVAITNVLQLVVGVAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A + G I + I + G LF Y+ T S + S
Sbjct: 203 GAFAVLMKFLPDAHVAWHDAVIGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY +LGAE A+
Sbjct: 262 LLMWLYFSAAVLLLGAEFAAA 282
>gi|168698042|ref|ZP_02730319.1| putative ribonuclease BN [Gemmata obscuriglobus UQM 2246]
Length = 314
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 94/269 (34%), Gaps = 4/269 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAW 70
+Y A ++++D +++ +++ +LS+ P +V + G V V
Sbjct: 28 LYAAARAWLDDDAMRLSAAVAMYTILSLSPLLVITIKVLALVFGEEAASGQVRRQVEQFL 87
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A+ + + + + A L T +++ + +S LR SLN + V
Sbjct: 88 GPTGARAVEGMVTETVRPGAGLLATAASVGVLLFTASGVFAELRDSLNALWGVAPRPGRG 147
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + V V + V F A + ++ + L +
Sbjct: 148 WWAAVRDRFQSIGMVFAVGFLLLVSQAVTTALAVMSEFVAG-GAGRVASATDLFVSTLVV 206
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + LP + + L G T + VG L Y + +++Y S +
Sbjct: 207 AILFGLIFRLLPDVELRWRDTLFGAAVTAALFKVGQYLLALYFTY-GSTASVYGAAGSFV 265
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
L+++Y GAEL + R
Sbjct: 266 VVLLWVYYSCWILFYGAELIQVRLRRQGR 294
>gi|296161436|ref|ZP_06844242.1| ribonuclease BN [Burkholderia sp. Ch1-1]
gi|295888251|gb|EFG68063.1| ribonuclease BN [Burkholderia sp. Ch1-1]
Length = 305
Score = 116 bits (290), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 99/280 (35%), Gaps = 5/280 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R +F I +A+ F + +A+ IS A S+ P ++ + G F G
Sbjct: 12 RRRGGSIFHIAVEAVGRFASDRCTTLAASISFYAAFSLAPTLLIVLTVTGWFFGEAAARG 71
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNRA 119
+ V A + + GL + ++ +S +L +L+
Sbjct: 72 KLFAQVHDILGNDAAGAMQAVVESAHRASGGGLAALLSIMLLVIGASATFSSLNTALDVV 131
Query: 120 YRVVEMRSWYITRL--ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ L + + + + V + + A+ +V + L++
Sbjct: 132 FAAKPKAGLAGLALLVRARLVSFGLVLGVGFLLVVSLVLDTAITFVGQRLFGESPLVMAA 191
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ L + +LP + G I + + + VG LF Y+ T
Sbjct: 192 QIAQTVFGIVVLSAAFAAMLRWLPDTHVPFRHAMTGAIVSAVLFSVGRRLFGLYLAHAGT 251
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ + S+ +++LY F+LGAE+ ++M
Sbjct: 252 ANS-FGAAGSLAVLMMWLYFSAAVFLLGAEVASAMDGERQ 290
>gi|261378243|ref|ZP_05982816.1| YihY family protein [Neisseria cinerea ATCC 14685]
gi|269145322|gb|EEZ71740.1| YihY family protein [Neisseria cinerea ATCC 14685]
Length = 408
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 45/273 (16%), Positives = 94/273 (34%), Gaps = 9/273 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDV 65
+ + + F EE A+ ++ + LL++ P + +A + + +
Sbjct: 14 KICAFAWFVVRRFSEERVLQAAASMTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSF 73
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V A + D I A L I ++ S + + + N +RV
Sbjct: 74 VNQTIVPQGADMVFDYIDAFRD-QANRLTAIGSVMLVVTSLMLIRTIDNAFNHIWRVNTQ 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R W + L+ + + ++L + V + + A
Sbjct: 133 RPWMMQFLVYWALLTFGPLSLGVGISFMVG-------SVQDSVLSSGAQQWTDALKTAAR 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + L ++ F+P G + T LFT Y+ F Y ++Y
Sbjct: 186 LAFMTVLLWGLYRFVPNRFVPARQAFVGALITAFCLETARFLFTWYMGNFDGYRSIYGAF 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L +L + GA L +S+ +
Sbjct: 246 AAVPFFLLWLNLLWTLVLGGAVLTSSLSYWQGE 278
>gi|149185280|ref|ZP_01863597.1| hypothetical protein ED21_19542 [Erythrobacter sp. SD-21]
gi|148831391|gb|EDL49825.1| hypothetical protein ED21_19542 [Erythrobacter sp. SD-21]
Length = 287
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 17/251 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
F + A +++ +A+ ++ A L++ P + G + +
Sbjct: 24 WFAALKRAYTEANKDNAGIVAAGVAYYAFLAIVPLLAAMVMGYGLFADPATAAAHAETLA 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVE 124
G P A+ I ++ + A + G AL +LN AY + E
Sbjct: 84 GTLPRDAAELINGQLKSAAEAATGAKGFGLLIALGVALMGARGGANALVKALNIAYDIEE 143
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ L++ G + A++ L+++ A + + ++
Sbjct: 144 ERGFFRKNLLALGMTVGAAIGLIVVVGAVTAAGVLEGITGQ-------------LASLFV 190
Query: 185 TMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T +G V+ P + LPG +F ++ VV LF Y+ F +Y+ Y
Sbjct: 191 TFGFAALGAALVYRVAPHRDAPAFKFQLPGAVFFAVAIVVLTALFGFYVANFGSYNATYG 250
Query: 244 GLASIMTCLVF 254
L +++ L +
Sbjct: 251 SLGAVVVLLTW 261
>gi|85711512|ref|ZP_01042570.1| Ribonuclease BN [Idiomarina baltica OS145]
gi|85694664|gb|EAQ32604.1| Ribonuclease BN [Idiomarina baltica OS145]
Length = 282
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 102/280 (36%), Gaps = 8/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
+ + F + A H++ +LLS+ P +V + +
Sbjct: 4 KLWLKHGFKFSRHVALRSQSDSINVTAGHLTYVSLLSLVPLLVVTFTVFSAFPVFDDLKN 63
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +F + + + I + + ++ + + + + + A+ +LN +
Sbjct: 64 NIESALFANLLPTSGEQLKEYIDEFVGNASQ-MTAVGIAFLFFVAVALISAIDSALNNIW 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R R W ++ I + + L V + + + + + +
Sbjct: 123 RDTSSRRWTVSFAIYWMILTLGPVLIGTGLAATSYLVSLSQFAETYVSGIRSF------L 176
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ FI + ++ +P K G F+ I + V LF+ YI F TY
Sbjct: 177 LSAVPVVTSFIAFVLLYQLVPNRPVKFRYAAFGAAFSAILFEVSKQLFSLYITHFPTYQA 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA++ +V++Y+ + + GAE+ S+ Y K
Sbjct: 237 IYGALATVPILIVWIYLSWLIVLAGAEMTVSLEEYRLIHK 276
>gi|52424087|ref|YP_087224.1| ribonuclease BN [Mannheimia succiniciproducens MBEL55E]
gi|67460653|sp|Q65WM1|Y032_MANSM RecName: Full=UPF0761 membrane protein MS0032
gi|52306139|gb|AAU36639.1| Rbn protein [Mannheimia succiniciproducens MBEL55E]
Length = 287
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 102/281 (36%), Gaps = 10/281 (3%)
Query: 1 MREYFCIVFDIIYDAIE-HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-F 58
MR +++ F + A ++ S +L++ P ++ +
Sbjct: 1 MRRVVMTQLKLLFAVFYCRFQQNKLTQAAGALTYSTMLAIVPLVMVVFAIFSAFPMFNEA 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ +F + + I + + +K + + ++ + + + ++N
Sbjct: 61 AAELKTFIFDNFSPSAGDTVGQYIDEFVVN-SKSMSAVGIISLIAVALLLINQIDRTIND 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + R++ + I + + L + + + + I +A+ L
Sbjct: 120 IWN-SKNRNFIFSMTIYWTLLTLGPIFIGMSFAINTYIRSIIAFEGD------LGLPFGL 172
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ L ++ ++ +P K G + I + +G F Y+ TF +Y
Sbjct: 173 KLLSFVPFLLTWLSFSLIYTLVPNTKVNFRYAAVGALVAAIFFTLGKKAFAWYMATFPSY 232
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y +A++ L+++ + +F +LGA+L A + K
Sbjct: 233 QLIYGAMATLPITLLWIQLSWLFILLGAQLTAVLGDMRLIK 273
>gi|305667292|ref|YP_003863579.1| Ribonuclease BN [Maribacter sp. HTCC2170]
gi|88709339|gb|EAR01572.1| Ribonuclease BN [Maribacter sp. HTCC2170]
Length = 326
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 115/283 (40%), Gaps = 13/283 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF------LGAHQFVPT 61
++D+I I V+ + AS I+ S +++FP ++F L F +G F
Sbjct: 35 LYDLIEMYILGIVQGALSSRASSIAFSLFMALFPLLIFLVTLVPFLIPYASVGNENFDAQ 94
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P ++ + Q+ GL + + + + +NGV A+ +Y
Sbjct: 95 FLLFLESFLPTATSEYFGEIYQQIKNQQRGGLLSSAFFISIFLMANGVNAIFGGFENSYH 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-------PALGNLL 174
+ R++ + L+ SV L+ + +V + + N +
Sbjct: 155 IELTRNFIRQYAYALMVGLILSVLLMFGAAAYVYFEFYIVDYLSEWAAKTRGYDLTENDI 214
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ G++ +L + ++ F A + G + T I +++ + LF Y+
Sbjct: 215 VGAQIGKVLFFVLLSYFTTAILYYFGTAEGKQAKFFSVGALMTTILFLLTSYLFGVYVEK 274
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ Y+ +Y L ++ +VF+++ +LG ELNAS+
Sbjct: 275 FARYNELYGALGGLLILMVFIWLNSNILLLGFELNASLNSLRK 317
>gi|304439597|ref|ZP_07399501.1| possible ribonuclease BN [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371909|gb|EFM25511.1| possible ribonuclease BN [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 308
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 73/274 (26%), Positives = 133/274 (48%), Gaps = 7/274 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + +++ AMA ++ +LS+FPFI+ N+ F+ V +
Sbjct: 19 FIDKLLFRIGDKNLPAMAGSLTFFTILSIFPFIIAFLNIISFVEVFNQSEFV--NLMTML 76
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
PE I I + I Q+ + GL ++S + + +S+GV+ L I++N AY + + R++++
Sbjct: 77 PEEIYSIIAEFISQMNKASSTGLLSVSLILGIFSASSGVKQLIININYAYGIKDNRNYFL 136
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALA----YVRKFFPALGNLLLIIWNGRIYATM 186
RLI+ + LL V ++++S V +A+ +++ N+ + N A M
Sbjct: 137 RRLIAAVFTLLLMVMIILISITSVVGEMAITKAILFLQIDASNFYNVFKALRNLVPIAYM 196
Query: 187 LALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L +FI + + L + KI +LPG IFT I + + LF Y+ F+ YS Y L
Sbjct: 197 LIIFIVMYYFTLNKNIRRNIKITEVLPGAIFTTIGQNLFSALFGVYLQNFAKYSVTYGSL 256
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
SI L + Y + ++G+E+N + + K
Sbjct: 257 GSIFAFLTWSYFMSYTMLIGSEINGVLYSMKYFK 290
>gi|255533356|ref|YP_003093728.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
gi|255346340|gb|ACU05666.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
Length = 324
Score = 115 bits (289), Expect = 5e-24, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 95/284 (33%), Gaps = 9/284 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT- 61
+F V + A + F+++ +++ ++ + S+ P I+ + P
Sbjct: 9 HFFKAVAHLFIAAGKGFIDDRVMKLSAALAYYTIFSLTPLIIIIISATSLFLGDNMDPNT 68
Query: 62 -VIDVVFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + A + + + + I +S ++ S+N
Sbjct: 69 KLFGEISELVGADAANQLRSFVNNANYSGKSTFGLIIGITTLVIGASAIFVEIQDSINLI 128
Query: 120 YRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++V + RL+SF + L++ V + + +
Sbjct: 129 WKVKAVPKEGWKKLLINRLLSFSLIASLGFLLLVSLVVNSIVVGLGHKIASYIQIEQVSE 188
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
L++ T+L + + LP K + G +FT I + +G L YI
Sbjct: 189 LMMLVVTNVLTLLVVTTIFAIIFKVLPDVIIKWKPAIIGALFTAILFSLGKYLIGIYIE- 247
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + SI+ L+++Y + GAE + Y +
Sbjct: 248 VGNPGSAFGAAGSIIVILLWIYYTAIILYFGAEFTQAYAEKYGK 291
>gi|315499738|ref|YP_004088541.1| ribonuclease bn [Asticcacaulis excentricus CB 48]
gi|315417750|gb|ADU14390.1| ribonuclease BN [Asticcacaulis excentricus CB 48]
Length = 301
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 93/271 (34%), Gaps = 4/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
++ +A+ + E+ + + ++ ++LS+ P ++ +AG G ++ +
Sbjct: 19 RMLREALHEWNEDKAPRLGAALAFYSILSIGPLLLIVTGIAGIAFGREAVNGYMMAELSA 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ A + + + I + ++ L+ ++N + V R
Sbjct: 79 LIGDQGAGAVQTMLSGAFNPQQGLVATVIGFVTLIISATGFFAQLQEAMNDIWNVEPQRL 138
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + V + + + + + LA F A ++ + +
Sbjct: 139 HWKVFIQKRLLSFALVVGIGFLLLISLVVSAGLAAFSA-FIAPYVPAPVMALINLIISFG 197
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ LP A+ + + G T + + G L Y+ S S+ Y S
Sbjct: 198 VVTFLFAMTFKILPDARIEWTDVWVGAAITAVLFSFGKQLIGLYLGQ-SALSSAYGAAGS 256
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ LV++Y F GAE + +
Sbjct: 257 LIVLLVWIYYSTQIFFFGAEFTQVYSRHLGK 287
>gi|294785289|ref|ZP_06750577.1| ribonuclease BN [Fusobacterium sp. 3_1_27]
gi|294487003|gb|EFG34365.1| ribonuclease BN [Fusobacterium sp. 3_1_27]
Length = 416
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 98/262 (37%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 22 LKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAPLKG 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ + L + L + + S N + + + RS
Sbjct: 82 GTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSLIRK 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + +T +I++ + + + + ++ + + + ++++ I
Sbjct: 142 ISDYISFFIFLPLTFIILNGLILFL----------LSKIKEIVFLYYIIKNILPLISMTI 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ V+L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 192 FFMAVYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIFIF 251
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILGA + +
Sbjct: 252 LIWVRICWFIIILGAHITYLIQ 273
>gi|171318603|ref|ZP_02907751.1| ribonuclease BN [Burkholderia ambifaria MEX-5]
gi|171096201|gb|EDT41120.1| ribonuclease BN [Burkholderia ambifaria MEX-5]
Length = 310
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 52/273 (19%), Positives = 98/273 (35%), Gaps = 5/273 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAW 70
+ +A + F AMA+ I+ + S+ P +V +AG+ G V +
Sbjct: 20 VLNAFKRFSSHRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLI 79
Query: 71 PEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ A I + IS A A +S +L +L+ + E R
Sbjct: 80 GDDAAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALSVIWPSAENRWS 139
Query: 129 YITRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ L+ + + + + V + + A+ ++ + + I + +
Sbjct: 140 SMLGLVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGTWLLGDSPYVAITNVLQFVVGIA 199
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + FLP A+ + G I + I + G LF Y+ T S + S
Sbjct: 200 VLAGAFAVLMKFLPDARVAWHDAVIGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGS 258
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++LY +LGAE A+ + R +
Sbjct: 259 FAVLLMWLYFSAAVLLLGAEFAAARGDAHGRAR 291
>gi|299143561|ref|ZP_07036641.1| YihY family protein [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518046|gb|EFI41785.1| YihY family protein [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 311
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 64/276 (23%), Positives = 126/276 (45%), Gaps = 9/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + I FD + F E +++ ++ +LS+FPF++ N+ F
Sbjct: 13 LNKNYVIFFD---KFLYRFAEHRIVEISASLAYFLILSIFPFLIALLNIINFTNF--LYS 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I PE I K + I ++ + + LF+IS L + +SNG + + ++N AY
Sbjct: 68 DNIIEALSYLPEDITKIAMNFIKEIYSGSSGSLFSISVLLGLWSASNGFKKIIKNINLAY 127
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E R T+L+S + + + ++++ V + + + ++ +
Sbjct: 128 GFSEKRGILKTKLLSLLFTIALIIMILLLLLTQVFGETIINMLINYVGLGEDITYLWHIL 187
Query: 181 RIYATMLALFIGLIFVHLFLPAAK----SKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ +FI + V+ + P K ILPG IF+ IS V LF +Y+ F+
Sbjct: 188 SFIIPFIYMFITFLLVYKYSPGTDTRDLLKFSLILPGAIFSTISSVFATNLFGYYVGNFA 247
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
YS Y L I+ L++L+++ + ++G E+NA++
Sbjct: 248 KYSVTYGSLGGIIILLIWLWLMSMIILMGGEINATL 283
>gi|146300224|ref|YP_001194815.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
gi|146154642|gb|ABQ05496.1| putative ribonuclease BN [Flavobacterium johnsoniae UW101]
Length = 305
Score = 115 bits (289), Expect = 6e-24, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 107/286 (37%), Gaps = 10/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
++ ++ ++ + F +++ +++ +S + ++ P ++ + G F G
Sbjct: 3 IKNILKKIWFLLKNTFLEFNDDNAIKLSAALSYYTIFALPPLLIIIITICGFFFGEDAVT 62
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
+ + G A I + I V + +S ++ S+N
Sbjct: 63 GQLYGQINGMVGNSAAIQIQEAIKNVQLSGDNMFATVFGIVMLLIGASGVFAEIQSSINF 122
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ + + RL+SF + +++ V + L + ++ +FP +
Sbjct: 123 IWGLRAKPDKGIKKFIQNRLMSFSMIASVGFLMLVSLLVNTTLDLVSSRLKIYFP--EST 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ + + + + ++ + + LP K + G T + +++G Y+
Sbjct: 181 VYLFYVVNVVIVLASITLLFTIIFRTLPDGKIRWKDAFIGSGVTAVLFMIGKFAIGFYLG 240
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ST +++Y S++ LV++Y + GAE Y K
Sbjct: 241 S-STVASVYGAAGSVIIILVWVYYSAIILYFGAEFTKVYAKSYGGK 285
>gi|322435672|ref|YP_004217884.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
gi|321163399|gb|ADW69104.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
Length = 682
Score = 115 bits (288), Expect = 6e-24, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 95/272 (34%), Gaps = 2/272 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + + A ++ + +LS+FPFIV LA + + V+ +
Sbjct: 409 WPQVKALAMYMASTEVHTYAFSVAANVILSLFPFIVLLLTLAQKVFHSPAMVAVVGDLLR 468
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
I + ++ P S + S+ L ++LN + V E R++
Sbjct: 469 TILPNNQDFIVRNMTSLVH-PHGSTRVFSVVMLLITSTGVFLPLEVALNNVWGVKENRNY 527
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+++S G + + ++ + ++
Sbjct: 528 LQNQMVSLGLAAAVGALAMASVALATGQQRITTWIFFGHTDNIFFNFLAGGVLKICAVVM 587
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ ++ LP K M++LP I +SW V L+ + + ++Y
Sbjct: 588 SVLLFFLIYWVLPHRKIPAMAVLPTAIVIGLSWEVAKYLYVLALPHL-DFESVYGPFKVS 646
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ +++ ++ G+ + GA +A+ ++
Sbjct: 647 VGLMMWAFLSGLMLLAGAHFSATRYTLRLARE 678
>gi|327470720|gb|EGF16176.1| ribonuclease BN [Streptococcus sanguinis SK330]
Length = 308
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLREFFRFYKESDSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VTDFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKIMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKRRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRIMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKIDSQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMLYYFLPNVKINKKRFVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|318060033|ref|ZP_07978756.1| hypothetical protein SSA3_18965 [Streptomyces sp. SA3_actG]
Length = 298
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 100/276 (36%), Gaps = 3/276 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M Y + + +D A+ ++ A+L++ P ++ +A L
Sbjct: 1 MLRYAADWWPALRRTPLSLWNDDVTDDAAALTYYAMLALLPALLVTV-VASALLGPDTAR 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNR 118
T+I + P + D + ++L A L +A + + + + R SL+R
Sbjct: 60 TLIAYLTDYAPGQAGPQLHDLLTRMLTENATAWPLIATGVFSAFWSACSYLAVFRRSLHR 119
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+R + R+ L LV+ + + V + + + + L
Sbjct: 120 MHRTTDARTPVKRAHRIVLTALALLGLLVLTALLLVLSNPVVDAIGRALHLDEGVALAWR 179
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R A + + P + LPG + + W++ FT Y TY
Sbjct: 180 VLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPGGVLATVLWLLATAGFTLYTSLIGTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
S +Y LA + L++L++ + + GA+ A +
Sbjct: 240 SALYGSLAGSVVFLIWLWLSNLALLAGAQFAAELGK 275
>gi|225569108|ref|ZP_03778133.1| hypothetical protein CLOHYLEM_05188 [Clostridium hylemonae DSM
15053]
gi|225161907|gb|EEG74526.1| hypothetical protein CLOHYLEM_05188 [Clostridium hylemonae DSM
15053]
Length = 283
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 121/267 (45%), Gaps = 3/267 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + ++ + + ++ A A+ + +L + P I+ + + + V
Sbjct: 2 KSYRKLYKKGKEISQEVTDDHVGAYAAQSAFFFMLCLIPIILLLITMVQYTPVTKA--DV 59
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ V +P + IT + QV + G+ ++ + A + + GV A+ LN Y
Sbjct: 60 MTAVIRVFPSSVDSLITSIVNQVY-NQSSGIIPVTVIVALWSAGKGVLAMTGGLNCVYNC 118
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R++ + R+ + Y ++ + ++ + + V ++ + P L L + R+
Sbjct: 119 RETRNYLVLRIRATLYTVMFILVIIFLLVLSVFGNTLNIFIAEHIPILSGLADWLIRTRV 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
Y + L + + ++ FLP K + +PG +F I W++ + +F+ Y+ F +S MY
Sbjct: 179 YIMPVVLVVFSLLIYKFLPNRKDSLKKQIPGAVFAAIGWMIVSWIFSVYVDIFKGFSDMY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELN 269
L +I+ ++++Y +LG E+N
Sbjct: 239 GSLTTIVLIMLWMYFCMYSILLGGEIN 265
>gi|37523699|ref|NP_927076.1| ribonuclease [Gloeobacter violaceus PCC 7421]
gi|35214704|dbj|BAC92071.1| gll4130 [Gloeobacter violaceus PCC 7421]
Length = 381
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 98/276 (35%), Gaps = 11/276 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVF 67
D++ + + + + +A+ ++ S+ P +V +AGF G + + +
Sbjct: 23 LDLLKETGQEWSNDKVPRLAAALAYYTFFSLAPLLVVVIAVAGFFLGPDAVRGQLDNQIA 82
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRAYRVVEMR 126
G + A I + + + T AL A + S L+ +LN + V
Sbjct: 83 GLVGQQSASAIQELVKSAYHPASGFTATAIALGAILFGVSGLFGELQDALNTIWGVAPKP 142
Query: 127 SWYI-----TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R +SF V + +++ V + Y P G + ++
Sbjct: 143 DRSWVEVVKQRFVSFSMVFGIAFLMLVSLVVSAVVSAVTGYFGALLPMPGFVPGLVDVL- 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + ++ LP K + G T I +V+G L Y+ S++ +
Sbjct: 202 --VSVAITTLLFAMIYKVLPDVKIAWQDVAIGAAMTAILFVLGKSLIGLYLGQ-SSFGSS 258
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S++ LV++Y GAE Y
Sbjct: 259 YGAAGSLVVVLVWVYYTVQILFFGAEFTKVFAKKYG 294
>gi|150025898|ref|YP_001296724.1| hypothetical protein FP1855 [Flavobacterium psychrophilum JIP02/86]
gi|149772439|emb|CAL43921.1| Protein of unknown function YfkH [Flavobacterium psychrophilum
JIP02/86]
Length = 315
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 120/274 (43%), Gaps = 3/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++++I + V+ A+ ++ S +++FPF++F NL ++ F + V
Sbjct: 35 LYELIDFYLSGIVQGALSYRAAAVAWSFFMALFPFMLFILNLIPYIPITGFQEDFLGFVR 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I + I +L GL + + + + +NGV A+ + +VE R+
Sbjct: 95 ANVPPTTFDAIDNIINDILHNSHSGLLSTGGILSVFLMTNGVNAVMSGFETSQHIVEKRA 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA---LGNLLLIIWNGRIYA 184
++ ++ +L + L+I + + + + + + +I GR
Sbjct: 155 YFRQYFVALFISMLLTFILLITVSAIIIFEVFIQRTIIQDVLSSRISDKISLIEFGRYSF 214
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + + F K I GV+FT I ++ + F ++V FS Y+ +Y
Sbjct: 215 IIIMIIMSIGILFKFGIRQTRKRAFITIGVVFTTILIILSSYFFGIWVVRFSKYNELYGS 274
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ +++ + +L++ + +LG EL+AS+
Sbjct: 275 IGTLLIVMFYLWLNCMVLLLGFELDASIYKLKHH 308
>gi|318061298|ref|ZP_07980019.1| integral membrane protein [Streptomyces sp. SA3_actG]
Length = 411
Score = 115 bits (288), Expect = 7e-24, Method: Composition-based stats.
Identities = 44/262 (16%), Positives = 99/262 (37%), Gaps = 13/262 (4%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVIDVVFGAWPE 72
+E +A+ + LLSV P ++ L G++ F +D +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLCLVGLLGYVDAWTGADTIAGFEQHFLDASRAVLSD 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I + I + + + +I + A + S V ++ Y + +R TR
Sbjct: 61 QGVHDIAEPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITVMYGLDGVRGIVATR 120
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+SFG ++ + + + VA P + ++ + + ++ +
Sbjct: 121 LLSFGLFIVGLLVCSVALPLMVAGPDTVVHLLPWSGL------AVQILYWPVVIILCVVF 174
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L ++ +S + +PG W V + Y+ + T+Y LA+ + L
Sbjct: 175 LTTLYHVSVPVRSPWIEDVPGSFVALAMWFVCSFALRIYLTSTIEGPTIYGSLAAPVAVL 234
Query: 253 VFLYMLGVFFILGAELNASMII 274
+++ + ++GA +NA++
Sbjct: 235 LWIGVSAFAVLVGAAMNAAIDR 256
>gi|172062909|ref|YP_001810560.1| ribonuclease BN [Burkholderia ambifaria MC40-6]
gi|171995426|gb|ACB66344.1| ribonuclease BN [Burkholderia ambifaria MC40-6]
Length = 310
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 92/261 (35%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSHRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALSVIWPSTENRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + + ++ + + I ++ + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTVITFIGTWLLGDSPYVAITNVLQLVVGVAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A + G I + I + G LF Y+ T S + S
Sbjct: 203 GAFAVLMKFLPDAHVAWHDAVIGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY +LGAE A+
Sbjct: 262 LLMWLYFSAAVLLLGAEFAAA 282
>gi|331649343|ref|ZP_08350429.1| putative ribonuclease [Escherichia coli M605]
gi|331041841|gb|EGI13985.1| putative ribonuclease [Escherichia coli M605]
Length = 365
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 78 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 137
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 138 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 197
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 198 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 257
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 258 RLIGVAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 317
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 318 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 360
>gi|300771405|ref|ZP_07081281.1| probable ribonuclease BN [Sphingobacterium spiritivorum ATCC 33861]
gi|300762075|gb|EFK58895.1| probable ribonuclease BN [Sphingobacterium spiritivorum ATCC 33861]
Length = 336
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 57/280 (20%), Positives = 104/280 (37%), Gaps = 15/280 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------GAHQFVPTVID 64
++ + I F+++ M++ ++ + S+ P I+ GF G V
Sbjct: 16 LMMNVINGFLDDKCMKMSASLAYYTVFSIGPLIIIIIWCIGFFYGTQLDGPTGARDEVFK 75
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVV 123
+ + +A + I ++ + I + S+ ++ S+N ++V
Sbjct: 76 EFSELFGKDVAVQVQSTIQKISFENRSNIGIIVGIVTLIITSTTIFVDIQDSINTIWKVK 135
Query: 124 EMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
RLISF VL L+ + I Y ++F + L ++
Sbjct: 136 AKAKKGWLKLIINRLISFSMVLGLGFLLIASLMINGIIVALTNYFGQYFENIS--LPMLD 193
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T + F+ FLP AK + IL G IFT + ++ G + YI +T
Sbjct: 194 WINTGITFTVITALFGFIFSFLPDAKVRFRDILGGAIFTALLFMFGRYAISLYITQSATA 253
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
S Y SI+ L ++Y GAE + I Y +
Sbjct: 254 SA-YGAAGSIIVLLGWVYYSSAILYFGAEFTKEIAIRYGK 292
>gi|326334995|ref|ZP_08201195.1| YihY family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325692800|gb|EGD34739.1| YihY family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 304
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 110/276 (39%), Gaps = 3/276 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++D++ + AS IS S +++FPF++ NL ++ F
Sbjct: 30 KGRAFSLYDLLQLYTIGIIRGALTYRASAISYSFFVAIFPFLLVVLNLIPYIPIADFQDD 89
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ P D L + + GL + + + + ++NG+ A+ + +Y
Sbjct: 90 FWVFIDNLLPPGTHDFFKDIFLDIASKKRAGLLSTVFVLSIFLTTNGINAVFGGFDTSYH 149
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R IS G +L ++ ++++ FF L + +
Sbjct: 150 VHNTRGVVKQYFISMGVAMLLVFLILFSVILWLSFEYISRM--GFFETLEANRYLFLLAK 207
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ + + F A + I G + T + +++ F YI F+ Y+ +
Sbjct: 208 KIFFIFVTYLSISILFHFGSAER-GIRFFSAGSLLTLVLFILTTYGFGIYIENFAQYNQL 266
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + +++ L+++++ +LG ELNAS++
Sbjct: 267 YGSIGALLIFLLYIWLNSTILLLGFELNASLLKLKK 302
>gi|325696058|gb|EGD37949.1| ribonuclease BN [Streptococcus sanguinis SK160]
Length = 313
Score = 115 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 122/277 (44%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+++F + + + + E D + ++ L+SVFP ++ N+ + V
Sbjct: 12 KKFFAKIRRNQFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 69
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 70 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V + R R++S L + + F+ + ++L ++R ++ L + +
Sbjct: 130 YGVAKSRGLISHRVMSLFVSLGLQILFALTLFLTMFGHMSLDFLRTYWKLDNQLYQHLQH 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
LF L+ ++ FLP K K +LPG F ++ + +F+ Y+ + +
Sbjct: 190 FTEPLIYALLFAVLVMLYYFLPNVKIKKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNH 249
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + M+ I+GA LNAS+
Sbjct: 250 LVDVRFFSSIIMVVMMFWFIMIAKILIVGAVLNASIQ 286
>gi|325694920|gb|EGD36825.1| ribonuclease BN [Streptococcus sanguinis SK150]
Length = 308
Score = 115 bits (287), Expect = 8e-24, Method: Composition-based stats.
Identities = 59/267 (22%), Positives = 116/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLFVSLGLQILFAFALFLTMFGHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMLYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + M+ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIMIAKILIVGAVLNASIQ 281
>gi|259419076|ref|ZP_05742993.1| YihY family protein [Silicibacter sp. TrichCH4B]
gi|259345298|gb|EEW57152.1| YihY family protein [Silicibacter sp. TrichCH4B]
Length = 287
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 91/275 (33%), Positives = 148/275 (53%), Gaps = 4/275 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN----LAGFLGAHQFVPTVIDV 65
I+ A+ F ++ W ++SHI++S ++++FPF++F +A V V+D+
Sbjct: 12 RILRRALGRFGRKNAWVLSSHIAMSMMMALFPFVLFTVALSGAIASLFSHRVVVDDVVDL 71
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
VFG+WP+ +A+PIT E+ VL GL T+ + A YF+SNGV+A+RI++ RAY E
Sbjct: 72 VFGSWPQSVAEPITREVYAVLETSGTGLMTLGGVLALYFASNGVDAIRIAMLRAYGQEET 131
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++ RLIS G V++ L++ + + +PL +V +FFP L L
Sbjct: 132 RPFWKHRLISLGLVIMGGAGLLLTAVFELFLPLGARFVARFFPDLDFLRGWEHGANGLVV 191
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + HL L + + ILPG + T + W +F Y+ +F++YS YAGL
Sbjct: 192 AVIPVAAVFLYHLVLLPRRETVRHILPGAVVTLLLWWAAGTVFALYVSSFASYSATYAGL 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A M L+FLY+ ILGAE+N + ++
Sbjct: 252 AGAMAALIFLYLNAAILILGAEINGVLQTDRLAEE 286
>gi|148262616|ref|YP_001229322.1| putative ribonuclease BN [Geobacter uraniireducens Rf4]
gi|146396116|gb|ABQ24749.1| putative ribonuclease BN [Geobacter uraniireducens Rf4]
Length = 329
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 105/275 (38%), Gaps = 4/275 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+F + + F G+ ++ ++ LLSV P + + +
Sbjct: 40 RTSVRLFGFLLSVVRDFRRNQGFLLSGAVAYYTLLSVVPMSILALTALSHVIGEDELVHT 99
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ A +T+++ +V + + +I L +FSS L +++ +
Sbjct: 100 LATYLELVIPGYAATLTEQV-RVFVENRQVIGSIGFLVMLFFSSIAFTVLENAISVIFYH 158
Query: 123 V---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R + ++ LI F Y+ +V +V++S + A+ F +L
Sbjct: 159 HVLTKRRKFIVSALIPFLYISALAVGIVLVSVIVGAVETLENRHLIMFGRSLSLAGTTRV 218
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + L +L +P + + G I T + W + + Y + S +
Sbjct: 219 ALYVLGIGGEMLMLTSFYLVMPVVRITFRHAVIGGIITTVLWEIARRVLVWYYASLSMVN 278
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y +A+++ L+ + + + +LGA++ A +
Sbjct: 279 VIYGSIATVVVTLLSIEVSALILLLGAQVIAELER 313
>gi|149278657|ref|ZP_01884793.1| hypothetical protein PBAL39_23547 [Pedobacter sp. BAL39]
gi|149230652|gb|EDM36035.1| hypothetical protein PBAL39_23547 [Pedobacter sp. BAL39]
Length = 348
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 96/291 (32%), Gaps = 17/291 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F + + A + F+E+ +++ ++ + S+ P IV + A +
Sbjct: 10 FFKATYHLFIAAGKGFMEDRVMKLSAALAYYTIFSLAPLIVIVISAASIFLGDRLAINPN 69
Query: 64 DVVF-------GAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRIS 115
D +F A + + + + I ++ ++ S
Sbjct: 70 DELFGPSGEITQMIGGEAAAQLRSFVSNANYSGKSTLGLIIGITTLIIGATAIFIEIQDS 129
Query: 116 LNRAYRVVEMRSWYITRLI-----SFGYVLLASVTLVIMSFVFVAIPLALAYVRKF---F 167
+N ++V + +LI SF + L++ + + + +
Sbjct: 130 INLIWKVKAVPKKGWKKLITNRLLSFSLIASLGFLLLVSLVINSIVVGIGNKLTGYAAQV 189
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
L++ T+ + + LP K + G +FT + + VG
Sbjct: 190 GIEEVSQLLVVILTNALTLTVVAAIFTIIFKVLPDVNLKWKPAIVGALFTAVLFSVGKYA 249
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
YI + + +SI+ L+++Y + GAE + Y +
Sbjct: 250 IGIYIEK-GNPGSAFGAASSIIVILLWIYYTSIILYFGAEFTQAYAEKYGK 299
>gi|309811250|ref|ZP_07705041.1| YihY family protein [Dermacoccus sp. Ellin185]
gi|308434790|gb|EFP58631.1| YihY family protein [Dermacoccus sp. Ellin185]
Length = 389
Score = 115 bits (287), Expect = 9e-24, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 104/274 (37%), Gaps = 14/274 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTV 62
++ + + + +AS ALLS P + + G++G V ++
Sbjct: 32 RLVLETLRQCMRYRVTGLASEAGFFALLSFPPLVYGLLGVMGYVGGALGGRTVDDIVRSI 91
Query: 63 IDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ G + + + L + +I L + + S + + +++ Y
Sbjct: 92 ERYLEGILSGEALQNVVMPTLHDALEGGRPDVVSIGFLLSLWSGSRMINVIVDTISIMYG 151
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+R R +S ++ + + + + V P L + L LL +
Sbjct: 152 QGGVRGIVRARALSVTLYFVSLLFIGAVLPLIVIGPDLLGRM------LPPGLLFLLTLY 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+G ++ ++ + LPG FT I+WV+ ++ ++ ++
Sbjct: 206 WPVVGAITIVGFATLYYIATPVRTPWVRDLPGAGFTLIAWVIISLFLRSWLSASVGGISI 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA+ + L++LY L + ++GA LN+++
Sbjct: 266 YGPLAAAIIALIWLYSLSIAVLIGAALNSAVARL 299
>gi|319441494|ref|ZP_07990650.1| ribonuclease BN [Corynebacterium variabile DSM 44702]
Length = 319
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 101/271 (37%), Gaps = 16/271 (5%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEIL 83
++ ALL++FP ++ ++ G + V +++ G PE + + +
Sbjct: 1 MDFVGSLAFRALLALFPGLIALVSILALFGQSEESVVRLLNQFEGVTPEDTWESVRPVLE 60
Query: 84 QVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+L P GL I + + +S ++ ++N Y + E R + L + +
Sbjct: 61 SILRAPQAGLGLVIGLVTTLWTASGFIKTFSRTMNAVYGISEGRGVFKWILQMYLLTAMF 120
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + V V + ++ + R + + +G+ ++ P
Sbjct: 121 LLLAAVGLIGSVVAGPVAEAVGELIHLETAVITVWRYVRWVLVIGVVVLGVGMLYRITPN 180
Query: 203 AKSK--------------IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + + G ++ V+ LF Y+ +++ Y LA +
Sbjct: 181 VRVRRTWGGRHFPWYLFWMRWFTVGATIAIVATVLATALFFLYVSKAGSFNATYGALAGV 240
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +++L+++ + GA +++ ++ +
Sbjct: 241 VVLMLWLFLVNASLVFGALIDSEVVRMRQLR 271
>gi|256845414|ref|ZP_05550872.1| ribonuclease BN [Fusobacterium sp. 3_1_36A2]
gi|256718973|gb|EEU32528.1| ribonuclease BN [Fusobacterium sp. 3_1_36A2]
Length = 416
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 97/262 (37%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 22 LKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAPLKG 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ + L + L + + S N + + + RS
Sbjct: 82 GTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSLIRK 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + +I++ + + + + ++ + + + ++++ I
Sbjct: 142 ISDYISFFIFLPLIFIILNGLILFL----------LSKIKEIVFLYYIIKNIFPLISMTI 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ V+L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 192 FFMAVYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIFIF 251
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILGA + +
Sbjct: 252 LIWVRICWFIVILGAHITYLIQ 273
>gi|238024278|ref|YP_002908510.1| YihY family protein [Burkholderia glumae BGR1]
gi|237878943|gb|ACR31275.1| YihY family protein [Burkholderia glumae BGR1]
Length = 301
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 55/262 (20%), Positives = 96/262 (36%), Gaps = 5/262 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA F E+ MA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFRRFSEDHCTTMAAAIAFYSAFSLAPMLVMVIAVAGWFFGADAARGEVFSQVHSLIGN 81
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + G +S L +S +L +L + E R +
Sbjct: 82 EAAAGVQTIVENAHRKGNAGGFAAAVSVLLLVVGASATFSSLNTALGVVWPAAEKRWSSM 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ +V ++ ++I + A + L
Sbjct: 142 FGLVRVRLISFGLVLGVAFLLIVSLMLDTAITFVGRWLWGNTPFVVIGNLLQFTAGIAIL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A L G I + + + G LF Y+ T S + S+
Sbjct: 202 AAAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSLA 260
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L++LY +LGAE A+
Sbjct: 261 VLLMWLYFSAAVLLLGAEFAAA 282
>gi|28377948|ref|NP_784840.1| integral membrane protein [Lactobacillus plantarum WCFS1]
gi|28270782|emb|CAD63687.1| integral membrane protein [Lactobacillus plantarum WCFS1]
Length = 306
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 120/282 (42%), Gaps = 6/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + + I + + + A ++ AL+S+ P I+ NL
Sbjct: 3 LKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKS--G 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ P + + ++ L+ + +I L + +S + A+R SLN AY
Sbjct: 61 QILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ TR+I+F L + +V ++ F L L + ++ N
Sbjct: 121 GVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQ 180
Query: 181 RI----YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 181 LLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
T Y + S++ + +L G+ + G +NAS+ ++
Sbjct: 241 KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEH 282
>gi|300768369|ref|ZP_07078271.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308180130|ref|YP_003924258.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ST-III]
gi|300494047|gb|EFK29213.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ATCC
14917]
gi|308045621|gb|ADN98164.1| ribonuclease BN [Lactobacillus plantarum subsp. plantarum ST-III]
Length = 309
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 121/283 (42%), Gaps = 6/283 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + + I + + + A ++ AL+S+ P I+ NL
Sbjct: 3 LKARYPKITKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKS--G 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ P + + ++ L+ + +I L + +S + A+R SLN AY
Sbjct: 61 QILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ TR+I+F L + +V ++ F L L + ++ N
Sbjct: 121 GVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQ 180
Query: 181 RI----YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 181 LLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T Y + S++ + +L G+ + G +NAS+ ++ K
Sbjct: 241 KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEHK 283
>gi|296446755|ref|ZP_06888694.1| ribonuclease BN [Methylosinus trichosporium OB3b]
gi|296255758|gb|EFH02846.1| ribonuclease BN [Methylosinus trichosporium OB3b]
Length = 273
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 102/261 (39%), Positives = 142/261 (54%), Gaps = 1/261 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I DA HF E DG+A+ASHI+L+ L+S+FPF++ LA G+ + ++
Sbjct: 2 RIPLDAFLHFNEGDGFAIASHIALTTLMSLFPFLIVVTALAATFGSTRLADEAGRLLLDV 61
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
WP +A PI EI +V P T AL + YF+S+G+E+LRI LNRAY E R W+
Sbjct: 62 WPSQVAAPIAGEIRRVATTPQGSALTAGALFSVYFASSGIESLRIGLNRAYEAQETRPWW 121
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ RL S YVL ++V L+I+S + V P+ ++F L + + R L L
Sbjct: 122 LLRLESIFYVLGSAVALLILSVLVVLWPIVTDVAARWFDWLPSFWTFVTLARFAIATLVL 181
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLASI 248
L +H +LPA + +I LPGV+ T W++ F Y+ F+ Y YAGLAS
Sbjct: 182 AAALFAIHNWLPAGRRRISETLPGVVVTLALWLIAGSAFGAYLSAFAERYVLTYAGLASA 241
Query: 249 MTCLVFLYMLGVFFILGAELN 269
M LVFLY V FI G ELN
Sbjct: 242 MIALVFLYFTAVIFIYGGELN 262
>gi|68171918|ref|ZP_00545237.1| Ribonuclease BN [Ehrlichia chaffeensis str. Sapulpa]
gi|88658113|ref|YP_507343.1| YihY family protein [Ehrlichia chaffeensis str. Arkansas]
gi|67998663|gb|EAM85396.1| Ribonuclease BN [Ehrlichia chaffeensis str. Sapulpa]
gi|88599570|gb|ABD45039.1| YihY family protein [Ehrlichia chaffeensis str. Arkansas]
Length = 274
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/282 (26%), Positives = 134/282 (47%), Gaps = 16/282 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------ 54
++E + IY A+ + DG A ++S LLS+FPF+VF L +
Sbjct: 2 LKEKIKCLLKCIYYAMVDMIRHDGIEHAGYLSFIILLSIFPFLVFFMALVSNVAQLLNHY 61
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+I ++ P + + I ++++ P L T++ + + +S+ VE +R
Sbjct: 62 DISINDKLIILINDNIPHEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRT 121
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
LN+A RV S+ RL+S L+ ++T++I + +P+ + K L
Sbjct: 122 ILNKACRVSSPPSYIFRRLLSIFQFLVITLTIIIAMVCIILLPVIYEMLNKDLGYL---- 177
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + L LFI + ++ +P K +M ++PG I + W + +FT YI T
Sbjct: 178 ------KYTVSELVLFISITLLYFIVPNIKQSLMDVIPGAILVTLLWTCSSFVFTWYIKT 231
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
F + +Y LASI+ L+F Y+L +FFI GAELN + +
Sbjct: 232 FHQLNIIYGSLASIIASLLFFYILSIFFIYGAELNYRLKNMF 273
>gi|254302999|ref|ZP_04970357.1| ribonuclease BN [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148323191|gb|EDK88441.1| ribonuclease BN [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 416
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 96/262 (36%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 22 LKRAYEKYQSANSSFWVTSLSFYTILAIVPMLAILVSLSSWFGAEDYIINHIKDIAPLKG 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + ++ + L + L + + S N + + + RS
Sbjct: 82 ETLELLTDFSNNLLMDARSGVLAGVGFLFLGWTFIQMFSLIEESFNEIWHIKKSRSLIRK 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + + ++ + + + + ++ + + + ++++ I
Sbjct: 142 ISDYISFFIFLPLLFITLNGLILFL----------LSKIKEIVFLYYIVKNIFPLISMTI 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P K++ I I++++ +F Y+T+Y G + I
Sbjct: 192 FFMALYLVMPNTMVKVLPAFIASIIVSIAFLLFQYIFILLQFLLIGYNTIYGGFSVIFIF 251
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILG + +
Sbjct: 252 LIWVRICWFIVILGVHITYLIQ 273
>gi|78062949|ref|YP_372857.1| ribonuclease BN [Burkholderia sp. 383]
gi|77970834|gb|ABB12213.1| Ribonuclease BN [Burkholderia sp. 383]
Length = 311
Score = 114 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFRRFSSDRCSAMAAGIAFFSAFSLAPMLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGLATLISFAALAIGASATFASLSAALSVIWPATENRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ +V + +++ + + + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTAITFVGTWLLGNSPYVIVTNLVQFFVGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G I + I + G LF Y+ T S + S
Sbjct: 203 AAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY+ + +LGAE A+
Sbjct: 262 LLMWLYVSAIVLLLGAEFAAA 282
>gi|256027382|ref|ZP_05441216.1| ribonuclease BN [Fusobacterium sp. D11]
gi|260494471|ref|ZP_05814601.1| ribonuclease BN [Fusobacterium sp. 3_1_33]
gi|289765346|ref|ZP_06524724.1| ribonuclease BN [Fusobacterium sp. D11]
gi|260197633|gb|EEW95150.1| ribonuclease BN [Fusobacterium sp. 3_1_33]
gi|289716901|gb|EFD80913.1| ribonuclease BN [Fusobacterium sp. D11]
Length = 416
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 96/262 (36%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 22 LKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAPLKG 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ + L + L + + S N + + + RS
Sbjct: 82 GTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSIIRK 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + +I++ + + + + ++ + + + ++++ I
Sbjct: 142 ISDYISFFIFLPLLFIILNGLVLFL----------LSKIKEIVFLYYIVKNIFPLISMTI 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 192 FFMALYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIFIF 251
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILG + +
Sbjct: 252 LIWVRICWFIVILGVHITYLIQ 273
>gi|126699181|ref|YP_001088078.1| putative membrane-associated ribonuclease [Clostridium difficile
630]
gi|115250618|emb|CAJ68442.1| putative membrane-associated ribonuclease BN-like (Rbn)
[Clostridium difficile]
Length = 279
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F I +I I + + ++ +S +LS+FPF++F + ++ I
Sbjct: 2 FGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHL-NKYIA 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ PE ++ I+ + +S + + S V+A+ +NRAY+V E
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAVSFVLTMWTFSRAVKAIIKGMNRAYKVKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS++ ISF + ++ V + + V ++ + I R
Sbjct: 121 TRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIFNLVGLDEIFIKIWDILRYTV 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + ++ + P K I PG IF +W + + L+++Y ++ Y +Y
Sbjct: 181 GIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+A I+ + ++Y ++G E+N+ + R +
Sbjct: 241 IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIRHE 276
>gi|313127667|ref|YP_004037937.1| membrane protein [Halogeometricum borinquense DSM 11551]
gi|312294032|gb|ADQ68492.1| predicted membrane protein [Halogeometricum borinquense DSM 11551]
Length = 428
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 89/274 (32%), Gaps = 18/274 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M ++ IE E + +A+ IS L+S+ P + G +A F+G
Sbjct: 1 MSVRIRNQISVVRSVIETIQEREVTFLAASISYYTLVSLVPLLTLGLVVASFVGGEALRA 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+D+ ++ + + L +S + + L I+ +R Y
Sbjct: 61 YVLDLAQQYLLPAGSEIVASALEDP--TGQGALSVVSLAVTLWGALKLFRGLDIAFSRIY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R L + T+ + V L + +
Sbjct: 119 GSETGGIVDQLRDGLIALGSLGAGTIGVALATTVVAIL--------------DIPFVGVL 164
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L + P A + LPG +F + W V +F Y T ++
Sbjct: 165 SPLLLFGLLIAAFFPFYYIFPDAGLTVREALPGTLFAAVGWAVLGAVFGIYASTAG--AS 222
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ L +I+ + + Y G+ + GA +NA +
Sbjct: 223 VAGALGAILLLVTWFYFSGILILTGAVINAVLAE 256
>gi|325105576|ref|YP_004275230.1| ribonuclease BN [Pedobacter saltans DSM 12145]
gi|324974424|gb|ADY53408.1| ribonuclease BN [Pedobacter saltans DSM 12145]
Length = 317
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 107/286 (37%), Gaps = 9/286 (3%)
Query: 1 MREYF---CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ 57
M+ F +F +I ++ F + G +++ +S + S+ P ++ +LAG +
Sbjct: 1 MKRLFSYIKTIFKLIIESFNSFNNDKGLKLSAALSYYTIFSLGPMLLVLLSLAGIFYEEE 60
Query: 58 FVP-TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ V D + G A I + + + + + ++ ++ S
Sbjct: 61 AIEGKVFDEIVGFVGADAAILIQSVLKNLALSGKSTFTIITGVVTLILGATGVFIEIQDS 120
Query: 116 LNRAYRVVEMRSWYITRL---ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+N +RV + +L + ++ ++ +++ + + +
Sbjct: 121 INLIWRVKAIPKKGWIKLIINRALSLSMVGALGFLLIVTLIINSLVTAFNDILSRFVPEQ 180
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L + I T + L I ++ LP A + S+ G IFT + +++G L YI
Sbjct: 181 TLFLFDYTNIGITFIVLVILFGIIYKVLPDATIRWRSVRSGAIFTSLLFMLGKYLIGLYI 240
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ ++Y +++ V++Y GAE Y
Sbjct: 241 GY-ASVGSVYGAAGTVVVIAVWVYYSAAILFFGAEFTKVYAGYKGE 285
>gi|328946554|gb|EGG40693.1| ribonuclease BN [Streptococcus sanguinis SK1087]
Length = 313
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + + E D + ++ L+SVFP ++ N+ + + + +
Sbjct: 22 QLLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--IADFLTAIKDM 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 80 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 140 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYALL 199
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG F + + +F+ Y+ + + +SI
Sbjct: 200 FSVLVMFYYFLPNVKINKKRYVLPGSAFVLLIILALLNIFSVYMDNYLNHLVDVRFFSSI 259
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + M+ I+GA LNAS+
Sbjct: 260 IMVVMMFWFIMIAKILIVGAVLNASIQ 286
>gi|322516266|ref|ZP_08069196.1| YihY family protein [Streptococcus vestibularis ATCC 49124]
gi|322125239|gb|EFX96612.1| YihY family protein [Streptococcus vestibularis ATCC 49124]
Length = 319
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 115/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + H+ + + ++ +L+VFP IV AN+ +L ++ +
Sbjct: 16 WRPLQLYLRHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNIDTT--DLLKFMNE 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ P + + + + P+ L +++L + + +L+ ++N+ Y E R
Sbjct: 74 HLPKQFYAPAANVVQDIFSTPSGQLLGVASLTGFWTMIKSLSSLQKAINKVYGASEHRDV 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I+ ++ L+ L + I L + + +P + +I N ++
Sbjct: 134 FISHIVGGFMSLVILFLLTFALMLSTIIQSVLRVITQTYPIGSKMTQLILNSIQPLSIAV 193
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G++ ++ LP K + I ++PG IFT + + LF Y++ + S
Sbjct: 194 VFLGMMVLYFVLPNVKIRKIRYVMPGTIFTTLVIGYLSNLFGTYVIRTLSRLVDIKLFGS 253
Query: 248 IMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L ILGA NA+ +
Sbjct: 254 IMIFVFMLWFIFLARILILGAVFNATYQELKQGE 287
>gi|254975207|ref|ZP_05271679.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-66c26]
gi|255092597|ref|ZP_05322075.1| putative membrane-associated ribonuclease [Clostridium difficile
CIP 107932]
gi|255100703|ref|ZP_05329680.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-63q42]
gi|255306592|ref|ZP_05350763.1| putative membrane-associated ribonuclease [Clostridium difficile
ATCC 43255]
gi|255314334|ref|ZP_05355917.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-76w55]
gi|255517013|ref|ZP_05384689.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-97b34]
gi|255650115|ref|ZP_05397017.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-37x79]
gi|260683242|ref|YP_003214527.1| putative membrane-associated ribonuclease [Clostridium difficile
CD196]
gi|260686838|ref|YP_003217971.1| putative membrane-associated ribonuclease [Clostridium difficile
R20291]
gi|306520120|ref|ZP_07406467.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-32g58]
gi|260209405|emb|CBA62875.1| putative membrane-associated ribonuclease [Clostridium difficile
CD196]
gi|260212854|emb|CBE04061.1| putative membrane-associated ribonuclease [Clostridium difficile
R20291]
Length = 279
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F I +I I + + ++ +S +LS+FPF++F + ++ I
Sbjct: 2 FGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHL-NKYIA 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ PE ++ I+ + +S + + S V+AL +NRAY+V E
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAVSFVLTMWTFSRAVKALIKGMNRAYKVKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS++ ISF + ++ V + + V ++ + I R
Sbjct: 121 TRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIFNLVGLDEIFIKIWDILRYTV 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + ++ + P K I PG IF +W + + L+++Y ++ Y +Y
Sbjct: 181 GIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+A I+ + ++Y ++G E+N+ + R +
Sbjct: 241 IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIRHE 276
>gi|255324235|ref|ZP_05365357.1| tRNA-processing ribonuclease BN [Corynebacterium tuberculostearicum
SK141]
gi|255298751|gb|EET78046.1| tRNA-processing ribonuclease BN [Corynebacterium tuberculostearicum
SK141]
Length = 427
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 105/284 (36%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVIDVVF 67
++ F + A+ ++ L++ P ++ ++A + + + +
Sbjct: 94 VVRRVWVDFFHDALMDRAATMTYFTLMAFAPTVLAAYSIATLIFSSRRAEVHELTSQFIA 153
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + ++ A+G +S L + + +S V A + N Y VE
Sbjct: 154 DYVPSSMTEQAEKLVGSIIGSTAQGTFALVVSVLISLFAASAYVRAFSRTANTVYGRVEG 213
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALGNLL 174
R T + +G ++ + VI+ F + ++ V G +
Sbjct: 214 RGIIRTWALMWGLTIVLVIGAVIVLFANLLRDTIVSGVIDPLAGKLDMQGTADFLGGIFM 273
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ R T++ + + ++ F P + + I G + + VV F Y
Sbjct: 274 PVWNWLRFPLTVVIVLSLIAILYHFSPNVRPARFRWITLGSVVALSTNVVVWGAFALYTQ 333
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ +++Y + IM + +++ ILG +L+A ++
Sbjct: 334 RFAG-ASVYGAFSLIMAVFMAVWLSNTMLILGIKLDAEILRAKE 376
>gi|119486031|ref|ZP_01620093.1| probable ribonuclease [Lyngbya sp. PCC 8106]
gi|119456806|gb|EAW37934.1| probable ribonuclease [Lyngbya sp. PCC 8106]
Length = 292
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/280 (13%), Positives = 100/280 (35%), Gaps = 11/280 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
++ ++ + + ++ +A+ +S + S+ P ++ + GF +G V
Sbjct: 3 LNTIWSLLKETFNEWQQDKVPILAAALSYYMIFSIAPILILVIAVVGFIVGEQIAQEEVF 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + A + + + I+ + + ++ L+ +LN + V
Sbjct: 63 AQLESFFGSENAASLRTILQNQFNPSSNITATIIAVVTIIFGATTVFAQLKQALNLIWGV 122
Query: 123 VEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ TR++S VL L++ + + A A++ + +
Sbjct: 123 EPKPGRGVKGFIQTRILSILMVLGIGFILLLSLIISSVLSGASAWLEQHLFIP---SFVW 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ + ++ LP + + G T + + +G L + Y+ S+
Sbjct: 180 SLVDLVISLSLTTLLFGQIYRVLPDVRIAWKDVAVGAGITAVLFTIGKSLISLYLGN-SS 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ Y S + LV+++ F+ GAE Y
Sbjct: 239 IGSAYGAAGSFVIVLVWIFYSTQIFLFGAEFTQVWSRRYG 278
>gi|312887237|ref|ZP_07746841.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
gi|311300549|gb|EFQ77614.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
Length = 320
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 54/289 (18%), Positives = 115/289 (39%), Gaps = 11/289 (3%)
Query: 1 MREYFCIV-----FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLG 54
M++YF I F I+ A F+++ ++ ++ + S+ P ++ +LA FLG
Sbjct: 2 MKKYFSIKALKNGFTILKAAFNSFMDDKALKYSASLAYYTIFSLAPLLLLLISLAAVFLG 61
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALR 113
V + G AK I D I + L + + +++ ++
Sbjct: 62 KDAIQGKVFSEINGIVGNDAAKQIQDMIKHLELSGESTLSVVVGVVTLIIGATSVFGEIQ 121
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYV---LLASVTLVIMSFVFVAIPLALAYVRKFFPAL 170
++N ++V +LI + L+ ++ +++ + V L R
Sbjct: 122 DTINIIWQVKAKPEKGWLKLIKDRLLSSSLIITLGFLLLVSLVVNGALLALSDRLKNFLP 181
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
++++ I + + + + + LP AK ++ G IFT I +++G ++
Sbjct: 182 DITVILLSVINIVISFIVIAVLFGIIFKMLPDAKIAWKDVVSGAIFTAILFMIGRLVIGI 241
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
YI T S+ Y S++ L+++Y GAE + + K
Sbjct: 242 YIDQSGT-SSTYGAAGSLIVILLWIYYTAAILYFGAEFTRAYADFNGIK 289
>gi|225378186|ref|ZP_03755407.1| hypothetical protein ROSEINA2194_03846 [Roseburia inulinivorans DSM
16841]
gi|225209992|gb|EEG92346.1| hypothetical protein ROSEINA2194_03846 [Roseburia inulinivorans DSM
16841]
Length = 290
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 112/277 (40%), Gaps = 4/277 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + + + A ++ + +LS PF++ ++L + +
Sbjct: 4 RKLIWKIIGNGKSFFDKCKRDKINAYSAQSAFFIILSTIPFLMVFSSLLQYTPITEGT-- 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ I + + G+ +I+A+ A + ++ G++ + LN
Sbjct: 62 -LLKMYQTALPDYISAFLISITDEVYNRSVGIISITAIVAIWSAAKGIQYMTDGLNSVND 120
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ E R+W++ RL + Y ++ +V V V ++ P L +L +I R
Sbjct: 121 LEENRNWFVLRLWAIVYTIVFLFAVVFTLVVLVFGNTLHDLAVEYIPLLQSLTDLIVRLR 180
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ LF+ + LP K S +PG ++W V + + Y+ F+ +S M
Sbjct: 181 GFVLFGILFVFFDIIFTMLPNKKLTFKSQIPGAAICAVAWYVFSFALSIYVDYFNGFS-M 239
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L +I +++LY ++ AE+N + +
Sbjct: 240 YGSLTTIALIMLWLYFCMYIMMMSAEVNVIFNESFRK 276
>gi|256425588|ref|YP_003126241.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256040496|gb|ACU64040.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 322
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 110/285 (38%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ F F I+ A F+++ ++ ++ + S+ P ++ +LAG + + T
Sbjct: 9 KKSFKDYFTILKAAFTGFMDDMALKFSASLAYYTVFSLAPLLLLLISLAGVFLSRDVIQT 68
Query: 62 -VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRA 119
V + G A + + I + + I + ++ ++ S+N
Sbjct: 69 KVFSEINGIVGNEAALQVQEMIRNLEMTGKSTISVIIGVVTLIIGATTVFGEIQQSINII 128
Query: 120 YRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++V RL+S ++ L++ + A+ ++ F P + +
Sbjct: 129 WQVKPKPKKGWLKIIKDRLLSGSMIVTLGFLLLVSLVLNGALDAISDRLKHFLPDV--TV 186
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + + + I + LP AK + G FT + +++G ++ YI
Sbjct: 187 TLFTIISYIISFMIISILFGVIFKVLPDAKISWKDVRSGAFFTAVLFMIGRLVIGIYIEK 246
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T S+ Y S++ ++++Y GAE + + ++
Sbjct: 247 SAT-SSTYGAAGSLIVIMLWIYYTAAILYFGAEFTRAYADFNGKR 290
>gi|255655600|ref|ZP_05401009.1| putative membrane-associated ribonuclease [Clostridium difficile
QCD-23m63]
gi|296451602|ref|ZP_06893336.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP08]
gi|296878848|ref|ZP_06902848.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP07]
gi|296259520|gb|EFH06381.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP08]
gi|296430120|gb|EFH15967.1| probable membrane-associated ribonuclease [Clostridium difficile
NAP07]
Length = 279
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F I +I I + + ++ +S +LS+FPF++F + ++ I
Sbjct: 2 FGIDKKLIEYIIAKSNYSELSSKSAEVSFFLMLSIFPFLIFTISSIAYIPILHL-NKYIA 60
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ PE ++ I+ + +S + + S V+AL +NRAY+V E
Sbjct: 61 LFRNMMPEGAFAVLSSIIVSAIDNRNLKFLAVSFVLTMWTFSRAVKALIKGMNRAYKVKE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS++ ISF + ++ V + + V ++ + I R
Sbjct: 121 TRSFFKILSISFLFTIMLLVLIFLSMIFLVYGEKIGYFIFNLIGLDEIFIKIWDILRYTV 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + ++ + P K I PG IF +W + + L+++Y ++ Y +Y
Sbjct: 181 GIITIIVIFTLLYKYTPNKKLTIKESAPGAIFATFAWFLVSFLYSYYTNYYANYEVIYGS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+A I+ + ++Y ++G E+N+ + + +
Sbjct: 241 IAEIIVLMTWMYFSSWSIVIGYEVNSRLYFRKIKHE 276
>gi|163741955|ref|ZP_02149344.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
gi|161384676|gb|EDQ09056.1| ribonuclease BN, putative [Phaeobacter gallaeciensis 2.10]
Length = 285
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 8/257 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
G +A+ ++ LLSVFP I L G + + + P A+ +
Sbjct: 1 MGNAHGGLLAAGVAFYGLLSVFPGITAFVALFGLIADPTLITEQSTWLTSLLPSSAAELV 60
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVE---ALRISLNRAYRVVEMRSWYITRLIS 135
+++QV L +A +AA + ++ LN + E RS+ + +
Sbjct: 61 NQQLVQVAGARPDTLGWAAAASAALALWSASRSTDSVIQGLNVIFGTKEQRSFIVLK--- 117
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
++ + + + + + I A+ F L I R + G+
Sbjct: 118 -AVIVTITFAAICGALLLLLIVAAIPAAVALFGDSALLAGITQLLRWPLMFVVGIAGISL 176
Query: 196 VHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F P + PG I + WV G++ F+ Y+ F +Y+ + L+ ++ L +
Sbjct: 177 LYRFGPDRSGEGWQLFTPGAILSCTLWVAGSIGFSLYVQAFGSYNETFGALSGVILLLTW 236
Query: 255 LYMLGVFFILGAELNAS 271
+++ + GA L+A
Sbjct: 237 MWLSAFVILFGAGLDAE 253
>gi|300779712|ref|ZP_07089568.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300533822|gb|EFK54881.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 360
Score = 114 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 99/278 (35%), Gaps = 9/278 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
E F G A+ I+ ++LS+FP + GF + + + +
Sbjct: 42 HAMRMNERFGANGGNQFAAGITYFSVLSLFPLAMLLFAGLGFFLAARPDLLDQITEQISN 101
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMR 126
+ + I + + + I L + + LR ++ + E
Sbjct: 102 SVEGETGEMINSVVESAID-QRGAVAGIGLLTTLWSGLGWMNHLRSGISAMWNLDANEGG 160
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNGRIY 183
++ + + ++ V ++ V + +G+ ++W +
Sbjct: 161 NFVVKKFWDLIALIGLLVLFIVAFAVTAIGASSFTSTLMERLGIGDFPGARFLVWLVGLA 220
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+LA F+ ++ +F+P K + + L G + I + + F+ ++ +T + A
Sbjct: 221 VGILANFLVFWWMIVFMPRTKVPMRAGLKGALIGAIIFELLKQ-FSTVVIGSATGNPAGA 279
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
I++ +V LY++ + + A+ ++P
Sbjct: 280 IFGPIISLMVVLYLVWRIVLYVSAWTATYQESLALEEP 317
>gi|302538933|ref|ZP_07291275.1| ribonuclease BN [Streptomyces sp. C]
gi|302447828|gb|EFL19644.1| ribonuclease BN [Streptomyces sp. C]
Length = 326
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 86/272 (31%), Gaps = 4/272 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG++ + ++L +LS+ P + L+ L +
Sbjct: 42 WSLVRDSFIRFRYADGFSHSRALALQTVLSIVPLAIAVIGLSSTLHTEDIGRVAELTIRS 101
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL---RISLNRAYRVVEM 125
+ + + Q G L + N AL NR Y
Sbjct: 102 LASGPSRHVVDEALAQSRHRAGDGGLLALWLGLLFSVVNVTTALCQVERGANRIYGTERD 161
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + +LA + L + V V V + + + R
Sbjct: 162 RPFLSKYGRGLLMSVLAGLPLGLSFAVTVLGAHLSRAVAEVYHLGAGTIRAWDLLRWPVG 221
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + V P + G + W+ + Y+ +++++Y
Sbjct: 222 VLLALLATSAVFRLSPRRAQPGYTWLAFGATVYLVLWLTATWGLSAYVGAGGSFASVYGP 281
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L++ ++ L++ Y+ + LG A +
Sbjct: 282 LSAFVSLLLWSYLTSLALFLGLAFAAQLEAVR 313
>gi|295426440|ref|ZP_06819090.1| possible ribonuclease BN [Lactobacillus amylolyticus DSM 11664]
gi|295063808|gb|EFG54766.1| possible ribonuclease BN [Lactobacillus amylolyticus DSM 11664]
Length = 305
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/265 (21%), Positives = 116/265 (43%), Gaps = 8/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
E + + + I+ L S+FP I+ N+ + + D + +P+ ++K I
Sbjct: 23 LAEGEIFQSSIVIAYYILFSIFPIIIIVGNVLPLFHIN--TEPIADYLDLIFPDQVSKYI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ +NR Y V + ++ TR
Sbjct: 81 MPIINTLLKNNSTGYISFGIILAIWSFSNMVNAIRVGMNRLYGVHAVELKLSFLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ L + ++ V + L ++R + I++ R +L + +
Sbjct: 141 SFTILLTALMIIVFTAIALVMIFGQQVLEFLRPIMSISVGEIKKIFSYRYPVIILMMVVA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K + I PGVIFT +SW + LF Y+ F Y + + + +
Sbjct: 201 VAYLNYVLPNIKLRKRIIWPGVIFTVLSWSALSYLFGFYLHHFPISWENYGIIGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYYW 277
++L ++ + F+ G +NA++ +
Sbjct: 261 LWLNIISLLFLFGTSINATITRIKY 285
>gi|325267035|ref|ZP_08133705.1| ribonuclease II [Kingella denitrificans ATCC 33394]
gi|324981535|gb|EGC17177.1| ribonuclease II [Kingella denitrificans ATCC 33394]
Length = 400
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 89/267 (33%), Gaps = 11/267 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + F E + A ++ + LL++ P + + + +
Sbjct: 23 RFLRFVSQRFNEANILQTAGSLTFTTLLALVPLLTVILIVLAAFPMFGDISAHFMDLVHR 82
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ L A + + S ++ + +LNR +RV R W+
Sbjct: 83 IIVPSGASAIADYLDRFKEQAVRMTALGIAVMVVTSLLLIQTIDQTLNRIWRVQRGRPWW 142
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I+ + + + + + + I V + +L
Sbjct: 143 ISLTVYWALLTIGPLLVGISLSVSAYGLAQ-----------NTDYFFSSSLHFVGNVLGN 191
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ +P ++ + G + + F YI F++Y+ +Y + I
Sbjct: 192 AVFLFLLYRLVPNCHVPLLHAVSGALIIGLLLETAKYGFGIYISHFNSYAPVYGAFSIIP 251
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
LV+L +L + + GA + A + ++
Sbjct: 252 IFLVWLNLLWLIILSGALVIACIGDWH 278
>gi|33595551|ref|NP_883194.1| serum resistance protein [Bordetella parapertussis 12822]
gi|33565629|emb|CAE40275.1| serum resistance protein [Bordetella parapertussis]
Length = 296
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 97/280 (34%), Gaps = 6/280 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
+ + ++ D+ + + + +SL + S+ P ++ +AG F G
Sbjct: 10 PHLRDIGALLTDSAREWSRHRASSKGAALSLYMVFSLAPMLILVIAVAGAFFGEEAVRSE 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAY 120
+ V E A+ I + + L +S + ++ L+ SL+ +
Sbjct: 70 LFSQVRDLTGERGAEVIQTVLASAHESGSGWLAALLSICVLVFSATTAFAELKASLDELW 129
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E +S + S + L + + + + AL + ++ L +
Sbjct: 130 DVKEDKSGLQGLVRSRMLSFGLVLVLALFLLLSLTLNAALGAAKGYYGDLWSTSAFAMAA 189
Query: 181 RI---YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + V+ LP+ + + ++PG I T ++ G Y+ T
Sbjct: 190 DWLSNLFSFAVVTALFAVVYKLLPSKRIPWLDVIPGAIVTAALFLAGKWGIGLYLER-GT 248
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ Y S++ L+++Y F GA +
Sbjct: 249 AVSAYGAAGSLIALLLWIYYSAQIFFFGAVFTRQFAERFG 288
>gi|320108436|ref|YP_004184026.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319926957|gb|ADV84032.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 291
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 103/272 (37%), Gaps = 6/272 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + A + + A ++ SA+ +VFP ++ A L + + + + F
Sbjct: 14 EHVRRAYWNSFQNGCGTTAKAVAYSAVFAVFPALLVAAACINLLPDVAPLRSELAIFFDR 73
Query: 70 WPEVIAKPITDEIL---QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EM 125
P+ E A + + + + ++ + L R Y +
Sbjct: 74 VLPANVAPLLQEFFTGGDHRAPQSIRVLIGAGIVGFSGAAGVIATLMEGFRRTYDLPLNA 133
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF--FPALGNLLLIIWNGRIY 183
+ + R ++ V ++ + L I S + V L V ++ + R
Sbjct: 134 WTQWQRRGRAYLLVPISLIPLSIASVLVVFGHLITLMVMEWKQPQVQSLFYVTANIVRWT 193
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ A + ++ F + + + PG F I+W + V F Y+ F+ YS +Y
Sbjct: 194 VALSATASVIAMIYRFGTSKELGWHEVFPGAAFATITWFLTTVGFGWYVTRFADYSQVYG 253
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L + + +V++++ + + GAELNA +
Sbjct: 254 SLGTGIVLMVWMFLTALSVLCGAELNAELSRR 285
>gi|261381267|ref|ZP_05985840.1| YihY family protein [Neisseria subflava NJ9703]
gi|284795742|gb|EFC51089.1| YihY family protein [Neisseria subflava NJ9703]
Length = 400
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 96/269 (35%), Gaps = 16/269 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
+ + F +E +A++++ + LL++ P + +A Q+ + +
Sbjct: 18 FAWFVVRRFDDERVPQVAANMTFTTLLALVPVLTVMVVIASAFPVFDQWSGEFVSFINRT 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D I A L I ++ S + + + NR +RV R W
Sbjct: 78 IVPQGADMVFDYINAFRD-KATKLTAIGSVMLVVTSLMLIRTIDNAFNRIWRVNSQRPWM 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + + ++L + V + + RI + +
Sbjct: 137 MQFLVYWALLTFGPLSLGVGLSVVIGQVQVVGGSE--------------WLRIITAVSFI 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ F+P L G T LF Y+ F Y ++Y A++
Sbjct: 183 TMLLWGLYRFVPNRFVPASHALVGAAVTAFCLETARFLFAWYMGNFDGYKSIYGAFAAVP 242
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++L +L + GA L +S+ +
Sbjct: 243 FFLLWLNLLWTLVLGGAVLTSSLSYWRGE 271
>gi|121601639|ref|YP_988389.1| YihY family protein [Bartonella bacilliformis KC583]
gi|120613816|gb|ABM44417.1| YihY family protein [Bartonella bacilliformis KC583]
Length = 285
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 111/279 (39%), Positives = 172/279 (61%), Gaps = 1/279 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + I+ +AI H+ DG A ASH++LS LL+ FPF +FG AGF+GA + P
Sbjct: 1 MIRNISLCYHILINAISHYWRGDGSAFASHVALSGLLAFFPFFIFGTFFAGFIGAFTYTP 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+ I KP+ EI+ VL + + + T+S AAYF+SNG+EALR +LN+AY
Sbjct: 61 QKIAALVQLLPDAITKPLMKEIINVLTIQRRDVLTLSVFGAAYFASNGIEALRTALNKAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RVV+ RS+ R S +V++ ++ LV++SF V P+ + +++ P + + +I
Sbjct: 121 RVVDYRSFIFCRFQSLFFVIIGAIGLVVISFSLVLAPVLVKMMQQHSPFITEYVGVIRLW 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYS 239
R ++ I L+ VH +LPA K K++ ILPG++ T +W + ++ F HY+ T Y
Sbjct: 181 RYTIAIVISLISLLIVHKWLPAGKRKLIDILPGIVVTMFAWFLASMAFAHYLNLTMLNYV 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ YAGLASIM ++FLYML FILG E+NA++++Y R
Sbjct: 241 STYAGLASIMVAIIFLYMLSAIFILGGEINAAIMLYRDR 279
>gi|325690874|gb|EGD32875.1| ribonuclease BN [Streptococcus sanguinis SK115]
Length = 307
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 5/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ L + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTSLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDNQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMFYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMIIY 275
+ + + M+ I+GA LNAS+ Y
Sbjct: 255 IMVVMMFWFIMIAKILIVGAVLNASIQSY 283
>gi|257052610|ref|YP_003130443.1| ribonuclease BN [Halorhabdus utahensis DSM 12940]
gi|256691373|gb|ACV11710.1| ribonuclease BN [Halorhabdus utahensis DSM 12940]
Length = 469
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 38/258 (14%), Positives = 82/258 (31%), Gaps = 16/258 (6%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+A+ + A +SVFP ++ + LG V+ V +
Sbjct: 20 RRSRLSFLAAATAYYAFVSVFPLVLLVIAIGSLLGGDALAEAVLAAVSDVLSPSGRDVLR 79
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
D + + + L ++ Y E ++ +
Sbjct: 80 DALAS--GAGRGEATIVGVGVLFWSGLRVFRGLTLAFGTVYGTNEATTFLRQLRNA---- 133
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+ +A V +++ + +LAL + L+ +++
Sbjct: 134 ---------ALALVSLGFGVVAVVVGSVALSRTGVVLPGVAQPIGIVLALTVVLLPLYVV 184
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
+P I +PG + I W + +VLF Y + +Y + ++ + +LY
Sbjct: 185 VPDVPVGIREAIPGALTVAIGWTLLSVLFRLYAGNAGQFD-VYGVVGGVLLFVTWLYFGA 243
Query: 260 VFFILGAELNASMIIYYW 277
+LGA +NA +
Sbjct: 244 TILLLGAVVNAVLARDRQ 261
>gi|169333779|ref|ZP_02860972.1| hypothetical protein ANASTE_00163 [Anaerofustis stercorihominis DSM
17244]
gi|169259628|gb|EDS73594.1| hypothetical protein ANASTE_00163 [Anaerofustis stercorihominis DSM
17244]
Length = 295
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/272 (19%), Positives = 114/272 (41%), Gaps = 5/272 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
I +++ E+ + A+ + + S P I+ L +L +I +
Sbjct: 6 FLKDIKSSLDKLSEDFIYTFAAQSAFFMMFSFVPLIMIIVLLVQYLPL--TQEELISISI 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P+ +A ITD + + + ++ L + +S G+ ++ LN Y+ + R+
Sbjct: 64 HIFPQALAGFITDLFKGLYINYSGTVLLVTFLTLVWSASKGIYSISKGLNTIYKTKDERN 123
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R +S Y + + + + + + +++ +G+L + N
Sbjct: 124 YIQIRGVSLLYTICFGLIFLSVIILLIFGINIAKFLQSELFFIGDLHI---NYSYLGGFF 180
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + LP K I+ LPG IF+ W++ + L++ YI S +Y L++
Sbjct: 181 LLLAIFLITFCVLPKRKCHILKELPGAIFSSAGWIIFSWLYSLYITKVGANSLIYGSLSA 240
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++LY+ LG ELN + Y +K
Sbjct: 241 VILFMLWLYICMYIIFLGGELNVVLQTYDIKK 272
>gi|163869287|ref|YP_001610543.1| ribonuclease RNAse BN transmembrane protein [Bartonella tribocorum
CIP 105476]
gi|161018990|emb|CAK02548.1| ribonuclease RNAse bn transmembrane protein [Bartonella tribocorum
CIP 105476]
Length = 283
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 111/277 (40%), Positives = 169/277 (61%), Gaps = 1/277 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ F + I DAI H+ + G A ASH++LS LL+ FPF +FG A FLGA + P
Sbjct: 2 LKNIFWYSYRIFGDAISHYWRDSGSAFASHVALSGLLAFFPFFIFGTFFARFLGAFTYTP 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
I + P+VIA+P++ EI+ VL + G+ T+S + AYF+SNG+EALR +LN+AY
Sbjct: 62 QKIKALVQLLPDVIAEPLSQEIVNVLTLHQGGVLTLSIIGTAYFASNGIEALRTALNKAY 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + RSW+ R S +V+L + LV+MSF+ + PL + ++ + + +I
Sbjct: 122 RVTDRRSWFFCRFQSLFFVILGAFGLVVMSFLLILAPLLIKIMQNHPFFMTEYIGVIRLW 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R ++ LFI L+ VH +LPA + K + ILPG++ T W + ++ F Y+ F Y +
Sbjct: 182 RYTIAVVILFISLLIVHKWLPAGQRKFIDILPGIVVTMFVWFMASLAFAQYLTMF-DYIS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
YAGLASIM ++FLY+L FILG E+NA+++ Y
Sbjct: 241 TYAGLASIMVAIIFLYILSAIFILGGEINAAIMFYRN 277
>gi|303257859|ref|ZP_07343868.1| YihY family protein [Burkholderiales bacterium 1_1_47]
gi|331000482|ref|ZP_08324157.1| tRNA-processing ribonuclease BN family protein [Parasutterella
excrementihominis YIT 11859]
gi|302859202|gb|EFL82284.1| YihY family protein [Burkholderiales bacterium 1_1_47]
gi|329571814|gb|EGG53494.1| tRNA-processing ribonuclease BN family protein [Parasutterella
excrementihominis YIT 11859]
Length = 408
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 104/277 (37%), Gaps = 12/277 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+++ +E + +AS ++L+ LLS+ P + +
Sbjct: 15 LERMWNFGMFVMERIDKASLKQVASSLTLTTLLSIVPALAVIMAAFSAFPLFAPYREAFE 74
Query: 65 VVF--GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
PE + I I Q A A GL + + + + +LN Y V
Sbjct: 75 QFIFSTLLPEQYSDQILGYIKQF-ATQAAGLTAFGLIGLMVSALLCIATIDSALNSTYEV 133
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+++RS + L+ + + L V + I + G+L +
Sbjct: 134 LKLRSLWQRVLMYWALLTLGPVAIGISLAASSYLTGMA--------MSGHLSVYAQWLIP 185
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ I L ++ ++P + L G I + + V F Y++ +Y+T+Y
Sbjct: 186 IGQLIFQSIILAALYKYVPNCRVLWRDALVGGILIALVFTVFRWGFGIYVMR-GSYTTIY 244
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A+I L ++Y+ +F + GA + A++ + ++
Sbjct: 245 GAFAAIPVMLTWMYINWMFVLAGAAITATLPMLRAKR 281
>gi|332828640|gb|EGK01336.1| hypothetical protein HMPREF9455_02364 [Dysgonomonas gadei ATCC
BAA-286]
Length = 440
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/269 (18%), Positives = 104/269 (38%), Gaps = 7/269 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + AI + + AS ++ S LLS+ P + +A G V + +
Sbjct: 35 FYNIIKSFILAIRNIDGAQLFTRASALTYSTLLSIVPLLAVLFAIARGFGFQNIVKSQLF 94
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
F E++ K + I + Y N + + + N+ ++V
Sbjct: 95 SYFAGQEELLNKATAFIDKSIEYAQGGVFLGIGVILLLYTVINLLSNIEDNFNKMWQVKT 154
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS++ +++A V L+ + + + + L L+I
Sbjct: 155 GRSYFRMFTDYLALIIIAPVFLICNAGITILLNSTAEQ-------QYLLGLVISPMMKVI 207
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + +++++P K K S L G IFT I++ V +L+ + S Y+ +Y
Sbjct: 208 PFLITILLFTILYIYIPNTKVKFTSALFGGIFTGIAFQVFQMLYISGQIWISKYNAIYGS 267
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
A++ L++L + F + G +L+ +
Sbjct: 268 FAALPLLLLWLQLTWFFVLFGVQLSFAYQ 296
>gi|254253674|ref|ZP_04946991.1| Ribonuclease BN [Burkholderia dolosa AUO158]
gi|124898319|gb|EAY70162.1| Ribonuclease BN [Burkholderia dolosa AUO158]
Length = 312
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/261 (19%), Positives = 92/261 (35%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSADRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGIATLISFAALAVGASATFASLNTALSVIWPATESRWSSVL 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ +V + + I + + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTAITFVGTWLLGDSPYVAITNVLQFVVGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A G I + I + G LF Y+ T S + S
Sbjct: 203 AAFAALMKFLPDAHVAWHDAAIGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY +LGAE A+
Sbjct: 262 LLMWLYFSAAVLLLGAEFAAA 282
>gi|288550287|ref|ZP_05969860.2| putative ribonuclease [Enterobacter cancerogenus ATCC 35316]
gi|288315917|gb|EFC54855.1| putative ribonuclease [Enterobacter cancerogenus ATCC 35316]
Length = 343
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 95/286 (33%), Gaps = 11/286 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ + A E F + G + I+ + LS+ P ++ AGF+ + +
Sbjct: 54 RPMIAHLIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIF 113
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + + + + L A Y N + LR ++ R V
Sbjct: 114 NKILTNVSDQTLATTLKSTINTAVQQRTTVGIVGLLIALYSGVNWMGNLREAIRAQSRDV 173
Query: 124 EMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLL 175
R ++ F ++ V LV+ + A + + + L
Sbjct: 174 WERTPQDQEKIWVKYFRDFISLIGLLVALVVTLSITSVAGSAQQMIISALYLDYIDWLKP 233
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ ++ A ++ ++ LP + + +++ G + + V ++ T+ + +
Sbjct: 234 AWRGIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAVGFEVIKIVMTYTLPSL 293
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 294 VK-SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 338
>gi|170702800|ref|ZP_02893653.1| ribonuclease BN [Burkholderia ambifaria IOP40-10]
gi|170132288|gb|EDT00763.1| ribonuclease BN [Burkholderia ambifaria IOP40-10]
Length = 310
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSHRCSAMAASIAFFSAFSLAPTLVMVIAVAGWFYGDEAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLNTALSVIWPSTENRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ ++ + + I + + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGTWLLGDSPYVAITNVLQFVVGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ + G I + I + G LF Y+ T S + S
Sbjct: 203 AAFAVLMKFLPDARVAWHDAVIGGIVSAILFSGGKKLFALYLARAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY +LGAE A+
Sbjct: 262 LLMWLYFSAAVLLLGAEFAAA 282
>gi|254381748|ref|ZP_04997112.1| ribonuclease BN [Streptomyces sp. Mg1]
gi|194340657|gb|EDX21623.1| ribonuclease BN [Streptomyces sp. Mg1]
Length = 317
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 89/276 (32%), Gaps = 4/276 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + D+ F DG++ + ++L +LS+ P + L+ L +
Sbjct: 33 WSLARDSFIRFRYADGFSHSRALALQTVLSIVPLAIAAIGLSSVLHTEGVGRVAELTISR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL---RISLNRAYRVVEM 125
+ + + + + G L + N +L NR Y
Sbjct: 93 ITSGPSQQMVDEALRESRRHAGDGGQAALWLGLLFSLVNVTTSLCQVERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + LA + L + + V + + R
Sbjct: 153 RPFLLKYSRGLVMAALAGLPLGLSFVLTVLGSHLTHAFAEVYHFTPATTRAWDLLRWPVG 212
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + P + G + + W+V + Y+ S+++++Y
Sbjct: 213 VLLAVLATSAIFRLSPRRAQPGYTWLAFGAVVYLVLWLVATGALSLYVGASSSFTSVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++IM+ L++ Y+ + LG A + K
Sbjct: 273 LSAIMSLLLWSYLTSLALFLGLSFAAQLEAVRAGTK 308
>gi|284164911|ref|YP_003403190.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284014566|gb|ADB60517.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 397
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/262 (19%), Positives = 95/262 (36%), Gaps = 15/262 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ E++ MA+ I+ A +S+ P +V L F+G F V G
Sbjct: 9 LSFGKTVVGGIQEKNVPFMAASIAYQAFISLLPLLVLVFFLVTFVGGDAFADQVSTATEG 68
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ I + I + + G I + + S L + + Y S+
Sbjct: 69 FLPDSGQLLIENAIED--SPASAGSTIIGLVVLLWGSLKIFRGLDTAFSEIYGTTNENSF 126
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + F + L A V AL + + + +
Sbjct: 127 FDQIHDALIV------------FGVIGGALIFAAVATAIVALLPEIPFLGVAQSILLFVV 174
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L I ++ + P S ++PGV+ + W + LF Y+ F++ S L +I
Sbjct: 175 LAIAFFPMYYYFPDVGSSKRQVIPGVVVAALGWTLLQSLFRVYVS-FASSSESAGPLGAI 233
Query: 249 MTCLVFLYMLGVFFILGAELNA 270
+ L +LY G+ ++GA +NA
Sbjct: 234 LLLLTWLYFGGMILLVGAVINA 255
>gi|296328153|ref|ZP_06870684.1| ribonuclease BN [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296154665|gb|EFG95451.1| ribonuclease BN [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 416
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 93/262 (35%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA +V I +
Sbjct: 22 LKRAYEKYQRANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYVINQIKDIAPLKG 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ + L + L + + S N + + + RS
Sbjct: 82 GTLELLTDFSNNLLMNARSGVLAGVGFLFLGWTFIQMFSLIEESFNEIWHIKKSRSLIRK 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + + ++ + + + + + + + + ++++ I
Sbjct: 142 ISDYISFFIFLPLLFITLNGLTLLLLS----------KIKETIFLYYIVKNILPLISMTI 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P KI+ + I++++ +F Y T+Y G + I
Sbjct: 192 FFMALYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYDTVYGGFSVIFIF 251
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILG + +
Sbjct: 252 LIWVRICWFIVILGVHITYLIQ 273
>gi|19551908|ref|NP_599910.1| hypothetical protein NCgl0648 [Corynebacterium glutamicum ATCC
13032]
gi|62389567|ref|YP_224969.1| ribonuclease BN family membrane protein [Corynebacterium glutamicum
ATCC 13032]
gi|145294851|ref|YP_001137672.1| hypothetical protein cgR_0798 [Corynebacterium glutamicum R]
gi|21323444|dbj|BAB98071.1| tRNA-processing ribonuclease BN [Corynebacterium glutamicum ATCC
13032]
gi|41324901|emb|CAF19383.1| membrane protein ribonuclease BN-like family [Corynebacterium
glutamicum ATCC 13032]
gi|140844771|dbj|BAF53770.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 361
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 99/270 (36%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
FD + E F + G +++ I+ ++LS+FP + +AG + G + + + +
Sbjct: 37 WFDHLMRMNERFGAKGGNQLSAGITYFSVLSIFPIAMLVFGIAGVILAGNPEVLTDIQNR 96
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ A I + I + + I + A + + LR ++R + +
Sbjct: 97 INDALEGEIGNTVNGIIDSAI-AQRGAVLGIGGVTALWSGLGWMANLRFGVSRMWAIDPT 155
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL---GNLLLIIWNGR 181
++ +L +++ + + + + L F L + I W
Sbjct: 156 EGNFIQKKLTDLVALIVLLLAMGVAFGITALGASGLTKNLLDFVGLGEIPGISYITWVVA 215
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+LA F+ +++ LP K + L + I + V + + + +
Sbjct: 216 ALVGVLANFLVFMWLIFSLPRTKVPMKPGLQAALLGAIGFEVVKQVGSLLASNALS-NPA 274
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V LY++ + + A+
Sbjct: 275 GAAFGPIIGIMVVLYLIWRILMYCSAWAAT 304
>gi|330508907|ref|YP_004385335.1| YihY family protein [Methanosaeta concilii GP-6]
gi|328929715|gb|AEB69517.1| YihY family protein [Methanosaeta concilii GP-6]
Length = 347
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 100/304 (32%), Gaps = 27/304 (8%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ ++ E + W A+ I+ +L S+FP ++ L +
Sbjct: 27 RHSRGALRLLAATFSRMSETESWDAAAAIAYYSLFSLFPMLILLVILGTSFLQTKENYHQ 86
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVP-----------------------AKGLFTISAL 99
+ G + I + + + +
Sbjct: 87 LMNFIGGILPPAESLARENIQVIQDLGDKLNMHLPLKDLLQENVNQILHLRLPVGIAAGA 146
Query: 100 AAAYFSSNGVEALRISLNRAYRVVEMRS---WYITRLISFGYVLLASVTLVIMSFVFVAI 156
+ ++ L +++RA+ E R+ W + + G +L+ + L ++ + +
Sbjct: 147 GLLWSATGVFVILSKNIDRAWSNSEGRNPLEWRLVGIAMVGSLLIGLIILSMVVVSLIGL 206
Query: 157 PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
+ + ++ L + +FI ++ + P + G
Sbjct: 207 LDFSLGLLLGEGGVYHMPLESKLLYRLFPDVVIFIAFTILYWWAPKVDIRWSDAAFGAFV 266
Query: 217 TWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ W + + F Y+ S + +Y L +++ ++++Y+ G+ + GA L A M+
Sbjct: 267 ATLCWELSKMGFAWYLESGLSNHMLVYGSLGTVVILMLWIYLSGLICLFGAHLVAQMVGR 326
Query: 276 YWRK 279
K
Sbjct: 327 RQAK 330
>gi|253681524|ref|ZP_04862321.1| ribonuclease BN [Clostridium botulinum D str. 1873]
gi|253561236|gb|EES90688.1| ribonuclease BN [Clostridium botulinum D str. 1873]
Length = 271
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/237 (21%), Positives = 111/237 (46%), Gaps = 2/237 (0%)
Query: 39 VFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA 98
FPF++F +A + ++ + P+ + I +VL L + S
Sbjct: 37 FFPFLIFLFTIASYSSIQS--DRILFTLKNIIPQSAYTLVYSIINEVLQSRNANLLSFSF 94
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ + +SNG +A+ +LN+AY E RS+ + ++ ++ + ++ F+ V L
Sbjct: 95 IITIWIASNGFKAVIRALNKAYGEKEERSFIKLQFMAIITTIILTFLIIFSLFILVLGNL 154
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
+ FF NL I R + ++ + + ++ P K +LPG IF
Sbjct: 155 IGYKIMTFFSLPDNLFFIWNVFRYFLMLIFMILIFAVIYKLTPCRKLTFGEVLPGSIFAT 214
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
I W++ ++ F+ Y+ F+ YS +Y + +++ +++L++ + ++G E+NA ++
Sbjct: 215 IGWIIVSIGFSFYVDNFANYSRLYGSIGAVIILMIWLFLTSIIILIGGEINALLLKR 271
>gi|259047107|ref|ZP_05737508.1| ribonuclease [Granulicatella adiacens ATCC 49175]
gi|259036157|gb|EEW37412.1| ribonuclease [Granulicatella adiacens ATCC 49175]
Length = 306
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 120/281 (42%), Gaps = 6/281 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++++ ++ II E+ + + ++ ++ LLS+ P I+ AN+ L V
Sbjct: 16 LKKFGNRLWSIIQ---ENLMHVNIGVESAALTYYILLSIIPIIMLIANIIPLLPIP--VD 70
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +P I + + + L G ++ L + +S +L+ +LN Y
Sbjct: 71 VIFKTMRTIFPADINEVLIPILRNYLGNFNGGALSVGLLILFWPASQMFSSLQRALNVLY 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IWN 179
R++ R + + A + + +S +F+ L + +FF + +++
Sbjct: 131 GAPVRRNFIFERFFAIVIAMAAILMIFAVSVLFIFGEQFLRLIGEFFSLNLSTIILDFSF 190
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + +F+ L F++ +P K + LPG F I +V+ + LF+ YI
Sbjct: 191 IKWGMLFITVFLLLSFMYFAIPNVKWSFLYALPGGFFATIGFVLISQLFSIYIHYAGRNL 250
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
T +++ +++LY + ILG LN + + KK
Sbjct: 251 TANGAFGTLIVFMIWLYFIANVMILGGVLNVIIYRFRHPKK 291
>gi|300778688|ref|ZP_07088546.1| YihY family protein [Chryseobacterium gleum ATCC 35910]
gi|300504198|gb|EFK35338.1| YihY family protein [Chryseobacterium gleum ATCC 35910]
Length = 337
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 106/274 (38%), Gaps = 4/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + I + A+ IS S +S+FPFI+F ++ ++ + + I V
Sbjct: 28 LWQMFQIYISGIFKGKIGRKAAAISWSFTISLFPFILFLLSVLPYMPHYAKLQFYIFEVL 87
Query: 68 --GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+P + I I + KG+ ++ L A F++NG +L N E
Sbjct: 88 MHNVFPSNMEGDIRGYIEANIVPNMKGISNLTILLALLFATNGTFSLINGFNENSD--EK 145
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
S ++SF + + + F + + + + + +
Sbjct: 146 LSDVKEFILSFFITIGFITIVFLALFGVYYAEVVMRPFTPAYEITWLVDNLSKIIGFVSF 205
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L FI L + ++ +PG I T + +VV +F Y+ + Y+ +Y +
Sbjct: 206 PLFYFILLTLFYWLGTVKITRFRQAVPGAILTTVLFVVTTYIFAIYVKDIARYNVLYGSI 265
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ +V++ + + G ELN ++ K
Sbjct: 266 GSMILLMVWVNVNVYLLLFGNELNMAIRKLRIEK 299
>gi|163739520|ref|ZP_02146930.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
gi|161387273|gb|EDQ11632.1| ribonuclease BN, putative [Phaeobacter gallaeciensis BS107]
Length = 285
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 8/257 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
G +A+ ++ LLSVFP I L G + + + P A+ +
Sbjct: 1 MGNAHGGLLAAGVAFYGLLSVFPGITAFVALFGLIADPTLITEQSTWLTSLLPSSAAELV 60
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVE---ALRISLNRAYRVVEMRSWYITRLIS 135
+++QV L +A +AA + ++ LN + E RS+ + +
Sbjct: 61 NQQLVQVAGARPDTLGWAAAASAALALWSASRSTDSVIQGLNVIFGTKEQRSFIVLK--- 117
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
++ + + + + + I A+ F L I R + G+
Sbjct: 118 -AVIVTITFAAICGALLLLLIVAAIPAAVALFGDSALLAGITQLLRWPLMFVVGIAGISL 176
Query: 196 VHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ F P + PG I + WV G++ F+ Y+ F +Y+ + L+ ++ L +
Sbjct: 177 LYRFGPDRSGEGWQLFTPGAILSCTLWVAGSIGFSLYVQAFGSYNETFGALSGVILLLTW 236
Query: 255 LYMLGVFFILGAELNAS 271
+++ + GA L+A
Sbjct: 237 MWLSAFVILFGAGLDAE 253
>gi|297191204|ref|ZP_06908602.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297150821|gb|EDY62426.2| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 370
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 103/277 (37%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+V+ ++ D + +E +A+ + LLSV P ++ L G++ TV +
Sbjct: 29 KMVWLLLKDTVNSCIEYRILGLAAEAAFFTLLSVPPLMLGLIGLLGYIDDWTNTTTVASI 88
Query: 66 VFGAWPE--------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + V L +I A + S V ++
Sbjct: 89 EENILTAVGTVLSDRGVNDIAKPLLEDVTQGGRPDLISIGFAIALWSGSRAVNVFIDTIT 148
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++F ++A + ++ + V P + + ++
Sbjct: 149 VMYGLDGHRGIVATRLLAFLLYIVALLIGAVVLPLAVVGP------DRVVELMPWGTEVV 202
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
ML L ++ +S + +PG + W++G+ L Y+ +
Sbjct: 203 RILYWPVVMLLSIAFLTTLYHVSVPVRSPWVEDIPGALVALGMWILGSFLLRIYLTSQVE 262
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 263 GPTIYGSLAAPIAFLLWIGISAFAVLVGAAVNAAIDR 299
>gi|289424063|ref|ZP_06425849.1| putative membrane-associated ribonuclease [Peptostreptococcus
anaerobius 653-L]
gi|289155488|gb|EFD04167.1| putative membrane-associated ribonuclease [Peptostreptococcus
anaerobius 653-L]
Length = 282
Score = 113 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 113/275 (41%), Gaps = 6/275 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I I+ F D ++ A+ +S +S+FP ++F ++ V T +
Sbjct: 5 LNCIRALIQKFDIGDSYSRAAEMSFYLTMSIFPSLIFVICALAYVPEVNVVTTSEP-IKN 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + I + ++ L +SA A + S V ++ ++ N Y + ++
Sbjct: 64 IIPAEAHTIVVYFIKSAVTHKSQKLLIVSAGLAVWTFSKAVNSILVAQNAYYGFEDKKNP 123
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL----GNLLLIIWNGRIYA 184
I +L S + L + +++ V ++ + L +I R
Sbjct: 124 IIAKLTSLIFAALFFIEIILCIVFLVYGSKISEFIIGLLGNVEGSNMVLGIIFTIVRYLV 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + + ++ F P+ K LPG + T + W++ ++L++ Y F +Y
Sbjct: 184 PILVMIVIFLGIYSFGPSKKIPYKYCLPGAVVTSLLWLLFSMLYSVYANNFFN-GEIYGS 242
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++++ + +LY + +G ++NA + +
Sbjct: 243 ISTMIVLMTWLYFCSLSVSVGYKVNALIYFSKNEE 277
>gi|311740990|ref|ZP_07714815.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
gi|311303792|gb|EFQ79870.1| conserved hypothetical protein [Corynebacterium pseudogenitalium
ATCC 33035]
Length = 427
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 105/284 (36%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVIDVVF 67
++ F + A+ ++ L++ P ++ ++A + + + +
Sbjct: 94 VVRRVWADFFHDALMDRAATMTYFTLMAFAPTVLAAYSIATLIFSSRRAEVHELTSQFIA 153
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + + + ++ A+G +S L + + +S V A + N Y VE
Sbjct: 154 DYVPSSMTEQAEKLVGSIIGSTAQGTFALVVSVLISLFAASAYVRAFSRTANTVYGRVEG 213
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALGNLL 174
R T + +G ++ + VI+ F + ++ V G +
Sbjct: 214 RGIIRTWALMWGLTIVLVIGAVIVLFANLLRDTIVSGVIDPLAGKLEMQGTADFLGGIFM 273
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ R T++ + + ++ F P + + I G + + VV F Y
Sbjct: 274 PVWNWLRFPLTVVIVLSLIAILYHFSPNVRPARFRWITLGSVVALSTNVVVWGAFALYTQ 333
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ +++Y + IM + +++ ILG +L+A ++
Sbjct: 334 RFAG-ASVYGAFSLIMAVFMAVWLSNTMLILGIKLDAEILRAKE 376
>gi|302541789|ref|ZP_07294131.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC
53653]
gi|302459407|gb|EFL22500.1| putative integral membrane protein [Streptomyces himastatinicus
ATCC 53653]
Length = 390
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 101/274 (36%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G+ A TV +
Sbjct: 3 WLLLKDTVNSCMEYRVTGLAAEAAFFTLLSLPPLLLGLIGLLGYFDAWTDTDTVATIRQN 62
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + V+ + ++ A + S V ++ Y
Sbjct: 63 ILDASGTVLSDKGVKEIARPLLDDVIEGGRPDVISLGFGIALWSGSRAVNVFVDTITIMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F L+A V + + V P + + + ++
Sbjct: 123 GLEGRRGIVRTRLLAFLLYLVALVIGAVALPLMVIGPETV------VDFVPSSATLVRVL 176
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S +PG + WV+G+ L Y++ T
Sbjct: 177 YWPTVILLSVAFLTTLYHVSVPVRSAWREDIPGALVALTMWVLGSFLLRIYLIHTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 270
>gi|227541839|ref|ZP_03971888.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51866]
gi|227182282|gb|EEI63254.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51866]
Length = 361
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 105/272 (38%), Gaps = 8/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD I E + E G A+ I+ ++LS+FP ++ LAGF + + +
Sbjct: 35 WGWFDHIMRMNERYGEMGGNQYAAGITYFSVLSLFPLLMLAFGLAGFFLKNRPELLAQIE 94
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + + + + + + A +F+I AL A + + LR +++ +++
Sbjct: 95 EQITSSLSGELGETVNQVVSTAID-QAGAVFSIGALTALWSGLGWMNNLRFGVSQQWKID 153
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV----RKFFPALGNLLLIIWN 179
++ + LL + + ++F A+ + + + I
Sbjct: 154 PTGGNFVMNKLRDLLGLLGLMLTLSLAFGVTAVGSSGLTHRILELLQLEQVPGIGAITTI 213
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I + A F+ ++ ++P K+ + S G + + + V L + + + +
Sbjct: 214 VAIILGIGANFLVFFWLIKYMPRGKTPVKSAAQGALIGALIFEVFKQLGSMFFSNALS-N 272
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V LY + + + A+
Sbjct: 273 PAGATFGPIIGIMVLLYFIWRILLYCSAWAAT 304
>gi|119510788|ref|ZP_01629914.1| Ribonuclease BN [Nodularia spumigena CCY9414]
gi|119464551|gb|EAW45462.1| Ribonuclease BN [Nodularia spumigena CCY9414]
Length = 340
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 91/274 (33%), Gaps = 5/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVV 66
V+ + + ++ + E+ +A+ ++ + S+ P ++ +AG + ++ +
Sbjct: 6 VWTLFPETLKQWSEDKASRLAAALAYYTIFSIAPLLIIVIAIAGAAFGEEAARGEIVRQI 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRV--V 123
A+ + I A + +S + ++ L+ SLN + V
Sbjct: 66 EDLVGRDGAQFLEIAIKNASRPQAGAIASILSVVILLIGATGVFAELQDSLNTIWDVKAR 125
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R F + ++ V A + F AL + I
Sbjct: 126 PGRGIMTIIRQRFLSFTMILGIGFLLLVSLVISAGLSALITYFSNALPEIDSIWQMLNFI 185
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + LP + +L G + T + + +G L YI ST + Y
Sbjct: 186 LSFAITTVIFALIFKVLPDVRITWSDVLIGALLTSLLFSIGKFLLGQYIGR-STLGSAYG 244
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S++ + ++Y GAE Y
Sbjct: 245 AAGSLVVIIAWVYYAAQILFFGAEFTQVYSRRYG 278
>gi|296315119|ref|ZP_06865060.1| YihY family protein [Neisseria polysaccharea ATCC 43768]
gi|296838033|gb|EFH21971.1| YihY family protein [Neisseria polysaccharea ATCC 43768]
Length = 406
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 89/264 (33%), Gaps = 20/264 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGA 69
+ F EE A+ ++ + LL++ P + + + +
Sbjct: 19 FLLFVARRFSEERVPQAAASMTFTTLLALVPVLTVTVAAVSVFPVFENWSGAFVSFIKQT 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D + A L I ++ S V + + NR +RV R W
Sbjct: 79 VVPQGADKVLDYL-DAFRRQAGSLTAIGSVMLFVTSLMLVRTIDQAFNRIWRVGAQRPWM 137
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + + + L + + + W R A L
Sbjct: 138 MQFLVYWTLLTCGPLFLGVGISLTAGWGES------------------WLLRPLAMPLGT 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ F+P L G T + LF Y+ +F Y ++Y A++
Sbjct: 180 VLLLWGLYCFVPNRFVPARHALIGAAATALCLWCARALFVWYMGSFDGYRSIYGTFAAVP 239
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++L +L + GA L AS+
Sbjct: 240 FFLLWLNLLWTLVLGGAVLTASLS 263
>gi|322830850|ref|YP_004210877.1| ribonuclease [Rahnella sp. Y9602]
gi|321166051|gb|ADW71750.1| ribonuclease [Rahnella sp. Y9602]
Length = 374
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 95/276 (34%), Gaps = 11/276 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ A E F + G + I+ + LS+ P ++ GF+ + +I
Sbjct: 45 WGWVAHLLRATERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELI 104
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + + + + L A Y + + LR ++ R V
Sbjct: 105 NRIVNSISDPNLANTLKSTVNTAIQQRTAVGLSGLLIALYSGVSWMGNLREAIRAQSRDV 164
Query: 124 EMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLL 175
R+ Y + F + + L+I + A + + L
Sbjct: 165 WERNPQDQEKIYRRYIRDFISLTGLVLALIITLSLTSIAGAAQKTIVDALGLGGIDWLRP 224
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + + ++ A ++ +++ LP K + ++L G + + + V + T +
Sbjct: 225 VMTSITLVISIAANYLLFLWIFWMLPRHKPRKKALLRGTLLAAMGFEVIKFVMTMTLPKL 284
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+T S A S++ + F Y + A A+
Sbjct: 285 AT-SPSGAAFGSVIGLMAFFYFFARLTLFVAAWIAT 319
>gi|94496023|ref|ZP_01302602.1| hypothetical protein SKA58_15612 [Sphingomonas sp. SKA58]
gi|94424715|gb|EAT09737.1| hypothetical protein SKA58_15612 [Sphingomonas sp. SKA58]
Length = 321
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 112/268 (41%), Gaps = 2/268 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F++ + + G+ A +++ +L+++FPF + A +A G Q ++
Sbjct: 37 FEVAKRVLVGTYSD-GFIHAGNLAYLSLMTLFPFFIVAAAVASVFGRTQDGLQALNAFLY 95
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +A + I VL + L + L + + +E +R L RAY +++
Sbjct: 96 TVPRGVADVVRQPINDVLTARSGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTKSTKAF 155
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ RL + G L + ++ + V I ++ + P + + ++ + R+ +
Sbjct: 156 WQYRLSAIGITLFSVFAVMFAFSMQVVITGIDQFLVRLVPWADDAIALVASARLVPMAIV 215
Query: 189 LFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
P K + PG + T + W +L + Y Y LA
Sbjct: 216 CVALWSLFVALTPTAYKDRRFPKWPGAVATALWWYGTTLLLPPTLSLLGGYGRTYGSLAG 275
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+M L+F +++G+ ++GAELNA++ +
Sbjct: 276 VMITLIFFFLVGLGVVIGAELNAALAEF 303
>gi|186897334|ref|YP_001874446.1| ribonuclease [Yersinia pseudotuberculosis PB1/+]
gi|186700360|gb|ACC90989.1| ribonuclease [Yersinia pseudotuberculosis PB1/+]
Length = 360
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ +
Sbjct: 50 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAMVGFVLASNPDLLAELINKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + A Y + + LR ++ R V R+
Sbjct: 110 SISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNP 169
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F ++ V L+I + A A + + L +
Sbjct: 170 QDKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLI 229
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 230 ALSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SP 288
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 289 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 319
>gi|254556183|ref|YP_003062600.1| integral membrane protein [Lactobacillus plantarum JDM1]
gi|254045110|gb|ACT61903.1| integral membrane protein [Lactobacillus plantarum JDM1]
Length = 309
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 120/282 (42%), Gaps = 6/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ + + + I + + + A ++ AL+S+ P I+ NL
Sbjct: 3 LKARYPKIAKSLEIIIRRYGQANVSNNAIVLAYYALMSIAPIILIAGNLIARFDLKS--G 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ P + + ++ L+ + +I L + +S + A+R SLN AY
Sbjct: 61 QILAYAQEVIPSNVYQTFKPILVSFLSSGSSSSLSIGILVTVWSASKIIAAIRRSLNEAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + ++ TR+I+F L + +V ++ F L L + ++ N
Sbjct: 121 GVTDAQNAVWTRIIAFFLTLGLLLLIVGLAIFFTLSQLILDVILNLTNLTRAIIPNWINQ 180
Query: 181 RI----YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ T + +F+ + ++ F+P AK K+ I G + T I W+V + F YI F+
Sbjct: 181 LLENKNLITFVGMFVVAMLLYYFVPNAKVKLRYIWTGALVTTIGWIVISQGFRVYIELFA 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
T Y + S++ + +L G+ + G +NAS+ ++
Sbjct: 241 KRITTYQTIGSLIVLMFWLNFSGILLMFGGVVNASVQEWFEH 282
>gi|34762413|ref|ZP_00143414.1| Ribonuclease BN [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
gi|27887938|gb|EAA25005.1| Ribonuclease BN [Fusobacterium nucleatum subsp. vincentii ATCC
49256]
Length = 396
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 98/262 (37%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 2 LKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAPLKG 61
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ + L + L + + S N + + + RS
Sbjct: 62 GTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSLIRK 121
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + +T +I++ + + + + ++ + + + ++++ I
Sbjct: 122 ISDYISFFIFLPLTFIILNGLILFL----------LSKIKEIVFLYYIIKNILPLISMTI 171
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ V+L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 172 FFMAVYLVMPNTMVKIIPAFIASVIVSIAFLIFQYIFILLQFLLIGYNTVYGGFSVIFIF 231
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILGA + +
Sbjct: 232 LIWVRICWFIVILGAHITYLIQ 253
>gi|325285231|ref|YP_004261021.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
gi|324320685|gb|ADY28150.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
Length = 328
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 52/287 (18%), Positives = 117/287 (40%), Gaps = 16/287 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--------GAHQFV 59
++D++ + ++ AS I+ S +++FP ++F L FL
Sbjct: 35 LYDLLELYLNGILKGTLSTRASAIAFSLFMALFPLLIFLVTLIPFLIPYVDSGNPDTNLN 94
Query: 60 PTVIDVVFGAWPEVIAKPITDEI-LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
I + P I D+I ++++ GL + + + + + +NGV A+
Sbjct: 95 TEFIAYLEYVLPNAINDYFFDQIYDEIMSQKRGGLLSSTFVLSIFLIANGVNAIFSGFEN 154
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL-------AYVRKFFPALG 171
+Y V R + L + LL S+ +++ + V++ + + V
Sbjct: 155 SYHVSLNRHFLRQYLYALMVGLLLSILIIVSAIVYMYFEIYVIENISDTTQVYFGTGLEE 214
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ ++ ++ + ++ F A K G + T I +V+ + LF Y
Sbjct: 215 TDIWTTEIAKVVYFTFLSYLSISILYYFGTAEGKKTKFFSSGSLMTTILFVLTSYLFGVY 274
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ F+ Y+ +Y L ++ +V++++ +LG ELNA++ +
Sbjct: 275 VDKFARYNELYGALGGLLILMVYIWLNANILLLGFELNATLNSLKKK 321
>gi|156936315|ref|YP_001440231.1| hypothetical protein ESA_04215 [Cronobacter sakazakii ATCC BAA-894]
gi|156534569|gb|ABU79395.1| hypothetical protein ESA_04215 [Cronobacter sakazakii ATCC BAA-894]
Length = 344
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 100/282 (35%), Gaps = 12/282 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F E G + I+ + LS+ P ++ +AGF+ + + + +
Sbjct: 59 HLLRAFERFNERMGNQFGAAITYFSFLSMIPVLMVSFAVAGFVLASHPTLLQDIFNKILQ 118
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + + A Y N + LR ++ +R R
Sbjct: 119 SVSDPTLAKTLSSSINAAVEQRTTVGIVGFAVALYSGVNWMGYLREAIRAQFRDDWERGA 178
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWN 179
+++ L F ++ V LVI + A + + A+G L +
Sbjct: 179 EDDKEKFWVKYLRDFISLIGLLVALVITMSITSVAGSAQETIIRLLHLDAIGWLKPVWHL 238
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + A ++ ++ LP + + ++L G + I + V ++ T+ + + S
Sbjct: 239 IGLAVSFCANYLLFFWIFWRLPRHRPRRKALLRGTVIAAIGFEVIKIIMTYTLPSLVK-S 297
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + + A+ + P
Sbjct: 298 PSGAAFGSVLGLMAFFYFFARLTLFCSAWIATAQYKDDPQMP 339
>gi|312863911|ref|ZP_07724149.1| YihY family protein [Streptococcus vestibularis F0396]
gi|311101447|gb|EFQ59652.1| YihY family protein [Streptococcus vestibularis F0396]
Length = 313
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 115/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + H+ + + ++ +L+VFP IV AN+ +L ++ +
Sbjct: 10 WRPLQLYLRHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNIDTT--DLLKFMNE 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ P + + + + P+ L +++L + + +L+ ++N+ Y E R
Sbjct: 68 HLPKQFYAPAANVVQDIFSTPSGQLLGVASLTGFWTMIKSLSSLQKAINKVYGASEHRDV 127
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I+ ++ L+ L + I L + + +P + +I N ++
Sbjct: 128 FISHIVGGFMSLVILFLLTFALMLSTIIQSVLRVITQTYPIGSKMTQLILNSIQPLSIAV 187
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G++ ++ LP K + I ++PG IFT + + LF Y++ + S
Sbjct: 188 VFLGMMVLYFVLPNVKIRKIRYVMPGTIFTTLVIGYLSNLFGTYVIRTLSRLVDIKLFGS 247
Query: 248 IMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L ILGA NA+ +
Sbjct: 248 IMIFVFMLWFIFLARILILGAVFNATYQELKQGE 281
>gi|302338786|ref|YP_003803992.1| ribonuclease BN [Spirochaeta smaragdinae DSM 11293]
gi|301635971|gb|ADK81398.1| ribonuclease BN [Spirochaeta smaragdinae DSM 11293]
Length = 408
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/264 (15%), Positives = 89/264 (33%), Gaps = 9/264 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
+ ++ I I F+++ AS ++ S LL++ P ++ GA +
Sbjct: 3 WKSIYRTIRTVIREFLKDSCTLRASGLAFSTLLALVPLSATVFGISTAFGAFSSTEAQIK 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + I I V A L + + A S + + + ++ N +
Sbjct: 63 NFLINQLLPTRQQEILSTIE-VFVENANTLGIVGFMVFAVTSVSLLNGINVNFNAVWGSP 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ + ++ ++ L + + + L ++ G
Sbjct: 122 IKKGILLFFTNYTSIIVFGTIFLGASFTLTNTATQIIK-------GVPELFWLLKIGLRI 174
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A L F+ + + +P + S L G + I W V F S +Y
Sbjct: 175 APYLFTFLLFLIMIYVIPTGVVRKKSALVGALIGSILWEVAKYGFVKGTNYILRASIIYG 234
Query: 244 GLASIMTCLVFLYMLGVFFILGAE 267
+A+I L +LY++ + E
Sbjct: 235 SIATIPIFLFWLYLIWMIIFFSLE 258
>gi|290955198|ref|YP_003486380.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260644724|emb|CBG67809.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 321
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 92/273 (33%), Gaps = 6/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ DA F DG+ A ++ +L + PF + +A + + +
Sbjct: 34 RLLLDAFSRFRYADGFTNARSLAFQVVLGLVPFTIALVGVATTVHTESVGRIIELTLGQI 93
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF-----TISALAAAYFSSNGVEALRISLNRAYRVVE 124
P A + D + G++ + A ++ + + NR Y +
Sbjct: 94 VPGASAGLVEDALDGTARSAGSGVWGAVAMWVGLAFAVLNLASALGQVERGANRIYGIER 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + S L A + +V+ V VA + V + G+ L + +
Sbjct: 154 DRPFLHKYGRSLLLALAAGMPMVLGFLVLVAGDAVVNAVVQALGLPGDRLDWLRPLEVPL 213
Query: 185 TMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ ++ + + P + G + W+ L + Y+ ++ +Y
Sbjct: 214 GVALAWVASAVIFRWSPRRDQPGYTWLAFGSAVHLVLWITATWLLSLYVAESGSFGAVYG 273
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + GV LG A +
Sbjct: 274 PLTAFVALLLWANLTGVALFLGIAFAAQLEAAR 306
>gi|51598115|ref|YP_072306.1| hypothetical protein YPTB3825 [Yersinia pseudotuberculosis IP
32953]
gi|51591397|emb|CAH23063.1| putative membrane protein [Yersinia pseudotuberculosis IP 32953]
Length = 360
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ +
Sbjct: 50 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAMVGFVLASNPDLLAELINKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + A Y + + LR ++ R V R+
Sbjct: 110 SISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNP 169
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F ++ V L+I + A A + + L +
Sbjct: 170 QDKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLI 229
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 230 ALSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SP 288
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 289 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 319
>gi|227486998|ref|ZP_03917314.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51867]
gi|227093072|gb|EEI28384.1| ribonuclease [Corynebacterium glucuronolyticum ATCC 51867]
Length = 361
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 105/272 (38%), Gaps = 8/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD I E + E G A+ I+ ++LS+FP ++ LAGF + + +
Sbjct: 35 WGWFDHIMRMNERYGEMGGNQYAAGITYFSVLSLFPLLMLAFGLAGFFLKNRPELLAQIE 94
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + + + + + + A +F+I AL A + + LR +++ +++
Sbjct: 95 EQITSSLSGELGETVNQVVSTAID-QAGAVFSIGALTALWSGLGWMNNLRFGVSQQWKID 153
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV----RKFFPALGNLLLIIWN 179
++ + LL + + ++F A+ + + + I
Sbjct: 154 PTGGNFVMNKLRDLLGLLGLMLTLSLAFGVTAVGSSGLTHRILELLQLEQVPGIGAITTI 213
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I + A F+ ++ ++P K+ + S G + + + V L + + + +
Sbjct: 214 VAIILGIGANFLVFFWLIKYMPRGKTPVKSAAQGALIGALIFEVFKQLGSMFFSNALS-N 272
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V LY + + + A+
Sbjct: 273 PAGATFGPIIGIMVLLYFIWRILLYCSAWAAT 304
>gi|300362065|ref|ZP_07058242.1| ribonuclease BN [Lactobacillus gasseri JV-V03]
gi|300354684|gb|EFJ70555.1| ribonuclease BN [Lactobacillus gasseri JV-V03]
Length = 307
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/276 (19%), Positives = 109/276 (39%), Gaps = 8/276 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I +H + + + I+ LLS+FP I+ N+ + +
Sbjct: 14 NFIQLLSKHISQGEINQNSIIIAYYVLLSIFPIIIIIGNVLPLFSID--TKPIARYLELI 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+P ++ I + +L + G ++ + A + S V ++R+ N+ Y V +
Sbjct: 72 FPSQVSSLIMPIVNALLKKHSSGFISLGIVVAIWSLSCLVNSIRLGANKIYGVDKQEKGK 131
Query: 130 ITR------LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+F ++ V I+ F+F + ++ F + + N R
Sbjct: 132 SWWNYLLARTFTFALSVILVVGFSIIIFIFTFGRQIMEFLAPIFNLSLWWVYKLENYRWP 191
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L I ++++ +P + + + PGV FT ISW + F Y+ F T Y
Sbjct: 192 IIILMTVIVNLYINYVIPNIRVQKRVVWPGVWFTVISWSALSYFFGLYLRQFGTRWQNYG 251
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S + +++L + +LG +NA+ RK
Sbjct: 252 IVGSFIIFMLWLNVGSFLLLLGICINAAGDELKGRK 287
>gi|78188903|ref|YP_379241.1| ribonuclease BN [Chlorobium chlorochromatii CaD3]
gi|123579942|sp|Q3AS27|Y935_CHLCH RecName: Full=UPF0761 membrane protein Cag_0935
gi|78171102|gb|ABB28198.1| tRNA-processing RNAse BN [Chlorobium chlorochromatii CaD3]
Length = 432
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 29/274 (10%), Positives = 94/274 (34%), Gaps = 8/274 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPT 61
+ + + + + + + + A ++ LLS+ P + ++ F +
Sbjct: 19 KRYERMVAFVAFFRTNLLHDRIFISAGSLAFQTLLSIVPVLAVVLSVLNLFEVFTPFQHS 78
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + + +L+ + + + +L + + + + +LN +
Sbjct: 79 LETFLVENFMPATGRLLHGYLLEFVG-KTGNIPLLGSLLLFVIALSLLSTVDQTLNDIWG 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + + + L + +V + + F G L +
Sbjct: 138 IRAPRKALQGFTLYWTVLTLGPLLIVSSLAASSYVWYTI------FTDEGALFELKTRLL 191
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++ +P + +I G + + + F Y+ +T+ +
Sbjct: 192 ALFPFINSIVAFFLLYMLVPKRRVRIAHAFAGALVASLLLELSKRWFLFYVTHVATFEHI 251
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L+ + ++Y+ V ++GAE + +
Sbjct: 252 YGALSVVPMLFFWVYLAWVVVLVGAEFVYCLGAF 285
>gi|324993925|gb|EGC25844.1| ribonuclease BN [Streptococcus sanguinis SK405]
gi|327463187|gb|EGF09508.1| ribonuclease BN [Streptococcus sanguinis SK1]
Length = 308
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLRAFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + + +L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQHFTEPLIYASL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMLYYFLPNVKISKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|33594368|ref|NP_882012.1| serum resistance protein [Bordetella pertussis Tohama I]
gi|33599949|ref|NP_887509.1| serum resistance protein [Bordetella bronchiseptica RB50]
gi|562027|gb|AAA51647.1| BrkB [Bordetella pertussis]
gi|33564443|emb|CAE43754.1| serum resistance protein [Bordetella pertussis Tohama I]
gi|33567546|emb|CAE31459.1| serum resistance protein [Bordetella bronchiseptica RB50]
gi|332383779|gb|AEE68626.1| serum resistance protein [Bordetella pertussis CS]
Length = 296
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 97/280 (34%), Gaps = 6/280 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
+ + ++ D+ + + + +SL + S+ P ++ +AG F G
Sbjct: 10 PHLRDIGALLTDSAREWSRHRASSKGAALSLYMVFSLAPMLILVIAVAGAFFGEEAVRSE 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
+ V E A+ I + + L +S + ++ L+ SL+ +
Sbjct: 70 LFSQVRDLTGERGAEVIQTVLASAHESGSGWLAALLSICVLVFSATTAFAELKASLDELW 129
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E +S + S + L + + + + AL + ++ L +
Sbjct: 130 DVKEDKSGLQGLVRSRMLSFGLVLVLALFLLLSLTLNAALGAAKGYYGDLWSTSAFAMAA 189
Query: 181 RIY---ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + V+ LP+ + + ++PG I T ++ G Y+ +
Sbjct: 190 DWLSNLFSFAVVTALFAVVYKLLPSKRIPWLDVIPGAIVTAALFLAGKWGIGLYLGRGAA 249
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S Y S++ L+++Y F GA +
Sbjct: 250 VSA-YGAAGSLIALLLWIYYSAQIFFFGAVFTRQFAERFG 288
>gi|320184927|gb|EFW59712.1| Ribonuclease BN [Shigella flexneri CDC 796-83]
Length = 250
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 85/248 (34%), Gaps = 10/248 (4%)
Query: 34 SALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG 92
+LLS+ P + L V + +F + I I Q +A K
Sbjct: 2 WSLLSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNK- 60
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+ + A + + ++ +LN +R R + + + + L + +
Sbjct: 61 MTAVGACGLIVTALLLMYSIDSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAI 120
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ +L +I N +L +I ++ +P + +
Sbjct: 121 SSYLLSLR--------WASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIV 172
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G + + G F YI F +Y +Y LA I V++Y +LGAE+ ++
Sbjct: 173 GAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTL 232
Query: 273 IIYYWRKK 280
Y K+
Sbjct: 233 GEYRKLKQ 240
>gi|115380143|ref|ZP_01467176.1| ribonuclease BN, putative [Stigmatella aurantiaca DW4/3-1]
gi|310823548|ref|YP_003955906.1| ribonuclease bn [Stigmatella aurantiaca DW4/3-1]
gi|115362848|gb|EAU62050.1| ribonuclease BN, putative [Stigmatella aurantiaca DW4/3-1]
gi|309396620|gb|ADO74079.1| Ribonuclease BN [Stigmatella aurantiaca DW4/3-1]
Length = 456
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 100/277 (36%), Gaps = 10/277 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ +F F E+ A+ ++ ++ S+ P + G L L F +
Sbjct: 32 RFATDIFLGARAVARDFQGENISLRAAALTYISVFSLVPLLTVGLALLQALHQEGFQRRM 91
Query: 63 IDVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V A I + ++ + + L + + ++ +A + S + + + ++N +
Sbjct: 92 RSAVHLALAPGIREESSEFLDRFLNPAHSIAIGSVGFVALLFSSGSLLRHIDGAVNEVWG 151
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R I +LL + L A+ + I
Sbjct: 152 IRRQRPLLTRLSIYLLLLLLGPIFLAASFSGTSAVRALIVNAG---------FSIAPQIV 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ T L L ++ P AK + S L G + + + W++ L+ + Y +
Sbjct: 203 LVTTGLIAVSSLTLLYYGTPYAKVAVRSALAGGLVSGLGWILAKQLYEGFAEQTFRYDAL 262
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y L+++ ++Y+ + + GA L+ ++ +R
Sbjct: 263 YGSLSALPLFFAWIYVSWLIVLCGARLSYAVEHAAFR 299
>gi|281420162|ref|ZP_06251161.1| YihY family protein [Prevotella copri DSM 18205]
gi|281405962|gb|EFB36642.1| YihY family protein [Prevotella copri DSM 18205]
Length = 439
Score = 112 bits (281), Expect = 4e-23, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 99/277 (35%), Gaps = 5/277 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAM-ASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
R + A F +D WA + ++ ++ +++ PF+ +A G +
Sbjct: 26 RGRLKSWIKMGMLAGRIFYLKDMWARDVAALTFASFMALIPFMAMMFVIARGFGYASLLE 85
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + F A P V + + + + + Y + ++ + ++ N +
Sbjct: 86 SWLSTTFEAQPVVAQTIVNFVHNYIENTQSNYIIGTGIVMFLYTIVSLMQKIELTFNDIW 145
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E RSW + + ++ S + V + V + + I +
Sbjct: 146 HTGE-RSWKQIVTEYPTILFGLGLLILFASSINVWTVNMVDNVDRIADIGDTIPSFILHL 204
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +F+ +F + +P ++ S L + + + V S+Y+
Sbjct: 205 AAFVP---MFLFFVFCYYVIPNTYIRVCSTLVPSFLAGVCMTALQYGYIYLQVFLSSYNV 261
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y LA+I L++L + + GA L + ++
Sbjct: 262 IYGSLAAIPLFLLWLQISWAIVVFGALLCHTNQNIHY 298
>gi|260438511|ref|ZP_05792327.1| YihY family protein [Butyrivibrio crossotus DSM 2876]
gi|292809100|gb|EFF68305.1| YihY family protein [Butyrivibrio crossotus DSM 2876]
Length = 284
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/263 (19%), Positives = 112/263 (42%), Gaps = 2/263 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
F I + A A+ +L ++S P ++ + + + + +++ V
Sbjct: 2 KFFASIAAISTKIKHDKINAFAAESALFIIMSFIPCLILLMLIVKYTPLTEEL--ILNFV 59
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P T I + IS ++ + + G +L LN + + E R
Sbjct: 60 NDVVPSAFVPTATKHIHDAYTDANFTMILISGISLIWAAGKGFVSLIDGLNAVFNIKEHR 119
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+W++ RL + Y ++ V +++ ++V + + P + ++L I R +
Sbjct: 120 NWFVIRLYAILYTIIFLVIILLCVVIYVLGYRINDFFKVKAPVISDILDKILAFRALIVI 179
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + F+++ +P +KI PG +F+ + W + F+ Y S S +Y L
Sbjct: 180 FVLTVLFTFLYVAIPNRHTKIKRQFPGALFSAVGWTGFSFFFSLYFKYSSRLSEIYGSLT 239
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
+I+ +++LY+ F++GAE+N
Sbjct: 240 TIVCVMLWLYVCMYIFLMGAEIN 262
>gi|82546232|ref|YP_410179.1| ribonuclease BN [Shigella boydii Sb227]
gi|81247643|gb|ABB68351.1| tRNA processing exoribonuclease BN [Shigella boydii Sb227]
gi|332088239|gb|EGI93359.1| tRNA-processing ribonuclease BN [Shigella boydii 3594-74]
Length = 250
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 43/248 (17%), Positives = 86/248 (34%), Gaps = 10/248 (4%)
Query: 34 SALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAKPITDEILQVLAVPAKG 92
+LLS+ P + L V + +F + I I Q +A K
Sbjct: 2 WSLLSLVPLVAVVFALFAAFPMFSDVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNK- 60
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+ + A + + ++ +LN +R R + + + + L + +
Sbjct: 61 MTAVGACGLIVTALLLMYSIDSALNTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAI 120
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ +L +I N +L +I ++ +P + +
Sbjct: 121 SSYLLSLR--------WASDLNTVIDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIV 172
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G + + G F YI F +Y +Y LA I V++Y +LGAE+ ++
Sbjct: 173 GAFVAALLFEAGKKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTL 232
Query: 273 IIYYWRKK 280
Y+ K+
Sbjct: 233 GEYHKLKQ 240
>gi|25027253|ref|NP_737307.1| hypothetical protein CE0697 [Corynebacterium efficiens YS-314]
gi|259506610|ref|ZP_05749512.1| ribonuclease [Corynebacterium efficiens YS-314]
gi|23492534|dbj|BAC17507.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259165808|gb|EEW50362.1| ribonuclease [Corynebacterium efficiens YS-314]
Length = 361
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 109/270 (40%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
FD I E F + G +++ I+ ++LSVFP + G + GF+ G + V D
Sbjct: 37 WFDHIMRMQERFSSKGGNQLSAGITYFSVLSVFPIAMLGFAILGFVLAGNPDLLTRVQDA 96
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ GA+ + + + + + I L A + + LR ++R + +
Sbjct: 97 IAGAFDGEVGDTVNSVLESAI-AQRGAVLGIGGLTALWSGLGWMSNLRFGVSRMWSLDPT 155
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK----FFPALGNLLLIIWNGR 181
++ + ++ L+ + + ++F AI + + + +I W
Sbjct: 156 DGNFVLKKLNDLLGLILLLLALSIAFGITAIGASGLTTTLLEWVGLGDIPGISVITWAVA 215
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ LA F+ ++ FLP K + S + G + +++ V L + + + + +
Sbjct: 216 LLVGFLANFLVFFWLIKFLPRTKVPLKSAIQGALLGALAFEVVKQLASV-LASNALANPA 274
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V LY++ + + A+
Sbjct: 275 GATFGPIIGIMVVLYLVWRILMYCSAWAAT 304
>gi|237736906|ref|ZP_04567387.1| ribonuclease BN [Fusobacterium mortiferum ATCC 9817]
gi|229420768|gb|EEO35815.1| ribonuclease BN [Fusobacterium mortiferum ATCC 9817]
Length = 414
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 90/274 (32%), Gaps = 10/274 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + A+E + + + + +LS+ P +L + G ++
Sbjct: 16 QGKLNNIISVSKKALESYKRANSGLWVTSLCFYTILSLVPIFAILFSLGTWFGVADYLLV 75
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ E I IT + L I L + + + + N +R
Sbjct: 76 KLREYSPLNEESINLLITFAQNFLENTRTGILAGIGFLFLGWTLISMFAIIEKAFNDIWR 135
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + R + +L +VI S + I + LI+
Sbjct: 136 VEKSRMLLRKITDYISFFILFPTLMVISSGIVKIIGNRIGMEN----------LILTIFI 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L L +++ +P K + + L +F + + LF + Y+ +
Sbjct: 186 KFVPFLTLLFFFTIMYMLIPNTKVRFIPALISAMFIAMFFSGFQSLFLLLQDMVNAYNKI 245
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y + I L +L ++ F ILG+ L +
Sbjct: 246 YGSFSVIFIFLFWLKIMWFFIILGSHLCYFLQNR 279
>gi|289706024|ref|ZP_06502397.1| YihY family protein [Micrococcus luteus SK58]
gi|289557226|gb|EFD50544.1| YihY family protein [Micrococcus luteus SK58]
Length = 365
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 101/281 (35%), Gaps = 19/281 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGA 69
+ A++ F + G +A+ ++ +LS+ P ++ ++ + A + ++ + G
Sbjct: 38 LTRALKEFGNDGGTDLAAKLTYYLVLSLAPSLLAVFSILSLVLASNRGAIDDLLGQLTGL 97
Query: 70 WPEVIAKPITDEILQVLAVP----AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +T+ + + I A + +S V+A S N Y E
Sbjct: 98 VPSDYQPLVTNLVTTMSESAGSGGGIIALIIGIATALWSASAYVKAFNRSANTVYGYEEG 157
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALGNLL 174
R L + L+ V + ++ + + L
Sbjct: 158 RGLVKLTLTNLLTTLILIVGIAVVLLSLALNRSLVDGFLQPIAGPLGMTGVVNFLSDTFL 217
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIV 233
+ + +L L + + ++ P + + PG I + V+ AV + Y
Sbjct: 218 PVWAWVKWPVVVLILLVLIATLYYTTPNVQKPRFHLFGPGNIVALVGMVLAAVALSVYFT 277
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
F+ YS Y + +IM L L++ + +LG E++ +
Sbjct: 278 QFAGYSA-YGAIGTIMALLFALWIFNIVLLLGLEVDTEVER 317
>gi|15807590|ref|NP_296328.1| brkB protein [Deinococcus radiodurans R1]
gi|6460437|gb|AAF12146.1|AE002090_2 brkB protein, putative [Deinococcus radiodurans R1]
Length = 419
Score = 112 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 104/283 (36%), Gaps = 15/283 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--- 64
+F +I D+ + F ++ +A+ IS + S+ P ++F +AGF + V +
Sbjct: 28 LFGLIGDSAKAFGQDKAPRLAAAISYYGISSLAPLLLFAVAVAGFFLSDAKVVDQLFGPQ 87
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYR 121
V + A + + + + I+ + ++ L+ +LN +
Sbjct: 88 GSVAQSVGGDAADFLRGLVSNQKGLQRGSVIATLIAFVVTFMGATGLFVQLQDALNSMWG 147
Query: 122 VVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
TRLISF +L + L++ + + + ++
Sbjct: 148 ADPAPPQGIGKIVKTRLISFVLILAIGLVLLLFLALNTWLSALAHSLGDSLGVG---AVL 204
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ G + L L + FLPA K + +L G T + + +G +L Y +
Sbjct: 205 VRVGTFVLSALLLTPVFAAIFKFLPAVKLEWREVLVGGAVTAVLFSIGQILIGIYFGRAA 264
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S + ++ L ++Y + F GAEL + +
Sbjct: 265 PGSA-FGAAGVLVALLAWIYYSAMIFFFGAELTWVYSQKFGTR 306
>gi|298370006|ref|ZP_06981322.1| YihY family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281466|gb|EFI22955.1| YihY family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 408
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 103/274 (37%), Gaps = 9/274 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VID 64
+F + + F E +A+ ++ ++LL++ P + +A +
Sbjct: 13 GKLFGFAWFVVRRFNEVRVPQVAASLTFTSLLALVPVLTVAVVIASAFPVFDEWSNSFVG 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ A + D + Q A L I ++ S ++ + + NR +RV
Sbjct: 73 FINRTIVPQGADMVFDYLNQFR-AKASRLTAIGSVMLVVTSLLLIQTVDSTFNRIWRVSA 131
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + L+ + + ++L + + + + L+ ++
Sbjct: 132 QRPLLMQFLVYWALLTFGPLSLGVGLSLLFG-------LLHGSGLETSSPLLAGWLKVGV 184
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L FV+ F+P L G T + +LF Y+ F+ Y+++Y
Sbjct: 185 SVGCSTAVLWFVYCFVPNRYVPARQALAGAFLTAACLEIARILFAWYMGRFNGYTSIYGA 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
A++ L++L++L + GA L AS+ +
Sbjct: 245 FAAVPFFLLWLHLLWTLVLSGAVLTASLSYWQGE 278
>gi|228477289|ref|ZP_04061927.1| ribonuclease BN [Streptococcus salivarius SK126]
gi|228251308|gb|EEK10479.1| ribonuclease BN [Streptococcus salivarius SK126]
Length = 313
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 53/274 (19%), Positives = 114/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + H+ + ++ +L+VFP IV AN+ +L ++ +
Sbjct: 10 WRPLQVYLRHYRSAEIDISTIAVAYYLILTVFPLIVIAANVFPYLNIDTT--DLLKFMNE 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ P + + + + P+ L +++L + + +L+ ++N+ Y E R
Sbjct: 68 HLPKQFYAPAANVVQDIFSTPSGQLLGVASLTGFWTMIKSLSSLQKAINKVYGASEHRDV 127
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I+ +I L+ L + I L + + +P + +I N ++
Sbjct: 128 FISHIIGGFMSLVILFLLTFALMLSTIIQSVLRVINQTYPIGSKMTQLILNSIQPLSIAV 187
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G++ ++ LP K + I ++PG IFT + + LF Y++ + S
Sbjct: 188 VFLGMMVLYFVLPNVKIRKIRYVMPGTIFTTLVIGYLSNLFGTYVIRTLSRLVDIKLFGS 247
Query: 248 IMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L ILGA NA+ +
Sbjct: 248 IMIFVFMLWFIFLARILILGAVFNATYQELRQGE 281
>gi|238896971|ref|YP_002921716.1| hypothetical protein KP1_5213 [Klebsiella pneumoniae NTUH-K2044]
gi|238549298|dbj|BAH65649.1| hypothetical protein KP1_5213 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 343
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ AGF+ A + + D
Sbjct: 56 VIAHLLRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDK 115
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + L A Y N + LR ++ R V
Sbjct: 116 ILQNVSDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWE 175
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R ++ ++ V L+I + A + + + L
Sbjct: 176 RRPQDEEKIWVKYFRDLISLIGLLVALIITLSITSVAGSAQQMIISALYLDNIEWLKPAW 235
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + ++ G + I + + ++ T +
Sbjct: 236 RLIGLAISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVK 295
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ R+ P
Sbjct: 296 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMP 338
>gi|228473536|ref|ZP_04058289.1| ribonuclease BN [Capnocytophaga gingivalis ATCC 33624]
gi|228275143|gb|EEK13946.1| ribonuclease BN [Capnocytophaga gingivalis ATCC 33624]
Length = 306
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 104/273 (38%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++D++ V+ AS IS S +++FPF++ NL ++ F +
Sbjct: 35 LYDLLLLYTIGIVKGALTYRASAISYSFFVAIFPFLLVVLNLIPYIPIDDFQQDFWVFLD 94
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + GL + + + + ++NG+ A+ +Y V R
Sbjct: 95 SLLPPGTHGFFEEIFFDIAGKKRAGLLSTVFVLSIFLTTNGINAVFGGFEYSYHVRATRG 154
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
IS G +L ++ +++A F I + +
Sbjct: 155 ALKQYFISMGVAMLLVFLILFSVILWLAFEYIQGMKIFSFFNSNPYFFPIVKKVFFIFVA 214
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L + ++F + + G + T I +++ F YI F+ Y+ +Y + +
Sbjct: 215 YLVVSILFHFGTIDRGR---RFFSAGSLLTLILFILTTYGFGVYIENFAQYNQLYGSIGA 271
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ L+++++ +LG ELNAS+ K
Sbjct: 272 LLIFLLYIWLNATILLLGFELNASLSNLRRVKN 304
>gi|125718301|ref|YP_001035434.1| ribonuclease BN [Streptococcus sanguinis SK36]
gi|125498218|gb|ABN44884.1| Ribonuclease BN, putative [Streptococcus sanguinis SK36]
Length = 303
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 7/278 (2%)
Query: 1 MREYFCIVF--DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ F V + + E D + ++ L+SVFP ++ N+ +
Sbjct: 1 MKKLFGKVRNNQFLRAFFRFYKEADSELTSVAVAYYWLISVFPLLLIVVNILPYFHIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + PE + + + +VL P+ GL + S L+A + S + L+I+ N+
Sbjct: 59 VADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R R++S L + + F+ + ++L ++R ++ L +
Sbjct: 119 AYGVAKSRGLISHRVMSLFVSLGLQILFALTLFLTMFGHMSLDFLRTYWKLDSQLYQHLQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N LF L+ + FLP K K +LPG F ++ + +F+ Y+ +
Sbjct: 179 NFTEPLIYALLFAVLVMFYFFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLN 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+ +SI+ + + ++ I+GA LNAS+
Sbjct: 239 HLVDVRFFSSIIMVVMMFWFIIIAKILIVGAVLNASIQ 276
>gi|255036560|ref|YP_003087181.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
gi|254949316|gb|ACT94016.1| ribonuclease BN [Dyadobacter fermentans DSM 18053]
Length = 307
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 46/280 (16%), Positives = 99/280 (35%), Gaps = 10/280 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
+ + + ++ D+ F+ ++G +++ +S + S+ P ++ ++ F G
Sbjct: 2 KRIKLFWSLLQDSFNEFLNDNGMKLSAALSYYTIFSLAPMLLVIISVFSIFFGREAIQGE 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAY 120
+ + G A + D + GL I ++ ++ S+N +
Sbjct: 62 LFGQISGLVGASAASQLQDILKNAELSDKSGLAAGIGIGTLLIGATGVFAEMQDSINFIW 121
Query: 121 RVVEMRSWYITR-----LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + LISF +L LV+ + L A + F ++
Sbjct: 122 AIKSKPKKGWLQYLKNRLISFSLILTLGFLLVVSLGASALVDLLSARLEALFSEASVVVF 181
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I N + T++ + LP + + G FT +++G + + Y+
Sbjct: 182 YIVNLALVLTII--TALFTVIFKVLPDGDLRWKECIVGAAFTATLFLIGKFVISFYLGK- 238
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
S Y ASI+ L ++Y + GAE
Sbjct: 239 SDLGAAYGASASIVILLTWIYYSSIILYFGAEFTKVYARL 278
>gi|209523376|ref|ZP_03271931.1| ribonuclease BN [Arthrospira maxima CS-328]
gi|209496118|gb|EDZ96418.1| ribonuclease BN [Arthrospira maxima CS-328]
Length = 387
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 118/301 (39%), Gaps = 29/301 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVPTVIDVVF 67
+ I+ V++ + +++ ++ + L++ P + A ++ + + +++
Sbjct: 80 WQTIHSLGVRTVQQRLYGLSAEMAYHSTLALVPALFALLAAISSNPSLQSTLLEMANLLG 139
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-- 125
PE + K I + Q + LF+ S + + + S + + +LNR ++V
Sbjct: 140 EVVPEQVQKLIGATMSQSGRSLSPRLFSFSFIISIWLFSGVISSAMEALNRIHQVPPDKI 199
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK-------------------- 165
R + ++LI+ L + L++ S + + +
Sbjct: 200 RPVWKSKLIAIALTLGTLLLLIMASGAVFISDFLVEILARKSCILETVGNCPLDKIDMCL 259
Query: 166 ------FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
LL + T+ + ++ + P+ + ++PG I I
Sbjct: 260 AQEPVQDCLLQSTLLDTWNRLQWPITLGIVSTNFALIYRYGPSYRKPKTPLIPGSILAAI 319
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
W + + LF Y+ Y+ +Y L + + L++L + + +LGA+LN+++ R+
Sbjct: 320 FWALISNLFRWYVYQSEYYNVLYGALGTFIVLLLWLNISSLVVLLGAQLNSTVGDEIRRR 379
Query: 280 K 280
K
Sbjct: 380 K 380
>gi|254248683|ref|ZP_04942003.1| Ribonuclease BN [Burkholderia cenocepacia PC184]
gi|124875184|gb|EAY65174.1| Ribonuclease BN [Burkholderia cenocepacia PC184]
Length = 314
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGLATLISFAALAIGASATFASLSAALSVIWPATESRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ ++ + +++ + + + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGTWLLGDSPYVVVTNLVQFFVGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G I + I + G LF Y+ T S + S
Sbjct: 203 AAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY + +LGAE A+
Sbjct: 262 LLMWLYFSAIVLLLGAEFAAA 282
>gi|85715729|ref|ZP_01046708.1| hypothetical protein NB311A_13131 [Nitrobacter sp. Nb-311A]
gi|85697382|gb|EAQ35261.1| hypothetical protein NB311A_13131 [Nitrobacter sp. Nb-311A]
Length = 278
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 91/264 (34%), Gaps = 3/264 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAW 70
+ A + + ++ ++ S+ P IV +AG L H V+ +
Sbjct: 1 MKQAASDWSSHKDARQGAALAYYSVFSLGPIIVIAVAVAGLLFDHDVATAQVMSSIKDML 60
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ AK + + + + A + + V L+ +LN + V + +
Sbjct: 61 GDNGAKAVEAMLAGANRPATGIVASILGIGALLFAAIGVVVQLKDALNVVWEVEQSKESG 120
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + A+V + + + A + ++ + + + +
Sbjct: 121 LWHFARNYVLSFAAVLSLGFLLLVSLLVSAGLAAAGKHASAYLPEGVLHVVTMLVSFVVV 180
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + +LP + PG T + + +G + YI + Y ASI+
Sbjct: 181 MVLFAMIFKWLPDVSVGWRDVWPGAFLTAMFFEIGKAGISFYIGKQG-LESTYGAAASIV 239
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L+++Y ++GAE+ S
Sbjct: 240 VVLIWVYYTSQIILMGAEVTHSYA 263
>gi|330466601|ref|YP_004404344.1| ribonuclease bn [Verrucosispora maris AB-18-032]
gi|328809572|gb|AEB43744.1| ribonuclease bn [Verrucosispora maris AB-18-032]
Length = 338
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 91/276 (32%), Gaps = 8/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA F DG++ + + L+V PF++ L LGA + V D V
Sbjct: 33 WHLLRDAFTRFRYGDGFSHSRAFAFQLCLAVVPFLIALTGLIAELGAAEGGEVVADTVLA 92
Query: 69 AWPEVIAKPITDEILQVLAVPAK-------GLFTISALAAAYFSSNGVEALRISLNRAYR 121
P + + + + A+ T+ + ++ + + NR Y
Sbjct: 93 LTPGASEQVVAELLGDGEGAGAERAEDIGEVALTLGLMTGLVALTSTMAQIERGANRIYG 152
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V R L + + A + + + V V++ + R
Sbjct: 153 VERDRPALRKYLRAAVLAVTAGLPALAGFVILVGGGPMGDSVQRHYAWGDVAATGWDVIR 212
Query: 182 IYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ + + + P + + G + W + ++L Y+ + +
Sbjct: 213 WPLSLGLTVLAVAVLFRHAPRRHQPGLSWLFFGAGIATVLWWLASLLLAGYVRFSADFGQ 272
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L IM L++ + G+ G A +
Sbjct: 273 TYGALTGIMALLLWANLTGMALFGGLAFAAQLEAVR 308
>gi|323351282|ref|ZP_08086938.1| ribonuclease BN [Streptococcus sanguinis VMC66]
gi|322122506|gb|EFX94217.1| ribonuclease BN [Streptococcus sanguinis VMC66]
Length = 308
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 56/267 (20%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + + + +
Sbjct: 17 QFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIIVNILPYFHIP--IADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + + L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQHFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMLYYFLPNVKINKKRFVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|237742078|ref|ZP_04572559.1| ribonuclease BN [Fusobacterium sp. 4_1_13]
gi|229429726|gb|EEO39938.1| ribonuclease BN [Fusobacterium sp. 4_1_13]
Length = 396
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 98/262 (37%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 2 LKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAPLKG 61
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ + L + L + + S N + + + RS
Sbjct: 62 GTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSLIRK 121
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + +T +I++ + + + + ++ + + + ++++ I
Sbjct: 122 ISDYISFFIFLPLTFIILNGLILFL----------LSKIKEIVFLYYIIKNIFPLISMTI 171
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ V+L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 172 FFMAVYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIFIF 231
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILGA + +
Sbjct: 232 LIWVRICWFIVILGAHITYLIQ 253
>gi|22127715|ref|NP_671138.1| hypothetical protein y3844 [Yersinia pestis KIM 10]
gi|45443097|ref|NP_994636.1| hypothetical protein YP_3348 [Yersinia pestis biovar Microtus str.
91001]
gi|108809804|ref|YP_653720.1| hypothetical protein YPA_3813 [Yersinia pestis Antiqua]
gi|108813795|ref|YP_649562.1| hypothetical protein YPN_3635 [Yersinia pestis Nepal516]
gi|145600603|ref|YP_001164679.1| hypothetical protein YPDSF_3351 [Yersinia pestis Pestoides F]
gi|150261059|ref|ZP_01917787.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|165926990|ref|ZP_02222822.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165936966|ref|ZP_02225532.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166009533|ref|ZP_02230431.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166213438|ref|ZP_02239473.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167400543|ref|ZP_02306052.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167420968|ref|ZP_02312721.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167426638|ref|ZP_02318391.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167467308|ref|ZP_02332012.1| membrane protein [Yersinia pestis FV-1]
gi|218930980|ref|YP_002348855.1| hypothetical protein YPO3985 [Yersinia pestis CO92]
gi|229836434|ref|ZP_04456601.1| conserved inner membrane protein [Yersinia pestis Pestoides A]
gi|229839686|ref|ZP_04459845.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229841769|ref|ZP_04461925.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904307|ref|ZP_04519418.1| conserved inner membrane protein [Yersinia pestis Nepal516]
gi|270488085|ref|ZP_06205159.1| putative ribonuclease [Yersinia pestis KIM D27]
gi|294504290|ref|YP_003568352.1| hypothetical protein YPZ3_2180 [Yersinia pestis Z176003]
gi|21960836|gb|AAM87389.1|AE013988_3 hypothetical protein y3844 [Yersinia pestis KIM 10]
gi|45437964|gb|AAS63513.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108777443|gb|ABG19962.1| membrane protein [Yersinia pestis Nepal516]
gi|108781717|gb|ABG15775.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115349591|emb|CAL22565.1| putative membrane protein [Yersinia pestis CO92]
gi|145212299|gb|ABP41706.1| membrane protein [Yersinia pestis Pestoides F]
gi|149290467|gb|EDM40544.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|165915208|gb|EDR33819.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165921096|gb|EDR38320.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165991455|gb|EDR43756.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205379|gb|EDR49859.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166961097|gb|EDR57118.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167049911|gb|EDR61319.1| ribonuclease BN-like family protein [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167054413|gb|EDR64229.1| ribonuclease BN-like family protein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229678425|gb|EEO74530.1| conserved inner membrane protein [Yersinia pestis Nepal516]
gi|229691108|gb|EEO83161.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696052|gb|EEO86099.1| conserved inner membrane protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706502|gb|EEO92509.1| conserved inner membrane protein [Yersinia pestis Pestoides A]
gi|262363689|gb|ACY60410.1| hypothetical protein YPD4_3506 [Yersinia pestis D106004]
gi|270336589|gb|EFA47366.1| putative ribonuclease [Yersinia pestis KIM D27]
gi|294354749|gb|ADE65090.1| hypothetical protein YPZ3_2180 [Yersinia pestis Z176003]
gi|320017314|gb|ADW00886.1| conserved inner membrane protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 360
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ +
Sbjct: 50 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFVMVGFVLASNPDLLAELINKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + A Y + + LR ++ R V R+
Sbjct: 110 SISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNP 169
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+Y F ++ V L+I + A A + + L +
Sbjct: 170 QDKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGSIEWLRPAMTLI 229
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 230 ALSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SP 288
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 289 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 319
>gi|302525720|ref|ZP_07278062.1| ribonuclease BN [Streptomyces sp. AA4]
gi|302434615|gb|EFL06431.1| ribonuclease BN [Streptomyces sp. AA4]
Length = 412
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 103/279 (36%), Gaps = 9/279 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPT 61
+ ++ + + + ++ A+ + LS+ P ++ GF+G
Sbjct: 33 WRLLTRTLAKAWDGNIFSEAAEAAFWQTLSLPPLLLGLLGSVGFIGEWFGQNVVTAVHDR 92
Query: 62 VIDVVFGAWPEV-IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I + + + I + +L V + ++ + + + S+ + + ++ A+
Sbjct: 93 IITFSHTIFSANAVQEIIEPTVNSILTVGKGEIVSVGFVISLWAGSSAMSSFVDAITVAH 152
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+R+ R+ + L A + LVI + P L + +
Sbjct: 153 DQYGVRNEVWQRIFALLLYLCALIGLVIGLPLLAIGPDLLPEFFP-VDWRPTVSSWVGTL 211
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + L ++ + LPG + + ++V ++ Y+ +
Sbjct: 212 YYPVLGVMIALALTTLYKLALPRRLPWHRGLPGAMLAGVVFLVSSIGLRIYLNWITKTGY 271
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+ ++ +G+ + GA N+++ + K
Sbjct: 272 TYGALAAPIAFLLLMFFIGLAVVGGAYFNSAIQELWPAK 310
>gi|296122779|ref|YP_003630557.1| ribonuclease BN [Planctomyces limnophilus DSM 3776]
gi|296015119|gb|ADG68358.1| ribonuclease BN [Planctomyces limnophilus DSM 3776]
Length = 311
Score = 112 bits (280), Expect = 6e-23, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 92/272 (33%), Gaps = 5/272 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVP 60
R F V + DA ++ + + ++ A+LS+ P V L +G
Sbjct: 6 RLSFRAVVHVFVDAGREWLAHKCPRLGASLAFYAILSLAPLAVISVGLLSMIVGGEVARG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRA 119
V D + E A+ ++ + + TI + + L+ +LN
Sbjct: 66 EVTDQMREVVGEEAAQIVSSVVANTRKSTNGFIATTIGIITLVVGAMAVFVELQDALNTI 125
Query: 120 YRVVEMRS--WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ V R+ W+ F + +++ V + + + + ++
Sbjct: 126 WEVPPHRTTGWWRFIKDRFLSFFMIFGIGLLVLTSIVLSLIVTSLGKVATDIVPATQSLL 185
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + V +LP G + T I +++G + + Y+
Sbjct: 186 QFSDPSINFVVFVLLFAGVFRWLPDVSLTWRDTALGAVVTAILFLLGKIAISFYLHQSGV 245
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ Y SI+ LV++Y + GAEL
Sbjct: 246 GNA-YGAAGSIVVFLVWMYYSMQVLLFGAELT 276
>gi|309379635|emb|CBX21806.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 395
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 91/264 (34%), Gaps = 20/264 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
+ F EE A+ ++ + LL++ P + + + + V
Sbjct: 8 FLLFVARRFSEERVPQAAASMTFTTLLALVPVLTVTVAAVSVFPVFESWSGAFVSFVKQT 67
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D + A L I ++ S V + + NR +RV R W
Sbjct: 68 VVPQGADKVLDYL-DAFRRQAGSLTAIGSVMLFVTSLMLVRTIDQAFNRIWRVGAQRPWM 126
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + + + L + + + W R A L
Sbjct: 127 MQFLVYWALLTCGPLFLGVGISLTAGWGES------------------WLLRPLAMPLGT 168
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ F+P L G + T + LF Y+ +F Y ++Y A++
Sbjct: 169 VLLLWGLYCFVPNRFVPARHALIGAVATALCLWCARALFVWYMGSFDGYRSIYGAFAAVP 228
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++L +L + GA L AS+
Sbjct: 229 FFLLWLNLLWTLVLGGAVLTASLS 252
>gi|313668998|ref|YP_004049282.1| ribonuclease BN [Neisseria lactamica ST-640]
gi|313006460|emb|CBN87923.1| putative ribonuclease BN [Neisseria lactamica 020-06]
Length = 406
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 90/264 (34%), Gaps = 20/264 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
+ F EE A+ ++ + LL++ P + + + + V
Sbjct: 19 FLLFVARRFSEERVPQAAASMTFTTLLALVPVLTVTVAAVSVFPVFESWSGAFVSFVKQT 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D + A L I ++ S V + + NR +RV R W
Sbjct: 79 VVPQGADKVLDYL-DAFRRQAGSLTAIGSVMLFVTSLMLVRTIDQAFNRIWRVGAQRPWM 137
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + + + L + + + W R A L
Sbjct: 138 MQFLVYWTLLTCGPLFLGVGISLTAGWGES------------------WLLRPLAMPLGT 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ F+P L G T + LF Y+ +F Y ++Y A++
Sbjct: 180 VLLLWGLYCFVPNRFVPARHALIGAAATALCLWCARALFVWYMGSFDGYRSIYGAFAAVP 239
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++L +L + GA L AS+
Sbjct: 240 FFLLWLNLLWTLVLGGAVLTASLS 263
>gi|237744611|ref|ZP_04575092.1| ribonuclease BN [Fusobacterium sp. 7_1]
gi|229431840|gb|EEO42052.1| ribonuclease BN [Fusobacterium sp. 7_1]
Length = 396
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 96/262 (36%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 2 LKRAYEKYQSANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAPLKG 61
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ + L + L + + S N + + + RS
Sbjct: 62 GTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEASFNEIWHIKKSRSIIRK 121
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + +I++ + + + + ++ + + + ++++ I
Sbjct: 122 ISDYISFFIFLPLLFIILNGLVLFL----------LSKIKEIVFLYYIVKNIFPLISMTI 171
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 172 FFMALYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIFIF 231
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILG + +
Sbjct: 232 LIWVRICWFIVILGVHITYLIQ 253
>gi|33151912|ref|NP_873265.1| ribonuclease BN [Haemophilus ducreyi 35000HP]
gi|33148133|gb|AAP95654.1| ribonuclease BN [Haemophilus ducreyi 35000HP]
Length = 275
Score = 112 bits (280), Expect = 7e-23, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 98/266 (36%), Gaps = 6/266 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ + + A +++ + +L++ P ++ ++ F ++
Sbjct: 13 FFKCWQQNRISISAGYLTYNTMLALVPLVMVVFSVFTFFPIFTEATELLKTFVYDNFAPN 72
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + +E +++ ++ + +S L + + ++ SLN + RS ++ L+
Sbjct: 73 AGNVVEEYVELFVSNSQKMGLVSMLGLFIVAVMLISSIDQSLNDIWHNTRKRSLLLSFLL 132
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
++ A + + I + + YA L +++
Sbjct: 133 YILILIFAPLLAGASIAITTYIMSFEVFSEN------GIFSFSHYLLEYAPFLLVWLLFT 186
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
V+ +P G +F + +G F Y+VTF +Y +Y LA + +V+
Sbjct: 187 LVYWIVPNTTVAFRHATIGALFAASFFTLGKQAFIWYVVTFPSYQAIYGTLAVLPIMIVW 246
Query: 255 LYMLGVFFILGAELNASMIIYYWRKK 280
+++ +LG + A + K+
Sbjct: 247 IHLSWQVVLLGGQFAAVLKEINMLKE 272
>gi|320335535|ref|YP_004172246.1| ribonuclease BN [Deinococcus maricopensis DSM 21211]
gi|319756824|gb|ADV68581.1| ribonuclease BN [Deinococcus maricopensis DSM 21211]
Length = 401
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 98/287 (34%), Gaps = 19/287 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID- 64
+ ++ DA F ++ +A+ + + S+ P + F +AG+ +
Sbjct: 14 KDLLPVLRDAFMAFGQDRAPRLAAAFAYYTMFSLAPLLFFLLAIAGYFLGQSAFQEQLFG 73
Query: 65 ------VVFGAWPEVIAKPITDEI---LQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
++ + A + + L+ + + + ++ L+ +
Sbjct: 74 ANGHSGLLAQYFDAKTADFVKGLLASDNNQLSKGSGIATLVGFVTLFMGATGLFVQLQDA 133
Query: 116 LNRAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL 170
LN + TRL+SF V+L ++ V + + A
Sbjct: 134 LNSLWGADPAPRGGILQVIRTRLVSFAMVVLFGALIIAFLGVNTYLSAIAGRLGDVIGAG 193
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ + + + ++ FLP+ + + G T + + VG L +
Sbjct: 194 ---AFFVRLATLLLSAGMFTLAFAAMYRFLPSIRLSWRDVWVGAAVTAVLFAVGQTLISV 250
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S +++ S++ L+++Y G+ GAE+ + +
Sbjct: 251 YFARVSP-GSVFGAAGSLVVLLLWIYYSGMIVFFGAEVTWAYAQRFG 296
>gi|302866196|ref|YP_003834833.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|315502754|ref|YP_004081641.1| ribonuclease bn [Micromonospora sp. L5]
gi|302569055|gb|ADL45257.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|315409373|gb|ADU07490.1| ribonuclease BN [Micromonospora sp. L5]
Length = 333
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 90/271 (33%), Gaps = 3/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA F DG++ + ++L L+V PF++ L LG + V D V
Sbjct: 33 WCLLRDAFIRFRYGDGFSHSRALALQLCLAVVPFLIALTGLITDLGVDEGGKVVADTVLA 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + D + G T+ L + + + NR Y V R
Sbjct: 93 ITPGQSEAMVQDLLTDSERTEDAGELALTLGLLTGLVALTTTMAQIERGANRIYGVERDR 152
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
L + ++A V + + V VR+ + + R ++
Sbjct: 153 PALAKYLRAAVLAVVAGVPALAGFLILVGGRAMGESVRRHYEWGDVAMAGWDVIRWPLSL 212
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + P + + + G W + ++L Y+ + Y L
Sbjct: 213 GLTVLAVAVLFRHAPRRRQPGLSWLFFGASIAIAIWWLASLLLAAYVKYSGGFGQTYGAL 272
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+M L++ + G+ G A +
Sbjct: 273 TGMMALLLWANLTGIALFGGLAFAAQLEAMR 303
>gi|323143392|ref|ZP_08078077.1| putative tRNA-processing ribonuclease BN [Succinatimonas hippei YIT
12066]
gi|322416797|gb|EFY07446.1| putative tRNA-processing ribonuclease BN [Succinatimonas hippei YIT
12066]
Length = 277
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 94/271 (34%), Gaps = 8/271 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + +D + A+ +S + +L++ P + ++ + A + +
Sbjct: 3 ELFKKLLIRVRADDLFIEAAALSYTTILALVPALTVVISIFAMVPAFTPIKQALQNFVQN 62
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + A + + S V A+ +LNR +R + +
Sbjct: 63 NFMPVFSEAIGDYIGIFIAHAGQMTVTGTVILFIVSFFLVRAVDKALNRIWRGGKRKMTM 122
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L + + V + L ++
Sbjct: 123 TFAVYWMLLTLG--------PLATGILIWFTSKVIAYSFLDTPLSFATGLAYFLVPVVVE 174
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I + + + +P A KI + G +F + + + +F+ +I+ FS Y +Y LA+I
Sbjct: 175 LILVSALFITVPVAVVKIRDAVRGALFVMVLFEICKRIFSAFILNFSDYEAIYGALAAIP 234
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++++ + V + GAE + K
Sbjct: 235 VLMIWININWVIVLFGAEFTVCLSELREEKH 265
>gi|325279045|ref|YP_004251587.1| ribonuclease BN [Odoribacter splanchnicus DSM 20712]
gi|324310854|gb|ADY31407.1| ribonuclease BN [Odoribacter splanchnicus DSM 20712]
Length = 430
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 102/267 (38%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ +I+ F+++ AS ++ + LS P + +A GA + +
Sbjct: 40 VVIVSIDRFIKDASMISASALTFYSTLSFIPVVALILAIARGFGAAKAFEDWLKEQSYTN 99
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+V+ + + + + + + + +++NR + V + RS
Sbjct: 100 PDVMQWVMNIANKALDNTQGGVIAGFGIVLLLWSVIRMLSSTELAMNRIWGVKKGRSLVK 159
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ +A + +V++S + V + L L + + ++
Sbjct: 160 KFTDYMSILFIAPILVVLISSMNVFMMANLQEYAMDEGLLSYASAALKAILTLIPYILVW 219
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+F+++F+P K L I + + + + + S+Y+ +Y GLA++
Sbjct: 220 FLFVFLYMFMPTTPVKFKYALVAGIVAGTVFQIVQWFYLRFQIGVSSYNAIYGGLAALPL 279
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
LV+L + + G EL M ++
Sbjct: 280 LLVWLQLSWSIVLWGTELCYIMRNRHF 306
>gi|206562871|ref|YP_002233634.1| putative ribonuclease [Burkholderia cenocepacia J2315]
gi|198038911|emb|CAR54873.1| putative ribonuclease [Burkholderia cenocepacia J2315]
Length = 317
Score = 112 bits (279), Expect = 7e-23, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGIATLISFAALAIGASATFASLSAALSVIWPATESRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ ++ + +++ + + + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGTWLLGNSPYVVVTNVVQFFVGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G I + I + G LF Y+ T S + S
Sbjct: 203 AAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY + +LGAE A+
Sbjct: 262 LLMWLYFSAIVLLLGAEFAAA 282
>gi|254463994|ref|ZP_05077405.1| YihY family protein [Rhodobacterales bacterium Y4I]
gi|206684902|gb|EDZ45384.1| YihY family protein [Rhodobacterales bacterium Y4I]
Length = 288
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 4/266 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVVF 67
+ A F ++GW M+SHI++S +L++FPF++F LAG L + + + VF
Sbjct: 14 LLTAARRFNRKNGWVMSSHIAMSMMLALFPFVLFTVALAGTVASLLSQEVEMDLMTEQVF 73
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
WP+ +A+PI E+ VL L T+ L A YF+SNGV+A+R+++ +AY + R
Sbjct: 74 SVWPDAVARPILTELKSVLQTSNTQLVTLGGLFALYFASNGVDAVRVAMVQAYHDTDTRP 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ R + G V++ ++ ++F V +PL + ++ K P +
Sbjct: 134 FWRARALCIGLVIMGGAGILAVAFFEVFLPLYVRHITKLLPFASVPQGWEQGLSGLLALA 193
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ H+ LP + ILPG + T + W+ A F Y+ +F+ YS YAGLA
Sbjct: 194 LPIGAVLAFHILLPGRIHRFRRILPGAVLTLLLWLACASGFAVYVGSFARYSATYAGLAG 253
Query: 248 IMTCLVFLYMLGVFFILGAELNASMI 273
M ++FLY+ ILGAE N ++
Sbjct: 254 AMAAMIFLYLNSAILILGAEFNGALS 279
>gi|296106232|ref|YP_003617932.1| ribonuclease BN [Legionella pneumophila 2300/99 Alcoy]
gi|295648133|gb|ADG23980.1| ribonuclease BN [Legionella pneumophila 2300/99 Alcoy]
Length = 364
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 39/238 (16%), Positives = 91/238 (38%), Gaps = 11/238 (4%)
Query: 43 IVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
+ G + Q V + +F + K + + Q + +K L +
Sbjct: 1 MSVGLAIFSSFPVFQGLAEPVQNFIFDNFVPATGKIVQSYLQQFTSQVSK-LSIWGVVFL 59
Query: 102 AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA 161
+ + + + ++N+ +RV R L+ + + LA V L + +
Sbjct: 60 IFTALLVMFTIERAMNKIWRVSSSRHGVSAFLLYWAIISLAPVLLGLSLAASSYLFSMPI 119
Query: 162 YVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
P + Y+ IG F+++ +P KI G + I +
Sbjct: 120 LADHRAP---------YTILHYSPFFLSLIGFTFLYVVVPNCPVKIRHAFWGGLVAAILF 170
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
F +Y++ ++TY +Y A++ +++Y + + +LGAE++ + +++ R+
Sbjct: 171 ESAKHAFAYYLIRYNTYELLYGAFATVPIFFIWVYWVWIITLLGAEISYAFSVHHQRR 228
>gi|107026729|ref|YP_624240.1| ribonuclease BN, putative [Burkholderia cenocepacia AU 1054]
gi|116692078|ref|YP_837611.1| putative ribonuclease BN [Burkholderia cenocepacia HI2424]
gi|105896103|gb|ABF79267.1| ribonuclease BN, putative [Burkholderia cenocepacia AU 1054]
gi|116650078|gb|ABK10718.1| putative ribonuclease BN [Burkholderia cenocepacia HI2424]
Length = 314
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 96/261 (36%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGLATLISFAALAIGASATFASLSAALSVIWPATESRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ +V + +++ + + + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTAITFVGTWLLGDSPYVVVTNLVQFFVGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G I + I + G LF Y+ T S + S
Sbjct: 203 AAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY + +LGAE A+
Sbjct: 262 LLMWLYFSAIVLLLGAEFAAA 282
>gi|324994756|gb|EGC26669.1| ribonuclease BN [Streptococcus sanguinis SK678]
Length = 313
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 117/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 22 QFLRAFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VADFLTAIKDM 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 80 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + + +L
Sbjct: 140 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQHFTEPLIYASL 199
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 200 FAVLVMLYYFLPNVKISKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 259
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 260 IMVVMMFWFIIIAKILIVGAVLNASIQ 286
>gi|284166403|ref|YP_003404682.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284016058|gb|ADB62009.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 438
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 45/272 (16%), Positives = 102/272 (37%), Gaps = 16/272 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F++ DA+ E +A+ ++ +S+ P ++ LA +G +
Sbjct: 8 FELAGDALRLARSEQLTLLAAGVAFYGFISLVPLMLLALGLAASIGGEALAERLTAAATD 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
E + + + + + + AL + SS + L + ++ Y +
Sbjct: 68 VLTESARELLAETV--LDDTGRQSATVAGALGLLWGSSRVLRGLDRAFSQVYGTAGSK-- 123
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
S ++ + ++ +A+ AL + ++ P LG + +L
Sbjct: 124 ------SLLDTAWDAMVVFLVITAGLALVAALELLIRYVPFLGATI-----IGPIFVLLG 172
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + +++ P A + LPG + + W + F+ Y Y +Y L ++
Sbjct: 173 LTVTFLPLYVVFPDADVDLREALPGTLVAAVGWYALSRTFSLYATVAGDY-VVYGALGAV 231
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L +LY+ + + GA LNA + ++
Sbjct: 232 FLVLAWLYLGSIILVFGAVLNAVLADREVDRQ 263
>gi|256020869|ref|ZP_05434734.1| conserved inner membrane protein [Shigella sp. D9]
gi|332282083|ref|ZP_08394496.1| conserved hypothetical protein [Shigella sp. D9]
gi|332104435|gb|EGJ07781.1| conserved hypothetical protein [Shigella sp. D9]
Length = 344
Score = 112 bits (279), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|331655148|ref|ZP_08356147.1| putative ribonuclease [Escherichia coli M718]
gi|331047163|gb|EGI19241.1| putative ribonuclease [Escherichia coli M718]
Length = 337
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 95/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 IIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++LA ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISILANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|323966040|gb|EGB61480.1| ribonuclease BN family protein [Escherichia coli M863]
gi|327251165|gb|EGE62858.1| ribonuclease BN-like family protein [Escherichia coli STEC_7v]
Length = 337
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 95/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + A E F + G + I+ + LS+ P ++ AGF+ + + D
Sbjct: 50 IIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|77464765|ref|YP_354269.1| ribonuclease BN [Rhodobacter sphaeroides 2.4.1]
gi|126463606|ref|YP_001044720.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
gi|221640681|ref|YP_002526943.1| Ribonuclease BN [Rhodobacter sphaeroides KD131]
gi|332559659|ref|ZP_08413981.1| Ribonuclease BN [Rhodobacter sphaeroides WS8N]
gi|77389183|gb|ABA80368.1| ribonuclease BN [Rhodobacter sphaeroides 2.4.1]
gi|126105270|gb|ABN77948.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17029]
gi|221161462|gb|ACM02442.1| Ribonuclease BN [Rhodobacter sphaeroides KD131]
gi|332277371|gb|EGJ22686.1| Ribonuclease BN [Rhodobacter sphaeroides WS8N]
Length = 278
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 103/273 (37%), Gaps = 10/273 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ + ++ + D A+ I+ L++FP + + G+ + I
Sbjct: 6 FWHARWRLLVRLYDRVDSADLNLAAAGIAFYGFLAIFPAVAALIAIWGWASDPSVIRAQI 65
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAY 120
++ PE ++ +LA ++ L S AA + + GV AL LN +
Sbjct: 66 NLAADFLPEQAYGLFRGQVEALLAANSRHLGWASLFTTGAAIWSARAGVAALIRGLNATH 125
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R ++ ++TLV + V + + + V P ++
Sbjct: 126 -----RLPNRMGPWHIVRAIVLTLTLVGVGLVAMLLSVVAPLVLNVIPLGDFDQKVLELA 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ +L + G+ V+ P + G++ W + Y+ F+ Y
Sbjct: 181 NVGVGLLVVVFGVALVYRLGPNRPKGSPRPIVTWGLLIAVTLWAAASRGLVFYLANFANY 240
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ +Y + +++ LV+LY+ +LGA ++A
Sbjct: 241 NEVYGSIGAVVALLVWLYLSAFAVLLGAAVDAV 273
>gi|322373467|ref|ZP_08048003.1| YihY family protein [Streptococcus sp. C150]
gi|321278509|gb|EFX55578.1| YihY family protein [Streptococcus sp. C150]
Length = 319
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 117/277 (42%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + + H+ + ++ +L+VFP IV AN+ +L +++
Sbjct: 13 RLQWRPLQVYLRHYRSAEIDISTIAVAYYLILTVFPLIVIAANVFPYLNIDTT--DLLNF 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ P + + V + P+ L +++L + + +L+ ++N+ Y E
Sbjct: 71 MSEHLPKQFYAPAANVVKDVFSTPSGQLLGVASLTGFWTMIKSLSSLQKAINKVYGASEH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +I+ +I L+ L + + L + + +P NL +I N +
Sbjct: 131 RDVFISHIIGGLLSLVILFLLTFALMLSTIVQSVLRVINQTYPIGSNLTQLILNSIQPLS 190
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ +F+G++ ++ LP K + I I+PG IFT + + LF Y++ +
Sbjct: 191 VAVVFLGVMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIRTLSRLVDIKL 250
Query: 245 LASIMT--CLVFLYMLGVFFILGAELNASMIIYYWRK 279
SIM +++ L ILGA NA+ +
Sbjct: 251 FGSIMIFVFMLWFIFLARILILGAIFNATYQELKQGE 287
>gi|261401304|ref|ZP_05987429.1| YihY family protein [Neisseria lactamica ATCC 23970]
gi|269208682|gb|EEZ75137.1| YihY family protein [Neisseria lactamica ATCC 23970]
Length = 406
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 90/264 (34%), Gaps = 20/264 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGA 69
+ F EE A+ ++ + LL++ P + + + + V
Sbjct: 19 FLLFVARRFSEERVPQAAASMTFTTLLALVPVLTVTVAAVSVFPVFESWSGAFVSFVKQT 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A + D + A L I ++ S V + + NR +RV R W
Sbjct: 79 VVPQGADKVLDYL-DAFRRQAGSLTAIGSVMLFVTSLMLVRTIDQAFNRIWRVGAQRPWM 137
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ L+ + + + L + + + W R A L
Sbjct: 138 MQFLVYWALLTCGPLFLGVGISLTAGWGES------------------WLLRPLAMPLGT 179
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ F+P L G T + +F Y+ +F Y ++Y A++
Sbjct: 180 VLLLWGLYCFVPNRFVPARHALIGAAATALCLWCARAVFVWYMGSFDGYRSIYGAFAAVP 239
Query: 250 TCLVFLYMLGVFFILGAELNASMI 273
L++L +L + GA L AS+
Sbjct: 240 FFLLWLNLLWTLVLGGAVLTASLS 263
>gi|162421616|ref|YP_001608362.1| hypothetical protein YpAngola_A4075 [Yersinia pestis Angola]
gi|162354431|gb|ABX88379.1| ribonuclease BN-like family protein [Yersinia pestis Angola]
Length = 357
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 92/268 (34%), Gaps = 8/268 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ +
Sbjct: 50 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFVMVGFVLASNPDLLAELINKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + A Y + + LR ++ R V R+
Sbjct: 110 SISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNP 169
Query: 129 YITRLISF-----GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ L+ V +I++ +I A LG++ + +
Sbjct: 170 QDKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGSIEWLRPAMTLI 229
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A +++ + LP K K ++L G + I + V + T + ++ S A
Sbjct: 230 ALSISIAANYLLFLWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPSGA 288
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
S++ + F Y + A A+
Sbjct: 289 AFGSVIGLMAFFYFFARLTLFCAAWIAT 316
>gi|269128397|ref|YP_003301767.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
gi|268313355|gb|ACY99729.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
Length = 341
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/277 (16%), Positives = 106/277 (38%), Gaps = 12/277 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + V D + A E + ++ G + + I+ A LS FP + G L G+L + Q
Sbjct: 26 LRRRYPWV-DHMARAAERYRDKRGNRLGAAIAFYAFLSFFPLVAIGYALLGYLVGASEQA 84
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + +I Q + + Y + ALR +L
Sbjct: 85 REYLVQAINELLPGLAGEIEVAQIAQAW----GAVGLLGVAGLIYTGLGCMNALREALRD 140
Query: 119 AY--RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL- 175
+ ++ + +L G +L V L+ A V ++ ++
Sbjct: 141 IWLGDPTGGGNFLLKKLHDIGALLFLGVVLITSVAGSTVTGQASHAVLQWLGLEHAVVAG 200
Query: 176 -IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ + T+ + + + L ++ SI G +F + + + + +
Sbjct: 201 LLLRLLTLSVTIGCNTLIFLMLFSRLSGTRAPWRSIAGGALFGAVGFEILKQVGALLVAR 260
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ + +YA A + LV++Y++ F + A +A+
Sbjct: 261 TAG-NPVYASFAVVAGLLVWIYLVARFVVFAAAWSAT 296
>gi|227505354|ref|ZP_03935403.1| ribonuclease [Corynebacterium striatum ATCC 6940]
gi|227198056|gb|EEI78104.1| ribonuclease [Corynebacterium striatum ATCC 6940]
Length = 360
Score = 111 bits (278), Expect = 9e-23, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 104/282 (36%), Gaps = 10/282 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
D I + + E+ G A+ I+ ++L++FP + A + A + V D
Sbjct: 37 FVDHIMRMLGRYGEQGGNQFAAGITYFSVLAIFPLFMLAVAGAATVLATRPDLMQQVQDQ 96
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + + + ++ I L + + LRI ++ +
Sbjct: 97 IANSVSGDLGDTLNELLETAI-AQRGAMYGIGGLTTLWSGLGWMNNLRIGISAMWDKDPN 155
Query: 126 R---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWN 179
+++ +L ++ V L+I V A L + + + ++
Sbjct: 156 ETQGNFFTQKLSDLLGLIGLLVALIIAFGVTAAGSSGLTQKVFEWVGIESFPGMDAVLVL 215
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I ++A F+ ++ +FLP S L G +++ L + I++ ++ +
Sbjct: 216 AGIVIGLVANFLVFWWMIVFLPRTDVPTKSGLKGAAIGAVAFEAIKQL-STVIMSSASGN 274
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A ++ +V +Y++ + + A+ +P
Sbjct: 275 PAGAVFGPVIVLMVVMYLIWRVVLYVSAWTATTEESMELAEP 316
>gi|160893025|ref|ZP_02073813.1| hypothetical protein CLOL250_00563 [Clostridium sp. L2-50]
gi|156865108|gb|EDO58539.1| hypothetical protein CLOL250_00563 [Clostridium sp. L2-50]
Length = 307
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/224 (20%), Positives = 102/224 (45%)
Query: 46 GANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFS 105
L G + ++ P +A ++ + ++ + ISA+ A + +
Sbjct: 56 MMLLIGIRFLPVTQAEFVALIEEIIPGDMANMLSYMVDEIYSAQVGMTMIISAIVAIWSA 115
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
+ G A+ LN R + +++ + RL + Y L+ V L+ ++ V+V + +
Sbjct: 116 AKGTMAIERGLNFMDRTKDTKNYILRRLTNALYTLIFCVMLIALAGVYVLGNTIMEDILA 175
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+ + + R+ + +F ++ ++ LP ++ + +PG +FT + WV+ +
Sbjct: 176 KTNWVDYSEKVFFYSRLLTAPVLVFAVILLIYCRLPDNHLRLKTAIPGAVFTTVCWVLLS 235
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
F+ Y+ F + MY L S++ +++LY+ +LGAELN
Sbjct: 236 AAFSSYLTYFGINTYMYGNLGSMVIAMLWLYICMYILLLGAELN 279
>gi|126347933|emb|CAJ89653.1| putative ribonuclease BN [Streptomyces ambofaciens ATCC 23877]
Length = 321
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 81/274 (29%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ DA F DG+ A ++ +L + PF V LA + + +
Sbjct: 33 LRLLVDAFTRFRYADGFTNARALAFQVVLGLVPFTVVLVGLATSVHTESVGRVIELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVP-----AKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + + + A ++ + + NR Y +
Sbjct: 93 IVPGASADVVEKAFEGTRRSAGSDVWSTVALWLGLGFAVLNLASAMAQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + A + +V+ V VA V + +
Sbjct: 153 RDRPFLRKYGRALVLAFTAGLPMVLGFLVLVAGETVGDAVARTVGHEDGGAAWWGVLDVP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A +L ++ + + P + G + W+ L Y+ + +Y
Sbjct: 213 AGLLLAWVASAVILRWSPRRDQPGYTWLAFGSAVHLVLWISATWLLALYVGRSGAFGAVY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + V LG A +
Sbjct: 273 GPLTAFIALLLWANLTAVALFLGIAFAAQLEAAR 306
>gi|295097114|emb|CBK86204.1| ribonuclease, putative [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 343
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 96/281 (34%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 59 HLIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFNKILT 118
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + L A Y N + LR ++ R V R
Sbjct: 119 NVSDQTLAATLKSTINTAVQQRTTVGIVGLLIALYSGVNWMGNLREAIRAQSRDVWERRP 178
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ V LVI + A + + + L
Sbjct: 179 QDQEKIWVKYLRDFISLIGLLVALVITLSITSVAGSAQQMIISALYLDYIEWLKPAWRGI 238
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G + I + V ++ T+ + + S
Sbjct: 239 GLAISIFANYLLFFWIFWRLPRHRPRKKALMRGTLIAAIGFEVIKIVMTYTLPSLVK-SP 297
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 298 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 338
>gi|152972381|ref|YP_001337527.1| hypothetical protein KPN_03873 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262040578|ref|ZP_06013818.1| inner membrane protein YhjD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330001450|ref|ZP_08304011.1| putative ribonuclease [Klebsiella sp. MS 92-3]
gi|150957230|gb|ABR79260.1| hypothetical protein KPN_03873 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259042070|gb|EEW43101.1| inner membrane protein YhjD [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328537651|gb|EGF63865.1| putative ribonuclease [Klebsiella sp. MS 92-3]
Length = 343
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ AGF+ A + + D
Sbjct: 56 VIAHLLRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDK 115
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + L A Y N + LR ++ R V
Sbjct: 116 ILQNVSDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWE 175
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R ++ ++ V L+I + A + + + L
Sbjct: 176 RRPQDEEKIWVKYFRDLISLIGLLVALIITLSITSVAGSAQQMIISALYLDNIEWLKPAW 235
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + ++ G + I + + ++ T +
Sbjct: 236 RLIGLAISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVK 295
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ R+ P
Sbjct: 296 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMP 338
>gi|148259057|ref|YP_001233184.1| putative ribonuclease BN [Acidiphilium cryptum JF-5]
gi|326402184|ref|YP_004282265.1| putative ribonuclease [Acidiphilium multivorum AIU301]
gi|146400738|gb|ABQ29265.1| putative ribonuclease BN [Acidiphilium cryptum JF-5]
gi|325049045|dbj|BAJ79383.1| putative ribonuclease [Acidiphilium multivorum AIU301]
Length = 283
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/284 (19%), Positives = 118/284 (41%), Gaps = 8/284 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + F + A + + +A+ + A L++FP + +L G V
Sbjct: 4 RTRLDLWFRALRAAAIEVMSGEMSLVAAGCAFYATLALFPAMTALISLYGLAFNPVTVEP 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNR 118
+ + P I I Q+++ L + Y S++G+++L +LN
Sbjct: 64 QLLYLKHLMPPAAFALIGGRIQQLVSGGKTTLGIGLVISLGFTLYSSASGIKSLIYALNV 123
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++ E R ++ + ++ L+A + VI V V +PL LA++ ++
Sbjct: 124 IHKRQETRGFFEFQAVTLAMTLIAMLGAVIAIAVLVGMPLVLAFL----GLAKAPAVLTV 179
Query: 179 NGRIYATMLALFIGLIFVHLFLP-AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ + L ++ F P + ++PG + + W+V + F Y+ F+
Sbjct: 180 LPGFALLIGSMGLALGLLYRFGPAFGRDAGHPVVPGALVAILVWLVVSYGFAVYVGQFAA 239
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
YS Y LA+I+ +++ Y+ + GA NA++ +P
Sbjct: 240 YSRTYGPLATIIGLMMWFYLSAYAVLFGALFNATLDRASVAFRP 283
>gi|167626858|ref|YP_001677358.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241667436|ref|ZP_04755014.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875985|ref|ZP_05248695.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167596859|gb|ABZ86857.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254842006|gb|EET20420.1| tRNA processing ribonuclease BN [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 398
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 101/273 (36%), Gaps = 10/273 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
++Y I + + ++ +D +A+ I+L++L ++ P N+ A +
Sbjct: 8 KKYLSIFKNYWIWVFKEYLRKDCPTVAAAITLTSLFAIVPAFFIIINILNAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +F A + I + + L S + ++ L I+LN+ +
Sbjct: 68 NLQNFLFQNMLPETAATVQQYITSI-SEKMTSLPITSVIVLLVVIFLMIKRLEITLNKVF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + R + L+ + + + + + + + + I
Sbjct: 127 YVNKQRPLVQSLLVYWALMTMGPILMGFVFISSTYLISMA--------WFVKDIGIEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G + LP + + L I + + LF Y+ TYS
Sbjct: 179 LNGLSLIFLIAGFFVFYKILPNTRINSKTALIVAFLVAIVFSIAKKLFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y L+ I ++++++ +LGA + ++
Sbjct: 239 IYGSLSLIPIFILWVFVAWQITLLGAVMIKAIQ 271
>gi|51246728|ref|YP_066612.1| ribonuclease BN [Desulfotalea psychrophila LSv54]
gi|50877765|emb|CAG37605.1| related to ribonuclease BN [Desulfotalea psychrophila LSv54]
Length = 410
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 83/281 (29%), Gaps = 21/281 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE-- 72
F + +S ++ + LLS+ P + + LG + V +
Sbjct: 29 TARGFKQNKLSLRSSALTYTTLLSLVPILAMSTAVVKGLGGGDQLRNVAYSYIQTLEKAS 88
Query: 73 -----------------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ + V L + + +
Sbjct: 89 PAAAPTDQGSDKSTFTTHLRSAVKQVFDYVDRTNFATLGSFGMAGIILSVILVFSHIETA 148
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+N ++V RS ++L +++ I + +
Sbjct: 149 MNAIWKVHSSRSIMRKLSDYVTLLVLMPISINIAFAASAFLK--SPTLNSKIDIFVPFAW 206
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + + + L ++LF P K K + G + W ++ +
Sbjct: 207 LQTLLFQFIPVFFIALTLYVIYLFFPNTKVKNLPAALGALLAGSLWFFVQNIYIGLQIGV 266
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y+ +Y A++ L+++Y+ VF + GA+ ++
Sbjct: 267 GNYNAIYGSFATVPLFLIWMYLGWVFILFGAQFAFAIQNRK 307
>gi|206577641|ref|YP_002236116.1| putative ribonuclease [Klebsiella pneumoniae 342]
gi|290511906|ref|ZP_06551274.1| ribonuclease [Klebsiella sp. 1_1_55]
gi|206566699|gb|ACI08475.1| putative ribonuclease [Klebsiella pneumoniae 342]
gi|289775696|gb|EFD83696.1| ribonuclease [Klebsiella sp. 1_1_55]
Length = 343
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ AGF+ A + + D
Sbjct: 56 VIAHLLRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDK 115
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + L A Y N + LR ++ R V
Sbjct: 116 ILQNVSDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWE 175
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R +I ++ V L+I + A + + + L
Sbjct: 176 RRPQDEEKIWIKYFRDLISLIGLLVALIITLSITSVAGSAQQLIISALYLDNIEWLKPAW 235
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + ++ G + I + + ++ T +
Sbjct: 236 RLIGLAISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVK 295
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ R+ P
Sbjct: 296 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMP 338
>gi|288933112|ref|YP_003437171.1| ribonuclease [Klebsiella variicola At-22]
gi|288887841|gb|ADC56159.1| ribonuclease [Klebsiella variicola At-22]
Length = 343
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ AGF+ A + + D
Sbjct: 56 VIAHLIRAAERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLAWHPTLLQDIFDK 115
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + L A Y N + LR ++ R V
Sbjct: 116 ILQNVSDPTLAATLKNTINTAVQQRTAVGLVGLLVALYSGINWMGNLREAIRAQSRDVWE 175
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R +I ++ V L+I + A + + + L
Sbjct: 176 RRPQDEEKIWIKYFRDLISLIGLLVALIITLSITSVAGSAQQLIISALYLDNIEWLKPAW 235
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + ++ G + I + + ++ T +
Sbjct: 236 RLIGLAISIFANYLLFFWIFWRLPRHRPRRKALFRGTLIAAIGFEIIKIVMTWTLPALVK 295
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ R+ P
Sbjct: 296 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDRRMP 338
>gi|254411294|ref|ZP_05025071.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
gi|196181795|gb|EDX76782.1| YihY family protein [Microcoleus chthonoplastes PCC 7420]
Length = 312
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 121/275 (44%), Gaps = 4/275 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + ++ +++S ++ +A+L++FP I+ + D +
Sbjct: 18 LATLRITVSRALKHRLLSLSSQMAYNAMLALFPAILVIFTVIELFKQFFPWTNPADQLGE 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMR 126
PE + + + + +GLF++S + A + SS + A +L++ ++ + R
Sbjct: 78 VAPEQAMELMRNFAEGINLTDNRGLFSLSFIMAIWVSSGALNAAMNALDQINQIPSEKTR 137
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ +LI+ G L + + L I SF+ + + ++ + LL ++ +
Sbjct: 138 PFWKAKLIAMGLTLGSVLLLFIASFILFISNWVVN-LVEYKSIVVILLTLLRLLSWLIAL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGL 245
+ I ++ F + + ILPG + + W + + +F +Y+ FS Y +Y L
Sbjct: 197 SLVAIVFAIIYRFGISHWRQGTPILPGAVLAAVLWAIVSGVFRNYVASNFSNYHKIYGAL 256
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ ++LYM + +LG +LN ++ K
Sbjct: 257 GAVIVLQLWLYMTSLVVLLGDQLNLTVGEAMQAAK 291
>gi|260599815|ref|YP_003212386.1| Inner membrane protein YhjD [Cronobacter turicensis z3032]
gi|260218992|emb|CBA34347.1| Inner membrane protein yhjD [Cronobacter turicensis z3032]
Length = 344
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 100/282 (35%), Gaps = 12/282 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F E G + I+ + LS+ P ++ +AGF+ + + + +
Sbjct: 59 HLIRAFERFNERMGNQFGAAITYFSFLSMIPILMVSFAVAGFVLASHPTLLQDIFNKILQ 118
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + + A Y N + LR ++ +R R
Sbjct: 119 SVSDPTLAKTLSSSINAAVEQRTTVGIVGFAVALYSGVNWMGYLREAIRAQFRDDWERGA 178
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWN 179
+++ L F ++ V LVI + A + + A+G L +
Sbjct: 179 VEDKEKFWLKYLRDFISLIGLLVALVITMSITSVAGSAQETIIRLLRLDAIGWLKPVWHM 238
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + A ++ ++ LP + + ++L G + I + V ++ T+ + + S
Sbjct: 239 IGLAVSFCANYLLFFWIFWRLPRHRPRKKALLRGTVIAAIGFEVIKIIMTYTLPSLVK-S 297
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + + A+ + P
Sbjct: 298 PSGAAFGSVLGLMAFFYFFARLTLFCSAWIATAQYKNDPQMP 339
>gi|119357454|ref|YP_912098.1| putative ribonuclease BN [Chlorobium phaeobacteroides DSM 266]
gi|288559225|sp|A1BGZ7|Y1653_CHLPD RecName: Full=UPF0761 membrane protein Cpha266_1653
gi|119354803|gb|ABL65674.1| tRNA-processing RNAse BN [Chlorobium phaeobacteroides DSM 266]
Length = 449
Score = 111 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 96/270 (35%), Gaps = 9/270 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI-DVVFGA 69
++F+ + + A ++ +LLS+ P + ++ + + + D V
Sbjct: 52 FFPFFWKNFIHDKIFLSAGSLAFQSLLSLVPLLSVTLSILRVFPVFESLNRYLEDYVLQN 111
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + + + + + + + + + + + + +LN + V R
Sbjct: 112 FIPGTGTMLREYLNAFIDKTS-SVPLLGVVFLFIIALSLISTIDHTLNEIWEVYAPRKIV 170
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + L V + A ++V G LL + + L
Sbjct: 171 QGFTLYWTVLTLGPVLIGSSLV-------ASSFVWYTVFTEGPLLELKTRLLSFLPFLNS 223
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
I +++ +P + + + G + + + + F Y+ F+T+ +Y L+ I
Sbjct: 224 VIAFFLLYMLVPNRRVRFYHAVYGSLLAAVLFELSKKWFVFYVSHFATFEYIYGALSVIP 283
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++Y+ V + GAE + +K
Sbjct: 284 MLFFWIYLEWVVVLTGAEFVFCLGSLKPKK 313
>gi|294010161|ref|YP_003543621.1| putative ribonuclease BN [Sphingobium japonicum UT26S]
gi|292673491|dbj|BAI95009.1| putative ribonuclease BN [Sphingobium japonicum UT26S]
Length = 323
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/249 (22%), Positives = 107/249 (42%), Gaps = 1/249 (0%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
DG+ A +++ +L+++FPF + A +A G Q + P +A+ +
Sbjct: 50 NDGFIHAGNLAYLSLMTLFPFFIVAAAVASIFGRSQDGLAAVGAFLETVPPGVAEVVRQP 109
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I+ VL L + L + + +E +R L RAY R ++ RL + G L+
Sbjct: 110 IVDVLNARTGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTRSTRPFWHYRLTAIGITLV 169
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YATMLALFIGLIFVHLFL 200
+ ++ + V I ++ + P + I+ ++ +L + + ++V L
Sbjct: 170 SVFAVMFAFSMQVIITGIDQFLHQILPFADQAIQIVSLTKLAPMAILCVALYYLYVSLTP 229
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
K PG I T + W +L + Y Y LA +M L+F +++G+
Sbjct: 230 SLYKDPRFPKWPGAIATALWWYGVTLLLPVTLSMLGGYDMTYGSLAGVMITLIFFFLVGL 289
Query: 261 FFILGAELN 269
++GAELN
Sbjct: 290 GVVIGAELN 298
>gi|300727197|ref|ZP_07060614.1| YihY family protein [Prevotella bryantii B14]
gi|299775545|gb|EFI72138.1| YihY family protein [Prevotella bryantii B14]
Length = 441
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 102/271 (37%), Gaps = 3/271 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++++ + I + +F A+ +S S +L++ P + + G +V
Sbjct: 24 IQQWGKSISRKILVSCRYFFLRGHMDYATQLSFSTILALVPILAMFFAVGRAFGLSMYVD 83
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ VF + P+V + T + L + L Y + + + + + +
Sbjct: 84 NILRQVFKSQPQVADELFTMADSYLNQAQTGILIGLGILVMLYSILSLIRNIEMVFDIIW 143
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V RS + + L V L+I+S V + L + F G +I
Sbjct: 144 HVDRQRSVGRLIIDYTAMIFLIPVILIILSSTSVLVFGVLDRIPDFLLLDGIFRFLI--- 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R+ + L L I V++++P K+ + +F + + H + ++Y+
Sbjct: 201 RVVSPWLLLTAVFIGVNMYVPNTHVKLSCTIIPSMFASAFMLALQYFYIHGQIFLTSYNA 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A I ++++ + EL +
Sbjct: 261 IYGSFAVIPLFMIWMLASWYIILFFGELCYA 291
>gi|170735928|ref|YP_001777188.1| ribonuclease BN [Burkholderia cenocepacia MC0-3]
gi|169818116|gb|ACA92698.1| ribonuclease BN [Burkholderia cenocepacia MC0-3]
Length = 308
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/261 (19%), Positives = 96/261 (36%), Gaps = 5/261 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG+ G V + +
Sbjct: 23 AFKRFSSDRCSAMAAGIAFFSAFSLAPTLVMVIAVAGWFYGDDAARGQVFEQAHQLIGDD 82
Query: 74 IAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A I + IS A A +S +L +L+ + E R +
Sbjct: 83 AAASIQTIVQNAHRAGERGGLATLISFAALAIGASATFASLSAALSVIWPATESRWSSML 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ + + + + V + + A+ ++ + +++ + + + L
Sbjct: 143 GLVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGTWLLGDSPYVVVTNLVQFFVGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ G I + I + G LF Y+ T S + S
Sbjct: 203 AAFASLMKFLPDARVAWRDAAIGGIVSAILFSGGKKLFALYLAHAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++LY + +LGAE A+
Sbjct: 262 LLMWLYFSAIVLLLGAEFAAA 282
>gi|19704489|ref|NP_604051.1| ribonuclease BN [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
gi|19714763|gb|AAL95350.1| Ribonuclease BN [Fusobacterium nucleatum subsp. nucleatum ATCC
25586]
Length = 396
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 32/262 (12%), Positives = 96/262 (36%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 2 LKRAYEKYQRANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAEDYIINQIKDIAPLKE 61
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ + L + L + + S N + + + RS
Sbjct: 62 GTLELLTDFSNNLLMDARSNVLAGVGFLFLGWTFIQMFSLIEESFNEIWHIKKSRSLIRK 121
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + +I++ + + + + ++ + + + ++++ I
Sbjct: 122 ISDYISFFIFLPLLFIILNGLVLFL----------LSKIKEIVFLYYIVKNIFPLISMTI 171
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++L +P KI+ + I++++ +F Y+T+Y G + I
Sbjct: 172 FFMALYLVMPNTMVKIIPAFIASVIVSIAFLLFQYIFILLQFLLIGYNTVYGGFSVIFIF 231
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L+++ + ILG + +
Sbjct: 232 LIWVRICWFIVILGVHITYLIQ 253
>gi|227328197|ref|ZP_03832221.1| hypothetical protein PcarcW_13025 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 338
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 91/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 47 HLIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTELINRIVN 106
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + L A Y + + LR ++ R V R+
Sbjct: 107 SISDPNLANTLKSTVNTAVQQRTTVGITGLLIALYSGISWMGNLREAIRAQSRDVWERNP 166
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
Y F + + L+I F+ A + + L +
Sbjct: 167 KDEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLI 226
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++ G + + + + T + ++ S
Sbjct: 227 ALSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEIIKFAMTVALPKLAS-SP 285
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 286 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 316
>gi|163858249|ref|YP_001632547.1| BrkB transmembrane protein [Bordetella petrii DSM 12804]
gi|163261977|emb|CAP44279.1| BrkB transmembrane protein [Bordetella petrii]
Length = 324
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 96/279 (34%), Gaps = 7/279 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVV 66
++ ++ D+ + + + + +SL + S+ P ++ +AG F G + V
Sbjct: 35 IYGLLVDSAKQWSGHRASSKGAALSLYMVFSLAPMLILVIAVAGIFFGEEAVRSELFAQV 94
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ I + + +S + ++ L+ SL+ +
Sbjct: 95 RDLTGARGAEVIQTVLASAHESGGGWIAALLSIAVLLFSATTAFAELQASLDELWDATSQ 154
Query: 126 RSWYIT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGR 181
R + + S + L + + + + AL + ++ L ++
Sbjct: 155 RKSGLQGMVRSRMVSFGLVLVLALFLLLSLIMNAALGAAKGYYGDLWTHSAFAVLAGWLS 214
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + V+ LP+ ++PG I T ++VG Y+ T S
Sbjct: 215 NLFSFAVVTALFAVVYKLLPSIAIPWRDVIPGAIVTAALFLVGKWGIGLYLGRGGTVSA- 273
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y S++ L+++Y F GA + +K
Sbjct: 274 YGAAGSLIALLLWIYYSAQIFFFGAVFTRQFAERFGSRK 312
>gi|327461083|gb|EGF07416.1| ribonuclease BN [Streptococcus sanguinis SK1057]
Length = 308
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 57/267 (21%), Positives = 115/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + V + +
Sbjct: 17 QFLREFFRFYKEADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--VADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ L + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTSLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDNQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMFYYFLPNVKINKKRYVLPGSAFVLLTILSLLNIFSVYMDNYLNHLVDVRSFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIIIAKILIIGAVLNASIQ 281
>gi|225868869|ref|YP_002744817.1| ribonuclease BN-like family protein [Streptococcus equi subsp.
zooepidemicus]
gi|225702145|emb|CAW99833.1| ribonuclease BN-like family protein [Streptococcus equi subsp.
zooepidemicus]
Length = 312
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/281 (20%), Positives = 116/281 (41%), Gaps = 5/281 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++ I + HF + A ++ +L+ FP IV AN+ +L +
Sbjct: 9 KVISKWQYEPIQAFMRHFQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--ISD 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ ++ P+ I + + ++ + + P+ G+ I+ L + S + +L+ + N+AY
Sbjct: 67 LLRLMKEQLPKDIYRSASSIVVNIFSKPSGGVLGIATLTGLWTMSRSLASLQKAFNKAYD 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R + + L+ LL L A+ + + + N+ +
Sbjct: 127 ASEHRDFLLGHLVGLLTSLLILFLLTFALIFSTFSKAAIQVLDRHYHLNDNITTLFLFLI 186
Query: 182 IYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
T+L +F+GL+ ++ LP K KI ILPG FT + + + +Y+V
Sbjct: 187 QPITILIIFVGLMLLYFLLPNIKIKKIRYILPGTFFTTFVMIFLSNMVGNYVVHNVERMV 246
Query: 241 MYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L I+GA NA+ K
Sbjct: 247 DIKTFGSVMVFIIMLWFIFLARILIMGAVFNATYQELSIGK 287
>gi|251782760|ref|YP_002997063.1| ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|242391390|dbj|BAH81849.1| ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis
GGS_124]
gi|323127604|gb|ADX24901.1| Ribonuclease BN [Streptococcus dysgalactiae subsp. equisimilis ATCC
12394]
Length = 318
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + HF + + ++ +L+ FP I+ AN+ +L + ++ +
Sbjct: 13 KWQYEPIQVFMRHFQSAEMDLSSIAVAYYLILTAFPLIIIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I KP + ++ + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFKPASSIVVNIFSKPSGSVLGVATLTGFWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++I L+ L+ L A+ + + N+ T
Sbjct: 131 RDFFIGHLVGLLTSLIILFLLTFALIFSTFSKAAIQVLDNHYNLSDNITTAFLLLIQPIT 190
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F+GL+ ++ LP K KI ILPG IFT + L +Y+V
Sbjct: 191 VLIIFVGLMLLYFLLPNVKIKKIRYILPGTIFTSFVMTFLSNLVGNYVVHNVEKMVDIKT 250
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L ILGA NA+ K
Sbjct: 251 FGSVMIFIIMLWFIFLARILILGAIFNATYQEMSVGK 287
>gi|328952421|ref|YP_004369755.1| ribonuclease BN [Desulfobacca acetoxidans DSM 11109]
gi|328452745|gb|AEB08574.1| ribonuclease BN [Desulfobacca acetoxidans DSM 11109]
Length = 309
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 37/273 (13%), Positives = 100/273 (36%), Gaps = 4/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVV 66
V+ ++ + + + ++ + + ++ + S+ P ++ + GF G ++ +
Sbjct: 16 VWSLLKETYQEWSTDNAPQLGAALAFYTIFSLAPILIIIMAVVGFFLGKESVQIYLMQEL 75
Query: 67 FGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
G AK I + + + + S+ L+ +LN + V
Sbjct: 76 TGFVGLENAKNIMHIVQRSYKPGSGLTATITAISLMLLGSTTIFVTLKNALNTMWGVKYQ 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYA 184
+ + +I + + ++ F+ + I +A F L ++++
Sbjct: 136 PAGLVNSIIDRLKSFFTVILVGLVLFLSMLISSVVAMADSFIGMYFPLPVILVQTLNTGL 195
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++L + + LP + ++ G T + + +G L Y+ ++ S+ Y
Sbjct: 196 SLLLFTLMFALLFKVLPDVRLSWRAVGVGAGITALLFGLGKNLLGAYLAR-TSVSSAYGA 254
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S++ L+++Y +GAE +
Sbjct: 255 AGSMVVLLLWVYYSAQIIFIGAEFTQVYARKFG 287
>gi|253686495|ref|YP_003015685.1| ribonuclease [Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251753073|gb|ACT11149.1| ribonuclease [Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 338
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 90/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 47 HLIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTGLINRIVN 106
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + L A Y + + LR ++ R V R
Sbjct: 107 SISDPNLANTLKNTVNTAVQQRTTVGITGLLIALYSGISWMGNLREAIRAQSRDVWERSP 166
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
Y F + + L+I F+ A + + L +
Sbjct: 167 KDEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLI 226
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++ G + + + V T + ++ S
Sbjct: 227 ALSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEVIKFAMTVALPKLAS-SP 285
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 286 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 316
>gi|50123279|ref|YP_052446.1| hypothetical protein ECA4359 [Pectobacterium atrosepticum SCRI1043]
gi|49613805|emb|CAG77256.1| putative membrane protein [Pectobacterium atrosepticum SCRI1043]
Length = 338
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 90/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 47 HLIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTGLINRIVN 106
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + L A Y + + LR ++ R V R+
Sbjct: 107 SISDPNLANTLKSTVNTAVQQRTTVGLTGLLIALYSGISWMGNLREAIRAQSRDVWERNP 166
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
Y F + + L+I F+ A + + L +
Sbjct: 167 KDEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLI 226
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++ G + + + T + ++ S
Sbjct: 227 ALSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEAIKFAMTVALPKLAS-SP 285
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 286 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 316
>gi|322412067|gb|EFY02975.1| Ribonuclease BN [Streptococcus dysgalactiae subsp. dysgalactiae
ATCC 27957]
Length = 318
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + HF + + ++ +L+ FP I+ AN+ +L + ++ +
Sbjct: 13 KWQYEPIQAFMRHFQSSEMDLSSIAVAYYLILTAFPLIIIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I KP + ++ + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFKPASSIVVNIFSKPSGSVLGVATLTGFWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++I L+ L+ L A+ + + N+ T
Sbjct: 131 RDFFIGHLVGLLTSLIILFLLTFALIFSTFSKAAIQVLDNHYNLSDNITTAFLLLIQPIT 190
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F+GL+ ++ LP K KI ILPG IFT + L +Y+V
Sbjct: 191 VLIIFVGLMLLYFLLPNVKIKKIRYILPGTIFTSFVMTFLSNLVGNYVVHNVEKMVDIKT 250
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L ILGA NA+ K
Sbjct: 251 FGSVMIFIIMLWFIFLARILILGAIFNATYQEISVGK 287
>gi|119716581|ref|YP_923546.1| ribonuclease BN [Nocardioides sp. JS614]
gi|119537242|gb|ABL81859.1| ribonuclease BN [Nocardioides sp. JS614]
Length = 327
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 111/281 (39%), Gaps = 15/281 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--- 64
V+ + + ++ +A+ + A+LSV P I A G++ V D
Sbjct: 30 VWRLFVTTVASCLKYRVTGLAAEAAFFAVLSVPPLIFAMAGAIGYVTDQFSPAQVADVRA 89
Query: 65 -----VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ K I I VL + ++ + A + S + ++
Sbjct: 90 AVVDLSARALTDGAVHKIIEPTIDDVLRGGRFDVISLGFVLALWSGSRALNVFVDTITIM 149
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + R TR +SF +LA VT V+ + +A P + L L ++
Sbjct: 150 HGLGGHRGIVKTRALSFLLYVLAMVTGVVTIPLVIAGPSLVE------DWLPERLDLLMG 203
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L ++ ++ LPG F+ WVVG+ L ++ +T S
Sbjct: 204 FYWPVVTVVCICFLATLYHVSVPVRTNWSFNLPGATFSLFCWVVGSYLLRWFLTVTATDS 263
Query: 240 -TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++Y LA+ + L++LY++ + ++GA +NA+ + +K
Sbjct: 264 RSIYGPLAAPIAVLLWLYLVSIAVLIGAAVNAAFDTVFPQK 304
>gi|300021750|ref|YP_003754361.1| ribonuclease BN [Hyphomicrobium denitrificans ATCC 51888]
gi|299523571|gb|ADJ22040.1| ribonuclease BN [Hyphomicrobium denitrificans ATCC 51888]
Length = 294
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 76/277 (27%), Positives = 140/277 (50%), Gaps = 7/277 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++AI E G+AMA ++ S ++S+FPF +F L+G G + I+ +F
Sbjct: 5 RRLFEAIYRLYEHSGFAMAGAVAFSFVVSIFPFCIFLGALSGVFGGRELAQDAINQLFAI 64
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE +AK I EI V+ L T S A +F+++ +E LR +LN AYRV E R +
Sbjct: 65 LPEPVAKGIAPEIEAVMGSRRIDLLTASGFLALFFATSAIETLRAALNGAYRVHEKRPYP 124
Query: 130 ITRLISFGYVLLASVTLVIMSFV------FVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ LIS +V +++++ +++++ V +A + ++ L + + R
Sbjct: 125 LCLLISMLFVFVSAISTLVLTWAVVVGPSVVGPAIASQFESEWVKRLFDSTALGPGVRYG 184
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L +HL+L A + ++ + PGV+ + + W+ A L++ Y+ + YS YA
Sbjct: 185 LAGAVIAAQLCALHLWLAAGRRRLADVWPGVLLSIVLWLALAGLWSRYLA-ITNYSLFYA 243
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
GL+ +M L+F + +LGAE N + ++
Sbjct: 244 GLSQLMIALIFFQFTAITILLGAEFNRGVSEMKRMRR 280
>gi|332359440|gb|EGJ37260.1| putative ribonuclease BN [Streptococcus sanguinis SK355]
Length = 307
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/267 (21%), Positives = 116/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + E D + ++ L+SVFP ++ N+ + + + +
Sbjct: 17 QFLREFFRFYKESDSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--IADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+I+ N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMFYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + M+ I+GA LNAS+
Sbjct: 255 IMVVMMFWFIMIAKILIVGAVLNASIQ 281
>gi|320661625|gb|EFX29040.1| putative ribonuclease [Escherichia coli O55:H7 str. USDA 5905]
Length = 337
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISTLHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|83593957|ref|YP_427709.1| tRNA-processing RNAse BN [Rhodospirillum rubrum ATCC 11170]
gi|123526051|sp|Q2RR23|Y2625_RHORT RecName: Full=UPF0761 membrane protein Rru_A2625
gi|83576871|gb|ABC23422.1| tRNA-processing RNAse BN [Rhodospirillum rubrum ATCC 11170]
Length = 440
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 95/280 (33%), Gaps = 7/280 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVP 60
R + + D +A+ ++ ++LL++ P I +
Sbjct: 27 RRILATAGSFTILVLRALITHDIPRLAASLAYTSLLALVPLIAIALAILAAFPGFGDERE 86
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + + I D++ + A GL + + + + SLN +
Sbjct: 87 RMVAWIIETFVPYRRTEILDQVEHFVGA-AAGLTALGVAGLTLTAIILLLTIESSLNAIF 145
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV + R L+ + + + + + + + V + + L
Sbjct: 146 RVEKSRHPLARLLVYWSVLTGGPLLMGLSFSLSSYLVAIRHLVGTDVMSPFDALTPT--- 202
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L + +++ +P + L G + ++ + F I +Y T
Sbjct: 203 --LGPPLLSLTAMTLLYMLVPNRPVPLFHALAGALVATLASALLRSAFLMVITRGLSYET 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA++ LV++Y+ ++GA A + + ++
Sbjct: 261 LYGALAALPAFLVWMYLSWAVVLMGAVTAAEIPNWKMARR 300
>gi|227113859|ref|ZP_03827515.1| hypothetical protein PcarbP_12884 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 338
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 91/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 47 HLIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTGLINRIVN 106
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + L A Y + + LR ++ R V R+
Sbjct: 107 SISDPNLANTLKSTVNTAVQQRTTVGITGLLIALYSGISWMGNLREAIRAQSRDVWERNP 166
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
Y F + + L+I F+ A + + L +
Sbjct: 167 KDEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLI 226
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++ G + + + V T + ++ S
Sbjct: 227 ALSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEVIKFAMTVALPKLAS-SP 285
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 286 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 316
>gi|255536199|ref|YP_003096570.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
gi|255342395|gb|ACU08508.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
Length = 319
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 100/284 (35%), Gaps = 10/284 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
+ ++ + + + ++ ++ A+ S+ ++ +AG F G
Sbjct: 5 KKLGFFWETLKETFTEWNNSPAGTDSASLAYYAIFSIPGLLIIIIWIAGYFFGQEAIQGQ 64
Query: 62 VIDVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + G +A I + I ++ + + + + ++ L+ SLN +
Sbjct: 65 ISNQIGGMMGGNVADSIEEMIAGALIDKENIFMKIVGIFSLVFGATTIFFQLQKSLNNLW 124
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
V +++ R S G +L+ L+I + I L Y+ F
Sbjct: 125 DVEPAPKKAFVKFFLDRANSLGMILVIGFLLMITMVLSSLISLFNNYIAAQFGL--ETYY 182
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ L + + F+ LP A+ + S+ G T + +G L + Y F
Sbjct: 183 LMELVNFVIGFLLVMLVFAFMFKVLPDAEIRWKSVWAGATLTAALFTIGKFLLSFYFAEF 242
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + +I+ ++++ + GAE K
Sbjct: 243 -KPESAFGKAGTIILIMMWINYSCMLIFFGAEYTKVYSRKKGYK 285
>gi|319953362|ref|YP_004164629.1| ribonuclease bn [Cellulophaga algicola DSM 14237]
gi|319422022|gb|ADV49131.1| ribonuclease BN [Cellulophaga algicola DSM 14237]
Length = 313
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 112/285 (39%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
+ + +I D + + + + W +++ ++ A+LS+ ++ N+ G + G
Sbjct: 8 KFKLKDLPSLIVDTYKAWDKANPWRLSAVVAYYAVLSLPALLIIIINIVGSIWGTEIVQG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRA 119
+ + A A+ I I + + I + ++ L++SLN
Sbjct: 68 RLTSEISTALGSNAAEAIETIIAETQNKEENLISTIIGIGTLLFGATGVFYQLKLSLNEM 127
Query: 120 YRVVEMRSWYITRL-----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + +L SF ++L+ L++ V I Y+RK FP + L+
Sbjct: 128 WHIKPNPNANFWKLVTDRARSFAFILVIGFLLLVSFIVTAGISALNEYIRKVFPDI--LI 185
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + ++ + + + ++P AK + ++ G + T + +V+G L Y
Sbjct: 186 YIAYILDFTVSIGIITVLFALMFRYMPDAKIRWKTVWIGALITAVLFVIGKSLLGFYFGE 245
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + Y +I+ L+++ + GAE Y K
Sbjct: 246 -ANPGSTYGAAGTIVLILLWVSYSCLILFFGAEFTYIYAKRYGHK 289
>gi|146278656|ref|YP_001168815.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
gi|145556897|gb|ABP71510.1| putative ribonuclease BN [Rhodobacter sphaeroides ATCC 17025]
Length = 278
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/273 (17%), Positives = 104/273 (38%), Gaps = 10/273 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ + ++ + D A+ I+ L++FP + + G+ + I
Sbjct: 6 FWHARWRLLVRLYDRVDSADLNLAAAGIAFYGFLAIFPAVAALIAIWGWASDPSVIRAQI 65
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAY 120
D+ PE ++ +LA ++ L S AA + + GV AL LN +
Sbjct: 66 DLAADFLPEQAYALFRGQVEALLAANSRHLGWASLFTTGAAIWSARAGVAALIRGLNATH 125
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R ++ ++TLV + V + + + V P ++
Sbjct: 126 -----RLPNRMGPWHIVRAIVLTLTLVGVGLVAMLLSVVAPLVLNVIPLGDFNQRVLELA 180
Query: 181 RIYATMLALFIGLIFVHLFLPAAKS--KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ML + G+ V+ P + G++ W + + Y+ F+ Y
Sbjct: 181 NVAVGMLVVIFGVALVYRLGPNRPKGSPKPVVTWGLLTAVTLWALASRALVFYLANFANY 240
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ +Y + +++ LV+LY+ +LGA ++A
Sbjct: 241 NEVYGSIGAVVALLVWLYLSAFAVLLGAAVDAV 273
>gi|218962155|ref|YP_001741930.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
gi|167730812|emb|CAO81724.1| hypothetical protein; putative membrane protein [Candidatus
Cloacamonas acidaminovorans]
Length = 359
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 104/276 (37%), Gaps = 9/276 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ F ++ I + F+ E ++ ++ LL PFI F +A L
Sbjct: 43 KKVFSNIWTFIKTFYQRFMGEGILKESASLTYITLLGFVPFINFLVLIAPDLPFLNLGDK 102
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++V + A I + + +++ +P G + + S + +R + +
Sbjct: 103 LRELVVQNFIPSSANAIINFLDKLI-MPKVGFNIFNFVILIVSSYSLFSVIRGTFD---- 157
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + S + + F + I L + + ++
Sbjct: 158 ----RILSMQLKSSQDTITQLVKFFGTIVFGLLIIVLLFSSSSIPIISRLLKSPVLQWIM 213
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + F+ ++F+++ LP+ + S+ G +T + WV+G F YI + Y +
Sbjct: 214 VIVPFVLQFLAIMFLYMLLPSVRINRASLFRGAFWTTVIWVIGKSAFDFYIYNLTNYERL 273
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y +A + L+++Y+ + G L + M
Sbjct: 274 YGVMAVLPIFLLWIYINWAIILGGMVLVSEMENKKN 309
>gi|323975076|gb|EGB70185.1| ribonuclease BN family protein [Escherichia coli TW10509]
Length = 337
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 95/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + A E F + G + I+ + LS+ P ++ AGF+ + + D
Sbjct: 50 IIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|146313551|ref|YP_001178625.1| putative ribonuclease [Enterobacter sp. 638]
gi|145320427|gb|ABP62574.1| putative ribonuclease [Enterobacter sp. 638]
Length = 341
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 95/286 (33%), Gaps = 11/286 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ + A E F + G + I+ + LS+ P ++ AGF+ + +
Sbjct: 52 RPMIAHLIRATERFNDRMGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPTLLQDIF 111
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + + + + L A Y N + LR ++ R V
Sbjct: 112 NKILVNVSDPTLAATLKNTISTAVQQRTTVGIVGLLIALYSGINWMGNLREAIRAQSRDV 171
Query: 124 EMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLL 175
R +I L F ++ + L++ + A + + + L
Sbjct: 172 WERTPQDEEKIWIKYLRDFVSLIGLLIALIVTLSITSVAGSAQQMIISALYLDYIEWLKP 231
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ +
Sbjct: 232 AWRVIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIVMTYTLPML 291
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 292 VK-SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAQYKDDPRMP 336
>gi|306833155|ref|ZP_07466285.1| possible ribonuclease BN [Streptococcus bovis ATCC 700338]
gi|304424729|gb|EFM27865.1| possible ribonuclease BN [Streptococcus bovis ATCC 700338]
Length = 309
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + ++H+ + A ++ LL+ FP IV AN+ +L + ++ +
Sbjct: 16 WQPLQVYLKHYQSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--ISVLLSFMEK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + ++ + + P+ + ++ L A + S + +L+ ++N+AY V + R +
Sbjct: 74 NLPTNLYPSVSAITTDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVSQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I RLI LL L + AL + + + ++ N T+L
Sbjct: 134 VIGRLIGVLASLLILFLLTFVLIFSTFSKAALQIISTHYDLSDTVATVVLNLSQPVTVLT 193
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ GL+ ++ LP K + ILPG IFT V LF++YI+ S
Sbjct: 194 IVFGLMLLYFILPNVKIRRFRYILPGTIFTSFVIVFLNNLFSNYILRTFERMVDIKTFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++ L ILGA NA+ K
Sbjct: 254 VVIFVLMLWFIFLAHILILGAIFNATYQELRQGK 287
>gi|288904981|ref|YP_003430203.1| Ribonuclease BN protein [Streptococcus gallolyticus UCN34]
gi|306831051|ref|ZP_07464212.1| possible ribonuclease BN [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325977948|ref|YP_004287664.1| putative ribonuclease BN protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731707|emb|CBI13268.1| putative Ribonuclease BN protein [Streptococcus gallolyticus UCN34]
gi|304426617|gb|EFM29728.1| possible ribonuclease BN [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177876|emb|CBZ47920.1| putative ribonuclease BN protein [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 310
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 114/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + ++H+ + A ++ LL+ FP IV AN+ +L + ++ +
Sbjct: 16 WQPLQVYLKHYRSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--ISVLLSFMEK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + ++ + + P+ + ++ L A + S + +L+ ++N+AY V + R +
Sbjct: 74 NLPTNLYPSVSAITTDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVSQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I RLI LL L + AL + + + ++ N T+L
Sbjct: 134 VIGRLIGVLASLLILFLLTFVLIFSTFSKAALQIISAHYDLSDTVATVVLNLSQPVTVLT 193
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ GL+ ++ LP K + ILPG IFT V LF++YI+ S
Sbjct: 194 IVFGLMLLYFILPNVKIRRFRYILPGTIFTSFVIVFLNNLFSNYILRTFERMVDIKTFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++ L ILGA NA+ K
Sbjct: 254 VVIFVLMLWFIFLAHILILGAIFNATYQELRQGK 287
>gi|332084582|gb|EGI89776.1| ribonuclease BN-like family protein [Shigella boydii 5216-82]
Length = 337
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|238917097|ref|YP_002930614.1| hypothetical protein EUBELI_01167 [Eubacterium eligens ATCC 27750]
gi|238872457|gb|ACR72167.1| Hypothetical protein EUBELI_01167 [Eubacterium eligens ATCC 27750]
Length = 284
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/265 (20%), Positives = 113/265 (42%), Gaps = 5/265 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+I + E+ AS +LS FPF + +L FL + ++ V++G
Sbjct: 7 LIKRIVTKISEDRIGDYASSACYYLMLSFFPFFIGLLSLIKFLPVSKA--DLLKVIYGVL 64
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + + + L I+A+A + + G A+ L + YR ++W
Sbjct: 65 PTQLQPIVQAMLTDIYDNSTTALTLITAIAIIWAAGKGFMAIVRGLKQIYRKDNQKNWLF 124
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI---IWNGRIYATML 187
R+ + Y L+ + ++ + V + + K+ P L N+++I I+N + +
Sbjct: 125 QRIRASIYALIFMILIIASLILMVFGNNIMNFTMKYIPQLTNVVVIFRGIFNSKHFLFPS 184
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + K +PG F+ + W + L++ Y+ +S MY LA+
Sbjct: 185 IFTLFFTIAFSLVSRRGKKFYKEIPGAFFSALGWYLFTALYSLYVGHSPNFSYMYGSLAT 244
Query: 248 IMTCLVFLYMLGVFFILGAELNASM 272
I+ L+++Y + +GAE+N +
Sbjct: 245 IIIALIWMYACMIIIFIGAEINYFI 269
>gi|111220632|ref|YP_711426.1| ribonuclease domain-containing protein [Frankia alni ACN14a]
gi|111148164|emb|CAJ59834.1| Putative integral membrane protein; putative ribonuclease domain
[Frankia alni ACN14a]
Length = 417
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 87/270 (32%), Gaps = 9/270 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVI 63
D I A + + G +A+ + A LS FP + + GF+ ++
Sbjct: 26 RPFLDHIIRAYSRYTADGGDRLAASATYFAFLSFFPIVALAFAVTGFVVDAYPDVQDSLT 85
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + + I LA + +ALR+ ++ V
Sbjct: 86 KQINDYLPGLADRLDVTSIGNAKVGVGIVGLLGLLLAGLAWIDALRDALRLIWHQDIDVG 145
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII--WNGR 181
+ + RL + +TL+ V A + G+
Sbjct: 146 ---NIIMRRLRDITVLAGLGLTLLASLVVTSLSTSATGTFLDWIGLSGSTAAAWVTGILA 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++ LP + S G + + + V+ T I +T + +
Sbjct: 203 LLVALAIDTAVFLYLFWRLPGQTDRSRSA-RGAVLGAVGLEILKVVGTWLIGK-TTGNPV 260
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y A I+ L+++ ++ + + A +
Sbjct: 261 YGTFAVIVGLLIWINIVMRWTLFAAAWTVT 290
>gi|320540132|ref|ZP_08039787.1| putative conserved inner membrane protein [Serratia symbiotica str.
Tucson]
gi|320029798|gb|EFW11822.1| putative conserved inner membrane protein [Serratia symbiotica str.
Tucson]
Length = 429
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 96/281 (34%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ + G
Sbjct: 150 HLLRAAERFNDRLGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAKLINRIVG 209
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + + A Y + + LR ++ R + R+
Sbjct: 210 SISDPTLASKLKNTVNTAIQQRTTVGLTGLVLALYSGISWMGNLREAIRAQSRDIWERNP 269
Query: 129 ------YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
Y F ++ V L+I + A A + + L +
Sbjct: 270 QDQEKVYFKYTRDFISLIGLVVALIITLSLTSIAGSAQAVIVNALGLDGIEWLRPAMTLI 329
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + V + T + + S
Sbjct: 330 ALSISVFANYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQVAK-SP 388
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 389 SGAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYQEDKTLP 429
>gi|225870127|ref|YP_002746074.1| ribonuclease BN-like family protein [Streptococcus equi subsp. equi
4047]
gi|225699531|emb|CAW93105.1| ribonuclease BN-like family protein [Streptococcus equi subsp. equi
4047]
Length = 312
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 115/281 (40%), Gaps = 5/281 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++ I + HF + A ++ +L+ FP IV AN+ +L +
Sbjct: 9 KVISKWQYEPIQAFMRHFQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--ISD 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ ++ P+ I + + ++ + + P+ + ++ L + S + +L+ + N+AY
Sbjct: 67 LLRLMKEQLPKDIYRSASSIVVNIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAFNKAYD 126
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E R + + L+ LL L A+ + + + N+ +
Sbjct: 127 ASEHRDFLLGHLVGLLTSLLILFLLTFALIFSTFSKAAIQVLDRHYHLNDNITTLFLFLI 186
Query: 182 IYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
T+L +F+GL+ ++ LP K KI ILPG FT + + + +Y+V
Sbjct: 187 QPITILIIFVGLMLLYFLLPNIKIKKIRYILPGTFFTTFVMIFLSNMVGNYVVHNVERMV 246
Query: 241 MYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L I+GA NA+ K
Sbjct: 247 DIKTFGSVMIFIIMLWFIFLARILIMGAVFNATYQELSIGK 287
>gi|298208253|ref|YP_003716432.1| Ribonuclease BN [Croceibacter atlanticus HTCC2559]
gi|83848174|gb|EAP86044.1| Ribonuclease BN [Croceibacter atlanticus HTCC2559]
Length = 307
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/254 (18%), Positives = 103/254 (40%), Gaps = 2/254 (0%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
AS I+ S ++VFPF++F NL F+ F + + P +
Sbjct: 52 STRASAIAFSFFMAVFPFLLFMLNLIPFITFIDDFQLEFLTFMDALLPPTTTEFFNGIFA 111
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ + GL + + + + + +NGV A+ ++ RS +++ G ++ +
Sbjct: 112 DIASNQRGGLLSFTFVLSIFLMANGVNAVFTGFEYSFHTSINRSIIRQYMVAVGVSIILA 171
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ L+ V I + + + + + R ++ +++ ++
Sbjct: 172 LLLLTTVIATVYISYIIDGLTSM-GIFNDDVFWLQIARYGVFVIIVYVITALLYYTGTRE 230
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
G +FT + ++ LF YI FS Y+ +Y + +++ +V++++ +
Sbjct: 231 GKHTSFWSAGALFTTLLIMLTTYLFGIYIENFSNYNELYGSIGTLLILMVYIWINSNIIL 290
Query: 264 LGAELNASMIIYYW 277
LG ELNAS+
Sbjct: 291 LGFELNASIYRLKQ 304
>gi|257464081|ref|ZP_05628465.1| ribonuclease BN [Fusobacterium sp. D12]
gi|317061601|ref|ZP_07926086.1| ribonuclease BN [Fusobacterium sp. D12]
gi|313687277|gb|EFS24112.1| ribonuclease BN [Fusobacterium sp. D12]
Length = 394
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 90/264 (34%), Gaps = 19/264 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I A+ + E + + + +LS+ P ++ +LG +++ ID
Sbjct: 17 IKHALWKYKEANSNLWVTSLCYYTILSMIPIFAILFSIGTWLGLGEYLLKQIDSHSPLKG 76
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E I +T + + L + L + + + + N + + RS+
Sbjct: 77 EAIELLLTFTDNLLTNARSGVLAGLGFLFLIWSLISMFSIVEKAFNDIWDIEGTRSFVRK 136
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ +L +++ + + I ++ +
Sbjct: 137 ISDYLTFFILLPTLILVSNASSLLIRN-------------------DFLSKILPYCSVLL 177
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + + +P + K + FT I + V F + V +TY+ +Y + +
Sbjct: 178 FFMALFMVMPNTEVKWLPAFIASFFTSIMFSVFQYAFIYLQVLINTYNKIYGSFSVLFIF 237
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
L++L + ILGA L+ +
Sbjct: 238 LIWLRIAWFLIILGAHLSYLLQNR 261
>gi|55823460|ref|YP_141901.1| tRNA-processing ribonuclease BN [Streptococcus thermophilus
CNRZ1066]
gi|55739445|gb|AAV63086.1| tRNA-processing ribonuclease BN,putative [Streptococcus
thermophilus CNRZ1066]
Length = 319
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 115/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + H+ + + ++ +L+VFP IV AN+ +L ++ +
Sbjct: 16 WRPFQVYLSHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNIDTT--DLLKFMNE 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ P + I + + P+ L +S+L + + +L+ ++++ Y E R
Sbjct: 74 HLPKHFYAPAANVIQDIFSTPSGRLLGVSSLTGFWTMIKSLSSLQKAIDKVYGASEHRDV 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I+ +I L+ L + + I L + + +P NL +I N ++
Sbjct: 134 FISHIIGGLLSLVILFLLTFALMLSIIIQSVLRVINQTYPIGSNLTQLILNSIQPLSVAV 193
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G++ ++ LP K + I I+PG IFT + + LF Y++ + S
Sbjct: 194 VFLGMMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIHTLSRLVDIKLFGS 253
Query: 248 IM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L I GA NA+ +
Sbjct: 254 IMIFIFMLWFIFLARILIFGAIFNATYQELKQGE 287
>gi|327489904|gb|EGF21693.1| ribonuclease BN [Streptococcus sanguinis SK1058]
gi|332367079|gb|EGJ44817.1| ribonuclease BN [Streptococcus sanguinis SK1059]
Length = 308
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 120/277 (43%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+++F + + + D + ++ L+SVFP ++ N+ + V
Sbjct: 7 KKFFAKISRNQFLRAFFRFYRAADSELSSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 65 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V + R R++S L + + F+ + ++L ++R ++ L + N
Sbjct: 125 YGVAKSRGLISHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDSQLYQHLQN 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
LF L+ ++ FLP K K +LPG F ++ + +F+ Y+ + +
Sbjct: 185 FTEPLIYALLFAVLVMLYYFLPNVKINKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNH 244
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + ++ I+GA LNAS+
Sbjct: 245 LVDVRFFSSIIMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|322368243|ref|ZP_08042812.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
gi|320552259|gb|EFW93904.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
Length = 417
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 107/267 (40%), Gaps = 15/267 (5%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ I++ E++ +A+ I+ A +S+ P ++ +A F+G F TV+ V
Sbjct: 17 RETIDYAREQEITFLAAGIAYYAFVSILPALLLALAIASFVGGDAFANTVVGTVQSLLSP 76
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ D + A + + +L + + L + +R Y V + T
Sbjct: 77 KAKSIVQDSLSS--ASGRRSATVVGSLVLVWSTLRVFRGLDEAFSRVYDVNVTEPFIDTM 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + + ++ + ++ V + +P + + A + L
Sbjct: 135 TDAAVVLAVIALGVAGVAVVNILLPSL------------SWVPFRRTIVSVALLFGLIPV 182
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ F P + +LPG +F + W +F Y+ + + +S Y L + +
Sbjct: 183 FLPLYYFFPDTDVTVREVLPGTLFATLGWTALQAIFGVYVDSAAQFSA-YGVLGGALLVV 241
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
+LY+ G+ + GA +NA + ++RK
Sbjct: 242 TWLYLGGIVLLFGAVINAVLAGRHFRK 268
>gi|82779556|ref|YP_405905.1| hypothetical protein SDY_4542 [Shigella dysenteriae Sd197]
gi|309787516|ref|ZP_07682128.1| ribonuclease BN-like family protein [Shigella dysenteriae 1617]
gi|81243704|gb|ABB64414.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308925094|gb|EFP70589.1| ribonuclease BN-like family protein [Shigella dysenteriae 1617]
Length = 337
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 IIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQIIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|320199701|gb|EFW74291.1| Inner membrane protein YhjD [Escherichia coli EC4100B]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|293416967|ref|ZP_06659604.1| ribonuclease [Escherichia coli B185]
gi|291431543|gb|EFF04528.1| ribonuclease [Escherichia coli B185]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|15804066|ref|NP_290102.1| hypothetical protein Z4935 [Escherichia coli O157:H7 EDL933]
gi|15833656|ref|NP_312429.1| hypothetical protein ECs4402 [Escherichia coli O157:H7 str. Sakai]
gi|24114790|ref|NP_709300.1| hypothetical protein SF3554 [Shigella flexneri 2a str. 301]
gi|26250155|ref|NP_756195.1| hypothetical protein c4333 [Escherichia coli CFT073]
gi|30065196|ref|NP_839367.1| hypothetical protein S4213 [Shigella flexneri 2a str. 2457T]
gi|74314224|ref|YP_312643.1| hypothetical protein SSON_3869 [Shigella sonnei Ss046]
gi|82545886|ref|YP_409833.1| hypothetical protein SBO_3521 [Shigella boydii Sb227]
gi|91213028|ref|YP_543014.1| hypothetical protein UTI89_C4054 [Escherichia coli UTI89]
gi|110643769|ref|YP_671499.1| putative tRNA-processing ribonuclease (putative membrane protein
YhjD) [Escherichia coli 536]
gi|110807382|ref|YP_690902.1| hypothetical protein SFV_3566 [Shigella flexneri 5 str. 8401]
gi|117625805|ref|YP_859128.1| hypothetical protein APECO1_2926 [Escherichia coli APEC O1]
gi|157157396|ref|YP_001464992.1| putative ribonuclease [Escherichia coli E24377A]
gi|168746940|ref|ZP_02771962.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4113]
gi|168753334|ref|ZP_02778341.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4401]
gi|168759605|ref|ZP_02784612.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4501]
gi|168765929|ref|ZP_02790936.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4486]
gi|168772524|ref|ZP_02797531.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4196]
gi|168779665|ref|ZP_02804672.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4076]
gi|168785387|ref|ZP_02810394.1| putative ribonuclease [Escherichia coli O157:H7 str. EC869]
gi|168797352|ref|ZP_02822359.1| putative ribonuclease [Escherichia coli O157:H7 str. EC508]
gi|187733691|ref|YP_001882211.1| putative ribonuclease [Shigella boydii CDC 3083-94]
gi|188494890|ref|ZP_03002160.1| putative ribonuclease [Escherichia coli 53638]
gi|191165249|ref|ZP_03027092.1| putative ribonuclease [Escherichia coli B7A]
gi|191170403|ref|ZP_03031956.1| putative ribonuclease [Escherichia coli F11]
gi|193061805|ref|ZP_03042902.1| putative ribonuclease [Escherichia coli E22]
gi|193068542|ref|ZP_03049504.1| putative ribonuclease [Escherichia coli E110019]
gi|194428720|ref|ZP_03061257.1| putative ribonuclease [Escherichia coli B171]
gi|195935050|ref|ZP_03080432.1| hypothetical protein EscherichcoliO157_01100 [Escherichia coli
O157:H7 str. EC4024]
gi|208809409|ref|ZP_03251746.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4206]
gi|208811830|ref|ZP_03253159.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4045]
gi|208819809|ref|ZP_03260129.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4042]
gi|209396850|ref|YP_002273001.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4115]
gi|209920982|ref|YP_002295066.1| hypothetical protein ECSE_3791 [Escherichia coli SE11]
gi|215488799|ref|YP_002331230.1| conserved inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217325278|ref|ZP_03441362.1| putative ribonuclease [Escherichia coli O157:H7 str. TW14588]
gi|218556072|ref|YP_002388985.1| hypothetical protein ECIAI1_3672 [Escherichia coli IAI1]
gi|218560597|ref|YP_002393510.1| hypothetical protein ECS88_3935 [Escherichia coli S88]
gi|218691806|ref|YP_002400018.1| hypothetical protein ECED1_4200 [Escherichia coli ED1a]
gi|218697231|ref|YP_002404898.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|237703291|ref|ZP_04533772.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|254795475|ref|YP_003080312.1| inner membrane protein [Escherichia coli O157:H7 str. TW14359]
gi|260846311|ref|YP_003224089.1| hypothetical protein ECO103_4250 [Escherichia coli O103:H2 str.
12009]
gi|260857626|ref|YP_003231517.1| hypothetical protein ECO26_4612 [Escherichia coli O26:H11 str.
11368]
gi|260870248|ref|YP_003236650.1| hypothetical protein ECO111_4336 [Escherichia coli O111:H- str.
11128]
gi|261224837|ref|ZP_05939118.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254266|ref|ZP_05946799.1| hypothetical protein EscherichiacoliO157EcO_00380 [Escherichia coli
O157:H7 str. FRIK966]
gi|291284894|ref|YP_003501712.1| putative ribonuclease [Escherichia coli O55:H7 str. CB9615]
gi|300815263|ref|ZP_07095488.1| putative ribonuclease [Escherichia coli MS 107-1]
gi|300822083|ref|ZP_07102226.1| putative ribonuclease [Escherichia coli MS 119-7]
gi|300907583|ref|ZP_07125219.1| putative ribonuclease [Escherichia coli MS 84-1]
gi|300922346|ref|ZP_07138468.1| putative ribonuclease [Escherichia coli MS 182-1]
gi|300971329|ref|ZP_07171410.1| putative ribonuclease [Escherichia coli MS 45-1]
gi|300976741|ref|ZP_07173560.1| putative ribonuclease [Escherichia coli MS 200-1]
gi|301046589|ref|ZP_07193730.1| putative ribonuclease [Escherichia coli MS 185-1]
gi|301306828|ref|ZP_07212878.1| putative ribonuclease [Escherichia coli MS 124-1]
gi|301326667|ref|ZP_07219994.1| putative ribonuclease [Escherichia coli MS 78-1]
gi|306816126|ref|ZP_07450264.1| putative ribonuclease [Escherichia coli NC101]
gi|307314350|ref|ZP_07593957.1| ribonuclease [Escherichia coli W]
gi|309796159|ref|ZP_07690570.1| putative ribonuclease [Escherichia coli MS 145-7]
gi|312968155|ref|ZP_07782365.1| ribonuclease BN-like family protein [Escherichia coli 2362-75]
gi|331659829|ref|ZP_08360767.1| putative ribonuclease [Escherichia coli TA206]
gi|331670353|ref|ZP_08371192.1| putative ribonuclease [Escherichia coli TA271]
gi|331675012|ref|ZP_08375769.1| putative ribonuclease [Escherichia coli TA280]
gi|331679599|ref|ZP_08380269.1| putative ribonuclease [Escherichia coli H591]
gi|331685177|ref|ZP_08385763.1| putative ribonuclease [Escherichia coli H299]
gi|12518234|gb|AAG58663.1|AE005577_8 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|26110584|gb|AAN82769.1|AE016768_187 Hypothetical protein yhjD [Escherichia coli CFT073]
gi|13363876|dbj|BAB37825.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|24054014|gb|AAN45007.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30043458|gb|AAP19178.1| hypothetical protein S4213 [Shigella flexneri 2a str. 2457T]
gi|73857701|gb|AAZ90408.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81247297|gb|ABB68005.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|91074602|gb|ABE09483.1| hypothetical protein UTI89_C4054 [Escherichia coli UTI89]
gi|110345361|gb|ABG71598.1| putative tRNA-processing ribonuclease (putative membrane protein
YhjD) [Escherichia coli 536]
gi|110616930|gb|ABF05597.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|115514929|gb|ABJ03004.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|157079426|gb|ABV19134.1| putative ribonuclease [Escherichia coli E24377A]
gi|187430683|gb|ACD09957.1| putative ribonuclease [Shigella boydii CDC 3083-94]
gi|187771376|gb|EDU35220.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4196]
gi|188018358|gb|EDU56480.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4113]
gi|188490089|gb|EDU65192.1| putative ribonuclease [Escherichia coli 53638]
gi|189002545|gb|EDU71531.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4076]
gi|189359292|gb|EDU77711.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4401]
gi|189364695|gb|EDU83114.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4486]
gi|189369931|gb|EDU88347.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4501]
gi|189374395|gb|EDU92811.1| putative ribonuclease [Escherichia coli O157:H7 str. EC869]
gi|189380039|gb|EDU98455.1| putative ribonuclease [Escherichia coli O157:H7 str. EC508]
gi|190904651|gb|EDV64357.1| putative ribonuclease [Escherichia coli B7A]
gi|190909211|gb|EDV68797.1| putative ribonuclease [Escherichia coli F11]
gi|192932595|gb|EDV85192.1| putative ribonuclease [Escherichia coli E22]
gi|192958193|gb|EDV88634.1| putative ribonuclease [Escherichia coli E110019]
gi|194413303|gb|EDX29588.1| putative ribonuclease [Escherichia coli B171]
gi|208729210|gb|EDZ78811.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4206]
gi|208733107|gb|EDZ81794.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4045]
gi|208739932|gb|EDZ87614.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4042]
gi|209158250|gb|ACI35683.1| putative ribonuclease [Escherichia coli O157:H7 str. EC4115]
gi|209755498|gb|ACI76061.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209755500|gb|ACI76062.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209755502|gb|ACI76063.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209755504|gb|ACI76064.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209755506|gb|ACI76065.1| hypothetical protein ECs4402 [Escherichia coli]
gi|209914241|dbj|BAG79315.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215266871|emb|CAS11312.1| conserved inner membrane protein [Escherichia coli O127:H6 str.
E2348/69]
gi|217321499|gb|EEC29923.1| putative ribonuclease [Escherichia coli O157:H7 str. TW14588]
gi|218353963|emb|CAV00422.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli 55989]
gi|218362840|emb|CAR00470.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI1]
gi|218367366|emb|CAR05145.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli S88]
gi|218429370|emb|CAR10332.2| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli ED1a]
gi|222035232|emb|CAP77977.1| Inner membrane protein yhjD [Escherichia coli LF82]
gi|226902555|gb|EEH88814.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|254594875|gb|ACT74236.1| conserved inner membrane protein [Escherichia coli O157:H7 str.
TW14359]
gi|257756275|dbj|BAI27777.1| conserved predicted inner membrane protein [Escherichia coli
O26:H11 str. 11368]
gi|257761458|dbj|BAI32955.1| conserved predicted inner membrane protein [Escherichia coli
O103:H2 str. 12009]
gi|257766604|dbj|BAI38099.1| conserved predicted inner membrane protein [Escherichia coli
O111:H- str. 11128]
gi|281602879|gb|ADA75863.1| putative membrane protein [Shigella flexneri 2002017]
gi|290764767|gb|ADD58728.1| Putative ribonuclease [Escherichia coli O55:H7 str. CB9615]
gi|294493563|gb|ADE92319.1| putative ribonuclease [Escherichia coli IHE3034]
gi|300301453|gb|EFJ57838.1| putative ribonuclease [Escherichia coli MS 185-1]
gi|300308478|gb|EFJ62998.1| putative ribonuclease [Escherichia coli MS 200-1]
gi|300400700|gb|EFJ84238.1| putative ribonuclease [Escherichia coli MS 84-1]
gi|300411314|gb|EFJ94852.1| putative ribonuclease [Escherichia coli MS 45-1]
gi|300421286|gb|EFK04597.1| putative ribonuclease [Escherichia coli MS 182-1]
gi|300525446|gb|EFK46515.1| putative ribonuclease [Escherichia coli MS 119-7]
gi|300532155|gb|EFK53217.1| putative ribonuclease [Escherichia coli MS 107-1]
gi|300837947|gb|EFK65707.1| putative ribonuclease [Escherichia coli MS 124-1]
gi|300846671|gb|EFK74431.1| putative ribonuclease [Escherichia coli MS 78-1]
gi|305850522|gb|EFM50979.1| putative ribonuclease [Escherichia coli NC101]
gi|306906065|gb|EFN36585.1| ribonuclease [Escherichia coli W]
gi|307628601|gb|ADN72905.1| putative ribonuclease [Escherichia coli UM146]
gi|308120220|gb|EFO57482.1| putative ribonuclease [Escherichia coli MS 145-7]
gi|312286980|gb|EFR14890.1| ribonuclease BN-like family protein [Escherichia coli 2362-75]
gi|312948081|gb|ADR28908.1| hypothetical protein NRG857_17500 [Escherichia coli O83:H1 str. NRG
857C]
gi|313647628|gb|EFS12078.1| ribonuclease BN-like family protein [Shigella flexneri 2a str.
2457T]
gi|315062801|gb|ADT77128.1| putative lipid IVa transporter [Escherichia coli W]
gi|315252579|gb|EFU32547.1| putative ribonuclease [Escherichia coli MS 85-1]
gi|315286208|gb|EFU45644.1| putative ribonuclease [Escherichia coli MS 110-3]
gi|315295420|gb|EFU54750.1| putative ribonuclease [Escherichia coli MS 153-1]
gi|315295794|gb|EFU55111.1| putative ribonuclease [Escherichia coli MS 16-3]
gi|320173085|gb|EFW48304.1| Inner membrane protein YhjD [Shigella dysenteriae CDC 74-1112]
gi|320182582|gb|EFW57472.1| Inner membrane protein YhjD [Shigella boydii ATCC 9905]
gi|320191431|gb|EFW66081.1| Inner membrane protein YhjD [Escherichia coli O157:H7 str. EC1212]
gi|320193966|gb|EFW68599.1| Inner membrane protein YhjD [Escherichia coli WV_060327]
gi|320639838|gb|EFX09432.1| putative ribonuclease [Escherichia coli O157:H7 str. G5101]
gi|320645338|gb|EFX14354.1| putative ribonuclease [Escherichia coli O157:H- str. 493-89]
gi|320650649|gb|EFX19115.1| putative ribonuclease [Escherichia coli O157:H- str. H 2687]
gi|320655843|gb|EFX23766.1| putative ribonuclease [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320666648|gb|EFX33631.1| putative ribonuclease [Escherichia coli O157:H7 str. LSU-61]
gi|323154028|gb|EFZ40234.1| ribonuclease BN-like family protein [Escherichia coli EPECa14]
gi|323160584|gb|EFZ46525.1| ribonuclease BN-like family protein [Escherichia coli E128010]
gi|323166998|gb|EFZ52737.1| ribonuclease BN-like family protein [Shigella sonnei 53G]
gi|323174170|gb|EFZ59798.1| ribonuclease BN-like family protein [Escherichia coli LT-68]
gi|323179529|gb|EFZ65096.1| ribonuclease BN-like family protein [Escherichia coli 1180]
gi|323182992|gb|EFZ68393.1| ribonuclease BN-like family protein [Escherichia coli 1357]
gi|323189332|gb|EFZ74615.1| ribonuclease BN-like family protein [Escherichia coli RN587/1]
gi|323376611|gb|ADX48879.1| ribonuclease [Escherichia coli KO11]
gi|323944481|gb|EGB40554.1| ribonuclease BN family protein [Escherichia coli H120]
gi|323949763|gb|EGB45647.1| ribonuclease BN family protein [Escherichia coli H252]
gi|323954936|gb|EGB50716.1| ribonuclease BN family protein [Escherichia coli H263]
gi|324007325|gb|EGB76544.1| putative ribonuclease [Escherichia coli MS 57-2]
gi|324014186|gb|EGB83405.1| putative ribonuclease [Escherichia coli MS 60-1]
gi|324021176|gb|EGB90395.1| putative ribonuclease [Escherichia coli MS 117-3]
gi|324116607|gb|EGC10524.1| ribonuclease BN family protein [Escherichia coli E1167]
gi|326337480|gb|EGD61315.1| Inner membrane protein YhjD [Escherichia coli O157:H7 str. 1044]
gi|326340006|gb|EGD63813.1| Inner membrane protein YhjD [Escherichia coli O157:H7 str. 1125]
gi|331053044|gb|EGI25077.1| putative ribonuclease [Escherichia coli TA206]
gi|331062415|gb|EGI34335.1| putative ribonuclease [Escherichia coli TA271]
gi|331067921|gb|EGI39319.1| putative ribonuclease [Escherichia coli TA280]
gi|331072771|gb|EGI44096.1| putative ribonuclease [Escherichia coli H591]
gi|331077548|gb|EGI48760.1| putative ribonuclease [Escherichia coli H299]
gi|332095844|gb|EGJ00852.1| ribonuclease BN-like family protein [Shigella boydii 3594-74]
gi|332750050|gb|EGJ80462.1| ribonuclease BN-like family protein [Shigella flexneri K-671]
gi|332750206|gb|EGJ80617.1| ribonuclease BN-like family protein [Shigella flexneri 4343-70]
gi|332751293|gb|EGJ81696.1| ribonuclease BN-like family protein [Shigella flexneri 2747-71]
gi|332763475|gb|EGJ93714.1| putative membrane conserved inner membrane protein [Shigella
flexneri 2930-71]
gi|332996215|gb|EGK15842.1| ribonuclease BN-like family protein [Shigella flexneri VA-6]
gi|332997049|gb|EGK16665.1| ribonuclease BN-like family protein [Shigella flexneri K-218]
gi|333012454|gb|EGK31835.1| ribonuclease BN-like family protein [Shigella flexneri K-304]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|301025852|ref|ZP_07189342.1| putative ribonuclease [Escherichia coli MS 69-1]
gi|300395818|gb|EFJ79356.1| putative ribonuclease [Escherichia coli MS 69-1]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|197303125|ref|ZP_03168170.1| hypothetical protein RUMLAC_01849 [Ruminococcus lactaris ATCC
29176]
gi|197297780|gb|EDY32335.1| hypothetical protein RUMLAC_01849 [Ruminococcus lactaris ATCC
29176]
Length = 293
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 57/249 (22%), Positives = 114/249 (45%), Gaps = 7/249 (2%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+ P + + + + V+++V +P+ +A I I+QV + G
Sbjct: 35 VLSLIPIFLLLITMVQYTPV--TMNDVMELVLPVFPDTVAPLIRSVIVQVY-TKSNGFIP 91
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+ L A + + GV ++ LN Y +E R+++ R + Y +L + +++ + V
Sbjct: 92 FTLLVALWSAGKGVLSVTYGLNCIYDNIETRNYFYLRFRACFYTVLFLIAIMLSLVLSVF 151
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA----KSKIMSIL 211
A V + P + ++ I R T++ L V+ FLP K+ + L
Sbjct: 152 GNSLSAVVYEHIPFMSKVMNFIIRIRTCLTLVVLTFFWDLVYKFLPNRSNRGKTTLRKQL 211
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG FT W++ + F+ Y+ F+ +++MY +I+ +++LY +LG E+NA
Sbjct: 212 PGAFFTASGWLLLSFFFSVYLDIFTGFTSMYGSFTTIILIMLWLYGCMYIILLGGEINAI 271
Query: 272 MIIYYWRKK 280
+ K+
Sbjct: 272 LEGLGITKR 280
>gi|149174168|ref|ZP_01852796.1| probable serum resistance protein brkB [Planctomyces maris DSM
8797]
gi|148847148|gb|EDL61483.1| probable serum resistance protein brkB [Planctomyces maris DSM
8797]
Length = 325
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 97/287 (33%), Gaps = 22/287 (7%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F + +++ + F+ ++ + I+ + S+ P + + + + V TVI
Sbjct: 2 RFHRLRNVLKRSGSDFLSDECMGSGAAIAYYTIFSLPPLLAIVFAVTTQFWSAEKVSTVI 61
Query: 64 DVVFGAWPEVIAK---------------PITDEILQVLAVPAKGLFTISALAAAYFSSNG 108
+ G E + + +S
Sbjct: 62 NSQLGLPIEQSVSQADNDSSASALNLTRVAERAQPGHQQEHPWWARILGIGILIFSASGV 121
Query: 109 VEALRISLNRAYRVVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
+ L+ +LN+A+ V + RLIS G +++ + L++ + + +
Sbjct: 122 LAQLQGALNKAWNVEPDPRQGGLMSFLKKRLISLGMLVVIGLLLLVSLVLTTFVDEFTRW 181
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
++ G +L ++ T+ + LP A + G T +V
Sbjct: 182 IQNG-ELTGGMLTLMMLINGILTLGLAILLFAATFKVLPDAHIPWRDVFVGAGVTAFLFV 240
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+G Y+ S+ + S++ L+++Y + +LGAE
Sbjct: 241 IGKAGIGWYLQYSEAGSSWGSAATSMIGILIWVYYSSLIILLGAEFT 287
>gi|170681590|ref|YP_001745792.1| putative ribonuclease [Escherichia coli SMS-3-5]
gi|218702287|ref|YP_002409916.1| hypothetical protein ECIAI39_4025 [Escherichia coli IAI39]
gi|218707151|ref|YP_002414670.1| hypothetical protein ECUMN_4023 [Escherichia coli UMN026]
gi|293407139|ref|ZP_06651063.1| inner membrane protein yhjD [Escherichia coli FVEC1412]
gi|293412953|ref|ZP_06655621.1| ribonuclease [Escherichia coli B354]
gi|298382889|ref|ZP_06992484.1| ribonuclease [Escherichia coli FVEC1302]
gi|300897308|ref|ZP_07115742.1| putative ribonuclease [Escherichia coli MS 198-1]
gi|300936731|ref|ZP_07151629.1| putative ribonuclease [Escherichia coli MS 21-1]
gi|331665143|ref|ZP_08366044.1| putative ribonuclease [Escherichia coli TA143]
gi|170519308|gb|ACB17486.1| putative ribonuclease [Escherichia coli SMS-3-5]
gi|218372273|emb|CAR20136.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli IAI39]
gi|218434248|emb|CAR15166.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia coli UMN026]
gi|284923547|emb|CBG36642.1| putative membrane protein [Escherichia coli 042]
gi|291425950|gb|EFE98984.1| inner membrane protein yhjD [Escherichia coli FVEC1412]
gi|291468600|gb|EFF11093.1| ribonuclease [Escherichia coli B354]
gi|298276725|gb|EFI18243.1| ribonuclease [Escherichia coli FVEC1302]
gi|300358914|gb|EFJ74784.1| putative ribonuclease [Escherichia coli MS 198-1]
gi|300458146|gb|EFK21639.1| putative ribonuclease [Escherichia coli MS 21-1]
gi|331057653|gb|EGI29639.1| putative ribonuclease [Escherichia coli TA143]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|194430987|ref|ZP_03063280.1| putative ribonuclease [Shigella dysenteriae 1012]
gi|194420442|gb|EDX36518.1| putative ribonuclease [Shigella dysenteriae 1012]
gi|332084016|gb|EGI89223.1| ribonuclease BN-like family protein [Shigella dysenteriae 155-74]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMSNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|332996917|gb|EGK16536.1| ribonuclease BN-like family protein [Shigella flexneri K-272]
gi|333013396|gb|EGK32768.1| ribonuclease BN-like family protein [Shigella flexneri K-227]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFATGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|3493604|gb|AAC33456.1| unknown [Vitreoscilla sp. C1]
Length = 376
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 35/241 (14%), Positives = 83/241 (34%), Gaps = 8/241 (3%)
Query: 38 SVFPFIVFGANLAGFLGAHQFV-PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
++ PF + + + + + I +E L A L TI
Sbjct: 30 ALVPFFTIALTVISAFPMFEGITRQFQNFITDNLVPQAIYTIINEYLFGFLNNASKLTTI 89
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
+ + + + + N+ + ++R W+ L+ + L V L +
Sbjct: 90 GIIMLVASAILLINTIETAFNQIWGTTKLRPWHTLLLVYGALLTLRPVILGLTI------ 143
Query: 157 PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
L + K + ++ ++L I L ++ +P+ L G ++
Sbjct: 144 -SQLGRLTKQSIFALHYPTWALLLQVSISILVNMILLWLMYRVVPSRYVPAKHALVGALW 202
Query: 217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + + +F+ Y Y +Y A++ LV++ +L + GA L ++ +
Sbjct: 203 SAVILEIAKRIFSSYFGHVGNYQVIYGAFAAVPLFLVWINVLWAILLSGAILTNALSYWK 262
Query: 277 W 277
Sbjct: 263 G 263
>gi|119385540|ref|YP_916596.1| putative ribonuclease BN [Paracoccus denitrificans PD1222]
gi|119375307|gb|ABL70900.1| putative ribonuclease BN [Paracoccus denitrificans PD1222]
Length = 293
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 113/277 (40%), Gaps = 9/277 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + E + +A+ ++ A+ +VFP + L G Q + +
Sbjct: 2 IRDWWQFVLAIFERMDKIHMSLIAAGVAFYAMFAVFPGLAALFALWGLWNDPQVIEQYVH 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTI---SALAAAYFSSNGVEALRISLNRAYR 121
G P+ A I +I ++A L S L A + GV+ L LN AY
Sbjct: 62 ATDGFIPQSAADIIYGQISALVAAGRTQLGWTTAISFLIATVSARAGVDGLIRGLNAAYG 121
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + ++ F + ++ +V++ + + + + F P + +I
Sbjct: 122 VRSH-----STVMGFLLAYVLTLVIVLVIALGLVTIVVVPIAFNFLPDVPLRNWLIGALP 176
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + + ++ + P K+ +I G +F ++W + F+ Y+ +F++Y+
Sbjct: 177 WMAIFFIVLVVIGILYRYGPNVKTPRTAIFTWGSVFAALAWAAASYGFSAYLASFNSYNR 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+Y + +++ L++ Y+ G +LGA +N +
Sbjct: 237 IYGSIGAVIALLMWFYLGGFTVMLGALINVELSRRRR 273
>gi|302556239|ref|ZP_07308581.1| ribonuclease BN [Streptomyces viridochromogenes DSM 40736]
gi|302473857|gb|EFL36950.1| ribonuclease BN [Streptomyces viridochromogenes DSM 40736]
Length = 321
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 80/274 (29%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG+ A ++ +L + P V LA + + +
Sbjct: 33 LRLLADSFVRFRYADGFTNARALAFQVVLGLVPCTVALVGLATSVHTEGVGRVIELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + + A ++ + + NR Y +
Sbjct: 93 IVPGASADIVEDAFEGTRRTAHGDVWSTLALWLGLGFALLNLASAMGQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + L A + LV V VA V + G
Sbjct: 153 RDRPFPRKYARAIVLALAAGLPLVSGFVVLVAGEAVGEAVAETAGWEGGGPQWWGVLDFP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ ++ + + P + G + WV L Y+ + +Y
Sbjct: 213 VGLVLAWVASAVIFRWSPRRVQPGYTWLAFGSAVHLLLWVSATWLLALYVERSGAFGAVY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + V LG A +
Sbjct: 273 GPLTAFVALLLWANLTAVALFLGIAFAAQLEAAR 306
>gi|24379941|ref|NP_721896.1| hypothetical protein SMU.1555c [Streptococcus mutans UA159]
gi|290580080|ref|YP_003484472.1| hypothetical protein SmuNN2025_0554 [Streptococcus mutans NN2025]
gi|24377923|gb|AAN59202.1|AE014987_1 conserved hypothetical protein [Streptococcus mutans UA159]
gi|254996979|dbj|BAH87580.1| hypothetical protein [Streptococcus mutans NN2025]
Length = 310
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 110/273 (40%), Gaps = 5/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + +E++ + + ++ +L++FPF++ ANL +L ++ +
Sbjct: 12 QFVQNFLEYYKSSEMDLSSIAVAYYLILTIFPFLILLANLFPYLHID--TSELLSFMKNN 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + + + P+ L ++ + + S + L+ S+N++Y + R
Sbjct: 70 LPEQLYENTSGIVRGIFNKPSTSLLWLAIVTGLWTMSKSLTFLQKSMNKSYGIQNHRDLI 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ ++ LL L + + L ++ +L I+ N T
Sbjct: 130 LGHIVGIFSSLLVIFFLALAIMLSTFGKTVLTFLYHNSFLNQDLYDILMNLTQPVTAAIF 189
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ L ++ LP + KI ILPG IFT + LF YI + S+
Sbjct: 190 FVALGVLYYILPNVRIKKIRYILPGTIFTSFLFFTMTSLFGTYINYATASMENLRVFGSV 249
Query: 249 --MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + ILGA LNAS Y ++
Sbjct: 250 TLFVLMLWFIVFARILILGAVLNASYQKKYVKE 282
>gi|225011726|ref|ZP_03702164.1| ribonuclease BN [Flavobacteria bacterium MS024-2A]
gi|225004229|gb|EEG42201.1| ribonuclease BN [Flavobacteria bacterium MS024-2A]
Length = 308
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 119/279 (42%), Gaps = 8/279 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------GAHQFVPT 61
++D+I + V+ A IS S +++FPF++F NL F+ F T
Sbjct: 30 IYDLIEMYVIGIVKGALSYRAGSISFSFFMALFPFLLFIINLIPFVDMIPFIHIENFDQT 89
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + P T + P GL + L + + S+NGV A+ S +Y
Sbjct: 90 FLNYIELFLPSETQTFFTGIFEDIRNKPRGGLLSSVFLLSIFLSANGVSAIFGSFEVSYH 149
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V RS++ L S G ++ + + +F + + + + + + +
Sbjct: 150 VKLSRSFFRQYLFSMGISVVLAFLSLFAVIIFFYFEFYI--LNNLESLVPSEVRLTRISQ 207
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
I L ++ + ++ F KI PG + T + + + F YI FSTY+ +
Sbjct: 208 ISFFGLFAYLTVSILYYFGTIEGRKIRFFSPGALMTTLLFFLTTYGFGIYIDNFSTYNQL 267
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y + +++ L++++M +LG ELNA++ + K
Sbjct: 268 YGSIGALLIFLLYIWMNSNILLLGFELNATLTRFKRAPK 306
>gi|315639598|ref|ZP_07894738.1| YihY family protein [Enterococcus italicus DSM 15952]
gi|315484559|gb|EFU75015.1| YihY family protein [Enterococcus italicus DSM 15952]
Length = 313
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 2/248 (0%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I A D + ++ LLS+FP ++ N+ FL + T++ +
Sbjct: 16 QFIEIASNRISTSDIGNTSVVVAYYLLLSLFPLLIAVGNILPFLSINP--NTILPYLQEM 73
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I I I +L + L ++SAL A + +S + L+ ++NRAY V + ++
Sbjct: 74 IPSQIYDFIGPAIKDLLTQGSGKLLSVSALGALWSASQSINGLQTAMNRAYGVEQRSNFI 133
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I R++SF ++ +++V + V + L ++ F + + + T+L L
Sbjct: 134 IVRIVSFFVIIFFMISIVGVFLVMGIGKVILDILQPIFQIPSEWISLFQTIKWPVTILGL 193
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L ++ +P AK K+ S LPG IFT W+ + +F Y + F+ + Y + S +
Sbjct: 194 LAMLTMIYWIVPNAKVKLRSALPGAIFTTAGWMALSQIFGLYAMYFTRRISGYQIIGSFI 253
Query: 250 TCLVFLYM 257
+++L
Sbjct: 254 VLMIWLNF 261
>gi|307294846|ref|ZP_07574688.1| ribonuclease BN [Sphingobium chlorophenolicum L-1]
gi|306879320|gb|EFN10538.1| ribonuclease BN [Sphingobium chlorophenolicum L-1]
Length = 322
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 2/262 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F+I + G+ A +++ +L+++FPF + A +A G Q +
Sbjct: 38 FEIAKRVAVGTYSD-GFIHAGNLAYLSLMTLFPFFIVAAAVASIFGHSQDGLAAVRAFLE 96
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P +A + I+ VL L + L + + +E +R L RAY R +
Sbjct: 97 TVPPGVADVVRQPIIDVLNARTGPLLWLGGLVGLWTVGSLIETIRDILRRAYGTKSTRPF 156
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-YATML 187
+ RL + G L++ ++ + V I ++ + P + I+ ++ +L
Sbjct: 157 WHYRLTAIGITLVSVFAVMFAFSMQVIITGIDQFLHQILPFADQAIQIVALTKLAPMAIL 216
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + ++V L K PG I T + W +L + Y Y LA
Sbjct: 217 CVALYYLYVSLTPSLYKDPRFPKWPGAIATALWWYGVTLLLPVTLSLLGGYDLTYGSLAG 276
Query: 248 IMTCLVFLYMLGVFFILGAELN 269
+M L+F +++G+ ++GAELN
Sbjct: 277 VMITLIFFFLVGLGVVIGAELN 298
>gi|281180560|dbj|BAI56890.1| conserved hypothetical protein [Escherichia coli SE15]
gi|330909577|gb|EGH38091.1| inner membrane protein YhjD [Escherichia coli AA86]
Length = 337
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGVAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|329890898|ref|ZP_08269241.1| ribonuclease BN-like family protein [Brevundimonas diminuta ATCC
11568]
gi|328846199|gb|EGF95763.1| ribonuclease BN-like family protein [Brevundimonas diminuta ATCC
11568]
Length = 331
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 116/279 (41%), Gaps = 10/279 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ DI++ + + + +A ++ LL++FP + + G
Sbjct: 1 MQIPHKGWVDILWRTVMGYFGDRVGFVAGGVTFFLLLALFPTLGAFVTIYGLFADPADAW 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAK---GLFTISALAAAYFSSNGVEALRISLN 117
+ ++ P +A+ + E+ ++ + L + ++ G++ L LN
Sbjct: 61 GQLSFLYEVLPSNVAQFLGAEMTRLAGSSTGQLTFTLIWTLLLTLWAANGGIKTLFYGLN 120
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
AY VE R+ I L+ G+ + A +++ S + V +P+ LA L + +
Sbjct: 121 LAYHEVERRNIVIYNLVCMGFTVSAMAAVMLSSALVVGVPVVLAVF-----GLEDEWAYL 175
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
R L L ++ + P+ +++ + PG +F ++ + LF+ ++ TF
Sbjct: 176 APLRWPLLFLGYAGALALIYRYGPSRARARWRWLTPGALFAASLSLLVSFLFSWFLTTFV 235
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ Y LA+ M L++ + ++GA LNA +
Sbjct: 236 RTDS-YGPLAAAMGFLLWTWFSVQVILMGARLNAEIEHQ 273
>gi|313206524|ref|YP_004045701.1| ribonuclease bn [Riemerella anatipestifer DSM 15868]
gi|312445840|gb|ADQ82195.1| ribonuclease BN [Riemerella anatipestifer DSM 15868]
gi|315023535|gb|EFT36539.1| Ribonuclease BN [Riemerella anatipestifer RA-YM]
gi|325336028|gb|ADZ12302.1| Ribonuclease BN-related protein [Riemerella anatipestifer RA-GD]
Length = 302
Score = 110 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/286 (15%), Positives = 95/286 (33%), Gaps = 10/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M++ ++ I A + + A+ I+ A+ S+ ++ + G G F
Sbjct: 1 MKDNLKFYWETIRKAGADWSNSNADRDAAGIAYYAIFSIPGLLIILIWVMGIIFGDTNFQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNR 118
++ V E AK + ++ + + I + + ++ L+ SLN
Sbjct: 61 QKILQEVTKIMGEDTAKSLDGILISSMIDQDGIIMRIIGVVTLIFGATTLFFQLQKSLNE 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V + + R S G +L+ ++I + I L ++ +
Sbjct: 121 LWGVKAAPKKAILKFLVDRANSLGMILIIGFLMMITMILSTLIGLTNDFISQHLGL--ET 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
II L + + + LP + S+ G T + +G L + Y
Sbjct: 179 YYIIQIINTLVGFLIVVLLFALMFKVLPDVQLSWRSVWVGAFITAFLFTLGKSLLSLYFS 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
F S + S++ ++++ GA K
Sbjct: 239 HFKPTSA-FGAAGSVILIMMWINYTCRLIFFGAVFTKVYTYRRGLK 283
>gi|167748842|ref|ZP_02420969.1| hypothetical protein ANACAC_03616 [Anaerostipes caccae DSM 14662]
gi|167651812|gb|EDR95941.1| hypothetical protein ANACAC_03616 [Anaerostipes caccae DSM 14662]
Length = 271
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 63/272 (23%), Positives = 123/272 (45%), Gaps = 2/272 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ I ++ A ++ + +LS FPF++ +L F+ +I +
Sbjct: 2 LKLIALLNSVIAKAQKDHITAFSAQAAFFTVLSFFPFLIVVLSLMRFVPV--TPKDLIGL 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V PE + + I + + + + + +S G+ ++ LN + + E
Sbjct: 60 VNYYLPEQYSVSLVAVINSLYGKITTTYMSFTIITLLWSASKGILSMMTGLNTIHEIPEK 119
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++++ R IS Y+ +V ++I V + L + +F+P L N +I R
Sbjct: 120 RNYFVLRFISTMYIAFIAVAVLIGIIVLLFGNTLLNQLYQFYPFLSNQHIIFLLIRFGIA 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
F+ ++ FLP+ K ++PGVIF+ W++ + LF+ Y F +S MY GL
Sbjct: 180 FFIFFLVFFIMYRFLPSEHFKARQVMPGVIFSSAGWIILSSLFSIYFDNFKFFSIMYGGL 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
I+ L +LY + +GAELN ++ +
Sbjct: 240 TGILLTLFWLYFCMMILFIGAELNQYIMKNHK 271
>gi|237728838|ref|ZP_04559319.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226909460|gb|EEH95378.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 342
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + A E F + G + I+ + LS+ P ++ AGF+ + +
Sbjct: 55 IIAHLIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFILASHPTLLQDIFSK 114
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 115 ILLNVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGINWMGNLREAIRAQSRDVWE 174
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R ++ L F ++ V L++ + A + + + L
Sbjct: 175 RTPQDQEKIWVKYLRDFVSLIGLLVALIVTLSITSIAGSAQQMIISALYLDGIEWLKPAW 234
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G + + V ++ T+ + +
Sbjct: 235 RLIGLTISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAALGFEVIKMIMTYTLPSLVQ 294
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 295 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|294675580|ref|YP_003576195.1| ribonuclease BN [Rhodobacter capsulatus SB 1003]
gi|294474400|gb|ADE83788.1| ribonuclease BN [Rhodobacter capsulatus SB 1003]
Length = 269
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 9/272 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + + + + +++ ++ A+L+VFP + ++ + + T ++V
Sbjct: 2 HFLFRLRDRLSQTNIFLISAGVAFYAMLAVFPGLTATISIWSTVADPVVIRTYLEVAQNF 61
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFT---ISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + ++ +LA P + +S L A + + GV+AL LN +
Sbjct: 62 IPPEAYAILDAQVSMLLAGPRGVIGWGTLVSVLFALFSARAGVDALVQGLNVIHGSEP-- 119
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ F + L +V LV + + +A +AL + F P +++ A +
Sbjct: 120 ---RNTIFGFLFGYLMTVALVGVMLMAMATIVALPILANFLPFHAVTTVLLSGLPWIAMV 176
Query: 187 LALFIGLIFVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L ++ F P + I G + + W ++ T Y+ F TY+ +Y L
Sbjct: 177 ALMLTVLGVLYRFAPYRPRRRDPIFSLGSVVATLVWGGASIGLTTYLANFGTYNKVYGSL 236
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ L++LY+ + GA LNA +
Sbjct: 237 GAVIALLMWLYLGAFSVLFGAALNAELADRQR 268
>gi|330820880|ref|YP_004349742.1| YihY family protein [Burkholderia gladioli BSR3]
gi|327372875|gb|AEA64230.1| YihY family protein [Burkholderia gladioli BSR3]
Length = 296
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 52/259 (20%), Positives = 94/259 (36%), Gaps = 5/259 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA F + MA+ I+ + S+ P +V +AG F GA V + V
Sbjct: 22 DAFRRFSADHCTTMAASIAFYSAFSLAPMLVMVIAVAGWFFGADAARGEVFNQVHSLIGN 81
Query: 73 VIAKPITDEILQVL--AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + IS + A +S +L +L + E R +
Sbjct: 82 DAAAGVQTIVENAHRRDSNGGAAAAISFVMLAIGASATFSSLNTALGMVWPSQEKRWSSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ +L+ + A + L
Sbjct: 142 FGLVRVRLISFGLVLGVAFLLIVSLLLDTAITFIGRWLWGATPFVLVGNLLQFTAGIAIL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A L G I + + + G LF Y+ T S + S+
Sbjct: 202 ACAFAALLKFLPDAHVTRRDALTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSLA 260
Query: 250 TCLVFLYMLGVFFILGAEL 268
L++LY +LGAE
Sbjct: 261 VLLMWLYFSAAVLLLGAEF 279
>gi|57239224|ref|YP_180360.1| hypothetical protein Erum4970 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161303|emb|CAH58226.1| putative tRNA processing ribonuclease BN [Ehrlichia ruminantium
str. Welgevonden]
Length = 277
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 16/281 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AH 56
+ +F Y A+ +E DG A ++S LLSVFPF+VF L L
Sbjct: 4 KKIRCIFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLLHYYDI 63
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+I ++ P + + I ++++ P L T++ + + +S+ VE +R L
Sbjct: 64 SVSDKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTIL 123
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N+A RV S+ RL+S + ++ + I + +P+ + K
Sbjct: 124 NKACRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVLPVIYEMLNKNLGY------- 176
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ TF
Sbjct: 177 ---FKYAVSELVLFVSITLLYFIIPNVKQNLANVVPGAVLVTFLWTCSSLIFTWYLKTFH 233
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +Y LASI+ L+F Y+L +FFI GAE N + +
Sbjct: 234 QLNIIYGSLASIIASLLFFYILSIFFIYGAEFNYRIKNAFN 274
>gi|317405439|gb|EFV85751.1| BrkB transmembrane protein [Achromobacter xylosoxidans C54]
Length = 325
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 98/275 (35%), Gaps = 7/275 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
++ D+ + + + ++L + S+ P ++ +AG F G + +
Sbjct: 28 LLMDSANQWSTHRASSKGAALALYMVFSLAPMLILVIAVAGAFFGEDAVRSELFSSLRDL 87
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV-EMRS 127
E A+ I + + IS + ++ L+ SL+ + V +
Sbjct: 88 TGERGAEVIQTVLASAHESGGGWIAALISIFVLIFSATTAFAELKASLDDLWEVSGNQKG 147
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ S + L + + + + AL RK++ L + +++
Sbjct: 148 GIHGMVRSRVLSFGLVLVLALFLLISLTVNAALGAARKYYGDLWAASAVATVADWLSSLF 207
Query: 188 ---ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + LP+A+ ++PG I T ++VG Y+ + S Y
Sbjct: 208 SFSVVVALFAVIFKLLPSARISWRDVIPGAIVTAALFLVGKWGIGVYLSRGAAVSA-YGA 266
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ L+++Y F GA + + R+
Sbjct: 267 AGSLIALLLWIYYSAQIFFFGAVFTRQFALRFGRE 301
>gi|58617238|ref|YP_196437.1| hypothetical protein ERGA_CDS_05110 [Ehrlichia ruminantium str.
Gardel]
gi|58416850|emb|CAI27963.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 277
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 16/281 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AH 56
+ +F Y A+ +E DG A ++S LLSVFPF+VF L L
Sbjct: 4 KKIRCIFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLLHYYDI 63
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+I ++ P + + I ++++ P L T++ + + +S+ VE +R L
Sbjct: 64 SVSDKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTIL 123
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N+A RV S+ RL+S + ++ + I + +P+ + K
Sbjct: 124 NKACRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVLPVIYEMLNKNLGY------- 176
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ TF
Sbjct: 177 ---FKYAVSELVLFVSITLLYFIIPNVKQNLANVIPGAVLVTFLWTCSSLIFTWYLKTFH 233
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +Y LASI+ L+F Y+L +FFI GAE N + +
Sbjct: 234 QLNIIYGSLASIIASLLFFYILSIFFIYGAEFNYRIKNAFN 274
>gi|239814770|ref|YP_002943680.1| ribonuclease BN [Variovorax paradoxus S110]
gi|239801347|gb|ACS18414.1| ribonuclease BN [Variovorax paradoxus S110]
Length = 313
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 100/276 (36%), Gaps = 4/276 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
++DA++ F G +A ++ ALLS+ P ++ L +
Sbjct: 12 PLLRHPLRFVWDALKAFRANQGLLLAGAVAYYALLSIVPLLIVSVIAMSHLIEQAELLRT 71
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I +K I E+ L + + + +FSS L ++ +
Sbjct: 72 IGRYLEWLLPGQSKAIVAELSNFL-QHRDVMGPVLFVTMIFFSSLAFSVLESAMAVIFHH 130
Query: 123 V---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R + ++ ++ + Y+L V L++++ V A+ L F +L +
Sbjct: 131 RKADHRRHFLVSAVMPYLYILFLCVGLLLVTLVSGALQLVGQESVDLFGRNWSLSGVSGL 190
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L ++L +PA + + L G + + W + Y T S +
Sbjct: 191 LLYLLGLGGEIFMLTSLYLVMPAGRMSLRHALLGGVTAALLWEATRRVLIWYFSTLSQVN 250
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y L + + L+ L + +LGA++ A
Sbjct: 251 VVYGSLTTAIVVLLSLEIAATLVLLGAQVIAQYERL 286
>gi|16131394|ref|NP_417979.1| putative alternate lipid exporter, suppressor of msbA and KDO
essentiality, inner membrane protein [Escherichia coli
str. K-12 substr. MG1655]
gi|89110491|ref|AP_004271.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. W3110]
gi|157163001|ref|YP_001460319.1| putative ribonuclease [Escherichia coli HS]
gi|170018249|ref|YP_001723203.1| ribonuclease [Escherichia coli ATCC 8739]
gi|170083033|ref|YP_001732353.1| inner membrane protein [Escherichia coli str. K-12 substr. DH10B]
gi|194435880|ref|ZP_03067983.1| putative ribonuclease [Escherichia coli 101-1]
gi|238902611|ref|YP_002928407.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|253771647|ref|YP_003034478.1| ribonuclease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254038700|ref|ZP_04872756.1| inner membrane protein yhjD [Escherichia sp. 1_1_43]
gi|254163444|ref|YP_003046552.1| inner membrane protein [Escherichia coli B str. REL606]
gi|256025753|ref|ZP_05439618.1| conserved inner membrane protein [Escherichia sp. 4_1_40B]
gi|300927984|ref|ZP_07143541.1| putative ribonuclease [Escherichia coli MS 187-1]
gi|300950859|ref|ZP_07164741.1| putative ribonuclease [Escherichia coli MS 116-1]
gi|300955005|ref|ZP_07167415.1| putative ribonuclease [Escherichia coli MS 175-1]
gi|301028222|ref|ZP_07191491.1| putative ribonuclease [Escherichia coli MS 196-1]
gi|301646055|ref|ZP_07245960.1| putative ribonuclease [Escherichia coli MS 146-1]
gi|307140211|ref|ZP_07499567.1| conserved inner membrane protein [Escherichia coli H736]
gi|312972207|ref|ZP_07786381.1| ribonuclease BN-like family protein [Escherichia coli 1827-70]
gi|331644231|ref|ZP_08345360.1| putative ribonuclease [Escherichia coli H736]
gi|586684|sp|P37642|YHJD_ECOLI RecName: Full=Inner membrane protein yhjD
gi|466659|gb|AAB18498.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
gi|1789939|gb|AAC76547.1| putative alternate lipid exporter, suppressor of msbA and KDO
essentiality, inner membrane protein [Escherichia coli
str. K-12 substr. MG1655]
gi|85676522|dbj|BAE77772.1| conserved inner membrane protein [Escherichia coli str. K12 substr.
W3110]
gi|157068681|gb|ABV07936.1| putative ribonuclease [Escherichia coli HS]
gi|169753177|gb|ACA75876.1| ribonuclease [Escherichia coli ATCC 8739]
gi|169890868|gb|ACB04575.1| conserved inner membrane protein [Escherichia coli str. K-12
substr. DH10B]
gi|194425423|gb|EDX41407.1| putative ribonuclease [Escherichia coli 101-1]
gi|226839206|gb|EEH71229.1| inner membrane protein yhjD [Escherichia sp. 1_1_43]
gi|238860240|gb|ACR62238.1| conserved inner membrane protein [Escherichia coli BW2952]
gi|242379041|emb|CAQ33840.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|253322691|gb|ACT27293.1| ribonuclease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975345|gb|ACT41016.1| conserved inner membrane protein [Escherichia coli B str. REL606]
gi|253979501|gb|ACT45171.1| conserved inner membrane protein [Escherichia coli BL21(DE3)]
gi|260447463|gb|ACX37885.1| ribonuclease [Escherichia coli DH1]
gi|299878708|gb|EFI86919.1| putative ribonuclease [Escherichia coli MS 196-1]
gi|300318047|gb|EFJ67831.1| putative ribonuclease [Escherichia coli MS 175-1]
gi|300449835|gb|EFK13455.1| putative ribonuclease [Escherichia coli MS 116-1]
gi|300463991|gb|EFK27484.1| putative ribonuclease [Escherichia coli MS 187-1]
gi|301075726|gb|EFK90532.1| putative ribonuclease [Escherichia coli MS 146-1]
gi|309703928|emb|CBJ03269.1| putative membrane protein [Escherichia coli ETEC H10407]
gi|310334584|gb|EFQ00789.1| ribonuclease BN-like family protein [Escherichia coli 1827-70]
gi|315138098|dbj|BAJ45257.1| conserved inner membrane protein [Escherichia coli DH1]
gi|315618447|gb|EFU99034.1| ribonuclease BN-like family protein [Escherichia coli 3431]
gi|323934696|gb|EGB31086.1| ribonuclease BN family protein [Escherichia coli E1520]
gi|323939498|gb|EGB35707.1| ribonuclease BN family protein [Escherichia coli E482]
gi|323959453|gb|EGB55110.1| ribonuclease BN family protein [Escherichia coli H489]
gi|323971380|gb|EGB66619.1| ribonuclease BN family protein [Escherichia coli TA007]
gi|331036525|gb|EGI08751.1| putative ribonuclease [Escherichia coli H736]
Length = 337
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|76817269|ref|YP_335903.1| putative ribonuclease [Burkholderia pseudomallei 1710b]
gi|76581742|gb|ABA51216.1| putative ribonuclease [Burkholderia pseudomallei 1710b]
Length = 337
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 52 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 111
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 112 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 171
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 172 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 231
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 232 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 290
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 291 VLLMWLYFSAAVLLL 305
>gi|134096441|ref|YP_001101516.1| putative ribonuclease RNase BN (RBN) transmembrane protein
[Herminiimonas arsenicoxydans]
gi|133740344|emb|CAL63395.1| Putative ribonuclease BN [Herminiimonas arsenicoxydans]
Length = 298
Score = 110 bits (274), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/278 (15%), Positives = 105/278 (37%), Gaps = 11/278 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVF 67
+ + +A++ +V++ +M + ++ + S+ P ++ +AGF G +I +
Sbjct: 10 WSLTKEAVQAWVDDFAPSMGAALAYYTIFSLAPMLIIVIAIAGFFFGQTTAQGEIILQLR 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEM- 125
G + A + + V + T+ L ++ L+ +L+R ++V
Sbjct: 70 GMVGDTGAAAVEGLLKSVSKPGQGIIAATLGILTLMIGATAVFGELQSALDRIWKVPPEA 129
Query: 126 ----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RL+SFG ++ L++ + A+ + +L ++
Sbjct: 130 KGGIWKMLRKRLLSFGMIMGLGFMLLVSLILSAALAALGKWWGDVLGTWNIVLQVLNMA- 188
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + ++ F+P A + G T + + +G L Y+ + ++
Sbjct: 189 --VSFGVVTALFALIYKFMPRATIPWRDVWVGAGVTALLFTLGKFLIGLYLGK-TNMASG 245
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ L ++Y F+LGAE +
Sbjct: 246 FGAAGSLVILLAWIYYSAQIFLLGAEFTWVFSQRRLAR 283
>gi|237807236|ref|YP_002891676.1| ribonuclease BN [Tolumonas auensis DSM 9187]
gi|288559245|sp|C4L9W1|Y461_TOLAT RecName: Full=UPF0761 membrane protein Tola_0461
gi|237499497|gb|ACQ92090.1| ribonuclease BN [Tolumonas auensis DSM 9187]
Length = 302
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 95/278 (34%), Gaps = 6/278 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + +A H++ +LLS+ P + ++ +L +
Sbjct: 20 RLFCLRSRRFSAFFWRRVWHDRLPVLAGHLAYVSLLSIVPLLAVVFSVLSWLPRFSYFRR 79
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + + A +I L + + A+ ++N +R
Sbjct: 80 QFELFMFSNFVPETEIAFRYHFSLFVKNASKTTSIGLLMLVLLALLLIAAIDENMNHIWR 139
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R W T + + + + + + I + + +
Sbjct: 140 CRGQRKWLKTITMYSIVLGVVPLLVGGSLLLSSQIQGWALW------HYELVSSLGGGLL 193
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L G++ ++ +P + L G + + V F +YI F TY ++
Sbjct: 194 ELLPYLLSLGGILLLYKVVPNIYVRWQHALLGATLAALLFEVAKEGFGYYIAHFGTYKSI 253
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA I +++LYM + +LGAE A++ + +
Sbjct: 254 YGALAGIPILMIWLYMSWLVVLLGAEFTATLGEWQLNR 291
>gi|324999564|ref|ZP_08120676.1| tRNA-processing ribonuclease BN [Pseudonocardia sp. P1]
Length = 354
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 98/271 (36%), Gaps = 7/271 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
D + A + E G A+ I+ ++L++ P ++ AGF+ G + + ++
Sbjct: 31 RPWLDHLVRAGARYTENHGDHYAAAITYFSVLALVPLLMVAFAAAGFVLRGNEELLQSLQ 90
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + A P I + ++ + + A + I + A Y + LR +L +
Sbjct: 91 DGIASAAPGEIGQLLSGVVDTAI-KQAGAIGLIGLVGALYSGIGWMSNLREALTEQWGQR 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNG 180
+ I RL L+ ++ SF ++ A LG + ++
Sbjct: 150 DDAPPMIKRLAFDLLSLVGLGLALVASFAIASVGGAAGAYLLDLVGLGEVGWARFLLGVA 209
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ ++V LP S + I + + + Y+ T S
Sbjct: 210 AFLLGLAGNWLVFLWVIARLPREPVSFRSAAKAALIGAIGFAILQQVMVVYLGTIGN-SP 268
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A SI+ L+F++ F + AS
Sbjct: 269 AGAAFGSILGLLIFIFFTSRFLLFVTAWAAS 299
>gi|283835903|ref|ZP_06355644.1| putative ribonuclease [Citrobacter youngae ATCC 29220]
gi|291068074|gb|EFE06183.1| putative ribonuclease [Citrobacter youngae ATCC 29220]
Length = 341
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + A E F + G + I+ + LS+ P ++ AGF+ + +
Sbjct: 55 IIAHLIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFILASHPTLLQDIFSK 114
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 115 ILLNVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGINWMGNLREAIRAQSRDVWE 174
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R ++ L F ++ V L++ + A + + + L
Sbjct: 175 RTPQDQEKIWVKYLRDFVSLIGLLVALIVTLSITSIAGSAQQMIISALYLDGIEWLKPAW 234
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G + + V ++ T+ + +
Sbjct: 235 RLIGLTISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAALGFEVIKMIMTYTLPSLMQ 294
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 295 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|269929254|ref|YP_003321575.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
gi|269788611|gb|ACZ40753.1| ribonuclease BN [Sphaerobacter thermophilus DSM 20745]
Length = 313
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 53/273 (19%), Positives = 107/273 (39%), Gaps = 4/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFG 68
D+ + A +F+ G A+ IS L S FP ++ + G+ T+ D V
Sbjct: 35 DLFWRAARNFIRLQGQIYAAAISYYVLFSFFPLLLLSVAVLGWFVRDPDINATITDAVLA 94
Query: 69 AWPEVIA--KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +P+ + + A I + A+ +S ALR LNR + V R
Sbjct: 95 QIPPELGLQEPVEGLLDDLGAPGGGVFGLIGLVGLAWTASGVFGALRRVLNRVFAVPSNR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S+ R I ++ L++ + + + + L + +F L + + + +
Sbjct: 155 SFVHARAIDLLAMICVPTLLILSTLLTLGLRLVRTFASDYFDGL-LIRVAWGVVFLLVPL 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
F + ++ +P + + + G +F + + + F Y+ + T+Y L
Sbjct: 214 ATSFAVFLLLYRLVPNLRPEFADLWAGALFAAVGFELAKAGFGFYVTEVGDFQTLYGPLG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T LVF+Y++ I G + A +
Sbjct: 274 GAVTFLVFVYLVANVVIFGGGIVAERWRDRVGR 306
>gi|161505851|ref|YP_001572962.1| hypothetical protein SARI_04028 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867198|gb|ABX23821.1| hypothetical protein SARI_04028 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 342
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERTP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ V L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLVALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|291548889|emb|CBL25151.1| Predicted membrane protein [Ruminococcus torques L2-14]
Length = 280
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 57/248 (22%), Positives = 109/248 (43%), Gaps = 7/248 (2%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+LS+ P + + F + V++ V +P ++ I + QV + +
Sbjct: 35 VLSLIPIFMLLLTMVQFTPVTKA--DVMEAVLPVFPSTVSPMIESIVNQVYMTSS-SIIP 91
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
++ L A + + GV ++ LN Y E R+++ R + Y L V +++ + V
Sbjct: 92 VTILVALWSAGKGVLSVTYGLNCIYENTETRNYFYLRARACLYTFLFLVAIMLSLVLSVF 151
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA----KSKIMSIL 211
V + P L ++ + RIY T+ L V+ FLP K+ + L
Sbjct: 152 GNSISVIVYEHAPFLSKVIHKVVQLRIYFTLPLLTFFWDLVYKFLPNRGAAGKTTLRKQL 211
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG FT W+ + +F+ Y+ F ++ MY +I+ +++LY +LG E+NA
Sbjct: 212 PGAFFTACGWMALSFIFSIYLDIFKGFTNMYGSFTTIILVMLWLYGCMYIILLGGEINAI 271
Query: 272 MIIYYWRK 279
+ + R+
Sbjct: 272 LEGFRSRR 279
>gi|238063597|ref|ZP_04608306.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
gi|237885408|gb|EEP74236.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
Length = 357
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 90/271 (33%), Gaps = 3/271 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA F DG++ + +L L+V PF++ L LGA + V D V
Sbjct: 57 WRLLRDAFVRFRYGDGFSHSRAFALQLCLAVVPFMIALTGLITDLGADEGGRVVADTVLA 116
Query: 69 AWPEVIAKPITDEILQVLAV--PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + D ++ + + L + + + NR Y V R
Sbjct: 117 LTPGQSEQMVEDLLVDSERTEDAGELALALGLLTGIVALTTTMAQIERGANRIYGVERDR 176
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
L + LLA V + + V VR+ + + R ++
Sbjct: 177 PALWKYLRASVLALLAGVPALTGFLILVGGGAMGDSVRRNYTWGDAATVAWDVARWPLSL 236
Query: 187 LALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + + P + + G W + ++L Y+ + Y L
Sbjct: 237 GLTVLAVALLFRHAPRRNQPGLSWLFFGAGIATALWWLASLLLAAYVRFSDGFGQTYGAL 296
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+M L++ + G+ G A +
Sbjct: 297 TGMMALLLWANLTGMALFGGLAFAAQLEAMR 327
>gi|332345485|gb|AEE58819.1| conserved hypothetical protein [Escherichia coli UMNK88]
Length = 337
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 93/284 (32%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISTFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|120612666|ref|YP_972344.1| ribonuclease BN [Acidovorax citrulli AAC00-1]
gi|120591130|gb|ABM34570.1| ribonuclease BN [Acidovorax citrulli AAC00-1]
Length = 316
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/283 (16%), Positives = 102/283 (36%), Gaps = 12/283 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + ++ A +V++ +M + +S ++ S+ P +V ++AG + +
Sbjct: 4 KNLKSSWALVKQAASSWVDDYAPSMGAALSYYSVFSLAPLLVIVISIAGLVFGEEAARGE 63
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAY 120
+ A +E+L A PA G+ I ++ L+ +L+R +
Sbjct: 64 VFAQLSGLMGTDAAAAVEELLNAAARPATGVASAVIGLGVLLVGATTVFGELQDALDRIW 123
Query: 121 RVVEM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
R R +SFG +L + L++ + A+ + F L
Sbjct: 124 RAPVREGATGLWGLLRARFLSFGMILGIAFLLMVSLVMSAAVSALGKWWAPAFGGWEVLA 183
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + ++ +P + + G T + + VG +L YI
Sbjct: 184 QAINAA---VGFALTTVVFATIYKIMPRVSVRWHDVWLGAAITAVLFTVGRMLIGLYIGK 240
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ ++ + S++ V++Y F++GAE +
Sbjct: 241 TA-LASGFGAAGSLVVIFVWVYYSAQIFLMGAEFTWVYARTFG 282
>gi|319941676|ref|ZP_08015999.1| hypothetical protein HMPREF9464_01218 [Sutterella wadsworthensis
3_1_45B]
gi|319804797|gb|EFW01659.1| hypothetical protein HMPREF9464_01218 [Sutterella wadsworthensis
3_1_45B]
Length = 378
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/278 (17%), Positives = 102/278 (36%), Gaps = 8/278 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + ++ A+ E +AS ++L+ LLS+ P + +
Sbjct: 16 RQLLNTLRNLAGFAVARMREAQLQEVASSMTLTTLLSLVPLLAVSLAAFAAFPSFSETRA 75
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + + + L+V + A GL A + ++ +++NR +R
Sbjct: 76 ALEEAVMSVLPLSYSEVIMKYLKVFSDHASGLGAFGLAGLALTALLMIDKFFVTVNRIFR 135
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V MRSW +I + + L + + + + A G L +I
Sbjct: 136 VRRMRSWAQRAMIYWALLTLGPIAIALSITLSTQAIRIAAGAAGTGGLPGWLFALIQ--- 192
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ IG + +P + L G ++ V F +YI T T S++
Sbjct: 193 ----IILQTIGYAILFKLVPNCRVPFTHALTGGAAVALAGQVFREAFEYYI-TAGTLSSI 247
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + L++ Y+ + GA + A++ +
Sbjct: 248 YGAFVAFPVFLLWFYIAWMLVFAGAAITATLPQLTSGR 285
>gi|58579184|ref|YP_197396.1| hypothetical protein ERWE_CDS_05200 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417810|emb|CAI27014.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 277
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 16/281 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AH 56
+ +F Y A+ +E DG A ++S LLSVFPF+VF L L
Sbjct: 4 KKIRCIFKCSYYAVVDMIEHDGIEHAGYLSFVILLSVFPFLVFFMALMSNLAQLLHYYDI 63
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+I ++ P + + I ++++ P L T++ + + +S+ VE +R L
Sbjct: 64 SVSDKLIILITDNIPSEVISGLMPRIQEIISGPPHSLLTLAVIGTIWTASSAVEGIRTIL 123
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N+A RV S+ RL+S + ++ + I + P+ + K
Sbjct: 124 NKACRVSSPPSYIFRRLLSIFQFISITLAMTIAMICIIVFPVIYEMLNKNLGY------- 176
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + L LF+ + ++ +P K + +++PG + W +++FT Y+ TF
Sbjct: 177 ---FKYAVSELVLFVSITLLYFIIPNVKQNLANVVPGAVLVTFLWTCSSLIFTWYLKTFH 233
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +Y LASI+ L+F Y+L +FFI GAE N + +
Sbjct: 234 QLNIIYGSLASIIASLLFFYILSIFFIYGAEFNYRIKNAFN 274
>gi|311746934|ref|ZP_07720719.1| serum resistance protein [Algoriphagus sp. PR1]
gi|126578626|gb|EAZ82790.1| serum resistance protein [Algoriphagus sp. PR1]
Length = 327
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 110/283 (38%), Gaps = 10/283 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGA-NLAGFLGAHQFVP 60
+ + ++ + + D +++ I+ A+LS+ +V ++ G
Sbjct: 15 KFKVRHIPSLLALTFKRWAATDPARLSAIIAYYAVLSLPALLVIVVNSVGSIWGVDAVTG 74
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + G A + + I + I + ++ L+ISLN
Sbjct: 75 RLSSQIEGIVGADTASIVQEMIASTQLGGKSTVATVIGIGTLIFGATGVFYHLKISLNEI 134
Query: 120 YRVVEMRSWYIT-----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ + + RLISFG+VL+ L++ + A+ + Y+++ P + +L
Sbjct: 135 WELKMTENIGWFKLVKDRLISFGFVLVLGFLLLVSFVLTAALSILSEYIKEQLPDV--IL 192
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + ++ + + + +LP AK K S+ G T + +V+G VL Y
Sbjct: 193 YLAFGLDWIISISVISLLFALIFRYLPDAKIKWKSVWVGAFLTALLFVLGEVLLGLYFG- 251
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ + Y SI+ L+++ + F GAE I Y
Sbjct: 252 ATDPGSTYGAAGSIILILLWVSYSCLIFFFGAEFTKVFSIKYG 294
>gi|187925962|ref|YP_001892307.1| ribonuclease BN [Ralstonia pickettii 12J]
gi|241665445|ref|YP_002983804.1| ribonuclease BN [Ralstonia pickettii 12D]
gi|187727716|gb|ACD28880.1| ribonuclease BN [Ralstonia pickettii 12J]
gi|240867472|gb|ACS65132.1| ribonuclease BN [Ralstonia pickettii 12D]
Length = 329
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 103/286 (36%), Gaps = 8/286 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R+ F I+ A + + + + +S L S+ P +V ++AG F G
Sbjct: 10 RDVFRRTARILLGAAQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRA 119
+ + G A + + + ALA ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGAQGAAAVETILAATKRSGHGLFAAVMALALLVVGATTAFSELKDSLDEL 129
Query: 120 YRVVEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V +RL+SF VL+ + L++ + A+ + + + + G
Sbjct: 130 WDVPPRQQPGLWGLLRSRLLSFSLVLVLAFLLLVSLIINAALAVLERFWGAIWESAGLFA 189
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + + + + LP + + G + T + + +G L Y+
Sbjct: 190 PIAEAFSSVFSFAVVSLLFGTIFKMLPETRVAWRDVALGAVVTALLFTLGKHLIGLYLGN 249
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 250 -SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALQFGSRQ 294
>gi|312195054|ref|YP_004015115.1| ribonuclease BN [Frankia sp. EuI1c]
gi|311226390|gb|ADP79245.1| ribonuclease BN [Frankia sp. EuI1c]
Length = 452
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 106/275 (38%), Gaps = 9/275 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ A+ + + +A+ LLS+ P ++ G+LG V +
Sbjct: 132 RVAARAMSNAWRDRVLGLAAEAGFWQLLSLPPLLLALLGSIGYLGDALGSDAVNSIRNSL 191
Query: 70 WPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + Q+L + +I + + + S + ++ AY
Sbjct: 192 LRGADDLLTADVVDDVVRPTVDQILTHGRPDVISIGFVLSLWTGSTAMATFVNTITIAYG 251
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
++RS +R+++ ++ +T +I+ V P LA + + + L++ +
Sbjct: 252 QRDLRSAVRSRIVALRLFIIQVITGIILLPALVLGPGLLAELLRAKHHP-TIELLLKSAF 310
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L ++ + LPG +F + W+VG+ + Y+ +
Sbjct: 311 WPVVAVVALTVLTSLYHQALPQRRPWRRALPGAVFALVGWLVGSYVLRLYLERVFGNELV 370
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y LA+ L+F Y+ G+ +LGAELNA++
Sbjct: 371 YGSLAAPAAALLFFYITGLAVLLGAELNAALDQRR 405
>gi|196231818|ref|ZP_03130674.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
gi|196223940|gb|EDY18454.1| ribonuclease BN [Chthoniobacter flavus Ellin428]
Length = 311
Score = 109 bits (273), Expect = 4e-22, Method: Composition-based stats.
Identities = 45/269 (16%), Positives = 100/269 (37%), Gaps = 7/269 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV--PTVIDVVF 67
I++ A+ + E DG A+ + A ++FP IV ++ ++ V ++ +
Sbjct: 24 HILWRAVVKYDETDGEQRAASFAYYAFFAMFPLIVLLVTISTNFFGNRAVATDRIMSYIA 83
Query: 68 GAWPEVIAKP-ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + K I+ A+ + +AL +NRA+ +
Sbjct: 84 PYMPLDTKDSKMIVTTIDGVVQSRKSAGIIAFGILAWSALKFFQALVHGVNRAWGTKQYS 143
Query: 127 SWYI----TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
W + + + L T++ F +V L
Sbjct: 144 WWRMPIKNLAMTAILASALLLGTIIPAIFKYVEYFYWTHSWEVHLDFWFVKPLFDNVLYP 203
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ LF G + + F P ++ + + P +F ++ + LF Y ++ +Y
Sbjct: 204 LVPLVVLFYGFVMFYKFAPRRRTLLREVWPAALFVTLALEILQRLFILYTRNIGHFNALY 263
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+++ L+++Y+ G I+G L A+
Sbjct: 264 GTFGTVVALLLWIYLSGSIIIMGGCLCAA 292
>gi|94314728|ref|YP_587937.1| ribonuclease BN, putative [Cupriavidus metallidurans CH34]
gi|93358580|gb|ABF12668.1| ribonuclease BN, putative [Cupriavidus metallidurans CH34]
Length = 321
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 99/274 (36%), Gaps = 7/274 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFG 68
++ +I +++ + + +S L S+ P +V ++AG F GA + +
Sbjct: 34 RVVSASINSWLDHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAEAARGEIFAQIQD 93
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEM-R 126
A I + G+ I+ +++ L+ SL+ +
Sbjct: 94 LVGAKGAAAIEGILAATHRAGGSGVAAVIATGILFVGATSAFAELKSSLDDIWHAPPPAG 153
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG---NLLLIIWNGRIY 183
+ + L + + L M V + + ALA + +F+ L +
Sbjct: 154 AGWQKLLRARLLSFSIVLVLAFMLLVSLIVNAALAVIDRFWGQLWTATWFAPVAEGISTL 213
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + + LP A+ ++ G + T + + VG L Y+ S ++ Y
Sbjct: 214 FSFAVVTALFAVIFKMLPNARIAWRDVMMGSVITALLFAVGKRLIGLYLGN-SAVASSYG 272
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S++ ++++Y F GAEL + +
Sbjct: 273 AAGSVVALMLWIYYSAQIFFFGAELTRQYALQFG 306
>gi|325287381|ref|YP_004263171.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
gi|324322835|gb|ADY30300.1| ribonuclease BN [Cellulophaga lytica DSM 7489]
Length = 301
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/276 (18%), Positives = 112/276 (40%), Gaps = 10/276 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFG 68
++ + ++ +D + +++ ++ +L++ +V N+ G + G + + +
Sbjct: 17 SLLKETYTSWMADDPFRLSAIVAYYTVLALPALLVIIINVVGSIWGIDIVQGNLTNEISS 76
Query: 69 AWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A AK I + I + I + ++ L+ISLN +++
Sbjct: 77 ALGSDAAKAIENIIGETQNSNKNLTSTIIGIGTLLFGATGVFYQLKISLNEIWKIKPNPK 136
Query: 128 WYITRL-----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
I ++ ISF ++L+ L++ V AI Y+R+ P LL + +
Sbjct: 137 AKIWKIVTDRAISFAFILVIGFLLLVSFIVTTAISALNNYIREVLP--EVLLYLAYILDF 194
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ + I + +LP AK K ++ G I T + +V+G +L Y + + Y
Sbjct: 195 SLSVGIISILFALMFKYLPDAKIKWKTVWIGAILTALLFVIGKLLLGIYFGQ-ADPGSTY 253
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
SI+ L+++ + GAE Y +
Sbjct: 254 GAAGSIVLILLWVSYSSLILFFGAEFTYVYAKRYGK 289
>gi|73539157|ref|YP_299524.1| ribonuclease BN [Ralstonia eutropha JMP134]
gi|72122494|gb|AAZ64680.1| Ribonuclease BN [Ralstonia eutropha JMP134]
Length = 329
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 49/267 (18%), Positives = 98/267 (36%), Gaps = 7/267 (2%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEVIA 75
+ + + + +S L S+ P +V ++AG F GA + + + E A
Sbjct: 45 QSWFAHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAEAARGEIFEQLQDLVGEQGA 104
Query: 76 KPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEM-RSWYITRL 133
I + G+ I+ +++ L+ SL+ + V + + L
Sbjct: 105 SAIQSILAATHRAGGSGVAAIIATGILFVGATSAFAELKSSLDDIWHVPVPATAGWQQLL 164
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG---NLLLIIWNGRIYATMLALF 190
S + L +M V + + ALA + +F+ AL + + +
Sbjct: 165 RSRLLSFSLVLVLALMLLVSLIVNAALAVIDRFWGALWTQSWFAPVADVLSTLFSFAVVT 224
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ LP A+ + G I T + + VG L Y+ S ++ Y S++
Sbjct: 225 ALFAVIFKMLPNARIAWRDVTMGAIITAVLFSVGKRLIGLYLGN-SAVASSYGAAGSVVA 283
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYW 277
++++Y F GAEL + +
Sbjct: 284 LMLWVYYSAQIFFFGAELTRQYALQFG 310
>gi|282858887|ref|ZP_06268028.1| YihY family protein [Prevotella bivia JCVIHMP010]
gi|282588348|gb|EFB93512.1| YihY family protein [Prevotella bivia JCVIHMP010]
Length = 446
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 97/264 (36%), Gaps = 3/264 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ +Y + W A+ ++ + ++++ P +A G ++
Sbjct: 32 LVYIAQRLYLVFTGLFVDKHWGYAAQLTYNTMMALIPMFAAIIAIARGFGFEDYIVEWCK 91
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F P + + + IS + Y + + + N + V +
Sbjct: 92 HIFANQPNTAKVVVNLAKSYIDYTHTGVVLGISLVWMLYSVISLFNNIEVVFNGIWGVKK 151
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS ++ +TL+++S + + L + F L +I
Sbjct: 152 ERSVGRAITDYVSILIFLPLTLILLSGLSIFFQSILVNLPNFKVLTPLLQGLIG---FIL 208
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L I I ++ LP K +I + + I +V ++ H+ + F++Y+ +Y
Sbjct: 209 PLAILTIIFILMYTLLPNTKVRISMVWLPALLAAIGIIVIQNVYIHFQILFASYNLIYGS 268
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
LA++ +++L + I AEL
Sbjct: 269 LAALPLLMLWLQLSWYICIGFAEL 292
>gi|229916047|ref|YP_002884693.1| ribonuclease BN [Exiguobacterium sp. AT1b]
gi|229467476|gb|ACQ69248.1| ribonuclease BN [Exiguobacterium sp. AT1b]
Length = 273
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 6/272 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ ++ F E + A+ ++ +LS FPF++F + GFL VI +
Sbjct: 3 QVFLTVVKRFFTERFFDQAAMLAYYFILSTFPFLLFVLGIVGFLPFTS--GDVIQALSLI 60
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE K + I V L + S L A + SS V++L +LN AYR V ++++
Sbjct: 61 MPEASYKLLEGNIEAVFDNSKLKLASFSILPALWISSMAVQSLVRALNDAYRAVRNKAFW 120
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVA---IPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
L L L V V + +YV + I + R
Sbjct: 121 RGVLQDIAITLALMFVLPFSLLVPVIETALREISSYVLFIDEIVTTYAQIWFYFRWIIGT 180
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
LF +FV+ +LP+ + G F + ++ + +F++Y F+ Y Y L
Sbjct: 181 SLLFTVFVFVYKWLPSVSGTFKNSWAGAAFATVGILLVSNVFSYY-SQFANYEQFYGQLG 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + L++ Y+ +LG LNA++I +
Sbjct: 240 AFIVLLIWFYLAASVILLGGLLNATLIERKEK 271
>gi|325912154|ref|ZP_08174552.1| YihY family protein [Lactobacillus iners UPII 143-D]
gi|325476104|gb|EGC79272.1| YihY family protein [Lactobacillus iners UPII 143-D]
Length = 306
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 8/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE------MRSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQHSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F T Y + + + L
Sbjct: 199 NTYINYTIPNIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASMIIYYW 277
++L + + F++G LNA++ +
Sbjct: 259 MWLNLAAILFLIGVCLNATISYIKY 283
>gi|157149123|ref|YP_001456442.1| hypothetical protein CKO_04962 [Citrobacter koseri ATCC BAA-895]
gi|157086328|gb|ABV16006.1| hypothetical protein CKO_04962 [Citrobacter koseri ATCC BAA-895]
Length = 342
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 96/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 55 VIAHLIRAAERFNDRLGNQFGAAITYFSFLSMIPVLMVSFAAAGFILASHPTLLEDIFNK 114
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 115 ILMNVSDPTLASTLKSTINTAVQQRTTVGLVGLGIALYSGINWMGNLREAIRAQSRDVWE 174
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R +I L F ++ V L+I + A + + ++ L
Sbjct: 175 RTPQDQEKIWIKYLRDFVSLIGLLVALIITLSITSIAGSAQQMIISALYLDSIEWLKPAW 234
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 235 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK 294
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 295 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|239926821|ref|ZP_04683774.1| ribonuclease BN [Streptomyces ghanaensis ATCC 14672]
gi|291435160|ref|ZP_06574550.1| ribonuclease BN [Streptomyces ghanaensis ATCC 14672]
gi|291338055|gb|EFE65011.1| ribonuclease BN [Streptomyces ghanaensis ATCC 14672]
Length = 321
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 82/274 (29%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG+ A ++ +L + PF V LA V +
Sbjct: 33 LRLLTDSFARFRYADGFTNARALAFQVVLGLVPFTVALVGLATSAHTESVGRVVELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + + A ++ + + NR Y +
Sbjct: 93 IVPGASADLVQDAFDGTRRSAHGDIAATLALWLGLGFALLNLASAMGQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + L A + L++ V VA V + G+ +
Sbjct: 153 RDRPFPRKYGRAVLLALTAGLPLMLGFVVLVAGDAVGDAVARVVGGPGSGTGWWGALDVP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ + + P + G + WV L Y+ + +Y
Sbjct: 213 VGLALAWVASAVIFRWSPRRVQPGYTWLAFGSAVHLLLWVAATWLLALYVEGSGAFGALY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + V LG A +
Sbjct: 273 GPLTAFVALLLWANLTAVALFLGIAFAAQLEAAR 306
>gi|325955208|ref|YP_004238868.1| ribonuclease BN [Weeksella virosa DSM 16922]
gi|323437826|gb|ADX68290.1| ribonuclease BN [Weeksella virosa DSM 16922]
Length = 328
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 102/270 (37%), Gaps = 4/270 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
++D++ ++ + + I+ + S+FPFI+F +L + ++ + ++
Sbjct: 30 LYDLLKVFWIRVMKGNFPVRSGAIAWTLFFSLFPFILFLFSLLPKIPHYEELKLLLFHQF 89
Query: 66 VFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLN-RAYRVV 123
+ P I K + I K + + + SSNGV+ + N V
Sbjct: 90 LPQIIPNSIGKEVIGYIDITTQQQEQKSVNWWFMIFTIFMSSNGVQGIINGFNVSYQDVF 149
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R+ RLIS + +V L++ + + Y+ +
Sbjct: 150 IKRNNNKQRLISLILTIFFTVFLILQLTLLYYTGIIWKYLAETKFFFDLSKSSRLINMTS 209
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
M + H +++PG + + + ++ F Y+ F+ +Y
Sbjct: 210 VIMFYFLSMCMLYHYGPNNQDKSKSTVVPGAVLSTLLFITTLFGFNVYLKHFNNLDLLYG 269
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L +M ++F+Y+ + ++G ELN S+
Sbjct: 270 SLGLVMLVMIFVYVNVIILLVGYELNMSLT 299
>gi|296105252|ref|YP_003615398.1| putative ribonuclease [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295059711|gb|ADF64449.1| putative ribonuclease [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 341
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 96/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 54 MIAHLIRAAERFNDRMGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFNK 113
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + L A Y N + LR ++ R V
Sbjct: 114 ILNNVSDPTLATTLKSTINTAVQQRTTVGIVGLLIALYSGVNWMGNLREAIRAQSREVWE 173
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R ++ F ++ V LV+ + A + + + L
Sbjct: 174 RKPQDQEKIWVKYFRDFVSLIGLLVALVVTLSITSVAGSAQQMIISALYLDYIDWLKPAW 233
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G + I + V ++ T+ + +
Sbjct: 234 RGIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTLLAAIGFEVIKIVMTYTLPSLVK 293
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 294 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKGDTRMP 336
>gi|283787835|ref|YP_003367700.1| hypothetical protein ROD_42851 [Citrobacter rodentium ICC168]
gi|282951289|emb|CBG90984.1| putative membrane protein [Citrobacter rodentium ICC168]
Length = 343
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLLRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFSKILT 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLAATLKSTINTAVQQRTTVGLVGLGVALYSGVNWMGNLREAIRAQSRDVWERSS 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+I L F ++ V L+I + A + + ++ L
Sbjct: 178 QDQEKIWIKYLRDFISLIGLLVALIITLSITSVAGSAQQMIISALYLDSIEWLKPAWRLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKRALIRGTFIAAIGFEVIKIIMTYTLPALVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|282864766|ref|ZP_06273820.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282560191|gb|EFB65739.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 399
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 101/274 (36%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ +I D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 32 WRLIKDTVNSCMEYRILGLAAEAAFFTLLSLPPLLLGLIGLLGYVDEWTSTTTVASIERN 91
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + V + +I A + S V ++ Y
Sbjct: 92 ILSAVQTVLSERGVNDIAKPLLEDVTTGARPDVISIGFAIALWSGSRAVNVFIETITVMY 151
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A V ++ + V P + + ++
Sbjct: 152 GLDGHRGIVKTRLLAFLLYVVALVLGSVVLPLLVVGP------DRVVEFVPWGTELLAVL 205
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ L ++ +S M +PG + WV+G+ L Y+ + T
Sbjct: 206 YWPLVIVLSIAFLTTLYHVSVPVRSPWMEDVPGALVALAMWVLGSFLLRIYLTSTVEGPT 265
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 266 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 299
>gi|227499889|ref|ZP_03929982.1| ribonuclease [Anaerococcus tetradius ATCC 35098]
gi|227217998|gb|EEI83271.1| ribonuclease [Anaerococcus tetradius ATCC 35098]
Length = 320
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/296 (16%), Positives = 111/296 (37%), Gaps = 20/296 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + + V+ D ++ +S L + P ++ ++ + +
Sbjct: 1 MKIKKPKTKRFLLNLLNRVVKHDIMTYSAALSFYLLQASIPLMMVLVSVLSYFL--EGKE 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + P+ K I + I + + + + T++ A + +++GV L ++N A
Sbjct: 59 DLIINLLEFLPKTTNKLILEAIDILIASSQSPTVTTLTIFFALFSATSGVNKLINAINHA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF------------ 167
Y + + R++S + ++ LV + V +
Sbjct: 119 YGLKNNKQAIKQRIMSVLFTIIFISLLVFVLIFQVYNTSIIGIFNAQIIEKFTIHFNTNV 178
Query: 168 --PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA---KSKIMSILPGVIFTWISWV 222
I I L + + + F + + P+ + + G +F I+
Sbjct: 179 QKGLDMISSPIFKLTSIAIPFLIMAVAVGFFYRYSPSNASNRISVKEAFCGGLFATIASF 238
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + +++++ FS S +Y LA I+ ++L M+ ILGAE A+ Y
Sbjct: 239 IASFIYSYFTNNFSNQSLVYGALAGILALFIWLLMISTILILGAECIAAYREGYKE 294
>gi|312874248|ref|ZP_07734282.1| YihY family protein [Lactobacillus iners LEAF 2052A-d]
gi|311090318|gb|EFQ48728.1| YihY family protein [Lactobacillus iners LEAF 2052A-d]
Length = 306
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 8/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE------MRSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQQSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F T Y + + + L
Sbjct: 199 NTYINYTIPNIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASMIIYYW 277
++L + + F++G LNA++ +
Sbjct: 259 MWLNLAAILFLIGVCLNATISYIKY 283
>gi|223940104|ref|ZP_03631967.1| ribonuclease BN [bacterium Ellin514]
gi|223891206|gb|EEF57704.1| ribonuclease BN [bacterium Ellin514]
Length = 548
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 63/200 (31%), Gaps = 5/200 (2%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + L ++ + + + + + + N + V RSW +
Sbjct: 193 QVAKQINEFIQNTRTGTLGLTGSVLLVFVAISMLSRIEEAFNDIWGVTRGRSWLSRIVQY 252
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ + L + L + + L L + + ++ L +
Sbjct: 253 WAVITLGPIFLALALGLSSGPQLLATK-----RFLEQMPVASGLLFKLLPVVVLCLSFGL 307
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +P K + + G I W + +Y+ T S Y L + +V L
Sbjct: 308 FYMLMPNTKVSWKAAVVGGTVGGILWHFNNMFSVYYVSRVVTNSRFYGSLGMVPVFMVGL 367
Query: 256 YMLGVFFILGAELNASMIIY 275
Y + + GA++ +
Sbjct: 368 YFSWLILLFGAQVAYAYQNR 387
>gi|300712393|ref|YP_003738207.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299126076|gb|ADJ16415.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 356
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 86/262 (32%), Gaps = 13/262 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
EE+ MA I+ A +S+ P + +G + P
Sbjct: 13 RAVAREVSEENVTFMAGSIAYQAFVSLIPLLALLFLAVAVVGDQSLANEITGYTQSYLPP 72
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ I A G I A+ + + L + + Y V S+
Sbjct: 73 SAQTLLDGYIAGEAGSSAGGAGVIGAVTLLWGTLKIFRGLDTAFSEIYDTVADNSF---- 128
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L + ++ + + + A V A + I ++ L +
Sbjct: 129 --------LDQLVDGLVVLLTIGGAVLGAVVATTAFAALPEVSFIGLLNPLVLVVGLTVV 180
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA-GLASIMTC 251
++ P +LPGV+ + W + LF YI ST + + +I+
Sbjct: 181 FYPMYFRFPDVDLSFREVLPGVVVAAVGWALLQALFQVYIGYAGGGSTSGSDVIGAILLL 240
Query: 252 LVFLYMLGVFFILGAELNASMI 273
L +LY G+ +LGA +NA +
Sbjct: 241 LTWLYFSGLVLLLGAVVNAVIA 262
>gi|312872994|ref|ZP_07733054.1| YihY family protein [Lactobacillus iners LEAF 2062A-h1]
gi|311091516|gb|EFQ49900.1| YihY family protein [Lactobacillus iners LEAF 2062A-h1]
Length = 306
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 108/265 (40%), Gaps = 8/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE------MRSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQHSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F T Y + + + L
Sbjct: 199 NTYINYTIPNIGMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGTRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASMIIYYW 277
++L + + F++G LNA++ +
Sbjct: 259 MWLNLAAILFLIGVCLNATISYIKY 283
>gi|94990668|ref|YP_598768.1| ribonuclease BN [Streptococcus pyogenes MGAS10270]
gi|94544176|gb|ABF34224.1| Ribonuclease BN [Streptococcus pyogenes MGAS10270]
Length = 321
Score = 109 bits (272), Expect = 5e-22, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + H + A ++ +L+ FP IV AN+ +L + ++ +
Sbjct: 13 KWQYEPIQVFMRHLQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFRPTSAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++I L+ L+ L A+ + K + N+ I T
Sbjct: 131 RDFFIGHLVGLLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQPIT 190
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F+GL+ ++ LP K KI ILPG +FT + L +Y+V
Sbjct: 191 VLIIFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVDIKM 250
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L ILGA NA+ K
Sbjct: 251 FGSVMIFIIMLWFIFLARILILGAIFNATYQEMSLGK 287
>gi|298386552|ref|ZP_06996108.1| ribonuclease [Bacteroides sp. 1_1_14]
gi|298260929|gb|EFI03797.1| ribonuclease [Bacteroides sp. 1_1_14]
Length = 310
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 98/282 (34%), Gaps = 6/282 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + F II D ++ FV+++ +++ ++ + L S+ P + G
Sbjct: 8 KQKLSLAFKIIKDTVQGFVDDNVMRLSASLAYATLFSIIPLFSLLITI-GVFLQIDLTDQ 66
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + I + IS + ++ ++ SLN +
Sbjct: 67 LYTQIEPVVGPKVVEALRSIIENATEADVSSFATIISVGVTIFSATTVFAEIQSSLNTIW 126
Query: 121 RVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LII 177
+ +SW + V I+ F L ++ ++ ++
Sbjct: 127 GIKAVPRKSWLKYIKNRLLSFSVILVFAFILLITFTITNLITDLSNRYIANNPDVAESLV 186
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
I+ ++ I + LP AK K + G + T + + G + YI +
Sbjct: 187 KVIGIFVNIVVTTIIFTLIFKILPDAKIKSKDVFIGALVTTVLLLAGQWGISFYIA-IAN 245
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T+Y A + ++++Y + GAE + K
Sbjct: 246 IETVYGAAAFMAIFIIWIYYSAIIIYTGAEFTKAWANELGGK 287
>gi|222153325|ref|YP_002562502.1| ribonuclease BN-like family protein [Streptococcus uberis 0140J]
gi|222114138|emb|CAR42618.1| ribonuclease BN-like family protein [Streptococcus uberis 0140J]
Length = 315
Score = 109 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 55/277 (19%), Positives = 117/277 (42%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + HFV + + ++ +++VFP I+ AN+ +L + ++ +
Sbjct: 14 KWQYEPVQAFMRHFVSAEMDLSSIAVAYYLIITVFPLIIIAANIFPYLNID--ISDLLSL 71
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + P I KP + + + PA G+ ++ +A + S + +L+ ++N+AY V E
Sbjct: 72 MKQSLPVDIYKPAAAVVTNIFSKPAGGILGMATVAGLWTMSRSLTSLQKAVNKAYGVSEH 131
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ +I + L + + + + + N+ + T
Sbjct: 132 RDFLVSHIIGLFISVFILFLLTFVLIFSTFSKATIQLLDRHYHLSDNVTSLFLLLIQPTT 191
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ +F G++ ++ LP K + I ILPG IFT + + +Y+V
Sbjct: 192 IVIIFSGIMVLYFLLPNVKIRKIRYILPGTIFTAFVMTFMSNMIANYVVHNVERMVDIKA 251
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
SIM +++ L I GA NA+ K
Sbjct: 252 FGSIMIFIIMLWFIFLARILIFGAICNATYQELDQGK 288
>gi|284053193|ref|ZP_06383403.1| ribonuclease BN [Arthrospira platensis str. Paraca]
gi|291567154|dbj|BAI89426.1| serum resistance locus BrkB-like protein [Arthrospira platensis
NIES-39]
Length = 295
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 108/275 (39%), Gaps = 11/275 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFG 68
+ + I + ++ +A+ ++ + S+ P ++ +AG + VID +
Sbjct: 8 SLFKETITEWQKDKVPILAAALAYYMVFSLAPLLMIVIAVAGSIVGEAVAQKEVIDQLET 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM-- 125
E A I + I + + I + + ++ L+ SLN + V
Sbjct: 68 LMGEQGASVIANAIQSQFQPSSSIITTIIGVVTLLFAATTIFAQLKESLNIIWHVEVRPG 127
Query: 126 ---RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ +R++S VL+ + L+ + + ++ + G + +I NG
Sbjct: 128 QGIWEFIRSRILSIIMVLIVGLLLLSSLAISSFLSGMSDWLDEVISMPGFVRSLIDNG-- 185
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + I ++ LP K + G T I +++G + Y+ +T ++ Y
Sbjct: 186 -VSFILITILFGQIYRILPDVKIAWSDVAVGSGITAILFIIGRTFISFYLGR-ATVASAY 243
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+S + L++++ F+LGAEL Y
Sbjct: 244 GAASSFVVLLLWIFYSCQIFLLGAELTKIWSRRYG 278
>gi|83718267|ref|YP_438902.1| YihY family protein [Burkholderia thailandensis E264]
gi|83652092|gb|ABC36156.1| YihY family protein [Burkholderia thailandensis E264]
Length = 325
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/256 (18%), Positives = 92/256 (35%), Gaps = 5/256 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA F + +MA+ I+ + S+ P +V +AG F GA V V
Sbjct: 40 DAFRRFSADRCSSMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 99
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + E R+ +
Sbjct: 100 EAAAGVQTIVENAHRSGSRGGTAALISFAMLAIGASATFASLNTALSVIWPATETRASSV 159
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ + I + + L
Sbjct: 160 LGLVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVAIGNLLQFSIGIAVL 219
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 220 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 278
Query: 250 TCLVFLYMLGVFFILG 265
L++LY +LG
Sbjct: 279 VLLMWLYFSAAVLLLG 294
>gi|261819452|ref|YP_003257558.1| ribonuclease [Pectobacterium wasabiae WPP163]
gi|261603465|gb|ACX85951.1| ribonuclease [Pectobacterium wasabiae WPP163]
Length = 338
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 90/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 47 HLIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTGLINRIVN 106
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + L A Y + + LR ++ R V R+
Sbjct: 107 SISDPNLANTLKSTVNTAVQQRTTVGLTGLLIALYSGISWMGNLREAIRAQSRDVWERNP 166
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
Y F + + L+I F+ A + + L +
Sbjct: 167 KDEEKIYFQYTRDFLSLTGLVIALIITLFLTSVAGTAQNMIVTALGLDGIEWLRPALTLI 226
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++ G + + + T + ++ S
Sbjct: 227 ALSISIFANYLLFLWIFFVLPRHKPKRKALFRGTLIAAVGFEAIKFAMTVALPKLAS-SP 285
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 286 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 316
>gi|19746326|ref|NP_607462.1| hypothetical protein spyM18_1365 [Streptococcus pyogenes MGAS8232]
gi|21910564|ref|NP_664832.1| hypothetical protein SpyM3_1028 [Streptococcus pyogenes MGAS315]
gi|28895744|ref|NP_802094.1| hypothetical protein SPs0832 [Streptococcus pyogenes SSI-1]
gi|50914420|ref|YP_060392.1| ribonuclease BN [Streptococcus pyogenes MGAS10394]
gi|56808457|ref|ZP_00366201.1| COG1295: Predicted membrane protein [Streptococcus pyogenes M49
591]
gi|71903759|ref|YP_280562.1| ribonuclease BN [Streptococcus pyogenes MGAS6180]
gi|94988776|ref|YP_596877.1| ribonuclease BN [Streptococcus pyogenes MGAS9429]
gi|94992661|ref|YP_600760.1| ribonuclease BN [Streptococcus pyogenes MGAS2096]
gi|139473605|ref|YP_001128321.1| ribonuclease BN-like family protein [Streptococcus pyogenes str.
Manfredo]
gi|209559593|ref|YP_002286065.1| Ribonuclease BN [Streptococcus pyogenes NZ131]
gi|306827129|ref|ZP_07460421.1| YihY family protein [Streptococcus pyogenes ATCC 10782]
gi|19748519|gb|AAL97961.1| conserved hypothetical protein [Streptococcus pyogenes MGAS8232]
gi|21904764|gb|AAM79635.1| conserved hypothetical protein [Streptococcus pyogenes MGAS315]
gi|28810993|dbj|BAC63927.1| conserved hypothetical protein [Streptococcus pyogenes SSI-1]
gi|50903494|gb|AAT87209.1| Ribonuclease BN [Streptococcus pyogenes MGAS10394]
gi|71802854|gb|AAX72207.1| ribonuclease BN [Streptococcus pyogenes MGAS6180]
gi|94542284|gb|ABF32333.1| ribonuclease BN [Streptococcus pyogenes MGAS9429]
gi|94546169|gb|ABF36216.1| Ribonuclease BN [Streptococcus pyogenes MGAS2096]
gi|134271852|emb|CAM30087.1| ribonuclease BN-like family protein [Streptococcus pyogenes str.
Manfredo]
gi|209540794|gb|ACI61370.1| Ribonuclease BN [Streptococcus pyogenes NZ131]
gi|304430682|gb|EFM33699.1| YihY family protein [Streptococcus pyogenes ATCC 10782]
Length = 321
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + H + A ++ +L+ FP IV AN+ +L + ++ +
Sbjct: 13 KWQYEPIQVFMRHLQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++I L+ L+ L A+ + K + N+ I T
Sbjct: 131 RDFFIGHLVGLLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQPIT 190
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F+GL+ ++ LP K KI ILPG +FT + L +Y+V
Sbjct: 191 VLIIFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVDIKM 250
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L ILGA NA+ K
Sbjct: 251 FGSVMIFIIMLWFIFLARILILGAIFNATYQEMSLGK 287
>gi|229083712|ref|ZP_04216033.1| YihY [Bacillus cereus Rock3-44]
gi|228699570|gb|EEL52234.1| YihY [Bacillus cereus Rock3-44]
Length = 207
Score = 108 bits (271), Expect = 6e-22, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 91/195 (46%)
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ V+ GL + L+ +F+SNGV A+ + NRAY V E RS+ TR +S L
Sbjct: 3 VDSVVNKQNGGLLSFGLLSMLWFASNGVNAVMNAFNRAYDVKETRSYITTRALSIVLTLS 62
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
+V V V + A V K + + R+ A+ L LF F++ F P
Sbjct: 63 IIFMIVFALIVPVFGQVIGAAVFKALGLSESFSFVWSITRLVASFLVLFALFSFLYTFAP 122
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K + ++ G +F I W+V + F Y+ F+ Y+ Y GL I+ +++ Y+
Sbjct: 123 DRKLRRKEVVSGALFATIGWIVVSYSFAFYVDKFANYANTYGGLGGIIILMLWFYLTAWV 182
Query: 262 FILGAELNASMIIYY 276
+LG E+N + Y
Sbjct: 183 ILLGGEINGLLYSYR 197
>gi|300916751|ref|ZP_07133462.1| putative ribonuclease [Escherichia coli MS 115-1]
gi|300415973|gb|EFJ99283.1| putative ribonuclease [Escherichia coli MS 115-1]
Length = 337
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A ++ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWISTAEYKDDPRMP 332
>gi|57340138|gb|AAW50056.1| hypothetical protein FTT0213 [synthetic construct]
Length = 430
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 100/275 (36%), Gaps = 11/275 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ +
Sbjct: 34 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFS--SLSES 91
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 92 LQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIFY 150
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + L+ + + + + + + + + +
Sbjct: 151 ANRQRPILQSLLVYWALMTMGPLLMGFVFISSTYLISMA--------WFVKDIGMEQYLL 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ L G V+ LP + L I + + +F Y+ TYS +
Sbjct: 203 SGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSVI 262
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L+ I ++++++ +LGA + +M
Sbjct: 263 YGSLSLIPIFILWVFVTWQITLLGAVMIRAMQYMK 297
>gi|119511130|ref|ZP_01630248.1| hypothetical protein N9414_16961 [Nodularia spumigena CCY9414]
gi|119464225|gb|EAW45144.1| hypothetical protein N9414_16961 [Nodularia spumigena CCY9414]
Length = 316
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 99/278 (35%), Gaps = 6/278 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVI 63
+ ++ + + + +AS ++ ++ S+ P +V + G G VI
Sbjct: 10 LRKIRRLLTEIFSDWQLNEVPLLASSLAYYSVFSLAPLLVLLIMIVGTIFGESVVQEEVI 69
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + E AK I+ I+ + + + ++ ++ +LNR ++
Sbjct: 70 SQLSKLFGEEGAKLISTAIVNLRVDSREQTFQIVFNLGFLLFGATGVFTQIQAALNRIWK 129
Query: 122 VVEMRSWYITRL--ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
V + ++ L L+ V V++ FV+ + V + +
Sbjct: 130 VKPVPRHHVLNLLHKRVLCFLMVLVIAVVLILFFVSNAILARLVIFLNELVPGSGYLWQF 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ T + ++ LP A+ + G + T + ++VG LF ++ + +
Sbjct: 190 MSLLITFGGTTLMFTMMYSILPDAEIAWRDTIVGALITSVLFLVGQYLFGQFLSR-TNFG 248
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ Y S + + +++ LGAE
Sbjct: 249 SAYGVAGSFVIVITWIFFAAHILFLGAEFTKVYAKQRG 286
>gi|152981654|ref|YP_001355206.1| ribonuclease BN [Janthinobacterium sp. Marseille]
gi|151281731|gb|ABR90141.1| ribonuclease BN [Janthinobacterium sp. Marseille]
Length = 301
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 48/279 (17%), Positives = 112/279 (40%), Gaps = 12/279 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVF 67
+ + +A++ ++++ +M + ++ + S+ P ++ +AGF G + +I +
Sbjct: 10 WSLTKEAVQAWMQDFAPSMGAALAYYTIFSLAPMLIIVIAIAGFFFGQNTAQGEIIAQLR 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEM- 125
G + A + + V + T+ L ++ L+ +LNR ++V
Sbjct: 70 GLVGDTGAAAVEGILRSVSQPGQGIVAATLGTLTLMIGATAVFGELQSALNRIWKVTANN 129
Query: 126 -----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ TRL+SFG V+ L+I + A+ + +L I+
Sbjct: 130 NTGGVWKFVCTRLLSFGMVMGLGFMLLISMILSAALAALGKWWGSMLGDWTIVLEILNLA 189
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + ++ F+P A ++ G + T + + VG L Y+ + ++
Sbjct: 190 ---VSFGVITTLFAMIYKFMPRATIAWRNVWFGAVITALLFTVGKFLIGLYLGK-TNMAS 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ L ++Y F+LGAE + + +
Sbjct: 246 GFGAAGSLVVLLAWIYYSAQIFLLGAEFTWVLSQRHEAR 284
>gi|15675286|ref|NP_269460.1| hypothetical protein SPy_1353 [Streptococcus pyogenes M1 GAS]
gi|71910915|ref|YP_282465.1| ribonuclease BN [Streptococcus pyogenes MGAS5005]
gi|13622462|gb|AAK34181.1| conserved hypothetical protein [Streptococcus pyogenes M1 GAS]
gi|71853697|gb|AAZ51720.1| ribonuclease BN [Streptococcus pyogenes MGAS5005]
Length = 321
Score = 108 bits (271), Expect = 7e-22, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 116/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + H + A ++ +L+ FP IV AN+ +L + ++ +
Sbjct: 13 KWQYEPIQVFMRHLQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++I L+ L+ L + A+ + K + N+ I T
Sbjct: 131 RDFFIGHLVGLLTSLIILFLLAFALIFSIFSKAAIQVLDKHYHLSDNITTIFLLLIQPIT 190
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F+GL+ ++ LP K KI ILPG +FT + L +Y+V
Sbjct: 191 VLIIFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVDIKM 250
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L ILGA NA+ K
Sbjct: 251 FGSVMIFIIMLWFIFLARILILGAIFNATYQEMSLGK 287
>gi|149919656|ref|ZP_01908135.1| Ribonuclease BN [Plesiocystis pacifica SIR-1]
gi|149819599|gb|EDM79027.1| Ribonuclease BN [Plesiocystis pacifica SIR-1]
Length = 507
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 97/268 (36%), Gaps = 27/268 (10%)
Query: 6 CIVFDIIYDAIEHFV-EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
++ +I + ++ + ++AS ++L L S+ P + F T ++
Sbjct: 33 RRIWLLITYTLRRWLVTDRSPSLASSLTLQTLFSIVPAAGVILFFMSKI-DPTFGSTFVE 91
Query: 65 VVFGAWPEVI---AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A ++ + AV + L + L + L ++N +R
Sbjct: 92 LAATALGPDSTQASEIGDTVVRLAEAVNLQELGSWGLLVIVVLAYMAFSTLENTVNDIWR 151
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + R+ + + L + + V + +
Sbjct: 152 ISKSRTIVAKFTMFYTLATLGPIIIFYSLAQPVLAQV--------------------SAW 191
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV--TFSTYS 239
+ ++ IGLI ++ FLP + + + G + + + G + F Y+ STY
Sbjct: 192 VVTPVVTTSIGLILLNRFLPNVNVRWRAAVIGGLLSAALFEFGKIAFGQYLSLVAISTYR 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAE 267
+Y LA + +V+ Y+ + +LGAE
Sbjct: 252 GLYGSLAILPVFIVWAYVSWMIVLLGAE 279
>gi|310766003|gb|ADP10953.1| Ribonuclease BN [Erwinia sp. Ejp617]
Length = 343
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 93/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A E F + G + I+ + LS+ P ++ GF+ + +I + G
Sbjct: 52 HFLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQGLLTELIGKIVG 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + L A Y + + LR ++ R V R
Sbjct: 112 NISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERAP 171
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+ F ++ + L+I + A A + + + L ++
Sbjct: 172 QDQEKIWFKYSRDFISLIGLVLALIITLSLTSIAGAAQASIVRALGLENIEWLRPVMTLI 231
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 232 ALSISIFANYLLFLWIFWILPRHKPRKRALFRGTLLAAIGFEAIKFIMTLTLPKLAS-SP 290
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 291 SGAAFGSVLGLMAFFYFFARLILFCAAWIATAQYQNDPENP 331
>gi|38233243|ref|NP_939010.1| hypothetical protein DIP0636 [Corynebacterium diphtheriae NCTC
13129]
gi|38199502|emb|CAE49153.1| Putative membrane protein [Corynebacterium diphtheriae]
Length = 386
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 100/278 (35%), Gaps = 8/278 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVP 60
FD + E + +E G ++ I+ ++LS+FP ++ A + + +
Sbjct: 60 RLKWGWFDHLMRMNERYSQEGGNQYSAGITYFSVLSMFPILMLVMAAAATILARQPETLQ 119
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + IA + + + ++ +F I L A + + + LR ++ +
Sbjct: 120 QLQERITDSVDASIADTLKEILDTAIS-QRGAMFGIGGLTALWSGLSWMSHLRYGASKMW 178
Query: 121 RVVEMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL---LLI 176
R ++ T+ F L V + I + L L ++ L+
Sbjct: 179 RYPVTGDNFAKTKFQDFLGFLSLLVAMGIALGITAIGSSGLTTQLIDAIGLADVPGIFLL 238
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + ++A F +++ +LP + S L + + + L + +
Sbjct: 239 TFVISLVVGLIANFCVFLWLIKYLPRGEVPAKSALKAAGIGAVLFEIFKQLASQFFSNAL 298
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ + A I+ +V LY + + A+
Sbjct: 299 S-NPAGATFGPIIGLMVLLYFVWRILMYCCAWAATTAE 335
>gi|297199350|ref|ZP_06916747.1| ribonuclease BN [Streptomyces sviceus ATCC 29083]
gi|197715317|gb|EDY59351.1| ribonuclease BN [Streptomyces sviceus ATCC 29083]
Length = 321
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 39/274 (14%), Positives = 80/274 (29%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG+ A ++ +L + P V LA + + +
Sbjct: 33 LRLLTDSFARFRYADGFTNARALAFQVVLGLVPCTVALVGLATSVHTEGVGRIIELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + + A ++ + + NR Y +
Sbjct: 93 IVPGASADIVKDAFDGTRRTAHGSVWSTLALWLGLGFALLNLASAMGQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + + A + LV+ V VA V + G +
Sbjct: 153 RDRPFPRKYARGIVLAVAAGLPLVLGFVVLVAGEAVGDAVARSAGREGGGPRWWGVLDLP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ + + P + G + WV L Y+ + +Y
Sbjct: 213 VGLALAWVASAVIFRWSPRRVQPGYTWLAFGSAVHLLLWVSATWLLALYVEESGAFGAVY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + V LG A +
Sbjct: 273 GPLTAFIALLLWANLTAVALFLGIAFAAQLEAAR 306
>gi|120435458|ref|YP_861144.1| ribonuclease BN [Gramella forsetii KT0803]
gi|117577608|emb|CAL66077.1| ribonuclease BN [Gramella forsetii KT0803]
Length = 307
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 114/271 (42%), Gaps = 2/271 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVV 66
++++ V AS I+ S +++FPF++F NL ++ F + +
Sbjct: 35 LYNLWIIYWGGIVRGTFSTRASSIAFSFFMAIFPFLLFVLNLIPYITFIDDFQIEFLLFM 94
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + + + P GL +++ + + + +NG+ A+ +Y R
Sbjct: 95 DTLLPPETSDFFGNIFEDIASTPRGGLLSVAFILSIFLMTNGINAIFTGFEFSYHTKTNR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S ++ G L+ ++ L+I V I A+ + + + +
Sbjct: 155 SIPRQYAVAVGVSLILALLLLISVVGAVYITYAIDDLSN-LGLVNADGVGARLINYIGFV 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ ++ + ++ F + G +FT I ++ VLF+ YI FS Y+ +Y +
Sbjct: 214 ILIYTAVAILYYFGTREARQAKFFSVGALFTTILIMITTVLFSIYITNFSNYNELYGSIG 273
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+++ + ++++ +LG ELNAS+I
Sbjct: 274 ALLILMFYIWLNSNMLLLGFELNASLIKLKK 304
>gi|328885970|emb|CCA59209.1| putative integral membrane protein [Streptomyces venezuelae ATCC
10712]
Length = 374
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 103/277 (37%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+V+ ++ D + +E +A+ + LLS+ P ++ + G+ TV +
Sbjct: 33 KMVWLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGLIAVLGYADDWTNTDTVASI 92
Query: 66 VFGAWPE--------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + + + L ++ A + S V ++
Sbjct: 93 RENILHAAGTVLSDRGVREIAEPLLDDITQGKRPDLISLGFAIALWSGSRAVNVFIDTIT 152
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++ ++A + I+ + V P + + ++
Sbjct: 153 VMYGLDGHRGIVKTRLLALLLYIVALLIGAIVLPLAVVGP------DRVVELVPWGTEVV 206
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
A +L L ++ +S + +PG + WV+G+ L Y+ +
Sbjct: 207 SVLYWPAVILLSIAFLTTLYHVSVPVRSPWIEDIPGALVALGMWVLGSFLLRIYLTSQVE 266
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 267 GPTIYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 303
>gi|210616176|ref|ZP_03290977.1| hypothetical protein CLONEX_03196 [Clostridium nexile DSM 1787]
gi|210149905|gb|EEA80914.1| hypothetical protein CLONEX_03196 [Clostridium nexile DSM 1787]
Length = 273
Score = 108 bits (270), Expect = 8e-22, Method: Composition-based stats.
Identities = 58/270 (21%), Positives = 118/270 (43%), Gaps = 3/270 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + +E + A A+ + +LS+ P I+ L + + V+
Sbjct: 2 RVLVKKVNEFLEKVGRDHVGAYAAQSAFFLVLSLIPIILLLLTLVRYTPVTKA--DVMTA 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V+ +P+ I + + +V + ++AL + + GV A+ LN + +E
Sbjct: 60 VYEVFPKTIRATMISIVNEVYNQSR-AVIPLTALMTMWSAGRGVLAITNGLNCIHEEIET 118
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++ R+ + Y +L + +V+ + +V + P + I R T
Sbjct: 119 RNYIFLRIRAAFYTVLFIIAIVLSLVLLGFGNSISMFVNEHVPIFRYVTDFIIEIRTVTT 178
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L L + ++ FLP K KI PG +FT W + + +F+ Y+ F +S MY L
Sbjct: 179 LLVLIVFSTCIYRFLPNHKGKIKYQFPGAVFTAFGWTLASFIFSVYMDIFKGFSNMYGSL 238
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+I+ +++LY +LG E+N + +
Sbjct: 239 TTIVLIMLWLYFCMYVMLLGGEINVLVEEH 268
>gi|116623093|ref|YP_825249.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116226255|gb|ABJ84964.1| putative ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 379
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 98/277 (35%), Gaps = 6/277 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVID 64
D++ + + D AM + ++ +L+S+ P ++ + GA +++
Sbjct: 42 KRHLDLLKETYRQWSSHDAPAMGAAVAFYSLVSLAPLVILLVGICALVFGAAGAQAQLLE 101
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVV 123
G + A+ I + L + +S LR +LN+ +
Sbjct: 102 QFRGMVGDEGARAIRTVLTSAQKPATGVLASLFGLITLLLGASGVFIELRAALNKLWDAE 161
Query: 124 EMR--SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW-NG 180
S + + + + + + V +AI L + KFF +LG L ++W
Sbjct: 162 SGSIASGIWSFIKDRFLSIGMVLAIGFLLLVSLAISAGLGALGKFFGSLGFLPPVVWEAV 221
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ + + F+P + I G + T + + +G Y+ + +
Sbjct: 222 NFVVSLGVVAGLFALILRFVPNIRLPWHDIGLGAVLTAVLFTIGKTAIGIYLGK-AGVGS 280
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S++ +V++Y F GA +
Sbjct: 281 AYGAAGSLVLIIVWVYYSAQIFFFGAMFTRVYAQAHG 317
>gi|94994597|ref|YP_602695.1| ribonuclease BN [Streptococcus pyogenes MGAS10750]
gi|94548105|gb|ABF38151.1| Ribonuclease BN [Streptococcus pyogenes MGAS10750]
Length = 321
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 115/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ I + H + A ++ +L+ FP IV AN+ +L + ++ +
Sbjct: 13 KWQYEPIQVFMRHLQSAEMDLSAIAVAYYLILTAFPLIVIAANIFPYLNID--IADLLRL 70
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P+ I +P + + + + P+ + ++ L + S + +L+ ++N+AY +
Sbjct: 71 MKQNLPKDIFRPASAIVENIFSKPSGSVLGVATLTGLWTMSRSLTSLQKAINKAYGASQH 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++I L+ L+ L A+ + K + N+ I T
Sbjct: 131 RDFFIGHLVGLLTSLIILFLLAFALIFSTFSKAAIQVLDKHYHLSDNITTIFLLLIQPIT 190
Query: 186 MLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L +F+GL+ ++ LP K KI ILPG +FT + L +Y+V
Sbjct: 191 VLIIFVGLMLLYFLLPNVKIKKIRYILPGTLFTSFVMTFLSNLVGNYVVYNVERMVDIKM 250
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S+M +++ L ILGA NA+ K
Sbjct: 251 FGSVMIFIIMLWFIFLARILILGAIFNATYQEMSLGK 287
>gi|116629359|ref|YP_814531.1| ribonuclease BN-like family protein [Lactobacillus gasseri ATCC
33323]
gi|238853046|ref|ZP_04643439.1| YihY family protein [Lactobacillus gasseri 202-4]
gi|311110986|ref|ZP_07712383.1| putative membrane protein [Lactobacillus gasseri MV-22]
gi|116094941|gb|ABJ60093.1| Ribonuclease BN-like family enzyme [Lactobacillus gasseri ATCC
33323]
gi|238834344|gb|EEQ26588.1| YihY family protein [Lactobacillus gasseri 202-4]
gi|311066140|gb|EFQ46480.1| putative membrane protein [Lactobacillus gasseri MV-22]
Length = 307
Score = 108 bits (270), Expect = 9e-22, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 107/279 (38%), Gaps = 8/279 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + ++ + + + I+ LLS+FP I+ N+ + +
Sbjct: 11 RITEFFQLLSKYISQGEINQTSIIIAYYVLLSIFPIIIIIGNVLPLFSID--TKPIARYL 68
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+P ++ I I +L + G ++ + A + S V ++R++ N+ Y V +
Sbjct: 69 ELIFPSQVSSLIMPIINALLKKHSSGFISLGIVIAIWSLSCLVNSVRLAANKIYGVDKKE 128
Query: 127 SWYITR------LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+F ++ I+ FVF + ++ F + + N
Sbjct: 129 KGKSWWNYLLARTFTFALSVILVAGFSIIIFVFTFGRQIMEFLAPIFNLSLWWVYKLENY 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R +L I ++++ +P + + PGV FT SW + F Y+ F T
Sbjct: 189 RWPIIILMTVIINLYINYVIPNISVQKRVVWPGVCFTVASWGALSYFFGLYLRQFGTRWQ 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + S + +++L + +LG +NA+ RK
Sbjct: 249 NYGIVGSFIIFMLWLNIGSFLLLLGICINATGDELKDRK 287
>gi|329116369|ref|ZP_08245086.1| YihY family protein [Streptococcus parauberis NCFD 2020]
gi|326906774|gb|EGE53688.1| YihY family protein [Streptococcus parauberis NCFD 2020]
Length = 310
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/271 (19%), Positives = 109/271 (40%), Gaps = 5/271 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + HF + + ++ +L+VFP IV AN+ +L + ++ ++ + P
Sbjct: 19 IKAFLRHFQSAEMDLSSIAVAYYLILTVFPLIVIAANIFPYLNID--IRDLLQLMKQSLP 76
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + ++ + + PA G+ ++ + S + +L+ ++N+AY R + +
Sbjct: 77 NDIYQSARSVVINIFSKPAGGVLGVATFTGLWTMSKSLTSLQRAINKAYDASPHRDFLLG 136
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L+ + L + A+ + + L + T++ + +
Sbjct: 137 HLVGLLASIFILFLLAFVLIFSTFSKAAIQVMDNHYHLSDGLTSLFLTLIQPVTIIIILL 196
Query: 192 GLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
GL+ ++ LP + KI I+PG +FT + L HY+V S+M
Sbjct: 197 GLMALYFLLPNIRIKKIRYIMPGALFTGFVMTFLSNLIGHYVVVNVEKMVDIKTFGSVMI 256
Query: 251 C--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L ILGA NA+ K
Sbjct: 257 FIIMLWFIFLARILILGAIFNATYQEIDQGK 287
>gi|260575792|ref|ZP_05843788.1| ribonuclease BN [Rhodobacter sp. SW2]
gi|259021945|gb|EEW25245.1| ribonuclease BN [Rhodobacter sp. SW2]
Length = 277
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/282 (17%), Positives = 112/282 (39%), Gaps = 9/282 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR ++ +++ ++ A+ ++FP + + + +
Sbjct: 1 MRRRAKHAGSFLWSVWLRMENSHFGLISAGVAFYAMFALFPGLTATIAIWSLVSDPSVIS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLN 117
+ + V P A + D+I ++ P L + L A Y + G+ AL L+
Sbjct: 61 SYVKVADEFLPHDAAVLVHDQITALITTPKVHLGWATLLSLGIAVYSARAGISALIQGLD 120
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ R+ L + + +++L+ V +A + + V F ++
Sbjct: 121 VVH-----RATPRGLLQGWWVEFVMTMSLITTVLVALATVVIVPLVLNFVTLGVLEGWML 175
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
A +L L LI ++ F P + ++ ++PG + W + ++ + Y+ F+
Sbjct: 176 LALPWGAMVLLLMSCLIILYRFGPNTPQRRVHRVIPGAFLAALVWAMVSIALSAYLANFN 235
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y+ +Y + +++ L +LY+ +LGA +NA +
Sbjct: 236 SYNRIYGSIGAVIALLSWLYLSVWSVLLGAAVNAEIPYSRPH 277
>gi|307545141|ref|YP_003897620.1| tRNA-processing ribonuclease BN [Halomonas elongata DSM 2581]
gi|307217165|emb|CBV42435.1| K07058 [Halomonas elongata DSM 2581]
Length = 360
Score = 108 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 105/273 (38%), Gaps = 6/273 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
R++ + ++ DA++ ++E + ++ A ++ L S+ P ++ + G + G
Sbjct: 14 RDFVLFWWTVVRDAVKLWLERNAFSYAGSLAFYTLFSLAPTVIIAVTVIGLVLGEDAAQG 73
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRA 119
++ + G A+ + + + Q + + + A ++ ++ SLN
Sbjct: 74 QIVAQLEGTMGASAAELVQNAVAQSRIQESGLMPTLLGLGALVVGATTVFGQMQFSLNTL 133
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP---LALAYVRKFFPALGNLLLI 176
+ V S + L +V L I + V++ + A ++ L + +
Sbjct: 134 WGVTARPSSNSLWIFIKNRTLSLTVVLSIGFILLVSLALGVMVKAMLKAADGLLPFVGFL 193
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
++ + + LP + +L G + T + + VG + Y+ +
Sbjct: 194 TNGAEFLVSLALVSALFATIFKVLPDVVLRWRDVLVGAVVTALLFAVGRTAISVYLAYTA 253
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
T S Y S++ L+++Y + + GA
Sbjct: 254 TASA-YGAAGSVVVVLLWVYYSSLILLFGAAFT 285
>gi|253564998|ref|ZP_04842454.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|251946463|gb|EES86840.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
Length = 311
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 107/284 (37%), Gaps = 10/284 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D + F+++ +++ ++ + L S+ PF+ + F
Sbjct: 10 RLSLSLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTVDVFFHMD-LANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + I P++ +S + + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTDPSRSAAFVSLGISIFGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + R++SF +L+ + L+I + I +P + +
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEVAD--S 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ I M I + LP AK K + G + T I ++G + YI
Sbjct: 187 LVKVVGIIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTILLLIGQWGISFYIG-I 245
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ T+Y A ++ + ++Y + GAE + K
Sbjct: 246 ANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEFTKAWANEMGSK 289
>gi|153947665|ref|YP_001403000.1| ribonuclease BN-like family protein [Yersinia pseudotuberculosis IP
31758]
gi|152959160|gb|ABS46621.1| ribonuclease BN-like family protein [Yersinia pseudotuberculosis IP
31758]
Length = 361
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 94/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 50 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFATVGFVLASNPDLLAELINKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + A Y + + LR ++ R V R+
Sbjct: 110 SISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNP 169
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F ++ V L++ + A A + + L +
Sbjct: 170 QDKEKFYYRYARDFISLIGLVVALIVTLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLI 229
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 230 ALSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SP 288
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 289 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 319
>gi|304399046|ref|ZP_07380915.1| ribonuclease BN [Pantoea sp. aB]
gi|304353506|gb|EFM17884.1| ribonuclease BN [Pantoea sp. aB]
Length = 262
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 33/253 (13%), Positives = 82/253 (32%), Gaps = 6/253 (2%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
A +++ +LL++ P I L + + A L
Sbjct: 1 MTTQAGNLAYVSLLALVPLIAVVFALFAAFPVFSDISVQLKQFVFNNLMPAAGNTLQRYL 60
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ + + A+ + + ++ +LN +R + R + + + + L
Sbjct: 61 EQFVANVNRMTAVGAVGLIVTALLLMHSVDTALNTIWRSNKKRPMVYSFAVYWMILTLGP 120
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ + + + + ++ +L + ++ +P
Sbjct: 121 LLAGASLAISSYLLSL------RWINATGVTSLVDQMLRIFPLLLSWFAFWLLYSIVPTQ 174
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ L G + + +G F Y+ F +Y +Y LA I +++Y +
Sbjct: 175 RVPPRDALIGALVAGALFELGKKGFALYVTMFPSYQLIYGVLAVIPILFLWVYWTWCIVL 234
Query: 264 LGAELNASMIIYY 276
LGAE+ ++ Y
Sbjct: 235 LGAEITVALADYR 247
>gi|159902649|ref|YP_001549993.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9211]
gi|159887825|gb|ABX08039.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9211]
Length = 313
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/298 (9%), Positives = 95/298 (31%), Gaps = 21/298 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
+ ++ A + +++ + L S FP ++ ++A +
Sbjct: 6 KSQLRWFLRSLWQASRRWNRCHCVDLSAAFAYYTLQSFFPILLISLSVASWFLGKQQGLD 65
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + P + + +++++ G + A+ + N L+ +R
Sbjct: 66 QQIIGLAAQVLPPSVVGLVDTTLVKLV-NQRFGAGILGAMFLVITAGNAYLTLQRGSDRL 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---- 175
+ T + + + + + V + L + + + +
Sbjct: 125 WEDALPTKPDETPFRMQAFRFIRNRIEAFLVVLLVGFLMVLDEISAYVRLIPGAVWTDLK 184
Query: 176 --------------IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+I G+I + + + +P K + ++PG I +
Sbjct: 185 NNSPEIANTLSKIPVIEVGQIIIPFIGFSVMAFLLQYLVPPRKVPMRPLIPGSIMIGVLL 244
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + I++ + Y ++ ++ ++++++G+ G + + K
Sbjct: 245 TILNSAVSRTILSLGSRFQAYGIISGVLVLTLWIWIVGLILYFGQCWSVVLATNQMNK 302
>gi|116694816|ref|YP_729027.1| ribonuclease BN [Ralstonia eutropha H16]
gi|113529315|emb|CAJ95662.1| Ribonuclease BN [Ralstonia eutropha H16]
Length = 303
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 102/283 (36%), Gaps = 4/283 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + + F G +A ++ ALLS+ P ++ + + +
Sbjct: 12 RDLLRHPGRFAWHTLRQFRANQGLLLAGAVAYYALLSIVPLLILMIIALSHVIEPDLLLS 71
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + E+ L + + + +FSS L +++ +
Sbjct: 72 TLARYLEWVVPGQSRALITELAAFLRN-RGTIGWVLLVTMLFFSSLAFTVLENAMSVIFE 130
Query: 122 VV---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
R + ++ L+ + Y+ + SV L++++ V + + +L +
Sbjct: 131 HRVAIRRRHFLVSALLPYCYIAVLSVGLLLVTVVSGGLLAIGERHVEVLGRDWSLDRLST 190
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + L +++ +P + + L G + + W + + Y T S
Sbjct: 191 GLLYLLGFIGEVLMLTSIYMVMPVGRLSLRHALSGALVAAVLWEISRHVLAWYFTTLSQV 250
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S +Y L + + L+ L + + GA++ A W +P
Sbjct: 251 SRVYGSLTTAIVVLLSLEIAATLLLFGAQVIAEFERGGWEGRP 293
>gi|319792619|ref|YP_004154259.1| ribonuclease bn [Variovorax paradoxus EPS]
gi|315595082|gb|ADU36148.1| ribonuclease BN [Variovorax paradoxus EPS]
Length = 317
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 98/276 (35%), Gaps = 4/276 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+DA++ F G +A ++ ALLS+ P ++ + +
Sbjct: 12 PLLRHPLRFFWDALKAFRANQGLLLAGAVAYYALLSIVPLLIVSVIAMSHVIEQAELLRT 71
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I +K I E+ L + + + +FSS L ++ +
Sbjct: 72 IGRYLEWLLPGQSKAIVTELSSFLD-HRDVMGPVLLVTMIFFSSLAFSILESAMAVIFHH 130
Query: 123 V---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R + ++ + + Y+L V L++++ V A+ L F +L +
Sbjct: 131 RKADHKRHFLVSVAMPYIYILCLCVGLLLVTLVSGALQLVGQESVDLFGREWSLSGVSGL 190
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L ++L +PA + + L G + + W + Y T S +
Sbjct: 191 LLYLLGLGGEIFMLTSLYLVMPAGRMSLRHALLGGVTAALLWEATRRVLIWYFSTLSQVN 250
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+Y L + + L+ L + +LGA++ A
Sbjct: 251 VVYGSLTTAIVVLLSLEIAATLVLLGAQVIAQYERL 286
>gi|313890733|ref|ZP_07824358.1| YihY family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|313120834|gb|EFR43948.1| YihY family protein [Streptococcus pseudoporcinus SPIN 20026]
Length = 319
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/277 (19%), Positives = 116/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + ++HF + + ++ +L+VFP I+ AN+ +L + ++++
Sbjct: 14 KWQYEPVQAFMKHFASAEMDLSSIAVAYYLILTVFPLIIIAANIFPYLNID--ISDLLNL 71
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + P I KP + + + PA + ++ LA + S + +L+ ++N+AY +
Sbjct: 72 MKQSLPVDIYKPAASIVTNIFSKPAGSILGMATLAGLWTMSRSLTSLQKAINKAYGASQH 131
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ +I + L + A+ + K + N+ + T
Sbjct: 132 RDFLVSHIIGLLISVFILFLLTFVLIFSTFSKAAIQVIDKHYHLSDNITSLFLLLIQPIT 191
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ +FIG++ ++ LP K + I ILPG T + + +Y+V
Sbjct: 192 IVIIFIGIMVLYFLLPNVKIRKIRYILPGTFLTAFVMTFMSNMLANYVVHSVERMVDIKM 251
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
SIM +++ L I GA NA+ K
Sbjct: 252 FGSIMIFIIMLWFIFLARILIFGAICNATYQELDQGK 288
>gi|227486426|ref|ZP_03916742.1| ribonuclease [Anaerococcus lactolyticus ATCC 51172]
gi|227235607|gb|EEI85622.1| ribonuclease [Anaerococcus lactolyticus ATCC 51172]
Length = 325
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/295 (18%), Positives = 112/295 (37%), Gaps = 20/295 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ D I + I +D AS +S L + P ++ ++A
Sbjct: 1 MKIKKHKFKDFIKNFINRLKTQDIMTYASALSFYFLQASIPLMMVLVSVASTFLKGN--E 58
Query: 61 TVIDVVFGAWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I +P+ A+ I + + + + T++ L A + +++GV+ L +++N A
Sbjct: 59 KIIYEFLNLFPKTTARLIIKALDIMFASSQSTAVTTVTILFALWSATSGVDKLIMAINHA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP----------- 168
Y + RL+S Y ++ ++ + + P + +
Sbjct: 119 YGLGHQAKAIKQRLMSIIYTIIFIAFIMFLLIFQIYGPTIINILDSKILTITGKFFGDNL 178
Query: 169 ---ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP---AAKSKIMSILPGVIFTWISWV 222
I I +L + L ++ + P A + L G I +
Sbjct: 179 ESIIDFISSPIFTILTIAIPLLIMSAALGILYKYAPGNSANRIPFKQALTGGILATGTIY 238
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
V + ++++I FS S +Y LA I+ ++L ++ I+GAEL A+ Y
Sbjct: 239 VASFAYSYFINNFSNKSLIYGALAGILALFIWLLIVSSLLIIGAELIAAFREGYR 293
>gi|213965745|ref|ZP_03393938.1| tRNA-processing ribonuclease BN [Corynebacterium amycolatum SK46]
gi|213951696|gb|EEB63085.1| tRNA-processing ribonuclease BN [Corynebacterium amycolatum SK46]
Length = 365
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 103/285 (36%), Gaps = 18/285 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVFG 68
+ A F E G+ A+ ++ +L+ P ++ ++A + A D +
Sbjct: 40 LKRAGIEFFLELGFDAAAKLTYYTVLTFAPALLAIYSIATLMLAGYTEDLNRLTEDFIRS 99
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P A+PI + I ++ GL TI + A SS A + N Y V E R
Sbjct: 100 YIPAEYAEPIRNVISTIIGSATGGLVALTIGIVLALISSSAYTRAFSRTGNSIYGVSEGR 159
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-----------LL 175
+ L+ LL + V++ + + + + + +
Sbjct: 160 TLIRYHLLMVAITLLLLIGTVVLLIAIIVNDQLVNTIVEPVARPLGIESTTRQVIDFCIS 219
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ R ++ I + ++ F P + K + G IS +V Y+
Sbjct: 220 VWSWLRWPVIIVMSMILIGSLYYFTPNVRMRKFRWLSTGSALAIISSLVIGKALQLYLFN 279
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
F+ + Y + +++ + L+ + V + G +L+A + +
Sbjct: 280 FAASNP-YGAMGAVIALMTALWGINVVVVFGFKLDAEIERMRQLR 323
>gi|333023545|ref|ZP_08451609.1| putative ribonuclease BN [Streptomyces sp. Tu6071]
gi|332743397|gb|EGJ73838.1| putative ribonuclease BN [Streptomyces sp. Tu6071]
Length = 317
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 89/274 (32%), Gaps = 4/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG+ A ++L +L+V P ++ L+ L +
Sbjct: 33 WQLVRDSFVRFRYADGFTNARALALQTVLAVIPLVIAFVGLSTSLHTEDLGRLAQLTIHS 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + G A+ + + + + NR Y
Sbjct: 93 VAAGPSTEVVDEALERGEYAAGDGDEIALWFGAIFSLVNVTTAMCQIERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +++ L A + L + V +A + + + R
Sbjct: 153 RPFHLKYGRGLVMALTAGIPLGLGFVVMIAGGDLAGAATTVYGLGDHARTVWEYARWPVG 212
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L I V P K + G W + L + Y+ ++ T+Y
Sbjct: 213 LLLALIAASVVFRSAPRRKQPGYTWLAFGAGVYLSLWTLLTWLLSLYLRLSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++ M+ L++ Y+ V LG A +
Sbjct: 273 LSAFMSLLLWAYLTSVALFLGLSFAAQLEASRAH 306
>gi|55821532|ref|YP_139974.1| tRNA-processing ribonuclease BN [Streptococcus thermophilus LMG
18311]
gi|55737517|gb|AAV61159.1| tRNA-processing ribonuclease BN,putative [Streptococcus
thermophilus LMG 18311]
Length = 321
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 114/276 (41%), Gaps = 7/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + H+ + + ++ +L+VFP IV AN+ +L ++ +
Sbjct: 16 WRPFQVYLSHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNIDTT--DLLKFMNE 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ P + + + + P+ L +++L + + +L+ ++++ Y E R
Sbjct: 74 HLPKHFYAPAANVVQDIFSTPSGRLLGVASLTGFWTMIKSLSSLQKAIDKVYGASEHRDV 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I+ +I L+ L + I L + + +P NL +I N ++
Sbjct: 134 FISHIIGGLLSLVILFLLTFALMLSTIIQSVLRVINQTYPIGSNLTQLILNSIQPLSVAV 193
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G++ ++ LP K + I I+PG IFT + + LF Y++ + S
Sbjct: 194 VFLGMMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIHTLSRLIDIKLFGS 253
Query: 248 IM----TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L I GA NA+ +
Sbjct: 254 IMIFIFIFMLWFIFLARILIFGAVFNATYQELKQGE 289
>gi|313207383|ref|YP_004046560.1| ribonuclease bn [Riemerella anatipestifer DSM 15868]
gi|312446699|gb|ADQ83054.1| ribonuclease BN [Riemerella anatipestifer DSM 15868]
gi|315023278|gb|EFT36288.1| Ribonuclease BN [Riemerella anatipestifer RA-YM]
gi|325335161|gb|ADZ11435.1| ribonuclease BN [Riemerella anatipestifer RA-GD]
Length = 301
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 52/276 (18%), Positives = 111/276 (40%), Gaps = 4/276 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++ + + + + A+ IS S LS+FPF++F ++ ++ + + I VF
Sbjct: 28 LWKMFEIYGQGVFKNNVVKQAASISWSFFLSIFPFLLFLLSILPYMPHYDKLQFYIFEVF 87
Query: 68 --GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + +T+ I + K + ++ L A F++NG +L N
Sbjct: 88 MANILPTHMLHDVTEYIQNSIIPNMKSISKLTILFALVFATNGTFSLINGFNENTD--SK 145
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++ IS L + + F + L + ++ + +
Sbjct: 146 RTFIREYTISILVTLAFVTLIFLSLFGIYYSEVVLKLFTPKYNLNWLIVNLSKIIGFISF 205
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L FI L + + +S +PG + T + +V+ F Y F+ Y+ +Y +
Sbjct: 206 PLFYFILLSLFYWVGCVKVKRWLSAVPGAVLTTLLFVLITYGFIFYATNFARYNVLYGSI 265
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+I+ ++++ + + +LG ELN ++ K P
Sbjct: 266 GTIILAMIWVNLNIILILLGNELNLAIDRVKRNKLP 301
>gi|33866717|ref|NP_898276.1| serum resistance locus BrkB [Synechococcus sp. WH 8102]
gi|33633495|emb|CAE08700.1| similar to serum resistance locus BrkB [Synechococcus sp. WH 8102]
Length = 309
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 100/295 (33%), Gaps = 20/295 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A + +V + +++ + L S+FP ++ ++ +G +
Sbjct: 4 RARIRWIVVSLWRAGQRWVSHECVDLSAAFAYFTLQSIFPLLLIALSVFANVIGKADSLD 63
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + P + + ++ + +SN L+ +R +
Sbjct: 64 YLFSSLSPVLPPSALDLVETTLRGLVDQGFGA-GLFGVVVLLVTASNAFLTLQRGADRLW 122
Query: 121 RVVEMR------------SWYITRLISFGYVLLASVTLVIMSFVFVA------IPLALAY 162
+ +RL +F VLL + L++ V + L
Sbjct: 123 EEWMPSPTQSQSFSFQAIQFIRSRLEAFMIVLLLASLLLVEQVVVGFRQLPDELLATLQQ 182
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ + G+I L L + + + LP+ + + ++PG + S
Sbjct: 183 FAPELSLVLRTGPVTRLGQILVPTLFLSLLALLLQRVLPSRRVPLRPLIPGSLLIGFSLT 242
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ + + I++ Y + ++ ++++++G+ G + + +
Sbjct: 243 ILNSVLSLSIISLGNRYQAYGVIGGVLVLTLWVWLVGLILYFGQCWSVELSLRLR 297
>gi|200386637|ref|ZP_03213249.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|199603735|gb|EDZ02280.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
Length = 342
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|332523215|ref|ZP_08399467.1| YihY family protein [Streptococcus porcinus str. Jelinkova 176]
gi|332314479|gb|EGJ27464.1| YihY family protein [Streptococcus porcinus str. Jelinkova 176]
Length = 319
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/277 (19%), Positives = 116/277 (41%), Gaps = 5/277 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + ++HF + + ++ +L+VFP I+ AN+ +L + ++++
Sbjct: 14 KWQYEPVQAFMKHFASAEMDLSSIAVAYYLILTVFPLIIIAANIFPYLNID--ISDLLNL 71
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + P I KP + + + PA + ++ +A + S + +L+ ++N+AY +
Sbjct: 72 MKQSLPVDIYKPAASIVTNIFSKPAGSILGMATVAGLWTMSRSLTSLQKAINKAYGASQH 131
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ +I + L + A+ + K + N+ + T
Sbjct: 132 RDFLVSHIIGLLISVFILFLLTFVLIFSTFSKAAIQVIDKHYHLSDNITSLFLLLIQPIT 191
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ +FIG++ ++ LP K + I ILPG T + + +Y+V
Sbjct: 192 IVIIFIGIMVLYFLLPNVKIRKIRYILPGTFLTAFVMTFMSNMLANYVVHSVERMVDIKM 251
Query: 245 LASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
SIM +++ L I GA NA+ K
Sbjct: 252 FGSIMIFIIMLWFIFLARILIFGAICNATYQELDQGK 288
>gi|265766043|ref|ZP_06094084.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|263253711|gb|EEZ25176.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
Length = 311
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 105/284 (36%), Gaps = 10/284 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D + F+++ +++ ++ + L S+ PF+ + G
Sbjct: 10 RLSLSLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTV-GVFFHMDLANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + I ++ +S + + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTDSSRSAAFVSLGISIFGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + R++SF +L+ + L+I + I +P + +
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEVAD--S 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ I M I + LP AK K + G + T ++G + YI
Sbjct: 187 LVKVVGIIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTTLLLIGQWGISFYIG-I 245
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ T+Y A ++ + ++Y + GAE + K
Sbjct: 246 ANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEFTKAWANEMGGK 289
>gi|168235207|ref|ZP_02660265.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194736490|ref|YP_002116545.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|204928761|ref|ZP_03219960.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|194711992|gb|ACF91213.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197291393|gb|EDY30745.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|204322194|gb|EDZ07392.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 342
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|300214900|gb|ADJ79316.1| Ribonuclease BN [Lactobacillus salivarius CECT 5713]
Length = 294
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E D+ +E E D + + I+ ALL++ P I+ N+ + +
Sbjct: 3 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKEA-- 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ + P + + I +L + G+ ++S + A + S G+ AL+ LN AY
Sbjct: 61 DILNGLQVIVPSNVFTTLKPIIETMLKKGSGGIASVSGILALWAVSRGINALKNGLNMAY 120
Query: 121 RVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 121 GVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLFM 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 181 RWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTRT 240
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + L++L G +LG+ +NA + Y++ +
Sbjct: 241 LLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYFFGE 281
>gi|90962240|ref|YP_536156.1| ribonuclease BN [Lactobacillus salivarius UCC118]
gi|227892347|ref|ZP_04010152.1| ribonuclease BN [Lactobacillus salivarius ATCC 11741]
gi|90821434|gb|ABE00073.1| Ribonuclease BN [Lactobacillus salivarius UCC118]
gi|227865896|gb|EEJ73317.1| ribonuclease BN [Lactobacillus salivarius ATCC 11741]
Length = 294
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 61/281 (21%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E D+ +E E D + + I+ ALL++ P I+ N+ + +
Sbjct: 3 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKEA-- 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V++ + P + + I +L + G+ ++S + A + S G+ AL+ LN AY
Sbjct: 61 DVLNGLQVIVPSNVFTTLKPIIETMLKKGSGGIASVSGILALWAVSRGINALKNGLNMAY 120
Query: 121 RVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 121 GVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLFM 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 181 RWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTRT 240
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + L++L G +LG+ +NA + Y++ +
Sbjct: 241 LLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYFFGE 281
>gi|16762694|ref|NP_458311.1| hypothetical protein STY4195 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766894|ref|NP_462509.1| tRNA-processing ribonuclease [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29144181|ref|NP_807523.1| hypothetical protein t3909 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415511|ref|YP_152586.1| hypothetical protein SPA3464 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161616663|ref|YP_001590628.1| hypothetical protein SPAB_04480 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167549168|ref|ZP_02342927.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167990829|ref|ZP_02571928.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168232440|ref|ZP_02657498.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168241767|ref|ZP_02666699.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168260658|ref|ZP_02682631.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168465106|ref|ZP_02698998.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194444749|ref|YP_002042856.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194447952|ref|YP_002047637.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194470601|ref|ZP_03076585.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197261677|ref|ZP_03161751.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197364437|ref|YP_002144074.1| hypothetical protein SSPA3235 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243309|ref|YP_002217568.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|207858846|ref|YP_002245497.1| hypothetical protein SEN3431 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213052822|ref|ZP_03345700.1| hypothetical protein Salmoneentericaenterica_07843 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213426511|ref|ZP_03359261.1| hypothetical protein SentesTyphi_13370 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213649449|ref|ZP_03379502.1| hypothetical protein SentesTy_20432 [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|224585404|ref|YP_002639203.1| hypothetical protein SPC_3682 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238910364|ref|ZP_04654201.1| hypothetical protein SentesTe_04394 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|25355174|pir||AE0986 probable membrane protein STY4195 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16422170|gb|AAL22468.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16505000|emb|CAD08017.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139818|gb|AAO71383.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56129768|gb|AAV79274.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161366027|gb|ABX69795.1| hypothetical protein SPAB_04480 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194403412|gb|ACF63634.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194406256|gb|ACF66475.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194456965|gb|EDX45804.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|195632377|gb|EDX50861.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197095914|emb|CAR61492.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197239932|gb|EDY22552.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197937825|gb|ACH75158.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205325864|gb|EDZ13703.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205330798|gb|EDZ17562.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333267|gb|EDZ20031.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205338828|gb|EDZ25592.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205350438|gb|EDZ37069.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206710649|emb|CAR35007.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469932|gb|ACN47762.1| hypothetical protein SPC_3682 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248761|emb|CBG26611.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995845|gb|ACY90730.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301160147|emb|CBW19667.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914632|dbj|BAJ38606.1| hypothetical protein STMDT12_C36630 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321226659|gb|EFX51709.1| Inner membrane protein YhjD [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323131968|gb|ADX19398.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|326625350|gb|EGE31695.1| Ribonuclease BN-related domain containing protein [Salmonella
enterica subsp. enterica serovar Dublin str. 3246]
gi|332990459|gb|AEF09442.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 342
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|239979865|ref|ZP_04702389.1| integral membrane protein [Streptomyces albus J1074]
gi|291451722|ref|ZP_06591112.1| membrane protein [Streptomyces albus J1074]
gi|291354671|gb|EFE81573.1| membrane protein [Streptomyces albus J1074]
Length = 324
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 91/264 (34%), Gaps = 8/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ E +A+ ++ + L++FP + A +A + + + D +
Sbjct: 21 HLWRTYETLDRTRWSQLAAAMTYISFLALFPLLTLVAAVAASTLSRERQRELQDQLAEQV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-MRSWY 129
P + + ++ A + I+ + V ++R L + + +
Sbjct: 81 PGISDQLDIASLVD----NAGTVSLIAGALLLFTGVGWVGSIRDCLRAVWELPALEGNPV 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ +L ++ A AL ++ + + + + L
Sbjct: 137 ARKAKDVIVLLGLGAAGIVSLVASTAGGSALGWIARQIGLAETGVGTVLLRAAAFALAVL 196
Query: 190 --FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F+ L++V LPA + ++L + + + + +L YI + S MY
Sbjct: 197 AGFLVLLYVLTLLPAVHPRRRALLGAALIGAVGFELLKLLLGGYISGVAAKS-MYGAFGV 255
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ ++ A A+
Sbjct: 256 PIALLLWINFTAKLVLVCAAWTAT 279
>gi|255010623|ref|ZP_05282749.1| putative ribonuclease [Bacteroides fragilis 3_1_12]
gi|313148434|ref|ZP_07810627.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137201|gb|EFR54561.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 314
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 104/284 (36%), Gaps = 10/284 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++F II D + F+++ +++ ++ + L S+ PF+ + G
Sbjct: 10 KLSLPLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTV-GVFFHMDLANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + I + I ++ +S + + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEITGALRSIIENAENTDSSRSAAIVSLGISIFGATTIFAEIQSSLNTIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + R++SF +L+ + L++ + I +P +
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLVTFTITSIIGELSKKFMVNYPEI--AGS 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ I + I + LP AK K + G I T + +VG + YI
Sbjct: 187 LVQVVGIIINIGVTAIIFTLIFKILPDAKIKSRDVFIGAIVTTLLLLVGQWGISFYIG-I 245
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ T+Y A ++ + ++Y + GAE + K
Sbjct: 246 ANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEFTKAWANEMGGK 289
>gi|197251814|ref|YP_002148536.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197215517|gb|ACH52914.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 342
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|302522751|ref|ZP_07275093.1| ribonuclease BN [Streptomyces sp. SPB78]
gi|302431646|gb|EFL03462.1| ribonuclease BN [Streptomyces sp. SPB78]
Length = 317
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 89/274 (32%), Gaps = 4/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG+ A ++L +L+V P ++ L+ L +
Sbjct: 33 WQLVRDSFVRFRYADGFTNARALALQTVLAVIPLVIAFVGLSTSLHTENLGRLAQLTIHS 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + G A+ + + + + NR Y
Sbjct: 93 VAAGPSTEVVDEALERGEYAAGDGDEIALWFGAIFSLVNVTTAMCQIERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +++ L A + L + V +A + + + R
Sbjct: 153 RPFHLKYGRGLVMALTAGIPLGLGFVVMIAGGDLAGAATTVYGLGDHARTVWEYARWPVG 212
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L I V P K + G W + L + Y+ ++ T+Y
Sbjct: 213 LLLALIAASVVFRSAPRRKQPGYTWLAFGAGVYLSLWTLLTWLLSLYLRLSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++ M+ L++ Y+ V LG A +
Sbjct: 273 LSAFMSLLLWAYLTSVALFLGLSFAAQLEASRAH 306
>gi|301299944|ref|ZP_07206172.1| YihY family protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852450|gb|EFK80106.1| YihY family protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 295
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 61/281 (21%), Positives = 126/281 (44%), Gaps = 4/281 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E D+ +E E D + + I+ ALL++ P I+ N+ + +
Sbjct: 4 LKEKLHKFRDLFLLIVERASEADINSTSITIAYYALLAILPTIILLGNILSIINLKEA-- 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V++ + P + + I +L + G+ ++S + A + S G+ AL+ LN AY
Sbjct: 62 DVLNGLQVIVPSNVFTTLKPIIETMLKKGSGGIASVSGILALWAVSRGINALKNGLNMAY 121
Query: 121 RVVEMRSW--YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V + + R+ S ++ + +V + VF +AL Y+ N + +
Sbjct: 122 GVGKGTGTGAVLGRIFSIFITVVLGLLIVALFLVFSFGQIALDYITPLLNLSTNWIDLFM 181
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +F+ +I ++ +P AK + +LPG I I W+ + F+ Y+ F+
Sbjct: 182 RWKWPTAAIGIFVIIILIYTLIPNAKLHFILVLPGAILATIGWLGLSQGFSIYVRYFTRT 241
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y L + + L++L G +LG+ +NA + Y++ +
Sbjct: 242 LLSYEALGTFIVLLLWLNYTGWVIMLGSVVNAGLEYYFFGE 282
>gi|257469271|ref|ZP_05633365.1| ribonuclease BN [Fusobacterium ulcerans ATCC 49185]
gi|317063518|ref|ZP_07928003.1| ribonuclease BN [Fusobacterium ulcerans ATCC 49185]
gi|313689194|gb|EFS26029.1| ribonuclease BN [Fusobacterium ulcerans ATCC 49185]
Length = 419
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/262 (17%), Positives = 97/262 (37%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I A+E++ + + + LLS+ P +L +LG + + +
Sbjct: 27 IQRALENYKRANSALWVTSLCFYTLLSLVPVFAILFSLGSWLGVAESIIIHLSKYSPLNE 86
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E+I + + + L I L+ + + S N ++V + R
Sbjct: 87 EMITFLVQFSENLLENARSGVLAGIGFLSLGWTLITMFSIVEKSFNDIWQVEKSRMILRK 146
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ LL + ++ ++ V I L + P L L++F+
Sbjct: 147 ITDYIAFFLLFPLLILTINGGMVIIGKKLEGIYDISPYL----------LQVIPSLSIFL 196
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+++ +P K K++ +FT + + F H V TY+ +Y + I
Sbjct: 197 FFTALYMLIPNTKVKLIPAFFSAVFTSVLFSGLQYFFIHLQVMIITYNKIYGSFSVIFIF 256
Query: 252 LVFLYMLGVFFILGAELNASMI 273
++L ++ F ILGA L+ +
Sbjct: 257 FLWLKIMWFFIILGAHLSYFLQ 278
>gi|318080612|ref|ZP_07987944.1| integral membrane protein [Streptomyces sp. SA3_actF]
Length = 317
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 103/271 (38%), Gaps = 13/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPTVI 63
++ D + +E +A+ + LLSV P ++ L G++ F +
Sbjct: 2 LVKDTVNSCMEYRILGLAAEAAFFTLLSVPPLLLCLVGLLGYVDAWTGADTIAGFEQHFL 61
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + I + I + + + +I + A + S V ++ Y +
Sbjct: 62 DASRAVLSDQGVHDIAEPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTITVMYGLD 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+R TRL+SFG ++ + + + VA P + ++ + +
Sbjct: 122 GVRGIVATRLLSFGLFIVGLLVCSVALPLMVAGPDTVVHLLPWSGL------AVQILYWP 175
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + L ++ +S + +PG W V + Y+ + T+Y
Sbjct: 176 VVIILCVVFLTTLYHVSVPVRSPWIEDVPGSFVALAMWFVCSFALRIYLTSTIEGPTIYG 235
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA+ + L+++ + ++GA +NA++
Sbjct: 236 SLAAPVAVLLWIGVSAFAVLVGAAMNAAIDR 266
>gi|60682519|ref|YP_212663.1| putative ribonuclease [Bacteroides fragilis NCTC 9343]
gi|60493953|emb|CAH08744.1| putative ribonuclease [Bacteroides fragilis NCTC 9343]
Length = 311
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/284 (16%), Positives = 105/284 (36%), Gaps = 10/284 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D + F+++ +++ ++ + L S+ PF+ + G
Sbjct: 10 RLSLSLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTV-GVFFHMDLANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + I ++ +S + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTDSSRSAAFVSLGISILGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + R++SF +L+ + L+I + I +P + +
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEVAD--S 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ I M I + LP AK K + G + T I ++G + YI
Sbjct: 187 LVKVVGIIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTILLLIGQWGISFYIG-I 245
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ T+Y A ++ + ++Y + GAE + K
Sbjct: 246 ANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEFTKAWANEMGGK 289
>gi|270264560|ref|ZP_06192826.1| putative ribonuclease [Serratia odorifera 4Rx13]
gi|270041696|gb|EFA14794.1| putative ribonuclease [Serratia odorifera 4Rx13]
Length = 339
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 94/286 (32%), Gaps = 11/286 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ A E F + G + I+ + LS+ P ++ GF+ + +I
Sbjct: 48 WPSIAHLLRATERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAGLI 107
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + G+ + + + A Y + + LR ++ R V
Sbjct: 108 NKIVGSISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAIRAQSRDV 167
Query: 124 EMRSWYITRLISFGYV--------LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
R+ + F Y L+ ++ + + A + L
Sbjct: 168 WERNPQDQEKLYFKYTRDFISLTGLVVALIITLTLTSIAGSAQAAIVSALGLEGIEWLRP 227
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + ++LA ++ +++ LP K K ++L G + I + V + T +
Sbjct: 228 AMTLIALSISILANYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQV 287
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ S A S++ + F Y + A A+ + P
Sbjct: 288 AK-SPSGAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYKEDKTLP 332
>gi|291619367|ref|YP_003522109.1| YhjD [Pantoea ananatis LMG 20103]
gi|291154397|gb|ADD78981.1| YhjD [Pantoea ananatis LMG 20103]
Length = 339
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A++ F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 51 HFIRALDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTDIINKIVS 110
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + L A Y N + LR ++ R V R
Sbjct: 111 SISDPSLATTLKNTVNTAIQQRATVGITGLLLALYSGLNWMGNLREAIRAQSRDVWERQP 170
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+ + F + + LVI + A A + + L +
Sbjct: 171 DDKEKIWKRYIRDFLSLTGLMLALVITLSLTSVAGSAQAMIVSALGLDGIEWLRPALTII 230
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++A ++ +++ LP K + ++L G + + + + + T + +T S
Sbjct: 231 ATSISVMANYLLFLWIFWILPRHKPRKKALLRGTLLAAVGFEIIKFVMTLTLPKLAT-SP 289
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 290 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAKYKDDPRMP 330
>gi|62182112|ref|YP_218529.1| hypothetical protein SC3542 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62129745|gb|AAX67448.1| putative tRNA-processing ribonuclease [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322716600|gb|EFZ08171.1| Inner membrane protein yhjD [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 342
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 92/281 (32%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLAL--------AYVRKFFPALGNLLLIIWNG 180
I Y+ + ++ + + + + + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMSISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|134103022|ref|YP_001108683.1| tRNA-processing ribonuclease BN [Saccharopolyspora erythraea NRRL
2338]
gi|291005222|ref|ZP_06563195.1| tRNA-processing ribonuclease BN [Saccharopolyspora erythraea NRRL
2338]
gi|133915645|emb|CAM05758.1| possible tRNA-processing ribonuclease BN [Saccharopolyspora
erythraea NRRL 2338]
Length = 338
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 105/279 (37%), Gaps = 6/279 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
D + A + + G A+ I+ ++L++ P ++ +AGF+ G + + +
Sbjct: 20 WLDRLIRAANRYQSQYGDYYAAAITYFSVLALVPLLMIAFAIAGFVLGGNPDLLAQLRNS 79
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ A P + + ++ A + I +AA Y + + LR +L +
Sbjct: 80 ITTAVPNPAMSQMLNNVVDQAIGQAGAVGIIGLVAALYSGLSWMTNLREALTALWTQEPE 139
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI---IWNGRI 182
+ + + +S L+ + +SF A+ + + + + +
Sbjct: 140 QQPVLRKYVSDLLSLIGLGLAMGISFGISAVGGGVGRMLLELAGIDDTPFARAGLQVLAT 199
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ A ++ +++ LP + S + G +F + + + + Y+ + + S
Sbjct: 200 LLSLAASWLVFLWILARLPRKPVSLRSAVWGALFGAVGFEILKQVGVFYLNSVTG-SPAA 258
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A I+ LVF Y+ F + AS R P
Sbjct: 259 AAFGPILGLLVFSYLTSRFILFVTAWTASAPENQERAVP 297
>gi|332361950|gb|EGJ39752.1| ribonuclease BN [Streptococcus sanguinis SK49]
Length = 307
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/269 (20%), Positives = 114/269 (42%), Gaps = 5/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + D + ++ L+SVFP ++ N+ + + + +
Sbjct: 17 QFLRAFFRFYRAADSELTSVAVAYYWLISVFPLLLIVVNILPYFNIP--IADFLTAIKDM 74
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 75 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQFAFNKAYGVAKSRGLI 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S + + F+ + ++L ++R ++ L + N L
Sbjct: 135 SHRVMSLVVSIGLQILFAFTLFLTMFGHMSLDFLRTYWKLDNQLYQHLQNFTEPLIYALL 194
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ + FLP K K +LPG +F ++ + +F+ Y+ + + +SI
Sbjct: 195 FAVLVMFYYFLPNVKINKKRYVLPGSVFVILTILALMNIFSVYMDNYLNHLVDVRFFSSI 254
Query: 249 M--TCLVFLYMLGVFFILGAELNASMIIY 275
+ + + M+ I+GA LNAS+ Y
Sbjct: 255 IMVVMMFWFIMIAKILIVGAVLNASIQSY 283
>gi|301163995|emb|CBW23550.1| putative ribonuclease [Bacteroides fragilis 638R]
Length = 311
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/284 (16%), Positives = 107/284 (37%), Gaps = 10/284 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D I F+++ +++ ++ + L S+ PF+ + G
Sbjct: 10 RLSLSLLFKIIKDTIWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTV-GVFFHMDLANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + I P++ +S + + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTAPSRSAAFVSLGISIFGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + R++SF +L+ + L+I + I +P + +
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEVAD--S 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ I M I + LP AK K + G + T I ++G + YI
Sbjct: 187 LVKVVGIIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTILLLIGQWGISFYIG-I 245
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ T+Y A ++ + ++Y + GAE + K
Sbjct: 246 ANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEFTKAWANEMGSK 289
>gi|227890331|ref|ZP_04008136.1| possible ribonuclease BN [Lactobacillus johnsonii ATCC 33200]
gi|227849145|gb|EEJ59231.1| possible ribonuclease BN [Lactobacillus johnsonii ATCC 33200]
Length = 302
Score = 107 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 110/279 (39%), Gaps = 8/279 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + ++ + + + I+ LLS+FP I+ N+ L + +
Sbjct: 11 RITEFFQLLSKYISQGEINQTSIIIAYYVLLSIFPIIIIIGNVLPLLNID--TEPIARYL 68
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+P I+ I I +L + G ++ + A + S V ++R++ N+ Y V +
Sbjct: 69 ELIFPSQISSLIMPIINALLKKHSSGFISLGIVIAIWSLSCLVNSIRLAANKIYGVDKKE 128
Query: 127 SWYITR------LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+F ++ V I+ FV + ++ F + + N
Sbjct: 129 KGKSWWNYLLARTFTFVLSVILVVGFSIIIFVVTFGRQIMEFLAPIFNLSLWWVYKLENY 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R +L + I ++++ +P + + PGV FT +SW + F Y+ F T
Sbjct: 189 RWPIIILVMVIINLYINYVIPNITVRKRIVWPGVWFTVVSWSALSYFFGLYLRQFGTRWQ 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + S + +++L + +LG LNA+ RK
Sbjct: 249 NYGIVGSFIIFMLWLNVGSFLLLLGICLNATGDELKGRK 287
>gi|291525349|emb|CBK90936.1| Predicted membrane protein [Eubacterium rectale DSM 17629]
Length = 335
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 2/226 (0%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ PE + D +V A L + A Y SS + ++
Sbjct: 108 PLTEADFLMWASSFIPESFGDIMKDLASEVYASGTGRLSIT-MITAVYLSSKAFISFQLG 166
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLL 174
L+ Y V E R++ + R+ S Y ++ ++ L+ + + V + Y +G+++
Sbjct: 167 LDDMYHVKENRNFILRRIYSVLYSIVFALALIFLLGIMVFGNMLRKMYFSNVHHIIGSII 226
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + R+ + L + +++FLP K + LPG +F +W++ + +F+ Y+
Sbjct: 227 GSVVDYRLVICLPVLILFFWVIYVFLPNKKQRAKYQLPGAVFAAAAWMIFSGIFSVYVDK 286
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ YS+ Y + +I +V+LY +G +N + KK
Sbjct: 287 YNNYSSFYGTMTTIALIMVWLYGCMYVLFIGGIINRTWEERMEAKK 332
>gi|108758048|ref|YP_633780.1| YihY family protein [Myxococcus xanthus DK 1622]
gi|108461928|gb|ABF87113.1| YihY family protein [Myxococcus xanthus DK 1622]
Length = 461
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 96/268 (35%), Gaps = 11/268 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F E+ A+ ++ ++ S+ P + L +F + VV
Sbjct: 44 KTVAQGFRGENLRLRAAALTYVSMFSLVPLLTVALVLLTAFHQDEFKEKLRFVVSEVLNP 103
Query: 73 VIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + + L + ++ LA + + + L ++N + + R W I
Sbjct: 104 GVRGKSSQFLDRFLNPTHTVAIGSVGFLAVLLSAGSLLRQLDGAVNELWGIRRQRPWRIR 163
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
LI G +L+ L + + + L + + T L
Sbjct: 164 LLIYSGLLLVGPFFLALSFSGTGKVRVFLQSHAPYAG----------AFILLGTTLVTVA 213
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ + P A ++ S L G + + W ++ + Y+ +Y L ++
Sbjct: 214 SLTLLYYWTPYAHVRVRSALAGGLVAGLGWTFAKQVYAAFAERSFQYNPLYGSLGALPLF 273
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++Y+ + + GA L+ ++ +R
Sbjct: 274 LAWVYVSWLLVLFGARLSYAVEHTAFRH 301
>gi|238022761|ref|ZP_04603187.1| hypothetical protein GCWU000324_02672 [Kingella oralis ATCC 51147]
gi|237865964|gb|EEP67100.1| hypothetical protein GCWU000324_02672 [Kingella oralis ATCC 51147]
Length = 396
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 88/266 (33%), Gaps = 10/266 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVID 64
V F E + A ++ + LL++ P + + V +
Sbjct: 10 WRVAGFARFLWRRFNEVEVLQAAGSLTFTTLLALVPILTVLLVVVTVFPLFGGTVDAFML 69
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ + D + + A L T+ V + + N+ +RV +
Sbjct: 70 FLNRTIVPSGVSAVVDYLNEFKL-QAGRLTTLGVGLMVVTVLMMVNTVEQTFNQIWRVQQ 128
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RSW++ + V+L + + + + FF A + + ++
Sbjct: 129 RRSWWVRLPMYLVLVVLVPAVVGVSVSLSTNLL--------FFGAAQSPAWFSGSLKVVH 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + L V P+ + + G T V F Y+ F +Y +Y
Sbjct: 181 QLLLGMLALTLVFRVTPSCYVPMRHAVLGAGLTAALLEVAKWGFGVYLRHFHSYELVYGA 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
A + L++L++L + GA A
Sbjct: 241 FAIVPIFLIWLHLLWSIVLGGALFTA 266
>gi|205354775|ref|YP_002228576.1| hypothetical protein SG3828 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205274556|emb|CAR39605.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326629916|gb|EGE36259.1| putative tRNA processing ribonuclease BN [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 342
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIASIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|170022367|ref|YP_001718872.1| ribonuclease [Yersinia pseudotuberculosis YPIII]
gi|169748901|gb|ACA66419.1| ribonuclease [Yersinia pseudotuberculosis YPIII]
Length = 366
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ +
Sbjct: 50 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAMVGFVLASNPDLLAELINKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + A Y + + LR ++ R V R+
Sbjct: 110 SISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAQSRDVWERNP 169
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F ++ V L+I + A A + + L +
Sbjct: 170 QDKEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQAAIVNALGLGGIEWLRPAMTLI 229
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + V + T + ++ S
Sbjct: 230 ALSISIAANYLLFLWIFWILPRNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SP 288
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 289 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 319
>gi|116628245|ref|YP_820864.1| ribonuclease BN-like family protein [Streptococcus thermophilus
LMD-9]
gi|116101522|gb|ABJ66668.1| Ribonuclease BN-like family enzyme [Streptococcus thermophilus
LMD-9]
Length = 314
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/274 (19%), Positives = 114/274 (41%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + H+ + + ++ +L+VFP IV AN+ +L ++ +
Sbjct: 16 WRPFQVYLSHYRSAEIDISSVAVAYYLILTVFPLIVIAANVFPYLNIDTT--DLLKFMNE 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ P + + + + P+ L +++L + + +L+ ++++ Y E R
Sbjct: 74 HLPKHFYAPAANVVQDIFSTPSGRLLGVASLTGFWTMIKSLSSLQKAIDKVYGASEHRDV 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I+ +I L+ L + I L + + +P NL +I N ++
Sbjct: 134 FISHIIGGLLSLVILFLLTFALMLSTIIQSVLRIINQTYPIGSNLTQLILNSIQPLSVAV 193
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G++ ++ LP K + I I+PG IFT + + LF Y++ + S
Sbjct: 194 VFLGMMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIHTLSRLVDIKLFGS 253
Query: 248 IM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L I GA NA+ +
Sbjct: 254 IMIFIFMLWFIFLARILIFGAIFNATYQELKQGE 287
>gi|322613999|gb|EFY10935.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617891|gb|EFY14784.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322625494|gb|EFY22320.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322629959|gb|EFY26732.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632152|gb|EFY28903.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322636498|gb|EFY33205.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322643132|gb|EFY39706.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322644647|gb|EFY41183.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322652755|gb|EFY49094.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659056|gb|EFY55308.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322663242|gb|EFY59446.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668728|gb|EFY64881.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674468|gb|EFY70561.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678325|gb|EFY74386.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322682417|gb|EFY78438.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322684131|gb|EFY80137.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323192313|gb|EFZ77545.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323196259|gb|EFZ81411.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323201407|gb|EFZ86473.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323206483|gb|EFZ91444.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323212075|gb|EFZ96902.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323216980|gb|EGA01703.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323220345|gb|EGA04799.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323224393|gb|EGA08682.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323228322|gb|EGA12453.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323233411|gb|EGA17504.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323237128|gb|EGA21195.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243657|gb|EGA27673.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323246099|gb|EGA30086.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323250879|gb|EGA34757.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323257628|gb|EGA41314.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323261835|gb|EGA45402.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323266108|gb|EGA49599.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323268652|gb|EGA52119.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 342
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|260579132|ref|ZP_05847024.1| ribonuclease [Corynebacterium jeikeium ATCC 43734]
gi|258602731|gb|EEW16016.1| ribonuclease [Corynebacterium jeikeium ATCC 43734]
Length = 360
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 105/282 (37%), Gaps = 8/282 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
D + + + E+ G A+ I+ +++++FP ++ + + G + + V+
Sbjct: 34 WPWLDHVLRMQDRYTEQGGNQYAAGITYFSVMTIFPLMMLTLAVLAMILAGNERLLNDVM 93
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D V + + + I Q + K +F+I L A + + LR+ ++ ++V
Sbjct: 94 DKVANMGDGNMGEVLQTIIEQSI-EQRKSVFSIGLLLALWTGLGWIAHLRLGVSEMWKVD 152
Query: 124 EMRS-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWN 179
+ + ++ ++ V+L+ + L L ++ I +
Sbjct: 153 GKPAGFVSGKVKDLIGLIGLLVSLIAAFAITTIGNSGLTTQLLDAVGLADVPGIRYITFA 212
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++A F ++ L+LP K S + I + + V T + + +
Sbjct: 213 VALLVALIANFCVFFWMILYLPRTKVPRRSAVKAAIIGAVLFEVFKQFATVFFSNALS-N 271
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A ++ +V +Y + + + A+ +P
Sbjct: 272 PAGAAFGPVIGVMVLMYFIWRILLYCSAWAATTPESLANLRP 313
>gi|53714497|ref|YP_100489.1| putative serum resistance protein BrkB [Bacteroides fragilis YCH46]
gi|52217362|dbj|BAD49955.1| putative serum resistance protein BrkB [Bacteroides fragilis YCH46]
Length = 311
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/284 (16%), Positives = 104/284 (36%), Gaps = 10/284 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R ++F II D + F+++ +++ ++ + L S+ PF+ + G
Sbjct: 10 RLSLSLLFKIIKDTVWGFIDDSVMRLSASLAYATLFSIIPFLSLLVTV-GVFFHMDLANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + I ++ +S + ++ ++ SLN +
Sbjct: 69 LYVQLQPIVGPEVTEALRSIIENAENTDSSRSAAFVSLGISILGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + R++SF +L+ + L+I + I +P +
Sbjct: 129 GIKAVPKKSWLKFIKNRILSFSIILVFAFILLITFTITNIIGELSQKFIFKYPEAAD--S 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ I M I + LP AK K + G + T I ++G + YI
Sbjct: 187 LVKVVGIIINMSVTTIIFTLIFKILPDAKIKSKDVCIGAVVTTILLLIGQWGISFYIG-I 245
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ T+Y A ++ + ++Y + GAE + K
Sbjct: 246 ANVGTVYGAAAFMVVFVTWIYYSSIIIYTGAEFTKAWANEMGGK 289
>gi|259500503|ref|ZP_05743405.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|302191192|ref|ZP_07267446.1| hypothetical protein LineA_04212 [Lactobacillus iners AB-1]
gi|309805277|ref|ZP_07699329.1| YihY family protein [Lactobacillus iners LactinV 09V1-c]
gi|309806429|ref|ZP_07700437.1| YihY family protein [Lactobacillus iners LactinV 03V1-b]
gi|325912603|ref|ZP_08174986.1| YihY family protein [Lactobacillus iners UPII 60-B]
gi|259167887|gb|EEW52382.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|308165511|gb|EFO67742.1| YihY family protein [Lactobacillus iners LactinV 09V1-c]
gi|308167182|gb|EFO69353.1| YihY family protein [Lactobacillus iners LactinV 03V1-b]
gi|325478024|gb|EGC81153.1| YihY family protein [Lactobacillus iners UPII 60-B]
Length = 306
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 107/265 (40%), Gaps = 8/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE------MRSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQQSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F Y + + + L
Sbjct: 199 NTYINYTIPNISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASMIIYYW 277
++L + + F++G LNA++ +
Sbjct: 259 MWLNLAAILFLIGVCLNATISYIKY 283
>gi|170767108|ref|ZP_02901561.1| putative ribonuclease [Escherichia albertii TW07627]
gi|170124546|gb|EDS93477.1| putative ribonuclease [Escherichia albertii TW07627]
Length = 333
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 95/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ AGF+ + + D
Sbjct: 46 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFILASHPMLLQNIFDK 105
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N LR ++ R V
Sbjct: 106 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWTGNLREAIRAQSRDVWE 165
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 166 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIITALHLNSIEWLKPTW 225
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G + I + V ++ T+ + +
Sbjct: 226 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTLLAAIGFEVIKIVMTYTLPSLMK 285
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 286 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 328
>gi|320183470|gb|EFW58319.1| Inner membrane protein YhjD [Shigella flexneri CDC 796-83]
Length = 337
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 93/282 (32%), Gaps = 11/282 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S A S++ + F Y + A A+ +
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPR 330
>gi|284029292|ref|YP_003379223.1| ribonuclease BN [Kribbella flavida DSM 17836]
gi|283808585|gb|ADB30424.1| ribonuclease BN [Kribbella flavida DSM 17836]
Length = 376
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 95/263 (36%), Gaps = 7/263 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ A + + + G +A S LS+FP IV A + G L V + + P
Sbjct: 19 LWRAWKRYGDRRGNRLAGATSFFGFLSMFPLIVLTAAVTGKLLDPSAVDRLKKAIATNLP 78
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-SWYI 130
+ + D ++ A + +S ++ +++LR S+ + + + +
Sbjct: 79 GIGEQIDLDTLI----SNAGAIGLVSGVSLLLTGLGWIDSLRASIRSMHELDDQPGNVVK 134
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATMLA 188
++ G ++ + +I + + + ++ G L I I + A
Sbjct: 135 LKVFDLGALIGLGLIGLIATGASSVLVGLSDKIVEWVGLDGTWLARWGIGLISILVGVAA 194
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ +++ +P + + + + + L Y+ + Y LA
Sbjct: 195 GALLFLYLQTAMPRILLPRKVAMIAALVGGVLFYLAQRLGNSYVKNVIGNNAAYGTLALP 254
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ LV++Y++ +L A
Sbjct: 255 LALLVWIYLMTRAIMLIAAWTKE 277
>gi|259906793|ref|YP_002647149.1| Predicted membrane protein [Erwinia pyrifoliae Ep1/96]
gi|224962415|emb|CAX53870.1| Predicted membrane protein [Erwinia pyrifoliae Ep1/96]
gi|283476579|emb|CAY72407.1| Inner membrane protein yhjD [Erwinia pyrifoliae DSM 12163]
Length = 340
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 93/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A E F + G + I+ + LS+ P ++ GF+ + +I + G
Sbjct: 52 HFLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQSLLTELIGKIVG 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + L A Y + + LR ++ R V R
Sbjct: 112 NISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERAP 171
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+ F ++ + L+I + A A + + + L ++
Sbjct: 172 QDQEKIWFKYSRDFISLIGLVLALIITLSLTSIAGAAQASIVRALGLENIEWLRPVMTLI 231
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 232 ALSISIFANYLLFLWIFWILPRHKPRKRALFRGTLLAAIGFEAIKFIMTLTLPKLAS-SP 290
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 291 SGAAFGSVLGLMAFFYFFARLILFCAAWIATAQYQNDPENP 331
>gi|302556836|ref|ZP_07309178.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
gi|302474454|gb|EFL37547.1| ribonuclease BN [Streptomyces griseoflavus Tu4000]
Length = 321
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 82/274 (29%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG+ A ++ +L + P V LA + + +
Sbjct: 33 LRLLTDSFARFRFADGFTNARALAFQFVLGLVPCTVALVGLATSVHTESVGRVIELTLGR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + + A ++ + + NR Y +
Sbjct: 93 IVPGTGAGLVEDALDGTRRSAHDDFAGPLALWLGLGFALLNLASAMGQIERGANRIYGIE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R + L A + LV+ V VA V + G +
Sbjct: 153 RDRPLPRKYGRAVVLALTAGLPLVLGFVVLVAGDAVTDAVVEVAGDPGGGPGWWTALELP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ ++ + + P + G + WV L Y+ + +Y
Sbjct: 213 LGLALAWVASAVIFRWSPRRTQPGYTWLAFGSAVHLLLWVAATWLLALYVKGSGAFGALY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L +++ L++ Y+ V LG A +
Sbjct: 273 GPLTAVIALLLWAYLTAVALFLGIAFAAQLEAAR 306
>gi|312871837|ref|ZP_07731925.1| YihY family protein [Lactobacillus iners LEAF 3008A-a]
gi|329920156|ref|ZP_08276987.1| YihY family protein [Lactobacillus iners SPIN 1401G]
gi|311092779|gb|EFQ51135.1| YihY family protein [Lactobacillus iners LEAF 3008A-a]
gi|328936610|gb|EGG33054.1| YihY family protein [Lactobacillus iners SPIN 1401G]
Length = 306
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 107/265 (40%), Gaps = 8/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE------MRSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQHSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F Y + + + L
Sbjct: 199 NTYINYTIPNISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASMIIYYW 277
++L + + F++G LNA++ +
Sbjct: 259 MWLNLAAILFLIGVCLNATISYIKY 283
>gi|256375904|ref|YP_003099564.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
gi|255920207|gb|ACU35718.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
Length = 307
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/269 (13%), Positives = 88/269 (32%), Gaps = 2/269 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + + E A+ ++ +L + + L GFLG V+ V
Sbjct: 14 RSWWTVFRTTVVWYREHHLSDRAAALTHYTVLVMLSGALLPVALVGFLG-DDTRSKVMTV 72
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + + + A L + A + + A + V E
Sbjct: 73 ISPLAPSRVHGILVVALDGLRPAVAGPLAAVCLFVAVWSAYRFAGAFLRACAACNGVKEH 132
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS + + G L V +++ V V + + + +
Sbjct: 133 RSLWKLVPLRVGLTLGVLVLFILVVGVVAFTGDIADEVAALAGVRASTVQLWDVAKWPVL 192
Query: 186 MLALFIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L + + PA + I PG + + +V Y +Y +Y
Sbjct: 193 VLLAGCAVRLLFAAPPATRRPGRLGITPGALLALVLCLVATFGVGVYAAYAGSYDRVYGS 252
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMI 273
+ ++ + ++++ ++G ++A++
Sbjct: 253 IIGLVVIMAWIWLACTALLVGVAMDAALQ 281
>gi|168818571|ref|ZP_02830571.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205344490|gb|EDZ31254.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320088027|emb|CBY97789.1| Inner membrane protein yhjD [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 342
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 337
>gi|307705268|ref|ZP_07642134.1| ribonuclease BN-like family protein [Streptococcus mitis SK597]
gi|307621181|gb|EFO00252.1| ribonuclease BN-like family protein [Streptococcus mitis SK597]
Length = 286
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/281 (19%), Positives = 123/281 (43%), Gaps = 7/281 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLVKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + VV P+ + + I +VL P+ GL + + L+A + S + L+ + N+
Sbjct: 59 VSNFLKVVNEFLPDTMYDVVAKIITEVLTQPSTGLLSFAVLSALWTFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +L+S + + F+ V + L V+ ++ + L +
Sbjct: 119 AYGVAKNRGMISHQLMSLFVSFGLQILFTLALFLSVFGRMLLNLVKSYWKSDSPLFDYLQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +F L+ ++ FLP K + +LPG F ++ + +F+ Y+ +
Sbjct: 179 DLTGPLVYALIFAILVMLYYFLPNVKVRRIRHVLPGSAFVLLTLALLLNIFSVYVNNYVN 238
Query: 238 YSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYY 276
+ +SI+ + + ++ I+GA +NAS+
Sbjct: 239 HLVDVRFFSSIVVVVMMFWFILIAKILIVGAVINASVQSLK 279
>gi|257452626|ref|ZP_05617925.1| ribonuclease BN [Fusobacterium sp. 3_1_5R]
gi|257466482|ref|ZP_05630793.1| ribonuclease BN [Fusobacterium gonidiaformans ATCC 25563]
gi|315917639|ref|ZP_07913879.1| ribonuclease BN [Fusobacterium gonidiaformans ATCC 25563]
gi|317059165|ref|ZP_07923650.1| ribonuclease BN [Fusobacterium sp. 3_1_5R]
gi|313684841|gb|EFS21676.1| ribonuclease BN [Fusobacterium sp. 3_1_5R]
gi|313691514|gb|EFS28349.1| ribonuclease BN [Fusobacterium gonidiaformans ATCC 25563]
Length = 394
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 89/264 (33%), Gaps = 19/264 (7%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I A+ + E + + + +LS+ P ++ +LG +++ ID
Sbjct: 17 IKHALWKYKEANSNLWVTSLCYYTVLSMIPIFAILFSIGTWLGLGEYLLKQIDNHSPIKG 76
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E I +T + + L + L + + + + N + + RS+
Sbjct: 77 EAIQLLLTFTDNLLTNARSGVLAGLGFLFLIWSLISMFSIVEKAFNDIWDIDATRSFVRK 136
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ +L +++ + + I ++ +
Sbjct: 137 ISDYLTFFILLPTLILVSNASSLLIQN-------------------DFLSKILPYFSVLL 177
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + + +P + K + FT + + + F + V + Y+ +Y + I
Sbjct: 178 FFMALFMVMPNTEVKWLPAFVASFFTSVMFSIFQYAFIYLQVLINAYNMIYGSFSVIFIF 237
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
L++L + ILGA L+ +
Sbjct: 238 LIWLRIAWFLIILGAHLSYLLQNR 261
>gi|238750207|ref|ZP_04611709.1| Inner membrane protein yhjD [Yersinia rohdei ATCC 43380]
gi|238711440|gb|EEQ03656.1| Inner membrane protein yhjD [Yersinia rohdei ATCC 43380]
Length = 339
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 94/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F ++ + L+I + A + + + L ++
Sbjct: 161 QDQEKFYYRYARDFVSLIGLVIALIITLSLTSVAGAAQSAIVNALGLGGIEWLRPVMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 ALSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 310
>gi|327395690|dbj|BAK13112.1| inner membrane protein YhjD [Pantoea ananatis AJ13355]
Length = 339
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A++ F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 51 HFIRALDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTDIINKIVS 110
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + L A Y N + LR ++ R V R
Sbjct: 111 SISDPSLATTLKNTVNTAIQQRATVGITGLLLALYSGLNWMGNLREAIRAQSRDVWERQP 170
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+ + F + + LVI + A A + + L +
Sbjct: 171 DDKEKIWKRYIRDFLSLTGLMLALVITLSLTSVAGSAQAMIVSALGLDGIEWLRPALTII 230
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++A ++ +++ LP K + ++L G + + + + + T + +T S
Sbjct: 231 ATSISVMANYLLFLWIFWILPRHKPRKKALLRGTLLAAVGFEIIKFVMTLTLPKLAT-SP 289
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 290 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAKYKDDPRMP 330
>gi|227883682|ref|ZP_04001487.1| ribonuclease [Escherichia coli 83972]
gi|227839262|gb|EEJ49728.1| ribonuclease [Escherichia coli 83972]
gi|307555625|gb|ADN48400.1| putative tRNA-processing ribonuclease YhjD [Escherichia coli ABU
83972]
Length = 337
Score = 107 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATELFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWE 169
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R +++ L F ++ + L++ + A + + L
Sbjct: 170 RSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 230 RLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 290 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 332
>gi|262201713|ref|YP_003272921.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085060|gb|ACY21028.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 377
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 100/271 (36%), Gaps = 7/271 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ + +E + + G A+ IS + +L++ P I+ G +A F+ + + +
Sbjct: 52 WPWINHLVATVERYNDRRGNVYAAGISFNGILAIVPIIMVGFAIAAFVLASRPELLDELK 111
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + A P + D I + A + I AA+ + +R++ Y
Sbjct: 112 NAIVDAMPGQAGDQLGDVIDSAIDSRAT-VGLIGLFGAAFTGIGWISGVRVAFTEMYGGR 170
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNG 180
R+ ++++ +L V + L + +L + ++
Sbjct: 171 VDRNPVMSKVWDLVTFVLLGVAFAATMALTALGNSGLTTKLLSWVSLDDASWAPVVVRVV 230
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I ++ A ++ FV LP ++ + + T I++ + L Y+ + + S
Sbjct: 231 SILISVFASWLLFTFVLARLPLVPLPFVNAMKAGLATAIAFEIVKSLGGLYLKSVLS-SP 289
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
I+ +VF Y+ + + A+
Sbjct: 290 AGIAFGPILGLMVFAYLASRIVLYASAWCAT 320
>gi|308188570|ref|YP_003932701.1| hypothetical protein Pvag_3103 [Pantoea vagans C9-1]
gi|308059080|gb|ADO11252.1| Uncharacterized 36.0 kDa protein in kdgK 5'region [Pantoea vagans
C9-1]
Length = 339
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 92/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A++ F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 49 HFIRALDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTDIINKIVS 108
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + L A Y N + LR ++ R V R
Sbjct: 109 SISDPTLATTLKNTVNTAIQQRATVGITGLLLALYSGLNWMGNLREAIRAQSRDVWERKP 168
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+ + F + + LVI + A A + + L +
Sbjct: 169 DDKEKIWKRYIRDFLSLTGLMLALVITLSLTSVAGSAQATIVSALGLDGIEWLRPALTII 228
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++LA ++ +++ LP K + ++ G + I + V + T + +T S
Sbjct: 229 ATSISVLANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEVIKFVMTLTLPKLAT-SP 287
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 288 SGAAFGSVLGLMAFFYFFARLTLFCAAWIAT 318
>gi|89900459|ref|YP_522930.1| ribonuclease BN [Rhodoferax ferrireducens T118]
gi|89345196|gb|ABD69399.1| ribonuclease BN, putative [Rhodoferax ferrireducens T118]
Length = 326
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 41/281 (14%), Positives = 96/281 (34%), Gaps = 6/281 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
Y ++++I ++ ++ + +M + ++ L S+ P ++ +AG F GA +
Sbjct: 5 YHKQIWNLINKSVAAWINDYAPSMGAALAYYTLFSMAPLLIIVIAVAGLFFGAEAARGEI 64
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYR 121
+ + G A + + L +S ++ L+ +L+R +R
Sbjct: 65 VAQIQGIIGWEGAVAVQGLLKSAREPAQDLLAALVSLATLLIGATTVFAELQSALDRIWR 124
Query: 122 VVEMRS---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V + L + ++ V + A + ++
Sbjct: 125 VPASVKGNGLWTLLRTRLLSFGLVLGLVFLLLVSLVVSAMIAALGKWSDGLFQGWETVLH 184
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + ++ +P A + G T + + +G L Y+
Sbjct: 185 LLTFGVSFAISTLLFAMIYKLMPRASIAWRDVWIGAAVTSLLFEIGKFLIGLYLGKTG-V 243
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + S++ LV++Y F+LGAE Y K
Sbjct: 244 ASSFGAAGSLVLLLVWVYFSAQIFLLGAEFTWVFSHEYGSK 284
>gi|42519468|ref|NP_965398.1| hypothetical protein LJ1594 [Lactobacillus johnsonii NCC 533]
gi|268319158|ref|YP_003292814.1| hypothetical protein FI9785_671 [Lactobacillus johnsonii FI9785]
gi|41583756|gb|AAS09364.1| hypothetical protein LJ_1594 [Lactobacillus johnsonii NCC 533]
gi|262397533|emb|CAX66547.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
gi|329667010|gb|AEB92958.1| ribonuclease [Lactobacillus johnsonii DPC 6026]
Length = 302
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 110/279 (39%), Gaps = 8/279 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + ++ + + + I+ LLS+FP I+ N+ L + +
Sbjct: 11 RITEFFQLLSKYISQGEINQTSIIIAYYVLLSIFPIIIIIGNVLPLLNID--TEPIARYL 68
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+P ++ I I +L + G ++ + A + S V ++R++ N+ Y V +
Sbjct: 69 ELIFPSQVSSLIMPIINALLKKHSSGFISLGIVIAIWSLSCLVNSIRLAANKIYGVDKKE 128
Query: 127 SWYITR------LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+F ++ V I+ FV + ++ F + + N
Sbjct: 129 KGKSWWNYLLARTFTFVLSVILVVGFSIIIFVVTFGRQIMEFLAPIFNLSLWWVYKLENY 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R +L + I ++++ +P + + PGV FT +SW + F Y+ F T
Sbjct: 189 RWPIIILVMVIINLYINYVIPNITVQKRIVWPGVWFTVVSWSALSYFFGLYLRQFGTRWQ 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + S + +++L + +LG LNA+ RK
Sbjct: 249 NYGIVGSFIIFMLWLNVGSFLLLLGICLNATGDELKGRK 287
>gi|318058337|ref|ZP_07977060.1| putative ribonuclease BN [Streptomyces sp. SA3_actG]
gi|318078574|ref|ZP_07985906.1| putative ribonuclease BN [Streptomyces sp. SA3_actF]
Length = 317
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 89/274 (32%), Gaps = 4/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D+ F DG+ A ++L +L+V P ++ L+ L +
Sbjct: 33 WQLVRDSFVRFRYADGFTNARALALQTVLAVIPLVIAFVGLSTSLHTENLGRLAQLTIHS 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + G A+ + + + + NR Y
Sbjct: 93 VAARPSTEVVDEALERGEYAAGDGDEIALWFGAIFSLVNVTTAMCQIERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +++ L A + L + V +A + + + R
Sbjct: 153 RPFHLKYGRGLVMALTAGIPLGLGFVVMIAGGDLAGAATTVYGLGDHARTVWEYARWPVG 212
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L I V P K + G W + L + Y+ ++ T+Y
Sbjct: 213 LLLALIAASVVFRSAPRRKQPGYTWLAFGAGVYLSLWTLLTWLLSLYLRLSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++ M+ L++ Y+ V LG A +
Sbjct: 273 LSAFMSLLLWAYLTSVALFLGLSFAAQLEASRAH 306
>gi|309779255|ref|ZP_07674018.1| serum resistance protein [Ralstonia sp. 5_7_47FAA]
gi|308922059|gb|EFP67693.1| serum resistance protein [Ralstonia sp. 5_7_47FAA]
Length = 337
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 101/288 (35%), Gaps = 10/288 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 9 RALLKRSAQVLIGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRA 119
+ + G A + + + ++A+ ++ L+ SL+
Sbjct: 69 EIFGQIEGLVGAQGASAVEAVLAATRRSGSGLFAAVTAVVLLLAGATTAFSELKDSLDEL 128
Query: 120 YRVVEMRSW-YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN------ 172
+ V + L S + L + V + + ALA V +F+ AL +
Sbjct: 129 WEVPSRQQPGMWGLLRSRLLSFSLILVLAFLLLVSLTVNAALAVVERFWGALWSGSTSSI 188
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L + + + + LP + + G + T + + +G L Y+
Sbjct: 189 ALAAAQVLSSAFSFAVVALLFGTIFKMLPETRVAWRDVALGAVVTALLFTLGKHLIGLYL 248
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 249 GN-SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALQFGSRQ 295
>gi|238756248|ref|ZP_04617565.1| Inner membrane protein yhjD [Yersinia ruckeri ATCC 29473]
gi|238705551|gb|EEP97951.1| Inner membrane protein yhjD [Yersinia ruckeri ATCC 29473]
Length = 338
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/281 (15%), Positives = 97/281 (34%), Gaps = 12/281 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 55 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFATVGFILASNPDLLAELINKIVN 114
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + + A Y + + LR ++ R V R+
Sbjct: 115 SISDPSLAATLKNTVNTAIQQRTTVGLTGLVIALYSGVSWMGNLREAIRAQSRDVWERNP 174
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+YI F + + L+I + A + + + L +
Sbjct: 175 QDVEKFYIRYTRDFISLTGLVLALIITLSLTSIAGSAQSAIVNALGLGGIEWLRPAMTLI 234
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K ++L G + I + + + T + ++ S
Sbjct: 235 ALSISISANYLLFLWIFWILPRHKPPKKALLRGTLIAAIGFEIIKFVMTMMLPRLAS-SP 293
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ Y K P
Sbjct: 294 SGAAFGSVIGLMAFFYFFARLTLYCAAWIAT-AKYKNDKNP 333
>gi|89890230|ref|ZP_01201740.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
gi|89517145|gb|EAS19802.1| ribonuclease BN family [Flavobacteria bacterium BBFL7]
Length = 333
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/285 (14%), Positives = 107/285 (37%), Gaps = 12/285 (4%)
Query: 2 REYFCIVF--DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-F 58
R F + +++++ + + ++D W +++ ++ +L++ +V N+ G + +
Sbjct: 8 RSQFKWIHLPSLLWESAKKWNDDDVWQLSASVAYYTILALPGLLVIMINIVGAVWDTEIA 67
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLN 117
+ + A+ I + I + ++ L++SLN
Sbjct: 68 TGRLTSSLTSLIGYDSAESINGILQAASKDTESWFAKIIGVSTLVFAATGVFYQLQLSLN 127
Query: 118 RAYRVVEMRSWYITRLI-----SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ +++ ++I SFG++L+ ++I + I + ++
Sbjct: 128 KIWKLKINPKTPWWKIITDRVKSFGFILVLGFLILISFILSAIIGILQDWI--QVHIAAY 185
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L + ++ + + +LP A+ K + PG + T I + G L Y
Sbjct: 186 LGKLALLVNYIVSLSIISFLFGLMFRYLPDARLKWKMVWPGALLTGILFETGKFLLEIYF 245
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S+ ++ Y I+ L+++ + GAE + Y
Sbjct: 246 TQ-SSPASAYGAAGLIVLLLLWVSYSSLILFYGAEFIKVYSLRYG 289
>gi|300714722|ref|YP_003739525.1| membrane protein [Erwinia billingiae Eb661]
gi|299060558|emb|CAX57665.1| Predicted membrane protein [Erwinia billingiae Eb661]
Length = 333
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 90/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 48 HFLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTQLINKIVD 107
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 108 NISDPTLASTLKNTVNTAIQQRTTVGLTGLFIALYSGISWMGNLREAIRAQSRDVWERNE 167
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+ F + + L+I + A + + + L +
Sbjct: 168 QDKEKIWRRYSRDFISLTGLVLALIITLSLTSIAGAAQDMIVRALGLEGIDWLKPAMTLI 227
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++LA ++ +++ LP K + ++ G + I + V + T + ++ S
Sbjct: 228 ALSISILANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEVIKFIMTLTLPKLAS-SP 286
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 287 SGAAFGSVLGLMAFFYFFARLTLFCAAWIAT 317
>gi|293393473|ref|ZP_06637784.1| inner membrane protein YhjD [Serratia odorifera DSM 4582]
gi|291424074|gb|EFE97292.1| inner membrane protein YhjD [Serratia odorifera DSM 4582]
Length = 335
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 92/286 (32%), Gaps = 11/286 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ A E F + G + I+ + LS+ P ++ GF+ + +I
Sbjct: 48 WPSIAHLLRATERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELI 107
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + G+ + + + A Y + + LR ++ R V
Sbjct: 108 NKIVGSISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAIRAQSRDV 167
Query: 124 EMRSWYITRLISF--------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
R+ I F L+ ++ + + A + L
Sbjct: 168 WERNPQDQEKIYFKYTRDFISLIGLVVALIITLSLTSIAGSAQAAIVNALGLGDIEWLRP 227
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + ++ A ++ +++ LP K K ++L G + I + V + T +
Sbjct: 228 AMTLIALSISIFANYLLFLWIFWMLPRHKPKKKALLRGTLMAAIGFEVIKFVMTMTLPQV 287
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ S A S++ + F Y + A A+ + P
Sbjct: 288 AK-SPSGAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYKEDKTLP 332
>gi|309808686|ref|ZP_07702577.1| YihY family protein [Lactobacillus iners LactinV 01V1-a]
gi|309810203|ref|ZP_07704048.1| YihY family protein [Lactobacillus iners SPIN 2503V10-D]
gi|312875636|ref|ZP_07735637.1| YihY family protein [Lactobacillus iners LEAF 2053A-b]
gi|315653664|ref|ZP_07906584.1| ribonuclease BN [Lactobacillus iners ATCC 55195]
gi|308168065|gb|EFO70192.1| YihY family protein [Lactobacillus iners LactinV 01V1-a]
gi|308169475|gb|EFO71523.1| YihY family protein [Lactobacillus iners SPIN 2503V10-D]
gi|311088890|gb|EFQ47333.1| YihY family protein [Lactobacillus iners LEAF 2053A-b]
gi|315489026|gb|EFU78668.1| ribonuclease BN [Lactobacillus iners ATCC 55195]
Length = 306
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 107/265 (40%), Gaps = 8/265 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE------MRSWYITR 132
+ +L + G ++ + A + S V ++RI++N+ Y V E +++TR
Sbjct: 79 LPIVKSLLHQQSNGFISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + ++ FV + ++ L + + R +L +
Sbjct: 139 TLMLLLSIFMIYIFLLAIFVVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILF 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+++ +P K PG IFT I W + F Y+ F Y + + + L
Sbjct: 199 NTYINYTIPNISMKSRITFPGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFL 258
Query: 253 VFLYMLGVFFILGAELNASMIIYYW 277
++L + + F++G LNA++ +
Sbjct: 259 MWLNLAAILFLIGVCLNATISYIKY 283
>gi|154496145|ref|ZP_02034841.1| hypothetical protein BACCAP_00429 [Bacteroides capillosus ATCC
29799]
gi|150274700|gb|EDN01764.1| hypothetical protein BACCAP_00429 [Bacteroides capillosus ATCC
29799]
Length = 295
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/271 (16%), Positives = 95/271 (35%), Gaps = 4/271 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + ++ + ++ A+ ++ +L+ FP ++ G L ++ +
Sbjct: 12 RFIREMVDMYFSKNVSRSAAELAYFLILTFFPVLICVNGFVGLLKLDPVA--LLSGIEEF 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + + + + + A + +S AL ++ Y +
Sbjct: 70 LPRGTLDVVAEYVGYISTNQSTAMLVAGLSATLFSASAAFRALMNIMSDIYE-RRTYTGI 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-IWNGRIYATMLA 188
S + +L VT+ + V V V FF L R
Sbjct: 129 FQITASVLFSVLFLVTIYLSLVVVVTGSWLFDLVEDFFHLNPGDLPWDWQWLRFPILFCL 188
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++ V+ +L G I + V ++LF+ +I S YS +Y L S+
Sbjct: 189 VLLFVLLVYRMSAPRGKPRPPLLTGAILASAALVASSILFSWFIGLSSRYSLVYGSLTSV 248
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++LY+ G ILG N +
Sbjct: 249 VILLLWLYLCGNILILGNVFNCVWYRRKKVR 279
>gi|134095695|ref|YP_001100770.1| ribonuclease [Herminiimonas arsenicoxydans]
gi|133739598|emb|CAL62649.1| Putative ribonuclease BN [Herminiimonas arsenicoxydans]
Length = 313
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 39/278 (14%), Positives = 97/278 (34%), Gaps = 5/278 (1%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
+ + ++ ++ + + G + + ++ L S+ P ++ +AG GA +
Sbjct: 13 VWRRIRIVVVCSMMEWFAQRGGSKGAAVAFYTLFSMAPILILAIAIAGAVFGAQAARGEI 72
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ G A+ I + I+ + ++ L+ SL+ +
Sbjct: 73 FAQLSGLVGPNGAQAIEMLLANAHNPHTGVTATLIATIILLVGATTIFAELKDSLDEIWH 132
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWN 179
V + R ++ + V ++ + I A + + + + I+
Sbjct: 133 VPKARESGWLEVLRVRLLSFGLVLVLAFLLLVSLIISAALALLERYWGGLWQDASFILTP 192
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L + ++ LP K + G + T ++ G L Y+ S +
Sbjct: 193 ASNIISYLVIACLFAVIYKTLPQVKLSWHDVAIGSLGTAALFIFGKYLIGVYLGN-SGVA 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ Y S++ L+++Y F LGA +++
Sbjct: 252 SSYGAAGSLVALLLWVYYSAQIFFLGASFTRQYALWFG 289
>gi|312278870|gb|ADQ63527.1| Ribonuclease BN-like family enzyme [Streptococcus thermophilus
ND03]
Length = 315
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 114/276 (41%), Gaps = 7/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + H+ + + ++ +L+VFP IV AN+ +L ++ +
Sbjct: 10 WRPFQVYLSHYRSAEIDISSIAVAYYLILTVFPLIVIAANVFPYLNIDTT--DLLKFMNE 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P+ P + + + + P+ L +++L + + +L+ ++++ Y E R
Sbjct: 68 HLPKHFYAPAANVVQDIFSTPSGRLLGVASLTGFWTMIKSLSSLQKAIDKVYGASEHRDV 127
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+I+ +I L+ L + I L + + +P NL +I N ++
Sbjct: 128 FISHIIGGLLSLVILFLLTFALMLSTIIQSVLRVINQTYPIGSNLTQLILNSIQPLSVAV 187
Query: 189 LFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+F+G++ ++ LP K + I I+PG IFT + + LF Y++ + S
Sbjct: 188 VFLGMMVLYFILPNVKIRKIRYIMPGTIFTTLVIGYLSNLFGTYVIHTLSRLIDIKLFGS 247
Query: 248 IM----TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
IM +++ L I GA NA+ +
Sbjct: 248 IMIFIFIFMLWFIFLARILIFGAVFNATYQELKQGE 283
>gi|68536778|ref|YP_251483.1| hypothetical protein jk1688 [Corynebacterium jeikeium K411]
gi|68264377|emb|CAI37865.1| putative membrane protein [Corynebacterium jeikeium K411]
Length = 360
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 104/282 (36%), Gaps = 8/282 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
D + + + E+ G A+ I+ +++++FP ++ + + G + + V+
Sbjct: 34 WPWLDHVLRMQDRYTEQGGNQYAAGITYFSVMTIFPLMMLTLAVLAMILAGNERLLNDVM 93
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D V + + I Q + K +F+I L A + + LR+ ++ ++V
Sbjct: 94 DKVANMGDGNMGGVLQTIIEQSIE-QRKSVFSIGLLLALWTGLGWMAHLRLGVSEMWKVD 152
Query: 124 EMRS-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWN 179
+ + ++ ++ V+L+ + L L ++ I +
Sbjct: 153 GKPAGFVSGKVKDLIGLIGLLVSLIAAFAITTIGNSGLTTQLLDAVGLADVPGIRYITFA 212
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++A F ++ L+LP K S + I + + V T + + +
Sbjct: 213 VALLVALIANFCVFFWMILYLPRTKVPRRSAVKAAIIGAVLFEVFKQFATVFFSNALS-N 271
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A ++ +V +Y + + + A+ +P
Sbjct: 272 PAGAAFGPVIGVMVLMYFIWRILLYCSAWAATTPESLANLRP 313
>gi|32474234|ref|NP_867228.1| ribonuclease BN [Rhodopirellula baltica SH 1]
gi|32444772|emb|CAD74773.1| probable ribonuclease BN [Rhodopirellula baltica SH 1]
Length = 577
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 7/189 (3%)
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ L Y + +A NR + R ++ + + + L S L +
Sbjct: 237 ASIGVFGLLLFIYAAVALADATEYLFNRIFDAPTQRPIHLRVAVHWSIITLGSGLLAL-- 294
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
A V +F LG +W + ++LA ++ L ++ +P + +
Sbjct: 295 -----SLYMSAQVIDWFGNLGAGSGPVWILQHALSLLAAWVLLFLLYALMPNTHVSVRAA 349
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ G + + W F Y+ T Y +Y + I L+++Y+ + + G L
Sbjct: 350 VMGSAVSAVLWEFAKYGFQIYVTTAVPYLELYGSIGVIPLFLLWIYLTWLIVLFGLILTY 409
Query: 271 SMIIYYWRK 279
++ ++
Sbjct: 410 TLQTVRGKE 418
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 20/59 (33%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ +D++ MA+ ++ + S+ P +V G + G V
Sbjct: 23 QHQLRTAWDLVIHCSAQLHRHRAEGMAAELTYRTIFSLIPVVVLGLVMFRVFGGLDDVQ 81
>gi|288920775|ref|ZP_06415075.1| ribonuclease BN [Frankia sp. EUN1f]
gi|288347851|gb|EFC82128.1| ribonuclease BN [Frankia sp. EUN1f]
Length = 367
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/283 (18%), Positives = 102/283 (36%), Gaps = 9/283 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + +A+ LLS+ P ++ G+LG V +V
Sbjct: 76 WGALRLARATVANAWRHRVLGLAAEAGFWQLLSMPPLLLALLGAIGYLGDTLGGDAVDNV 135
Query: 66 VFGAWPEVI--------AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ I Q+L+ + +I L + + S + ++
Sbjct: 136 RQSILGGADNLLTASVVDGTVRPTIDQILSRGRPDVISIGFLLSLWTGSTAMATFVNTIT 195
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
AY ++RS +RL++ + T VI+ V P L+ + + ++
Sbjct: 196 IAYGQRDLRSAVRSRLLALWLFMAQVATGVILLPALVLGPSLLSDLLD-AGRHPAVDELL 254
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + L ++ + LPG W+VG+ L Y+ +
Sbjct: 255 RDVFWPVVGVVALAMLTTLYHLALPQRRPWRRALPGAALALFLWLVGSYLLRMYLELVFS 314
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y LA+ + L+F Y+ + +LGAELNA++ R +
Sbjct: 315 NELVYGSLAAPVAALLFFYITALAVLLGAELNAALDERPPRPR 357
>gi|327539624|gb|EGF26232.1| Ribonuclease BN [Rhodopirellula baltica WH47]
Length = 603
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 69/189 (36%), Gaps = 7/189 (3%)
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ L Y + +A NR + R ++ + + + L S L +
Sbjct: 263 ASIGVFGLLLFIYAAVALADATEYLFNRIFDAPTQRPIHLRVAVHWSIITLGSGLLAL-- 320
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
A V +F LG +W + ++LA ++ L ++ +P + +
Sbjct: 321 -----SLYMSAQVIDWFGNLGAGSGPVWILQHALSLLAAWVLLFLLYALMPNTHVSVRAA 375
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ G + + W F Y+ T Y +Y + I L+++Y+ + + G L
Sbjct: 376 VMGSAVSAVLWEFAKYGFQIYVTTAVPYLELYGSIGVIPLFLLWIYLTWLIVLFGLILTY 435
Query: 271 SMIIYYWRK 279
++ ++
Sbjct: 436 TLQTVRGKE 444
Score = 40.4 bits (93), Expect = 0.27, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 20/59 (33%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ +D++ MA+ ++ + S+ P +V G + G V
Sbjct: 49 QHQLRTAWDLVIHCSAQLHRHRAEGMAAELTYRTIFSLIPVVVLGLVMFRVFGGLDDVQ 107
>gi|300857884|ref|YP_003782867.1| hypothetical protein cpfrc_00467 [Corynebacterium
pseudotuberculosis FRC41]
gi|300685338|gb|ADK28260.1| putative membrane protein [Corynebacterium pseudotuberculosis
FRC41]
Length = 361
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 97/272 (35%), Gaps = 8/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVI 63
FD I E + EE G ++ I+ ++LS+FP ++ +A + +
Sbjct: 38 WSWFDHIMRMNERYGEEGGNQYSAGITYFSVLSMFPLLMLIMAIAASMLAQRPDLLAQLQ 97
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + IA+ +T + + +F I L A + + LR ++ +
Sbjct: 98 EKIVASVDGSIAETLTKILDTAI-AQRGAMFGIGGLTALWSGLGWMSNLRYGASKMWCYP 156
Query: 124 EM-RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKFFPALGNLLLIIWN 179
+++ +L ++ ++ V L V + + L+ +
Sbjct: 157 VTGENFFKAKLQDLLGLVGLIFAFMVAFGVTAIGSSGLTERLLVVVSLDKVPGIFLLTFA 216
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I ++A F +++ +LP + + S + I + + V L + +
Sbjct: 217 VSILLGLIANFCVFLWMLKYLPRGEVPMKSAVRASIIGAVLFEVFKQLAAQFFSNALN-N 275
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V Y + + + A+
Sbjct: 276 PAGATFGPIIGVMVLFYFVWRILMYCSAWAAT 307
>gi|290956470|ref|YP_003487652.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260645996|emb|CBG69087.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 347
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 108/277 (38%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ D + +E +A+ + LLSV P ++ L G++ T+ +
Sbjct: 5 RTAWLLLKDTVNSCIEYRILGLAAEAAFFTLLSVPPLLLSMIGLLGYVDDWTGADTIASL 64
Query: 66 VFGAWPEVI--------AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
A+ + V+ + +I L A + S V ++
Sbjct: 65 ELNLLEASRTVLSEKGVAQIAQPILDDVMKGGRPDVISIGFLFALWSGSRAVNVFIDTIT 124
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + +R TRL++F L+A + I + VA P A+ + + ++
Sbjct: 125 VMYGLDGVRGIVKTRLMAFLLFLVALLIGSIALPLMVAGPDAVVRIVPW------SATVV 178
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ + L ++ +S + +PG + WV+G+ L Y+
Sbjct: 179 QVLYWPVVIVLSIVFLTTLYHVSVPVRSPWVEDVPGALVALGMWVLGSFLLRIYLTNTVE 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 239 GATIYGSLAAAVAVLLWIGVGAFAVLVGAAVNAAIDR 275
>gi|213964986|ref|ZP_03393185.1| putative ribonuclease [Corynebacterium amycolatum SK46]
gi|213952522|gb|EEB63905.1| putative ribonuclease [Corynebacterium amycolatum SK46]
Length = 341
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 99/281 (35%), Gaps = 8/281 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD + E + E+ G A+ ++ ++LS+FP I+ + + G Q + +
Sbjct: 35 WAWFDHVMRMQERYSEQGGNFFAAAVTYFSVLSIFPLIMTAFAILALVLRGNDQLLEQIQ 94
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS----LNRA 119
+ + + I I + A G+FT+ +A + + L + R
Sbjct: 95 SAITDSIDGSMGDTINAIIEGAID-QAGGVFTVGFIATLWSGLGWMGNLSNAVTQLWKRP 153
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ L+ +L+ V ++ V + + + + +I
Sbjct: 154 LGASNFVMGKVRDLLRLLGMLVMIVLTFAVTAVGSSGLTQSLLDKVGLADIPGITIIAGL 213
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I +LA ++ ++ FLP + + S G I I + V L + + + +
Sbjct: 214 IAIAVGLLANWLLFFWMLAFLPRGGAPLRSAAKGAIIGAIGFEVVKQLGSVFFSNALS-N 272
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A ++ +V Y++ + A+ +K
Sbjct: 273 PAGAVFGPVIGLMVVFYLIWRITMYATAWTATTEEALADEK 313
>gi|29827601|ref|NP_822235.1| ribonuclease BN [Streptomyces avermitilis MA-4680]
gi|29604701|dbj|BAC68770.1| putative ribonuclease BN [Streptomyces avermitilis MA-4680]
Length = 319
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 85/274 (31%), Gaps = 6/274 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++ D+ F DG++ A + +L + PF + +A + V +
Sbjct: 33 LRLLVDSFARFRYADGFSHARALGFQVVLGMVPFTIALVGVATTVHTESVGQIVELTLAR 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-----FTISALAAAYFSSNGVEALRISLNRAYRVV 123
P A + D + L + A ++ + + NR Y V
Sbjct: 93 IVPGASADVVKDALAGTRRTAHASLWSTVALWVGLAFAVLNLASAMGQVERGANRIYGVE 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R S L A V +V+ V VA V + F L +
Sbjct: 153 QDRPALHKYGRSVLLALAAGVPMVLGFLVLVAGRAVGESVVEAFGWSHGRLDWWGPLEVP 212
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+I + + P + G + WV L Y+ ++ +Y
Sbjct: 213 LGAALAWIASAVILRWSPRRVQPGYTWLAFGSAVHLVLWVGATWLLALYVAKSGSFGALY 272
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + + L++ + GV LG A +
Sbjct: 273 GPLTAFVALLLWANLTGVALFLGIAFAAQLEAAR 306
>gi|110833134|ref|YP_691993.1| ribonuclease BN family protein [Alcanivorax borkumensis SK2]
gi|110646245|emb|CAL15721.1| ribonuclease BN family protein [Alcanivorax borkumensis SK2]
Length = 309
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 36/274 (13%), Positives = 98/274 (35%), Gaps = 6/274 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
M++ F F I+ ++ ++E + + A ++ L S+ P I+ + + + +
Sbjct: 7 MKDSFLYWFSILKRSVTLWLEGNAVSYAGSLAFFTLFSLAPVIILAVKVISLVMTSDAAM 66
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + A + + I +S L ++ ++ S+N
Sbjct: 67 AEILGQLEATIGPEAANEVRNAIANTQTPRQGLLAGLLSLLVMVIGATTVFAQMQRSMNA 126
Query: 119 AYRVVEMRSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ V+ S + + ++ + + A + L
Sbjct: 127 IWEVMPRPSRNTIAALIKSRLLSLTVVVSLGFVLLVSLLLNVVVQAIIVYAEGWLPIHSS 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + +++ + + + LP +++P + T I + VG L Y+
Sbjct: 187 VVVIFEMTVSLVVIGLLFGTMFRVLPDVVLNWKAVMPAALITAILFSVGRALIGLYLAHT 246
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+T ++ Y S++ L+++Y + + GA
Sbjct: 247 AT-ASTYGAAGSLVVLLMWVYFSSMILLFGAAFT 279
>gi|304397978|ref|ZP_07379854.1| ribonuclease [Pantoea sp. aB]
gi|304354689|gb|EFM19060.1| ribonuclease [Pantoea sp. aB]
Length = 339
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 91/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A++ F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 49 HFIRALDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTDIINKIVS 108
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + L A Y N + LR ++ R V R
Sbjct: 109 SISDPTLATTLKNTVNTAIQQRATVGITGLLLALYSGLNWMGNLREAIRAQSRDVWERKP 168
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+ + + + LVI + A A + + L +
Sbjct: 169 DDKEKIWKRYIRDLLSLAGLMLALVITLSLTSVAGSAQASIVSALGLDGIDWLRPALTII 228
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++A ++ +++ LP K + ++ G + I + V + T + +T S
Sbjct: 229 ATSISVMANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEVIKFVMTLTLPKMAT-SP 287
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 288 SGAAFGSVLGLMAFFYFFARLTLFCAAWIAT 318
>gi|329940264|ref|ZP_08289546.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329301090|gb|EGG44986.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 382
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/277 (17%), Positives = 108/277 (38%), Gaps = 14/277 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ D + +E +A+ + LLSV P ++ L G++ T+ +
Sbjct: 29 RTAWLLLKDTVNSCMEYRILGLAAEAAFFTLLSVPPLLLSLIGLLGYVDEWTGTDTISSL 88
Query: 66 VFGAWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + V+ + +I L A + S V ++
Sbjct: 89 EDNILEASRTVLSDKGVTEIAQPLLHDVMKGGGPDIISIGFLFALWSGSRAVNVFIDTIT 148
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + R TRL++FG ++A + ++ + VA P A+ V L ++
Sbjct: 149 VMYGLDGTRGIVKTRLLAFGLFVVALLIGSVVLPLTVAGPDAVVNV------LPWSTTVV 202
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ + L ++ +S + +PG + WV+G+ L Y+ +
Sbjct: 203 QALYWPVVVVGSIVFLTTLYQVSVPVRSPWLEDVPGALVALAMWVLGSFLLRIYLTSTVE 262
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 263 GPTIYGSLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 299
>gi|110639914|ref|YP_680124.1| ribonuclease [Cytophaga hutchinsonii ATCC 33406]
gi|110282595|gb|ABG60781.1| probable ribonuclease [Cytophaga hutchinsonii ATCC 33406]
Length = 299
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 98/284 (34%), Gaps = 10/284 (3%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTV 62
Y ++ + + + D + ++ I+ A+ S+ +V + G+ + V +
Sbjct: 4 YLKDFPGLLKTTFKEWNKRDPFRQSAVIAYYAIFSMPGLLVLIVTIMGYFFSRDVVSQNI 63
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYR 121
I + + +AK +L L I ++ AL+ +LN +
Sbjct: 64 IHQIASTFGAEVAKQTELMLLNAGKTKETILGSIIGVATLLVGATGVFVALQKTLNEIWE 123
Query: 122 VVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V RL SFG +L + L+I V A+ +++ + +
Sbjct: 124 VEITNKKGILPMLKNRLFSFGLILAIAFLLLISLVVSTALSAVGEWIQSDMSEI--FIAF 181
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+++ + + LP + G I T I + +G Y +
Sbjct: 182 FNIINFTVSLIIISFLFALIFRILPDVHITWKQVWLGAILTGILFTIGKTAIGFYFGK-A 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
T + Y SI+ L+++ + GAE + Y+ K
Sbjct: 241 TPESAYGAGGSIVLLLLWVSYSSMILFFGAEFTHTFTKKYFPVK 284
>gi|291437678|ref|ZP_06577068.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291340573|gb|EFE67529.1| membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 356
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 93/269 (34%), Gaps = 8/269 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + E +A+ ++ ++ +++FP + A + T+ D
Sbjct: 70 RLMLTHAWRSYERLDRVHWTRLAAAMTFTSFVALFPLLTVAAAIGAATLGQDRQETLQDA 129
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-E 124
+ P + + +++Q A + I+ + + R L + + E
Sbjct: 130 ITDQVPGISDELNVGDLVQ----NAGTVGLIAGTVLLFTGIRWAGSTRECLRAVWELPDE 185
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGRI 182
+ ++ R G ++ L++ + + G +++
Sbjct: 186 EENPFLRRGKDAGVLVGLGGALLVTLAASTVASALVGRISDAIGLEKGGWGGVVLRIAAF 245
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ A F+ L++V LP + +L I + + + +L + Y+ + S MY
Sbjct: 246 AVAVGADFLLLLYVLTLLPGVEPTRHRLLVAAITGAVGFELLKLLLSGYMQGVAAKS-MY 304
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 305 GAFGVPVALLLWINFTAKLVLFCAAWTAT 333
>gi|153853728|ref|ZP_01995084.1| hypothetical protein DORLON_01075 [Dorea longicatena DSM 13814]
gi|149753478|gb|EDM63409.1| hypothetical protein DORLON_01075 [Dorea longicatena DSM 13814]
Length = 274
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/223 (22%), Positives = 103/223 (46%), Gaps = 1/223 (0%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
V+ V +P+ + IT + QV + G+ +++ + A + + GV AL
Sbjct: 53 PVTKADVMTAVLQVFPKSVDSLITSIVNQVY-NQSGGIISLTIIVALWSAGKGVLALTTG 111
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
LN Y E R++ I R+ + Y + + ++ + + V +V + +P + +
Sbjct: 112 LNCVYDCKETRNYIILRIRATFYTVAFIIVIIFLLVLSVFGNTLNLFVTEHYPLMERFVD 171
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I R T + LF+ + ++ FLP ++ L G F+ + W++ + +F+ Y+ F
Sbjct: 172 QIMQIRGIITPVLLFVFTMMIYKFLPNHIVQLKVQLMGAAFSAVGWMIVSWIFSVYLNIF 231
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+S+MY L +I+ +++LY +LG E+N +
Sbjct: 232 KGFSSMYGSLTTIVLIMLWLYFCMYILLLGGEVNVILRDMEQE 274
>gi|317506481|ref|ZP_07964282.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
gi|316255242|gb|EFV14511.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
Length = 345
Score = 106 bits (265), Expect = 3e-21, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 108/280 (38%), Gaps = 9/280 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPT 61
++ A+ E +A ++ + +LS+ P + G++
Sbjct: 20 LRVVTRALAMSWEHSIFAESAGAAFWQILSLPPMFLGLLGTLGYVSPWFGPGVLEDVQHK 79
Query: 62 VIDVVFGAWPEVIA-KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ A + + + I ++ V A + + ++S + + + S+ + A S+ RA+
Sbjct: 80 ILAFAQQALSQQLVNEVIRPTLMAVTAHGREEVTSLSFVLSLWAGSSAISAFVDSIVRAH 139
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E+R R+ + G ++ + + P + L +
Sbjct: 140 NQTELRHPVRQRIFALGLYIVFLACAMFALPLLSVTPHEVTTRLPQETHPV-LSSAYNDL 198
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + + L + + ++PG + + ++VG Y+ ++
Sbjct: 199 YGPALFVGVTLFLSWFYRIALPVPPSWWRLVPGAVLAVLFFLVGRSGLLWYLNWVTSTGY 258
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA+ + L+ + +G+ ILGAELN+++ ++ +K
Sbjct: 259 TYGALATPIAMLLLAFFIGMSVILGAELNSAIEHFWPTRK 298
>gi|302537623|ref|ZP_07289965.1| integral membrane protein [Streptomyces sp. C]
gi|302446518|gb|EFL18334.1| integral membrane protein [Streptomyces sp. C]
Length = 374
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 101/274 (36%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P + L G++ +V +
Sbjct: 35 WLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLFLGLLGLLGYVDGWTNTQSVASIEEN 94
Query: 69 AWPE--------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + V + L ++ A + S V ++ Y
Sbjct: 95 ILRAVGTVLSDRGVNDIARPMLDDVTSRGRPDLISLGFAFALWSGSRAVNVFIDTITVMY 154
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + I+ + V P A+ + + +I
Sbjct: 155 GLDGHRGIVKTRLLAFLLYVIALLIGAIVLPLMVVGPDAVVRLVPW------STEVIAVL 208
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L L ++ +S + +PG + WV+G+ L Y+ T
Sbjct: 209 YWPVVTLLSIAFLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRIYLTNTVEGPT 268
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 269 IYGSLAAPVAILLWIGISAFAVLVGAAVNAAIDR 302
>gi|157372976|ref|YP_001480965.1| putative ribonuclease [Serratia proteamaculans 568]
gi|157324740|gb|ABV43837.1| putative ribonuclease [Serratia proteamaculans 568]
Length = 339
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 93/286 (32%), Gaps = 11/286 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ A E F + G + I+ + LS+ P ++ GF+ + +I
Sbjct: 48 WPSIAHLLRATERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTELI 107
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + G+ + + + A Y + + LR ++ R V
Sbjct: 108 NKIVGSISDPTLASTLKNTVNTAIQQRTTVGLTGLALALYSGISWMGNLREAIRAQSRDV 167
Query: 124 EMRSWYITRLISFGYV--------LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
R+ I F Y L+ ++ + + A + L
Sbjct: 168 WERNPQDQEKIYFKYTRDFISLSGLVVALIITLTLTSIAGSAQAAIVRALGLEGIEWLRP 227
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + ++ A ++ +++ LP K K ++L G + I + V + T +
Sbjct: 228 AMTLIALSISIFANYLLFLWIFWMLPRHKPKKKALLRGTLLAAIGFEVIKFVMTMTLPQV 287
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ S A S++ + F Y + A A+ + P
Sbjct: 288 AK-SPSGAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYKEDKTLP 332
>gi|153808202|ref|ZP_01960870.1| hypothetical protein BACCAC_02488 [Bacteroides caccae ATCC 43185]
gi|149129105|gb|EDM20321.1| hypothetical protein BACCAC_02488 [Bacteroides caccae ATCC 43185]
Length = 319
Score = 106 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 98/282 (34%), Gaps = 6/282 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + II D + F++++ +++ ++ + L S+ P + + G L F
Sbjct: 17 KKKLSVSIKIIKDTFQGFIDDNVMRLSASLAYATLFSIIPLLSLLVTI-GVLLNIDFTNQ 75
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + + + IS + ++ ++ SLN +
Sbjct: 76 LYAQLEPIVGSKVIDALQAIMENAETTDSFSFATIISIGVTIFGATTVFAEIQSSLNTIW 135
Query: 121 RVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LII 177
+ +SW + + I+ F L KF ++ ++
Sbjct: 136 GIKAVPKKSWLKYIINRLLSFSVILAFAFILLITFTITNLITDISNKFITNNPDIAESLV 195
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + + + LP AK K ++ G + T + ++G + YI F+
Sbjct: 196 KTIGMIINIGVTTVIFTLIFKILPDAKIKSKDVIIGALVTTVLLLIGQWGISFYIG-FAN 254
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T+Y A + + ++Y + GAE + K
Sbjct: 255 IETVYGAAAFMAIFITWIYYSAIIIYTGAEFTKAWANELGGK 296
>gi|320354895|ref|YP_004196234.1| ribonuclease BN [Desulfobulbus propionicus DSM 2032]
gi|320123397|gb|ADW18943.1| ribonuclease BN [Desulfobulbus propionicus DSM 2032]
Length = 473
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 102/313 (32%), Gaps = 39/313 (12%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F + ++ + F+ A+ ++ S LLS+ P + ++ LG + + T I
Sbjct: 24 FFRLCARLLLIMHQEFIRTHLALRAAALTYSILLSLVPILALSTSILKGLGNDEQLKTTI 83
Query: 64 DVVFGAWPE-------------------------------------VIAKPITDEILQVL 86
W + + + V
Sbjct: 84 VRFIDQWEPPIRSEGGGDITATSPPSADVTITSGASNDRVPSPISTNLHRAVDLIFQYVD 143
Query: 87 AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
L I + + ++ ++N + + RS + LL + L
Sbjct: 144 RTNFAALGIIGIIGLIGVIFLVLSSIEEAMNAIWHTHKGRSLSRKLMD--YLGLLLLLPL 201
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+ + LA + + + + + + + L+ ++LF P K
Sbjct: 202 SLNVALAAEAILANERIMRQLSMIIPSAWMAALFFKLVPFMFIVLTLMIMYLFFPHTKVH 261
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ L G +F W V ++ + + Y+ +Y ASI L++L + F +LGA
Sbjct: 262 SGAALTGALFASFFWFVFQKMYITLQIGVANYNAIYGSFASIPLFLIWLQIGWTFILLGA 321
Query: 267 ELNASMIIYYWRK 279
L ++ + +
Sbjct: 322 SLAYAIQHQHHYR 334
>gi|84496269|ref|ZP_00995123.1| putative integral membrane protein [Janibacter sp. HTCC2649]
gi|84383037|gb|EAP98918.1| putative integral membrane protein [Janibacter sp. HTCC2649]
Length = 381
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 104/274 (37%), Gaps = 14/274 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV------- 62
+ + I + +AS ALLS+ P ++ G++G TV
Sbjct: 23 RLTVETIRICLRYRVTGLASEAGFFALLSLPPLVLGLFGGVGYIGRWLGQDTVATVREAI 82
Query: 63 -IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+VI+ + + V L ++ + + + S + L +++ Y
Sbjct: 83 TEYAARFLTDDVISSTLAPTVDDVFTAGRFDLISVGFVLSLWSGSRALNVLVDTVSIMYG 142
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+R TR++SF ++A V +I + + P L V L + +
Sbjct: 143 QSGVRGIVPTRVLSFSLYIVALVVGIITIPLVLIGPTLLGEV------LPDTWDFLTFLY 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L + ++ +S +PG + T + WVV + I +++
Sbjct: 197 WPVVSLVVIAAFTSLYHVSTPLRSPWTRDIPGAVLTLLIWVVASFAVRGSIAASLGGTSI 256
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y L++ + L++LYML + ++GA LNA +
Sbjct: 257 YGPLSAPIVLLIWLYMLAIAVLIGAALNAGIRNL 290
>gi|299138188|ref|ZP_07031368.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
gi|298600118|gb|EFI56276.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
Length = 330
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/292 (17%), Positives = 109/292 (37%), Gaps = 21/292 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ +E D +A + SA++++FP ++ A + L + + + F
Sbjct: 30 LLRATFAASIEHDVLTLAQATAYSAMVTLFPGLIVAAAIVTLLPDTMPLRFQMALFFDRV 89
Query: 71 PEVIAKPITDEI--LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-S 127
P+ D S L + ++N + L RA+ + + S
Sbjct: 90 LPSNVSPLLDAYFATTQKNQQTAQALLGSLLVSITGAANVMVTLMEGFRRAHNLPLPKAS 149
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII--WNGRIYAT 185
++ R+ + V L+ V + S + V L ++ P ++L+ I + R
Sbjct: 150 FWPRRIRALVLVPLSLVPMAAASALVVFGHLITHWLAGELPPGEHVLVYILAFTLRWAIA 209
Query: 186 MLALFIGLIFVHLFLPAAKSK----------------IMSILPGVIFTWISWVVGAVLFT 229
+ + ++ + LPG + + W V ++F
Sbjct: 210 LAGSVGIIAVIYHLGTDVSRHMRQHVEYWLALRMDWSWRASLPGAMVATLLWFVSTLIFG 269
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y+ F+ YS +Y L + + + +LY++ + + GAE NA ++ + P
Sbjct: 270 LYVTRFANYSRVYGSLGAAIALMFWLYIIALCVLAGAEFNAQLVAHRRNSDP 321
>gi|226365710|ref|YP_002783493.1| ribonuclease [Rhodococcus opacus B4]
gi|226244200|dbj|BAH54548.1| putative ribonuclease [Rhodococcus opacus B4]
Length = 340
Score = 106 bits (264), Expect = 4e-21, Method: Composition-based stats.
Identities = 37/276 (13%), Positives = 94/276 (34%), Gaps = 8/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
+ FD + A + + + G A+ I+ ++L++ P ++ +AGF+ G + +
Sbjct: 11 QRAARPWFDHLMRAAQRYQNQKGDYYAAGITYFSVLALIPILMVAFAIAGFVLAGQPELL 70
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ D + P + + I + + + L AAY + LR +L
Sbjct: 71 QELQDGITKNVPGSLGDTLNTIIDSAI-ASRASVGVLGLLGAAYAGLGWMANLRDALTAM 129
Query: 120 YRVVEMRSWYIT----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ ++ ++ + LA + + S + + + +
Sbjct: 130 WESQRESKGFVRTKLGDAVALLGLGLAMIVSIGSSALSSGPVARTVVEVLNLDDVTGVDI 189
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ +++A + +V LP S + + + + + + Y+
Sbjct: 190 GLRALSTVLSLVATWAVFAWVIARLPREPVTFRSAIKAALLAAVVFEIFKQVGAIYLTAV 249
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ I+ LVF+Y+ + A+
Sbjct: 250 TA-GPAGVAFGPIIGLLVFIYLTSRMLLFSTAWAAT 284
>gi|169823942|ref|YP_001691553.1| putative ribonuclease [Finegoldia magna ATCC 29328]
gi|302380011|ref|ZP_07268490.1| YihY family protein [Finegoldia magna ACS-171-V-Col3]
gi|303234370|ref|ZP_07321009.1| YihY family protein [Finegoldia magna BVS033A4]
gi|167830747|dbj|BAG07663.1| putative ribonuclease [Finegoldia magna ATCC 29328]
gi|302312237|gb|EFK94239.1| YihY family protein [Finegoldia magna ACS-171-V-Col3]
gi|302494486|gb|EFL54253.1| YihY family protein [Finegoldia magna BVS033A4]
Length = 284
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 107/271 (39%), Gaps = 8/271 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ ++ +++ + ++S+ PF++ N+ + A + +I
Sbjct: 12 FFKKLLQSIKDDQIPLLSAQTTYHFIMSLVPFLIVLLNIVLMVAASKI--DLIFKSMEVL 69
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + ++ + + +IS L A + SS +++L ++N+A+ V +
Sbjct: 70 PDETRNILMTLVNTIINNRSSSVLSISLLVALWSSSKALKSLITAMNKAFDVRSENGFLK 129
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
T+L S + ++ + L++ L L + ++ R ++++
Sbjct: 130 TQLKSILFTVVLLLLLMVTLVFIAFGGLILNLIEQYMKIRIPYFA--QIFRYLIPIVSMI 187
Query: 191 IGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
G ++ F P K S + G I W++ +L++ Y+ S S Y L
Sbjct: 188 FGFTLLYKFAPDFDSTRSIKWKSAMLGGTIATIGWLLITLLYSFYVSNISNMSLTYGPLV 247
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ V++ + ++ AE+ A+
Sbjct: 248 GVFALFVWINLSSQIILISAEITANYDQVKK 278
>gi|302205611|gb|ADL09953.1| Putative ribonuclease, membrane protein [Corynebacterium
pseudotuberculosis C231]
gi|302330164|gb|ADL20358.1| ribonuclease [Corynebacterium pseudotuberculosis 1002]
gi|308275847|gb|ADO25746.1| ribonuclease [Corynebacterium pseudotuberculosis I19]
Length = 361
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 97/272 (35%), Gaps = 8/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVI 63
FD I E + +E G ++ I+ ++LS+FP ++ +A + +
Sbjct: 38 WSWFDHIMRMNERYGKEGGNQYSAGITYFSVLSMFPLLMLIMAIAASMLAQRPDLLAQLQ 97
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + IA+ +T + + +F I L A + + LR ++ +
Sbjct: 98 EKIVASVDGSIAETLTKILDTAI-AQRGAMFGIGGLTALWSGLGWMSNLRYGASKMWCYP 156
Query: 124 EM-RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKFFPALGNLLLIIWN 179
+++ +L ++ ++ V L V + + L+ +
Sbjct: 157 VTGENFFKAKLQDLLGLVGLIFAFMVAFGVTAIGSSGLTERLLVVVSLDKVPGIFLLTFA 216
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I ++A F +++ +LP + + S + I + + V L + +
Sbjct: 217 VSILLGLIANFCVFLWMLKYLPRGEVPMKSAVRASIIGAVLFEVFKQLAAQFFSNALN-N 275
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V Y + + + A+
Sbjct: 276 PAGATFGPIIGVMVLFYFVWRILMYCSAWAAT 307
>gi|322377322|ref|ZP_08051813.1| putative ribonuclease BN [Streptococcus sp. M334]
gi|321281522|gb|EFX58531.1| putative ribonuclease BN [Streptococcus sp. M334]
Length = 291
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 126/281 (44%), Gaps = 7/281 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 6 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 63
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + VV PE I + + I +VL P+ GL + + L+A + S + L+ + N+
Sbjct: 64 VSNFLKVVNEFLPETIYDVVANIITEVLTQPSTGLLSFAVLSALWTFSKSMNFLQKAFNK 123
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R ++L+S + + F+ V + L ++ ++ + L +
Sbjct: 124 AYGVAKNRGMISSQLMSLFVSFGLQILFALALFLSVFGRMLLNLIKSYWKSDSPLFDYLQ 183
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +F L+ ++ FLP + S+LPG F ++ V+ +F+ Y+ +
Sbjct: 184 DLTGPLVYALIFAILVMLYYFLPNVTVRRIRSVLPGSAFVMLTLVLLLNIFSVYVNNYVN 243
Query: 238 YSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYY 276
+ +SI+ + + ++ I+GA +NAS+
Sbjct: 244 HIVDVRFFSSIVVVVMMFWFILIAKILIVGAVINASVQSLK 284
>gi|262202456|ref|YP_003273664.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085803|gb|ACY21771.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 337
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 19/261 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
F ++ G +A+ I+ +S+FP ++ ++ G + + ++D P
Sbjct: 23 VAYKFFDDQGGYLAALITYYGFISLFPLLLVFTSVLGLVLEDNPELQERIVDSALSQIP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I D++ Q + L I ++A Y + A++ ++N + V
Sbjct: 82 ----VIGDQLGQPGQLSGSTLAVVIGVVSAVYGALGVSVAIQNAMNIVWTVPRNERPNPI 137
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ G +LLA+V LVI+ + A + T+L
Sbjct: 138 QVRVKGALLLATVGLVIIGLTALNGVSAAIDLGSDG----------RVLATVGTLLLYIA 187
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLASIMT 250
+F F A I +LPG + + W + T +I + S A ++
Sbjct: 188 VFVFGFRFGTARDVSIRDVLPGAVGAAVGWQILQTFGTVFIQRVIANSSATTGVFAVVLG 247
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L FLY+ V ++ E NA
Sbjct: 248 LLAFLYIAAVMVVICLECNAV 268
>gi|222480768|ref|YP_002567005.1| ribonuclease BN [Halorubrum lacusprofundi ATCC 49239]
gi|222453670|gb|ACM57935.1| ribonuclease BN [Halorubrum lacusprofundi ATCC 49239]
Length = 437
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 35/254 (13%), Positives = 80/254 (31%), Gaps = 15/254 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + D + ++ ++ +A+ I+ A +S+ P ++ +A +
Sbjct: 1 MPTHSLASIDTVRRVVDVAIDRQVTFLAAAIAYYAFVSLIPALLLLVVVATAVFGEAIAV 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + + I A G I + + L + Y
Sbjct: 61 ELLAAAGDFLTPAGQEAVAGAISS--AGGRTGASVIGVAVLLWSTLKVFRGLDTAFAELY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V E + + VL SV + +M + F A +++ +
Sbjct: 119 GVKEPPDFVKQLADAASVVLAVSVGIGVMVAI------------GAFVAAADVVPAVEAA 166
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I L + + ++ LP + LPG + W + F Y + +
Sbjct: 167 SILVLPAFLAVVFLPMYYLLPEPDIGLREALPGAAIAAVGWTLLQAGFQVYAASAGQF-Q 225
Query: 241 MYAGLASIMTCLVF 254
+Y + I+ + +
Sbjct: 226 VYGVIGGILLLVTW 239
>gi|332520817|ref|ZP_08397277.1| ribonuclease BN [Lacinutrix algicola 5H-3-7-4]
gi|332043347|gb|EGI79543.1| ribonuclease BN [Lacinutrix algicola 5H-3-7-4]
Length = 332
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/280 (16%), Positives = 106/280 (37%), Gaps = 8/280 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+++++ + + A AS I+ S ++FPF++F + ++ F + +
Sbjct: 49 LYNLLELYVIGIAKGALTARASAIAYSFFTALFPFLLFIIIVIPYIPVPDFENDFLHFLE 108
Query: 68 GAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P + +D I + GL + + A + +NGV AL +Y
Sbjct: 109 SVLPPTTSDFFSDGIFETLKGKNTNSGLLSTVLILAVFLMTNGVNALFSGFENSYHEQLT 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG------NLLLIIWN 179
R+ + + G L+ S L+ V + + +
Sbjct: 169 RNVVKQYVFALGVALILSFLLITTVAVLGYFQIYVVDNILVWLDDYGYDTRRETDFWANL 228
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ ++ ++ F G +FT + ++ + LF YI F+ Y+
Sbjct: 229 AQYAFFVVMTYLATATLYYFGTKEGRHAKFFSVGALFTTLLIMLTSYLFGLYIENFARYN 288
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y + +++ L +L++ +LG ELN S++ +
Sbjct: 289 ELYGSIGALLILLFYLWLNANILLLGFELNVSLMRLRQKH 328
>gi|154484798|ref|ZP_02027246.1| hypothetical protein EUBVEN_02516 [Eubacterium ventriosum ATCC
27560]
gi|149734646|gb|EDM50563.1| hypothetical protein EUBVEN_02516 [Eubacterium ventriosum ATCC
27560]
Length = 282
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/269 (21%), Positives = 119/269 (44%), Gaps = 2/269 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ YD I+ ++ + S +LS+FPFI+ NL G +Q
Sbjct: 1 MKHKLFNFIKKAYDFIDTIGQDKVGIYTAQASFFIILSIFPFILLFFNLIGHASINQ--N 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T+I ++ P+ + + ++ + +I+A+AA + +S GV ++ L
Sbjct: 59 TIIYLIHSYAPDSLKPLFIQVVSEIYEHVSSTAVSITAIAAIWSASKGVLSVMFGLYEIA 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ + R+++I+R +S Y ++ +V L + V P L + ++
Sbjct: 119 KIHQKRNYFISRFVSMLYTIIFTVALASTMVLLVFGNKLFNLAISLAPWLRQISIVTLML 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R L L + ++ + + PG F+ + WVV + +F+ Y+ +FS S
Sbjct: 179 RYLLVFLLLVLFFSLIYRLANFKLATFGKVFPGAFFSALGWVVFSYIFSIYVDSFSGMSY 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELN 269
MY +++ ++++Y L +GAE+N
Sbjct: 239 MYGSFTAVIVFMLWIYFLIYIMFIGAEIN 267
>gi|307150261|ref|YP_003885645.1| ribonuclease BN [Cyanothece sp. PCC 7822]
gi|306980489|gb|ADN12370.1| ribonuclease BN [Cyanothece sp. PCC 7822]
Length = 304
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 103/291 (35%), Gaps = 18/291 (6%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVID 64
+ ++ + + ++ M + +S +L S+FP ++ ++ F + ++
Sbjct: 13 KIVQLLIRTVLKWQQDQCLEMGAALSYYSLFSLFPTLLVILSIFSFFLGPNTEAYNQILH 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + I + ++ + + G + + +S + L S+N+ ++V +
Sbjct: 73 LAKEGLPSEAFQIIEETLIH-MNQSSVGAGIVGFSILFFSASQAFDVLSRSINKIWQVPQ 131
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL----------- 173
+ + + A + + I L L L
Sbjct: 132 KYHSKRKIITALLNFIQARIFAFTLVLGTAGIILLSLIFNILTKLLLFLLENVAATVNFI 191
Query: 174 ----LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
++ ++ T L + ++ + LP+ K K I G + T S L +
Sbjct: 192 KIDKAFLVAKIQLGTTFFLLLLVVMILFKILPSTKIKWRDIWLGSLLTATSLFFLQQLAS 251
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ ++ T Y + +M L+++Y+ F LG+E + ++
Sbjct: 252 NSVIRIGTRFQYYGVIGGVMVLLLWIYLTCEIFFLGSEFTFIYAQLFGSRR 302
>gi|313676559|ref|YP_004054555.1| ribonuclease bn [Marivirga tractuosa DSM 4126]
gi|312943257|gb|ADR22447.1| ribonuclease BN [Marivirga tractuosa DSM 4126]
Length = 306
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 102/276 (36%), Gaps = 10/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M ++ F I ++ F EE+ + ++ + + S+ + +AG+ V
Sbjct: 1 MAKFLIKWFQIFKNSGIKFFEENPFKHSASTAYFTIFSLPAIGLVAITVAGYFYEDDVVR 60
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNR 118
+D + E ++ I + + LF I + ++ +L+ SLN
Sbjct: 61 TQFLDQINQLMGESSSEQIDSLLSSATVQSDRVLFQIIGIGTLLFSATTVFISLQDSLNT 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ + + I RL+S + L++ I ++++
Sbjct: 121 IWSIKAKPKKGIVKFIINRLLSLAMIAALGFLLLVSLLADTVISFIQTHIKEILDG--AT 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ II I ++ + + + LP AK K + G T + +V G Y+
Sbjct: 179 IYIIQIMNIAISLGFITLVFAIIFKVLPDAKLKWRDVWVGAFVTTVLFVAGKFSLGFYLG 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
T + + Y S + LV++Y + + GA++
Sbjct: 239 T-ANLTDSYGAAGSFVAILVWVYYSVLILLFGAQVT 273
>gi|153813966|ref|ZP_01966634.1| hypothetical protein RUMTOR_00173 [Ruminococcus torques ATCC 27756]
gi|145848362|gb|EDK25280.1| hypothetical protein RUMTOR_00173 [Ruminococcus torques ATCC 27756]
Length = 236
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 49/225 (21%), Positives = 105/225 (46%), Gaps = 5/225 (2%)
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ V+ V +PE +A I + QV + + ++ + A + + GV ++ LN
Sbjct: 1 MSEVMTAVLKVFPESVAPMIRSIVSQVYF-QSGTIVPVTIVVALWSAGKGVLSVTSGLNS 59
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+E R+++ R+ + Y ++ + +V + V + + P L ++ I
Sbjct: 60 ICENMETRNYFYLRIRASFYTVIFLLAIVSSLVLSVFGNRISVMIYEHIPFLSKVVEFII 119
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK----SKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
R + T + L + V+ FLP + + + LPG +FT W++ + F+ Y+
Sbjct: 120 RIRTFVTFVVLTVFWDLVYRFLPNRRNMAKTTLRKQLPGAVFTACGWLLLSFFFSVYLDV 179
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
F +++MY L +I+ +++LY +LG E+NA + + ++
Sbjct: 180 FKGFTSMYGSLTTIILIMLWLYGCMYIILLGGEINALLEKFLQKR 224
>gi|172036200|ref|YP_001802701.1| putative ribonuclease BN [Cyanothece sp. ATCC 51142]
gi|171697654|gb|ACB50635.1| putative ribonuclease BN [Cyanothece sp. ATCC 51142]
Length = 304
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/291 (13%), Positives = 104/291 (35%), Gaps = 18/291 (6%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVID 64
+ + + + E+D M + +S A+ S+FP ++ ++ G + ++
Sbjct: 13 KIVQLFTRTVVKWQEDDCIEMGAALSYYAIFSLFPILLVILSITGLILGPDTNAYTQILV 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
A P + + ++Q+ + G I +S AL ++++ ++V
Sbjct: 73 FAKRALPIEAYRIVESTLVQL-NESSLGAGIIGFSILFVTASRIFRALGRAVDKIWKVHH 131
Query: 125 MRSWYITRLIS---------------FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
+S + + L V+L+ + V + + +
Sbjct: 132 RQSNRGGWVWTIINFIQNQIIAFLLVLSSTALLLVSLLSNIALKVFLKIIKNVEQVITWF 191
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ + + ++ T L ++ ++ LPA K K I G + + + + L +
Sbjct: 192 RVDEAFLWNSLQLGVTFFLLTSVVMLLYKTLPATKVKWSDIWIGALISVSLFSLLQSLVS 251
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ ++ Y + M L+++++ F LG E + ++
Sbjct: 252 NGVIRIGEQFRAYGIVGGFMVLLLWIFLTCQIFFLGCEFTYVYTHLFGSRQ 302
>gi|227549942|ref|ZP_03979991.1| ribonuclease [Corynebacterium lipophiloflavum DSM 44291]
gi|227077958|gb|EEI15921.1| ribonuclease [Corynebacterium lipophiloflavum DSM 44291]
Length = 367
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 101/271 (37%), Gaps = 9/271 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ E F +E G +++ I+ ++L+++P + GF + + +
Sbjct: 43 FVAHLLRMNERFAKEGGNQLSAGITYFSVLALYPLAMLLFAGMGFFLANRPELIEQIRTQ 102
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVV 123
+ + + I+ I + + I L + + LR+ ++ +
Sbjct: 103 LDNSLGGEVGGVISQLIDSAI-AQRGAVAGIGLLTTLWSGLGWMNNLRVGISAMWKLDAN 161
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNG 180
E ++ + +L ++ + ++ V + LGN ++W
Sbjct: 162 EGGNFIMKKLWDLLGLIGLILLFILAFAVTAIGTSSFTSDVMDHFGLGNFPGARFVVWLI 221
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + A F+ + ++ +F+P K S L G + ++ + F IV+ +T +
Sbjct: 222 GLAVGIFANFLVMAWLVIFMPRTKVPWRSGLKGALLGAFAFELIKQ-FATVIVSSATKNP 280
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V LY++ + + A+
Sbjct: 281 AGAIFGPIIALMVVLYLIWRVVLYVSAWTAT 311
>gi|260063160|ref|YP_003196240.1| hypothetical protein RB2501_00081 [Robiginitalea biformata
HTCC2501]
gi|88783254|gb|EAR14426.1| hypothetical protein RB2501_00081 [Robiginitalea biformata
HTCC2501]
Length = 323
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 118/283 (41%), Gaps = 13/283 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL------GAHQFVPT 61
+FD+I + AS I+ S L++FP ++F L F+ G F
Sbjct: 35 LFDLIVMYARGIIRGALSTRASAIAFSLFLAIFPLLIFLVTLIPFVIPLVSVGNSNFDAQ 94
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + P+ + T+ Q+ GL + + L + +NGV A+ +Y
Sbjct: 95 FLSFLEAFLPQATGEYFTEVYQQIRDQKQGGLVSSAFLISILLMANGVNAIFGGFENSYH 154
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI----- 176
+ R+++ + L+ SV L++ + +V + F A + +++
Sbjct: 155 IELTRNFFKQYAYALFVGLILSVLLIVGAVFYVYFEFYVLGYLTEFTARNSGVVLDEGEI 214
Query: 177 --IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ G++ +L ++ ++ F K G + T + ++ + LF YI
Sbjct: 215 LGVRVGKVLFFILLTYLTTAILYYFGTTEGKKAKFFSYGALMTTLLILLTSYLFGVYIDN 274
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ Y+ +Y L+ ++ ++++++ +LG ELNA++
Sbjct: 275 FARYNELYGALSGLLILMIYIWLNSNILLLGFELNATLNYLRK 317
>gi|163815794|ref|ZP_02207165.1| hypothetical protein COPEUT_01974 [Coprococcus eutactus ATCC 27759]
gi|158448935|gb|EDP25930.1| hypothetical protein COPEUT_01974 [Coprococcus eutactus ATCC 27759]
Length = 365
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 56/276 (20%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ I++ + + ++ A A+ + LLS+FP + +L +
Sbjct: 12 MKKRAVILYHKLRLFMAEMNKDQVSAFAAQSAFFLLLSLFPLAMTLLTFVKYLPFTEV-- 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRA 119
V+++V +PE I ++ + + +S L + +S G A+ L
Sbjct: 70 QVVEIVRELFPEEINSNFEFMFAEIFNSRSSLIATAVSILLTVWSASKGTMAIGRGLTFM 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV------RKFFPALGNL 173
+ ++++ R I Y L+ V +V + +++ + ++ + + F + +
Sbjct: 130 TGKEDSANYFLRRAIHTLYTLIFCVMIVAVMVIYILGDVVVSKILVRLDSVEGFQLVDTV 189
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+ +I LF ++ + LP K +I + +PG FT I W++ + + YI
Sbjct: 190 ADILSIIKIAFAPTVLFGVMLVAYWALPVGKVRIKTAMPGAAFTTILWMLLSFGVSSYIN 249
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ MY LAS++ ++LYM ++GAE+N
Sbjct: 250 LVGINTYMYGSLASVILLALWLYMCMYVMLIGAEIN 285
>gi|300932896|ref|ZP_07148152.1| ribonuclease, putative [Corynebacterium resistens DSM 45100]
Length = 330
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 112/282 (39%), Gaps = 8/282 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD + E + E+ G A+ I+ ++LS+FP ++ ++ + G + + V+
Sbjct: 36 WPWFDHVMRMQERYSEQGGNQFAAGITYFSVLSLFPILMLVFSIVAMVLAGDQELLNRVV 95
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D V + +++ +++ I Q + +F+I L A + + LR+ + ++V
Sbjct: 96 DKVSQSGGGKMSETLSEVIHQAVD-QRGSVFSIGLLLALWTGLGWMAHLRMGASAMWKVS 154
Query: 124 EMRSWY----ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ I I +L+A + ++ + + + + ++ +
Sbjct: 155 GSAKSFLSGKIKDFIGLIGLLVAFIIAFAITAIGNSGLTMRILETLHLEQVPGIRILTFA 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++A ++ +++ +LP K+ S+ I +++ V T + + +
Sbjct: 215 VALVVALIANYLVFVWLIAYLPRTKTDRPSVFRAAIIGAVAFEVFKQFATIFFSNALS-N 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A I+ +V +Y + + + A+ + P
Sbjct: 274 PAGAAFGPIIGIMVLMYFVWRIVLYCSAWAATTERSLAQATP 315
>gi|300310773|ref|YP_003774865.1| exoribonuclease BN transmembrane protein [Herbaspirillum
seropedicae SmR1]
gi|300073558|gb|ADJ62957.1| exoribonuclease BN transmembrane protein [Herbaspirillum
seropedicae SmR1]
Length = 317
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 94/276 (34%), Gaps = 6/276 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
+ + AI ++++ +M + I+ + S+ P +V +AG G +++ +
Sbjct: 12 WQMTMAAINAWIDDFAPSMGAAIAYYTIFSIAPMLVIAIAVAGMLFGHDAAQGEIVNQIR 71
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYR---VV 123
A I + V + IS + ++ L+ +L+R +R V
Sbjct: 72 DIVGTEGAFAIQGLLKSVSQPREGMIAAGISVVTLVIGATAVFSELQSALDRIWRIPAVK 131
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ L ++ V A R + L++
Sbjct: 132 RKSGVWQLARTRLLSFGLILGLGFLLIISLVVSAALAALGRWWGGWFEGWQLVLQLLNFV 191
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + ++ F+P + G + T + +++G L Y+ + ++ +
Sbjct: 192 LSFVVFSTLFSMIYKFMPRVTLSWRDVWIGAVATTVLFIIGKYLIGLYLGSTG-MTSGFG 250
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S L+++Y F+LGAE + +
Sbjct: 251 AAGSFALLLLWIYYSAQIFLLGAEFTWIYANNFGSR 286
>gi|254372164|ref|ZP_04987656.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569894|gb|EDN35548.1| tRNA processing ribonuclease BN [Francisella novicida GA99-3549]
Length = 398
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 101/276 (36%), Gaps = 10/276 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPVFFIIINILNAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + +F A + I + + L S + ++ L I+LN+ +
Sbjct: 68 NLQNFLFENMLPATATTVQQYITNI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R + L+ + + + + + + + + +
Sbjct: 127 YANKQRPMIQSLLVYWALMTMGPLLMGFVFISSTYLISMA--------WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSSLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFSIAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y L+ I ++++++ +LGA + +M
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVMIRAMQYMK 274
>gi|82703272|ref|YP_412838.1| ribonuclease BN, putative [Nitrosospira multiformis ATCC 25196]
gi|82411337|gb|ABB75446.1| ribonuclease BN, putative [Nitrosospira multiformis ATCC 25196]
Length = 321
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 105/284 (36%), Gaps = 15/284 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVV 66
++ ++ + +V++ +M + ++ L S+ P ++ + AG G + +
Sbjct: 6 IWTLVKASFSSWVDDYAPSMGAALAYYTLFSIAPLLLIVISTAGLIFGEEAVRGEIFGQL 65
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ A + + V + + ++ L+ + +R +R
Sbjct: 66 RDLMGDQGAAAVEGLLASVSKPEEGAAGAVVGTVLLLVGATTVFGELQNAFDRIWRAPVK 125
Query: 126 ---------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
TRL+SFG +L +++ A+ + FF L ++
Sbjct: 126 DKNDKNGGIWELIRTRLLSFGIILGIGFLMMVSLVFNAAVSALGKWWGGFFSGLE---VL 182
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + ++ F+P K + + G + T + + +G +L YI S
Sbjct: 183 VTSLNFIFSFVFTTAVFAMLYKFMPKVKIQWRDVGAGAVVTALLFTIGKILIGLYIGK-S 241
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S+ + S++ LV++Y F+LGAE +K
Sbjct: 242 AISSGFGAAGSLVVVLVWVYYSAQIFLLGAEFTWVYSHARGSRK 285
>gi|311742300|ref|ZP_07716109.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
gi|311313928|gb|EFQ83836.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
Length = 295
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 53/278 (19%), Positives = 109/278 (39%), Gaps = 14/278 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + +A+ + A+LS+ P I A GF+ V V
Sbjct: 17 QVAAHTVSTCLRHRVTGLAAEAAFFAILSLPPLIFGLAGTIGFVAERYRVAQVEVFKDRV 76
Query: 70 W--------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
P + + I + +VL + +I + A + S + ++ Y
Sbjct: 77 LELASQALTPSTVDQVIAPTLDEVLEGGRFDVVSIGFVLALWSGSRALNVFIDTITIMYG 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R TR +SFG +A V +++ + +A P + + + + +
Sbjct: 137 LGGRRGIVKTRALSFGLYAVALVIGIVLVPLVLAGPEVVRAL------VPDEATFMTALY 190
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A +L L ++ + + + LPG FT + WV+GA + S +++
Sbjct: 191 WPAVLLMSVGFLASLYHWAVPERKSWAAGLPGAAFTLLMWVLGAYFVRWALGFSSGGTSI 250
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+ LY+L + ++GA +NA++ +
Sbjct: 251 YGPLAAPIAVLLLLYVLSISVLIGAAINAAIDELRHPR 288
>gi|116622079|ref|YP_824235.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116225241|gb|ABJ83950.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 287
Score = 105 bits (263), Expect = 6e-21, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 100/275 (36%), Gaps = 9/275 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGA 69
I + + ++ + M + ++ LS+ P +V +AG GA ++ + G
Sbjct: 4 FIGETLRNWHRDRAPRMGAALAYYITLSLAPTLVIVLAIAGLAFGAKAAQGRLVWQIQGL 63
Query: 70 WPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEM--- 125
AK I I A + L I + + V LR +LN +++ +
Sbjct: 64 VGHEGAKVIQALIDGTRAPYSGMLATLIGLATLFFGGTAAVTELRDALNTIWQIPDDVQA 123
Query: 126 ---RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
R+ + F L V V++ + A V+ F A ++I +
Sbjct: 124 SHARNLFNVIKERFQAFALVLVAGVVLLLSVILHAWISAAVKYFRLAGTAPPVLIHSFDW 183
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L + + FLPA K + G + T I + G Y+ + ++ Y
Sbjct: 184 SVSFALLTLLFASIFKFLPAVDLKWQDVAAGAVVTSILFTAGKFFLGVYLTE-AGFAENY 242
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S++ LV++Y LGAE I +
Sbjct: 243 GAAGSLVMLLVWVYYSAQVVFLGAEFTQVYAIRFG 277
>gi|145225446|ref|YP_001136124.1| putative ribonuclease [Mycobacterium gilvum PYR-GCK]
gi|315445799|ref|YP_004078678.1| ribonuclease [Mycobacterium sp. Spyr1]
gi|145217932|gb|ABP47336.1| putative ribonuclease [Mycobacterium gilvum PYR-GCK]
gi|315264102|gb|ADU00844.1| ribonuclease, putative [Mycobacterium sp. Spyr1]
Length = 346
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 109/277 (39%), Gaps = 9/277 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
+ FD + A E + + G A+ I+ + ++FP ++ G ++AGF+ + +
Sbjct: 20 QRARRPWFDHVMRAQERYKDSKGDFYAAGITYFTIFALFPLLMLGFSVAGFVLANQPELL 79
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V + + + + + + + + + I AA+ + LR +L++
Sbjct: 80 QDVEERIRSTFSGDLGQQLVTLMDSAIE-SRGAVGLIGLATAAWAGLGWMANLREALSQM 138
Query: 120 YRVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKFFPALGNLL 174
+ + E + T+L +L V +++ + +L R FP L
Sbjct: 139 WGLFRGETPGFVKTKLSDLVALLTTFVAIIVTLALSALGNSSLVENILTRIGFPDSPVLT 198
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+++ I ++L ++ ++ LP + S + + +++ V ++ + Y+ +
Sbjct: 199 VVLRASSITVSVLVSWLLFTWIIARLPRERVGFRSSVRAGLIAALAFEVFKLVASIYLRS 258
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
T A ++ +VF Y+ + A+
Sbjct: 259 VLT-GPAGATFGPVLGLMVFAYITSRLILFSTCWAAT 294
>gi|218247482|ref|YP_002372853.1| ribonuclease BN [Cyanothece sp. PCC 8801]
gi|257061182|ref|YP_003139070.1| ribonuclease BN [Cyanothece sp. PCC 8802]
gi|218167960|gb|ACK66697.1| ribonuclease BN [Cyanothece sp. PCC 8801]
gi|256591348|gb|ACV02235.1| ribonuclease BN [Cyanothece sp. PCC 8802]
Length = 322
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 34/288 (11%), Positives = 95/288 (32%), Gaps = 18/288 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
+ I + ++D + +S A+ S+FP ++ ++ + ++ V
Sbjct: 20 QLFMGTIIKWQQDDCLEKGAALSYYAIFSLFPILLVILSIFSLILGSRTNIYEQLLAVTQ 79
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + +L + + I +S AL ++++ ++ + +
Sbjct: 80 RVLPPESYPIVVVTLLDL-TKSSISAGIIGFGILFITASRIFAALDQTVSKIWKHPDQKP 138
Query: 128 WYITRLISFGYVLLASVTLVIMSFVF---------------VAIPLALAYVRKFFPALGN 172
++ + + + V + + K +
Sbjct: 139 LNLSWKAMILKYIRDKILAFFLVLSTAFLILLSLLSNIAIKVILEIIKNVESKLTWIQVD 198
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L+ + ++ T + L++ ++ + LP+ K I G I T + + L + +
Sbjct: 199 EALLWNSLQVSLTFILLYLVVMVLFKILPSTSVKWSDIWLGAILTVTLYSLLQKLVSSGV 258
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ Y + M L+++++ F LG E + ++
Sbjct: 259 IRIGEQFRAYGVIGGFMMLLLWIFLTCQIFFLGCEFTYVYTHLFGSRR 306
>gi|182414042|ref|YP_001819108.1| ribonuclease BN [Opitutus terrae PB90-1]
gi|177841256|gb|ACB75508.1| ribonuclease BN [Opitutus terrae PB90-1]
Length = 298
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 93/274 (33%), Gaps = 5/274 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+++ I+ + + + + ++ ++V P +V +A + + I
Sbjct: 2 VWETIKAYYFDKVPQLGAALAFYTTVAVAPLLVLAVAVAEIVFKEEQARRRILGEIENLV 61
Query: 72 EVIAKPITDEIL--QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-MRSW 128
A ++ + A +S + L+ +LN +R
Sbjct: 62 GSDASRALAQVEPPNYGSDTATFATIVSLATLMVGAVFVFVHLQDALNTIWRAPAYTGEG 121
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYATML 187
++ + + L A + + V + + AL ++ + +L L + +
Sbjct: 122 WLATVKRRLFSLGAVLATGFIMLVSLTLSAALTWLGENASSLAELPTGVWQTLNFTFSFG 181
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + LP + + + G T + +V+G + Y+ S+ ++ Y S
Sbjct: 182 VITFLFAIIFKLLPDVEVRWRDVGTGAAVTALLFVLGKTVLGLYLAR-SSVTSAYGAAGS 240
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ L++ Y LGAE +KP
Sbjct: 241 AIALLLWCYYAAQILFLGAEFTRIHARTAGGRKP 274
>gi|318079567|ref|ZP_07986899.1| hypothetical protein SSA3_23484 [Streptomyces sp. SA3_actF]
Length = 263
Score = 105 bits (262), Expect = 7e-21, Method: Composition-based stats.
Identities = 44/241 (18%), Positives = 89/241 (36%), Gaps = 3/241 (1%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--L 93
+L++ P ++ +A L T+I + P + D + ++L A L
Sbjct: 1 MLALLPALLVTV-VASALLGPDTARTLIAYLTDYAPGQAGPQLHDLLTRMLTENATAWPL 59
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
+A + + + + R SL+R +R + R+ L LV+ + +
Sbjct: 60 IATGVFSAFWSACSYLAVFRRSLHRMHRTTDARTPVKRAHRIVLTALALLGLLVLTALLL 119
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
V + + + + L R A + + P + LPG
Sbjct: 120 VLSNPVVDAIGRALHLDEGVALAWRVLRWPALLCLVSGLAWVAFSNGPRIARRRRYSLPG 179
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + W++ FT Y TYS +Y LA + L++L++ + + GA+ A +
Sbjct: 180 GVLATVLWLLATAGFTLYTSLIGTYSALYGSLAGSVVFLIWLWLSNLALLAGAQFAAELG 239
Query: 274 I 274
Sbjct: 240 K 240
>gi|91775562|ref|YP_545318.1| ribonuclease BN [Methylobacillus flagellatus KT]
gi|91709549|gb|ABE49477.1| ribonuclease BN [Methylobacillus flagellatus KT]
Length = 312
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 104/286 (36%), Gaps = 12/286 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPT 61
+ ++ ++ + + + ++ + S+ P +V +AG+ G
Sbjct: 15 HRLKCLRQLLVQSVLSWFSHRATSKGAALAFYTMFSLTPILVLVIAIAGYFLGERAAHGE 74
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNRAY 120
++ + E A+ I + + + + T+ A A + ++ L+ SL+ +
Sbjct: 75 IVAQISDLVGESGAQVIQSMLAKSSNPKSGIVATLIASALLFIGATTVFAELKASLDEVW 134
Query: 121 RVVEM---------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
V + + TRL+SF ++ + L+ V + L + +F
Sbjct: 135 EVSKDTARGGKAAIGNLVKTRLLSFSIIVSLAFLLLTSLLVNAGLALVEQFFAEFVGRFI 194
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ + + + + + LP K + G FT I + +G L Y
Sbjct: 195 TAIGVFKHISALVSFGVITSMFAVIFKMLPDVKLPWSDVWIGAAFTAILFSLGKYLIGIY 254
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ S ++ + S++ L+++Y F GAE+ + +
Sbjct: 255 LGN-SAVASSFGAAGSLIALLLWVYYSAQIFFFGAEITRQYALTFG 299
>gi|300776118|ref|ZP_07085977.1| ribonuclease BN family protein [Chryseobacterium gleum ATCC 35910]
gi|300505251|gb|EFK36390.1| ribonuclease BN family protein [Chryseobacterium gleum ATCC 35910]
Length = 313
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 95/286 (33%), Gaps = 10/286 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
M + ++++ D + ++ ++ A+ S+ ++ + G F G
Sbjct: 1 MIKTAKFFWEVLKDTFTEWNNSSASKDSASLAYYAIFSIPGLLIIIIWVLGNFFGEEAIR 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQ-VLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + G +AK I + ++ + + + + S+ L+ SLN
Sbjct: 61 GQISTQISGIMGPDVAKSIEGMLAGALIDKKNIFMKAVGVGSLVFGSTTLFFQLQHSLNT 120
Query: 119 AYRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V + + R S G +L+ L+I + I L + ++F
Sbjct: 121 LWEVEAAPKKALVKFLLDRANSLGMILILGFLLMITMILSSLISLFNTIITQYFGF--ET 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+++ + + + LP + G T + + +G L + Y
Sbjct: 179 YMLVELVNFAVGFGLVMLLFALMFKVLPDVLISWKPVWKGAFLTTVLFTLGKFLLSLYFN 238
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S + +++ ++++ + GAE K
Sbjct: 239 QVKPTSA-FGAAGTVILIMMWINYSCMLIFFGAEFTKVYTYKKGYK 283
>gi|83858285|ref|ZP_00951807.1| ribonuclease BN, putative [Oceanicaulis alexandrii HTCC2633]
gi|83853108|gb|EAP90960.1| ribonuclease BN, putative [Oceanicaulis alexandrii HTCC2633]
Length = 305
Score = 105 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 45/280 (16%), Positives = 100/280 (35%), Gaps = 8/280 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVV 66
+ AI+ + + A LL++ P ++ A++ G + V
Sbjct: 19 LKVTVRAIDRMMAREVMLFAGGAGFFGLLALVPAVLVAASVYGLVFSEDDAVAQVARLQV 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVV 123
P +T ++ Q+ L +A + ++ G +A+ LN+ R
Sbjct: 79 TAVLPPSAHTFLTSQLSQLAGSSNTSLTVQGVIALFIAWFAAARGAKAIIAGLNQIARRG 138
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++R+ L++ G V+ LV+ + + IP + + +
Sbjct: 139 DLRNILHFNLLAMGAVIAGGALLVMANLAILTIPNMIRPALRMLGSDAADFGASLINEWS 198
Query: 184 ATMLALFIGLIFVHLFLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ LA+ L+ ++ F+ ++ + G W++ + FT Y+ T S
Sbjct: 199 ISYLAMLTALLLLYRFVMQRAGETSWTASFIGAATAATIWLIASKGFTLYVATIVNPS-T 257
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y L +++ L+++Y G L + + P
Sbjct: 258 YGPLGTLIVFLLWVYWTSYAVFFGGALGVEIDRHRGEAHP 297
>gi|197286667|ref|YP_002152539.1| hypothetical protein PMI2838 [Proteus mirabilis HI4320]
gi|227355141|ref|ZP_03839552.1| ribonuclease [Proteus mirabilis ATCC 29906]
gi|194684154|emb|CAR45591.1| putative membrane protein [Proteus mirabilis HI4320]
gi|227164928|gb|EEI49775.1| ribonuclease [Proteus mirabilis ATCC 29906]
Length = 340
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 93/274 (33%), Gaps = 11/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ A E F + G + I+ + LS+ P ++ AGF+ + +I
Sbjct: 50 FIAHLIRAAERFTDRMGNQFGAAITYFSFLSLIPVLMLSFACAGFILASNPDLLAKLITG 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V + + + + + A Y N V LR ++ R +
Sbjct: 110 VANSIDDPTLASTVQQSIDTAVRQRTTVGLTGLAIALYSGVNWVGNLRQAILAQSRPIWE 169
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLII 177
R+ Y F ++ V LVI + A + + L
Sbjct: 170 RNKEDQEKIYFRYFRDFLALIGLLVALVITITLTSVAGSAQKLIVHTLGLDGIEWLTPAW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ +++ LP + K +S+L G + I + + + T + ++
Sbjct: 230 TTIGLTISISANYLLFLWILWILPRHQPKRISLLKGTLIAAIGFEILKSVMTWLLPRLAS 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A S++ + F Y + A A+
Sbjct: 290 -SPSGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 322
>gi|114570028|ref|YP_756708.1| ribonuclease BN [Maricaulis maris MCS10]
gi|114340490|gb|ABI65770.1| ribonuclease BN [Maricaulis maris MCS10]
Length = 304
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 99/285 (34%), Gaps = 8/285 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+F +I AI + D A S +L++FP I + G + +
Sbjct: 12 PHLLVRIFSVIIAAISRAMARDVMLFAGGASFFGMLALFPAIALAMSAYGLIFSASDAEQ 71
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNR 118
I P + ++ ++ P L + A + +S GV+A+ LN
Sbjct: 72 QIARFAEIMPPGAQDFVLGQMGRLADAPIAALSVNGFIALMIALFAASRGVKAIIAGLNH 131
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++R+ +++ VL+ L + + + IP+ LA + L +
Sbjct: 132 LAEDRDIRNILQFNILAMMSVLVGGALLTVANLAVLLIPVLLARLAAALGIEALDLGSVV 191
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK---SKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
N +FI L ++ + + I + W+ + F+ Y+
Sbjct: 192 N-EWTVAAGFMFIALELLYRVTMRKRKQAVSWRASTVAAIVATLLWLGLSKGFSTYVAEV 250
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+S +Y L +++ L+++Y G L + +
Sbjct: 251 IDFS-VYGSLGALVVFLLWIYWSAYAVFFGGALAIEVDNRVRASR 294
>gi|58584733|ref|YP_198306.1| tRNA processing exoribonuclease BN [Wolbachia endosymbiont strain
TRS of Brugia malayi]
gi|58419049|gb|AAW71064.1| tRNA processing exoribonuclease BN [Wolbachia endosymbiont strain
TRS of Brugia malayi]
Length = 274
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 126/281 (44%), Gaps = 13/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++++ I++ +Y A+ + DG A ++S LLS+FPF++ LA
Sbjct: 5 LKKFYGIIY-CLYHALIDTIYNDGMEHAGYLSFLILLSIFPFLIVLMALASTFANFLDQY 63
Query: 61 TV-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+A
Sbjct: 64 NIGWTFIIDNMPQDILASLMPRIREIISGPPQSLLTLAIVGAIWTASSTIEGLRTILNKA 123
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+V + + R++S L+ + + + +P+ + + +
Sbjct: 124 YKVPVSPPYVLRRILSILQFLIITFIITLTIVFSTLVPMLIDFSYHG----------LSY 173
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTY 238
R LFI + +++ LP + + + PG + W V A F Y+ +F
Sbjct: 174 TRYLLIEFVLFIVVSWLYFMLPNIRQNVSDVFPGSYIAVMLWTVSASAFKQYLRASFDQL 233
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y L ++ L+F YM+ + FI GA+ N + + +
Sbjct: 234 DLIYGSLGGVVVSLLFFYMVSLIFIYGAKFNFQLKCFNGSR 274
>gi|256380456|ref|YP_003104116.1| ribonuclease [Actinosynnema mirum DSM 43827]
gi|255924759|gb|ACU40270.1| ribonuclease [Actinosynnema mirum DSM 43827]
Length = 339
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 103/276 (37%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + + D + A + E G A+ ++ ++LS+ P ++ G +AG +
Sbjct: 16 LRARYPWL-DHVIRAGVRYTERYGTHYAAAVTYFSVLSLVPLLMIGFAVAGIVLTSQPAL 74
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + + A P + + + + Q + + L AAY + LR +L
Sbjct: 75 LDDLRGAITEAVPGSLGDTLNEVVGQAIDSK-GTVGVFGLLGAAYSGIGWITNLRDALTA 133
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--- 175
+ + + + + L+ +++S A+ A++ L +
Sbjct: 134 QWGYPKADLPLVKTAVRDLFALIGLGIALVVSVGITAVGSGFAHLVLRGIGLDGVWWAEA 193
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ G I + A ++ ++V LP S + G T + + + + Y+
Sbjct: 194 LLRAGTIVLGLAANWLVFLWVLAKLPRKPVSWRSAMRGAAVTSVGFELLKQGGSIYLGII 253
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
T S ++ LVF +L F + A A+
Sbjct: 254 GT-SPTGLAFGPLIGVLVFANLLAQFMLFMAAWTAT 288
>gi|171779627|ref|ZP_02920583.1| hypothetical protein STRINF_01464 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281729|gb|EDT47163.1| hypothetical protein STRINF_01464 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 306
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 60/274 (21%), Positives = 116/274 (42%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + ++H+ + A ++ LL+ FP IV AN+ +L V ++ +
Sbjct: 16 WQPLQVYLKHYRSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--VNILLAFMKK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + ++ + + + P+ + ++ L A + S + +L+ ++N+AY V + R +
Sbjct: 74 NLPTNLYPSVSAITIDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVAQHRDF 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I RL+ LL L + L + ++ + +I N T+L
Sbjct: 134 VIGRLVGVIGSLLILFLLTFVLIFSTFSKAILQVINSYYDLSDTMATVILNLAQPVTVLT 193
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ IGL+ ++ LP + + ILPG IFT + V LF+ YI+ S
Sbjct: 194 IVIGLMLLYFILPNVRIRRFRYILPGTIFTSVVIVFLNNLFSSYILRTFERMVDIKTFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++ L ILGA NA+ K
Sbjct: 254 VVIFVLMLWFIFLAHILILGAIFNATYQELRQGK 287
>gi|240146019|ref|ZP_04744620.1| YihY family protein [Roseburia intestinalis L1-82]
gi|257201833|gb|EEV00118.1| YihY family protein [Roseburia intestinalis L1-82]
Length = 285
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 54/266 (20%), Positives = 120/266 (45%), Gaps = 4/266 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + + + A ++ + +LS+ PF++ ++L + + T++
Sbjct: 2 IWKIIGNVMSFMGKCKRDKINAYSAQSAFFIILSLIPFLMVFSSLLQYTSVTE--GTLLK 59
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ PE IA + I +V + G+ +I+A+ A + ++ GV+ + LN + E
Sbjct: 60 IIERVMPEYIAPFLISLIDEVY-NRSAGIISITAIVAIWSAAKGVQYMTDGLNSVNDLEE 118
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+W + R+ + Y ++ V +V V V ++ P L + + ++ + R
Sbjct: 119 TRNWLVLRMWAVVYTVIFLVAIVFTLLVIVFGNSLQKLASQYIPLLRHAVDLLAHFRGLI 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L + + LP K S LPG ++W + ++ + Y+ F+ +S MY
Sbjct: 179 MLVMLIVFFDVIFTALPNKKLTFKSQLPGAAICGVAWYIFSIGVSIYVDYFNGFS-MYGS 237
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
L +I +++LY ++ AE+N
Sbjct: 238 LTTIALIMLWLYFCMYIMMMSAEVNV 263
>gi|227832106|ref|YP_002833813.1| hypothetical protein cauri_0276 [Corynebacterium aurimucosum ATCC
700975]
gi|262184041|ref|ZP_06043462.1| hypothetical protein CaurA7_08618 [Corynebacterium aurimucosum ATCC
700975]
gi|227453122|gb|ACP31875.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
Length = 388
Score = 105 bits (261), Expect = 9e-21, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 103/284 (36%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVIDVVF 67
+I F + A+ ++ L++ P ++ ++A + + + + +
Sbjct: 44 VIRRTWNDFFHDAFMDRAAGMTYFTLMAFAPTVLAAYSIATLIFSSRQAEVEQLTSEFIE 103
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +++ + ++ A+G IS + + +S V A + N Y VE
Sbjct: 104 QYVPGSLSEQAHTVVGTIIGSSAQGTLALVISLAISLFSASAYVRAFSRTANTVYGRVEG 163
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-----------ALGNLL 174
R T + +G + V VI+ F + L + L
Sbjct: 164 RGIIRTWALMWGLTAVIVVGAVIVLFANLLRDAVLNEGLIPLARNVGLEDVATYLVRIFL 223
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ R T++ + + ++ F P + + I G + + V L Y+
Sbjct: 224 PVWNWLRFPVTVVVVLTLIAVLYHFSPNVRPGRFRWITYGSVVALVGTVASWGLVGLYLK 283
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ S Y L+++M V +++ I+G +++A ++
Sbjct: 284 YFAAASA-YGALSTVMAVFVATWLMNTVLIVGLKIDAEVLRAKE 326
>gi|254373645|ref|ZP_04989129.1| tRNA processing ribonuclease BN [Francisella novicida GA99-3548]
gi|151571367|gb|EDN37021.1| tRNA processing ribonuclease BN [Francisella novicida GA99-3548]
Length = 398
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 102/276 (36%), Gaps = 10/276 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 68 SLQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + L+ + + + + + + + + +
Sbjct: 127 YANRQRPMLQSLLVYWALMTMGPLLMGFVFISSTYLISMA--------WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSGLSLIFLTTGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y L+ I ++++++ +LGA + +M
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVMIRAMQYMK 274
>gi|194293025|ref|YP_002008932.1| ribonuclease bn [Cupriavidus taiwanensis LMG 19424]
gi|193226929|emb|CAQ72880.1| putative ribonuclease BN [Cupriavidus taiwanensis LMG 19424]
Length = 307
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 95/277 (34%), Gaps = 7/277 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDV 65
++ AI + + + +S L S+ P +V ++AG F GA +
Sbjct: 20 RTLRVVGAAITSWFAHRAASKGAALSFYMLFSLAPILVLVISIAGLFFGAEAARGEIFAQ 79
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ G + A I + G+ I+ +++ L+ SL+ + V
Sbjct: 80 LEGLVGDQGAAAIEGILAATHRAGGSGMAALIATGILFVGATSAFAELKSSLDDIWHVPV 139
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIP----LALAYVRKFFPALGNLLLIIWNG 180
+ +L+ + + V ++ + I + + L +
Sbjct: 140 PDTAGWRQLLRTRLLSFSLVLVLAFMLLVSLIVNAALAVVERIWGQLWTQTWLAPVAEAI 199
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + LP A+ + G + T + + +G L Y+ S ++
Sbjct: 200 SSLFSFAVVTALFAVIFKMLPNARIAWRDVTMGAVITALLFSIGKRLIGLYLGN-SAVAS 258
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S++ ++++Y F GAEL + +
Sbjct: 259 SYGAAGSVVALMLWVYYSAQIFFFGAELTRQYALQFG 295
>gi|325262470|ref|ZP_08129207.1| ribonuclease BN [Clostridium sp. D5]
gi|324032302|gb|EGB93580.1| ribonuclease BN [Clostridium sp. D5]
Length = 282
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
V+ V +P + I+ + QV + + ++ + A + + GV ++
Sbjct: 54 PVTRQDVMAAVTQVFPTTVEGLISSIVDQVY-QQSSTIIPVTIIVALWSAGKGVLSMTSG 112
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+N Y E R+++ RL + Y ++ + +V+ + V +V K P L ++
Sbjct: 113 MNLIYENTETRNYFYLRLRASFYTVIFILAIVLSLSLSVFGNSISMFVYKHAPVLTTIMD 172
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAA----KSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ R T++ L + V+ +LP K+ + LPG +FT W++ + +F+ Y
Sbjct: 173 FLIRIRTLLTLVVLTLFWDLVYKYLPNRTNRSKTTMKQQLPGAVFTSCGWLLISFIFSIY 232
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ F+ +S+MY L +I+ +++LY+ +LG ELNA + R+
Sbjct: 233 LDIFTGFSSMYGSLTTIILIMLWLYVCMYVILLGGELNALLEGMGGRR 280
>gi|226327637|ref|ZP_03803155.1| hypothetical protein PROPEN_01509 [Proteus penneri ATCC 35198]
gi|225204163|gb|EEG86517.1| hypothetical protein PROPEN_01509 [Proteus penneri ATCC 35198]
Length = 339
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 92/274 (33%), Gaps = 11/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ A E F + G + I+ + LS+ P ++ AGF+ + +I
Sbjct: 50 FIAHLIRAAERFTDRMGNQFGAAITYFSFLSLIPVLMLSFACAGFVLASNPDLLAKLITG 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V + + + + + A Y N V LR ++ R V
Sbjct: 110 VANSIDDPTLASTVQQSIDTAVRQRTTVGLTGLAIALYSGVNWVGNLRQAILAQSRPVWE 169
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLII 177
R+ Y F ++ L+ + A + + L +
Sbjct: 170 RNKEEQEKIYFRYFRDFLALIGLLFALIFTITLTSVAGSAQRMIVHILGLDGIEWLTPVW 229
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ +++ LP + K +S++ G + I + + + T + ++
Sbjct: 230 TTIGLTISITANYLLFLWILWILPRHQPKRISLMKGTLIAAIGFEILKSVMTWMLPRIAS 289
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A S++ + F Y + A A+
Sbjct: 290 -SPSGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 322
>gi|297196436|ref|ZP_06913834.1| ribonuclease BN [Streptomyces pristinaespiralis ATCC 25486]
gi|197722262|gb|EDY66170.1| ribonuclease BN [Streptomyces pristinaespiralis ATCC 25486]
Length = 317
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 84/273 (30%), Gaps = 7/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
D+ DA F DG++ + ++ L+V PF + LA L TV V+
Sbjct: 34 DLFVDAFVRFRYADGFSHSRAVAFQMALAVVPFTIALVGLAATLHTESVGRTVELVLTRI 93
Query: 70 WPEVIAKPITDEILQVL-----AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P ++ I D + + + A + + + NR Y V
Sbjct: 94 APGASSRLIEDALAEGRRSAGANTGGAVAMWLGLGFAVVSLVSAMAQVERGANRIYGVER 153
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R + S + A + V VA F L +I
Sbjct: 154 DRPFTAKYGRSLFLSVAAGAPMAFGFLVLVAGDTIAQAAVDAFGGG-TLPGWWHWLQIPL 212
Query: 185 TMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ ++ + + P + G W+ L Y+ ++ +Y
Sbjct: 213 GITMAWVASAVIFRWSPRRVQPGYTWLAFGSAIHLALWIAATWLLALYVERSGSFGAVYG 272
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L + M L++ + GV LG A +
Sbjct: 273 PLTAFMALLLWANITGVALFLGLAFAAQLEAAR 305
>gi|189502450|ref|YP_001958167.1| hypothetical protein Aasi_1095 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497891|gb|ACE06438.1| hypothetical protein Aasi_1095 [Candidatus Amoebophilus asiaticus
5a2]
Length = 295
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 114/277 (41%), Gaps = 4/277 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I+ I + + D + ++ + L++FP +F L ++ + VP +ID
Sbjct: 19 ILLQIFKELWHRILANDILERSYAVAFNFTLAIFPATIFIFTLIPYISIPELVPKLIDFF 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR--VVE 124
PE I + I L+ GL + + + Y SSNG+ +L + N +
Sbjct: 79 KEGIPETIYGALAPTIQDTLSKHRSGLLSFGFIYSLYLSSNGIMSLIKNFNLVDQPMSHY 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIY 183
RS+ R I+ L + L + + L Y+ + + + I+
Sbjct: 139 KRSYLQQRAIATILTLALMLALFSSILLLIVARQILDYMVNYELITHKVHISILPFASSI 198
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
L FI + ++ P K IL G + + ++ ++ F++Y+ F Y +Y
Sbjct: 199 IVFLIFFIAIAGIYYLAPTNKQNRKFILIGALIATLGCLLASLAFSYYVNHFVKYG-LYG 257
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L ++ +++L++L + ++G ELN ++ K
Sbjct: 258 SLGVMIALMLWLFLLSLTLLIGFELNITLTRILGTSK 294
>gi|42521087|ref|NP_967002.1| ribonuclease BN family protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410828|gb|AAS14936.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 271
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 12/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + F + +Y A+ + DG A ++S LLS+FPF++ +A
Sbjct: 1 MPQKFYSIVYCLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLMAMASTFANFLDQY 60
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+A
Sbjct: 61 NIGWVFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKA 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+ + + R++S L+ ++ + + +P+ + + + +
Sbjct: 121 YKAPVSPPYILRRVLSILQFLVITLIITLTIVFSTLVPMLIDFSYQG----------LSY 170
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTY 238
R LF + +++ LP K + + PG I W + A F Y+ +F
Sbjct: 171 TRYLLIEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFGQL 230
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y L ++ L+F YML + FI GA+ N + + +
Sbjct: 231 DLIYGSLGGVVVSLLFFYMLSLIFIYGAKFNFQLKYFNESR 271
>gi|296393380|ref|YP_003658264.1| ribonuclease BN [Segniliparus rotundus DSM 44985]
gi|296180527|gb|ADG97433.1| ribonuclease BN [Segniliparus rotundus DSM 44985]
Length = 344
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 105/274 (38%), Gaps = 9/274 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVV 66
++ + E +A ++ + +LS+ P + G++ + V +
Sbjct: 9 RVLGRTLSMSWEHSIFAESAGAAFWQILSLTPMFLGLLGTLGYVCPWFGPGVLEDVQHKI 68
Query: 67 FGAWPEVIA-----KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ + I +L V A + + + S L + + S+ + A S+ RA+
Sbjct: 69 LSFAQQALSQKLVNEVIRPTLLAVTANGREAVTSFSFLLSLWAGSSAISAFVDSIVRAHD 128
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E+R R+ + ++ ++ + + P + R + + N
Sbjct: 129 QTELRHPVRQRIYALILYIVFLLSAMFALPILSVAPHQVTM-RLPIETHPLVSSVYNNLY 187
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+A+ + L + + ++PG + + ++ G Y+ ++
Sbjct: 188 GPGLFVAVALFLAWFYHIALPVPPPWHRLIPGALLAVMFFLAGRSGLLWYLNWVTSTGYT 247
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA+ + L+ + LG+ I GAELN+++ +
Sbjct: 248 YGALATPIALLLVAFFLGMAVIAGAELNSTVEHF 281
>gi|328676261|gb|AEB27131.1| Ribonuclease BN [Francisella cf. novicida Fx1]
Length = 398
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 102/276 (36%), Gaps = 10/276 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 68 SLQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + L+ + + + + + + + + +
Sbjct: 127 YANRQRPILQSLLVYWALMTMGPLLMGFVFISSTYLISMA--------WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y L+ I ++++++ +LGA + +M
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVMIRAMQYMK 274
>gi|118496801|ref|YP_897851.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
novicida U112]
gi|194324518|ref|ZP_03058290.1| putative ribonuclease BN-like family protein [Francisella
tularensis subsp. novicida FTE]
gi|208780585|ref|ZP_03247924.1| tRNA processing ribonuclease BN [Francisella novicida FTG]
gi|118422707|gb|ABK89097.1| tRNA processing ribonuclease BN [Francisella novicida U112]
gi|194321353|gb|EDX18839.1| putative ribonuclease BN-like family protein [Francisella
tularensis subsp. novicida FTE]
gi|208743560|gb|EDZ89865.1| tRNA processing ribonuclease BN [Francisella novicida FTG]
Length = 398
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 102/276 (36%), Gaps = 10/276 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 68 SLQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + L+ + + + + + + + + +
Sbjct: 127 YANRQRPILQSLLVYWALMTMGPLLMGFVFISSTYLISMA--------WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y L+ I ++++++ +LGA + +M
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVMIRAMQYMK 274
>gi|297587799|ref|ZP_06946443.1| YihY family protein [Finegoldia magna ATCC 53516]
gi|297574488|gb|EFH93208.1| YihY family protein [Finegoldia magna ATCC 53516]
Length = 285
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 107/271 (39%), Gaps = 8/271 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ E+ +++ + ++S+ PF++ N+ + A + +I
Sbjct: 13 FFKKLLQSIKEDQIPLLSAQTTYHFIMSLVPFLIVLLNIVLMVAASKL--DLIFKWMEVI 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + I +++ + + +IS L A + SS +++L ++N+A+ V +
Sbjct: 71 PSETRNILMTLINTIISNRSSSVLSISLLVALWSSSKALKSLIKAMNKAFDVRSENGFLK 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
T+L S + ++ + L++ L L + ++ R ++++
Sbjct: 131 TQLKSILFTVVLLLLLMVTLVFIAFGGLILNLIEQYMKIRIPYFA--QFFRYLIPIVSMI 188
Query: 191 IGLIFVHLFLPA----AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
G ++ F P K S + G I W++ +L++ Y+ S S Y L
Sbjct: 189 FGFTLLYKFAPDFDSTRSIKWKSAMLGGTIATIGWLLITLLYSFYVSNISNMSLTYGPLV 248
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ V++ + ++ AE+ A+
Sbjct: 249 GVFALFVWINLSSQIILISAEITANYDQVKR 279
>gi|291536120|emb|CBL09232.1| Predicted membrane protein [Roseburia intestinalis M50/1]
Length = 285
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 120/266 (45%), Gaps = 4/266 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + + + A ++ + +LS+ PF++ ++L + + T++
Sbjct: 2 IWKIIGNVMSFMGKCKRDKINAYSAQSAFFIILSLIPFLMVFSSLLQYTSVTE--GTLLK 59
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ PE IA + I +V + G+ +I+A+ A + ++ GV+ + LN + E
Sbjct: 60 IIERVMPEYIAPFLISLIDEVY-NRSAGIISITAIVAIWSAAKGVQYMTDGLNSVNDLEE 118
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+W + R+ + Y ++ V +V V V ++ P L + + ++ + R
Sbjct: 119 TRNWLVLRMWAVVYTVIFLVAIVFTLLVIVFGNSLQKLASQYIPLLRHAVDLLAHFRGLI 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L + + LP K S +PG ++W + ++ + Y+ F+ +S MY
Sbjct: 179 MLVMLIVFFDVIFTALPNKKLTFKSQIPGAAICGVAWYIFSIGVSIYVDYFNGFS-MYGS 237
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
L +I +++LY ++ AE+N
Sbjct: 238 LTTIALIMLWLYFCMYIMMMSAEVNV 263
>gi|324991565|gb|EGC23498.1| ribonuclease BN [Streptococcus sanguinis SK353]
Length = 302
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 56/277 (20%), Positives = 120/277 (43%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+++F + + + D + ++ L+SVFP ++ N+ + V
Sbjct: 7 KKFFAKIRRNQFLRAFFRFYRAADSELTSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 65 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y + R R++S L + + F+ + ++L ++R ++ L + +
Sbjct: 125 YGGAKSRGLISHRVMSLFVSLGLQILFALTLFLTMFGHMSLDFLRTYWKLDSQLYQHLQH 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+LF L+ ++ FLP K K +LPG F ++ + +F+ Y+ + +
Sbjct: 185 FTEPLIYASLFAVLVMLYYFLPNVKISKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNH 244
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + ++ I+GA LNAS+
Sbjct: 245 LVDVRFFSSIIMVVMMFWFIIIAKILIVGAVLNASIQ 281
>gi|328675353|gb|AEB28028.1| Ribonuclease BN [Francisella cf. novicida 3523]
Length = 398
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/276 (14%), Positives = 102/276 (36%), Gaps = 10/276 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ A +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFNAFSSLSE 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 68 SLQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIF 126
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + L+ + + + + + + + + +
Sbjct: 127 YANRQRPMLQSLLVYWALMTMGPLLMGFVFISSTYLISMA--------WFVKDIGMEQYL 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ L G V+ LP + L I + + +F Y+ TYS
Sbjct: 179 LSGLSLIFLTAGFFVVYKILPNTRINSQIALLAAFLVAIVFTLAKKIFALYMFYVPTYSV 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y L+ I ++++++ +LGA + +M
Sbjct: 239 IYGSLSLIPIFILWVFVTWQITLLGAVMIRAMQYMK 274
>gi|320546458|ref|ZP_08040773.1| YihY family protein [Streptococcus equinus ATCC 9812]
gi|320448843|gb|EFW89571.1| YihY family protein [Streptococcus equinus ATCC 9812]
Length = 305
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/274 (21%), Positives = 117/274 (42%), Gaps = 5/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + ++H+ + A ++ LL+ FP IV AN+ +L V ++ +
Sbjct: 16 WQPLQVYLKHYRSAEIDLSAIAVAYYLLLTAFPLIVIAANIFPYLNID--VNILLAFMKK 73
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + ++ + + + P+ + ++ L A + S + +L+ ++N+AY V + R
Sbjct: 74 NLPTNLYPSVSAITIDIFSKPSGSILGVATLTAFWTMSKSLTSLQKAINKAYGVAQHRDV 133
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I RL+ LL L + + + L + + + +I + T++
Sbjct: 134 VIGRLVGVIGSLLILFLLTFVLLFSTFLKVVLQIINSNYDLSDTMATVILHLSQPVTVIT 193
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ IGL+ ++ LP K ++ ILPG IFT + V LF+ YI+ S
Sbjct: 194 IVIGLMLLYFILPNVKIKRLRYILPGTIFTSVVIVFLNSLFSSYILRTFERMVDIKTFGS 253
Query: 248 IMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++ L ILGA NA+ K
Sbjct: 254 VVIFVLMLWFIFLAHILILGAIFNATYQEVRQGK 287
>gi|253997416|ref|YP_003049480.1| cyclic nucleotide-binding protein [Methylotenera mobilis JLW8]
gi|253984095|gb|ACT48953.1| cyclic nucleotide-binding protein [Methylotenera mobilis JLW8]
Length = 446
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 103/272 (37%), Gaps = 7/272 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTV 62
+ + ++ + F + +++ +S A+ ++ P ++ L + + +
Sbjct: 44 RYNTPLFVFHEMFKAFQRHNALGLSASLSFYAMFALIPLVLLMFFLLSQLIFSSDYAIVK 103
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ ++ + I E+ A + + + A+R + +
Sbjct: 104 LAIITSNLVPQFSNAIMTEVYST-AKHQVAWGALGLFILLWTVTPLASAMRAAFYSIASL 162
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
VE S+ ++ ++ + + +F + + + +V + N +
Sbjct: 163 VEAPSFVKRKIKDIFAIIGMLLLFFLFTFAGLMLEKVIIFVGASNHFIHNEVFTTLTSLG 222
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T+L +F A+ I I G +FT I W++ FT ++ +YS+++
Sbjct: 223 LTTLLISAFYFVFFP-----ARLYIKHIFIGALFTAILWLLMRPAFTLFLSMNESYSSIF 277
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ ++ + +LY+ F+LG EL A++
Sbjct: 278 GSMKNLFISITWLYVNFAVFLLGTELIATLRK 309
>gi|295676292|ref|YP_003604816.1| ribonuclease BN [Burkholderia sp. CCGE1002]
gi|295436135|gb|ADG15305.1| ribonuclease BN [Burkholderia sp. CCGE1002]
Length = 300
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 99/277 (35%), Gaps = 5/277 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVP 60
+ ++ DA F+ + + + I+ + S+ P ++ + G+ G
Sbjct: 12 PARWRRTINVASDAASRFLSDRCAMLGASIAFYSAFSLAPTLLLVLAVIGWIFGRDAAQG 71
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRA 119
+ + A+ + D + G+ +LA +S +L +L+
Sbjct: 72 RLFEQARQLVGNDAARAMQDIVAHAHYAGGSGVAAAFSLALLLVGASATFSSLNTALDIV 131
Query: 120 YRVVEMRSWYITRL--ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + L + + + L + V + + A+ + L ++
Sbjct: 132 FAAHPRKGIAGLALLVRARLVSIGLLIGLSFLLVVSLVVDAAIQTLGGALFGNSALGIVA 191
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + L +GL + +LP A L G + + G LF+ Y+V T
Sbjct: 192 DVLQSLLGFVILAVGLGALIKWLPDAAVPFRPALVGGAIASLLFTAGRHLFSFYLVHAGT 251
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++ S+ +++LY F+ GAE+ AS+
Sbjct: 252 AG-VFGAAGSLAVLMMWLYFCAAVFLFGAEVAASLCR 287
>gi|291527064|emb|CBK92650.1| Predicted membrane protein [Eubacterium rectale M104/1]
Length = 320
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/226 (20%), Positives = 97/226 (42%), Gaps = 2/226 (0%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ PE + D +V A L + A Y SS + ++
Sbjct: 93 PLTEADFLMWASSFIPESFGDIMKDLASEVYASGTGRLSIT-MITAVYLSSKAFISFQLG 151
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLL 174
L+ Y V E R++ + R+ S Y ++ ++ L+ + + V + Y +G+++
Sbjct: 152 LDDMYHVKENRNFILRRIYSVLYSIVFALALIFLLGIMVFGNMLRKMYFSNVHHIIGSII 211
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + R+ + L + +++FLP K + LPG +F +W++ + +F+ Y+
Sbjct: 212 GSVVDYRLVICLPVLILFFWVIYVFLPNKKQRAKYQLPGAVFAAAAWMIFSGIFSVYVDK 271
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ YS+ Y + +I +V+LY +G +N + KK
Sbjct: 272 YNNYSSFYGTMTTIALIMVWLYGCMYVLFIGGIINRTWEERMEAKK 317
>gi|225677100|ref|ZP_03788102.1| ribonuclease, BN family [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590859|gb|EEH12084.1| ribonuclease, BN family [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 271
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 61/281 (21%), Positives = 127/281 (45%), Gaps = 13/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++++ IV+ +Y A+ + DG A ++S LLS+FPF++ +A
Sbjct: 2 LQKFYSIVY-CLYRALIDTIHNDGVEHAGYLSFLILLSIFPFLIVLMAVASTFANFLDQY 60
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + P+ I + I ++++ P + L T++ + A + +S+ +E LR LN+A
Sbjct: 61 NIGWVFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKA 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+V + + R++S L+ ++ + + +P+ + + + +
Sbjct: 121 YKVPVSPPYILRRVLSILQFLVITLIITLTIVFSTLVPMLIDFSYQG----------LSY 170
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTY 238
R LF + +++ LP K + + PG I W + A F Y+ +F
Sbjct: 171 TRYLLIEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQL 230
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y L ++ L+F YML + FI GA+ N + + +
Sbjct: 231 DLIYGSLGGVVVSLLFFYMLSLIFIYGAKFNFQLKYFNGSR 271
>gi|56707375|ref|YP_169271.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110669845|ref|YP_666402.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis FSC198]
gi|134302683|ref|YP_001122651.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis WY96-3418]
gi|187932228|ref|YP_001892213.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
mediasiatica FSC147]
gi|224456443|ref|ZP_03664916.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254368406|ref|ZP_04984423.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica FSC022]
gi|254370924|ref|ZP_04986929.1| BN family tRNA processing ribonuclease [Francisella tularensis
subsp. tularensis FSC033]
gi|254874209|ref|ZP_05246919.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56603867|emb|CAG44846.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320178|emb|CAL08229.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis FSC198]
gi|134050460|gb|ABO47531.1| ribonuclease BN-like family protein [Francisella tularensis subsp.
tularensis WY96-3418]
gi|151569167|gb|EDN34821.1| BN family tRNA processing ribonuclease [Francisella tularensis
subsp. tularensis FSC033]
gi|157121300|gb|EDO65501.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica FSC022]
gi|187713137|gb|ACD31434.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254840208|gb|EET18644.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282158507|gb|ADA77898.1| ribonuclease BN-like family protein [Francisella tularensis subsp.
tularensis NE061598]
Length = 395
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 100/275 (36%), Gaps = 11/275 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFS--SLSES 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 66 LQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIFY 124
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + L+ + + + + + + + + +
Sbjct: 125 ANRQRPILQSLLVYWALMTMGPLLMGFVFISSTYLISMA--------WFVKDIGMEQYLL 176
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ L G V+ LP + L I + + +F Y+ TYS +
Sbjct: 177 SGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSVI 236
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L+ I ++++++ +LGA + +M
Sbjct: 237 YGSLSLIPIFILWVFVTWQITLLGAVMIRAMQYMK 271
>gi|73667122|ref|YP_303138.1| ribonuclease BN [Ehrlichia canis str. Jake]
gi|72394263|gb|AAZ68540.1| Ribonuclease BN [Ehrlichia canis str. Jake]
Length = 279
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 16/276 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AH 56
+ +Y A+ V+ DG A ++S LLS+FPF+VF L +
Sbjct: 4 KVARCFIKCVYYAMVDMVKHDGIEHAGYLSFIILLSIFPFLVFLMALVSNVAQLLNYYDI 63
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+I ++ P I I I ++++ P L T++ + + SS+ VE +R L
Sbjct: 64 SISEKLILLINDNVPSEIISGIMPRIQEIISGPPHSLLTLAIIGTVWTSSSAVEGIRTIL 123
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N+AYRV S+ RL+S L+ +VT+ I + +P+ + +
Sbjct: 124 NKAYRVSSPPSYIFRRLLSIFQFLMITVTITIAMVSIILLPVIYEMLDRN---------- 173
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + L LF + ++ +P K +++++PG + W + +FT YI TF
Sbjct: 174 LAYFKYAISELMLFTSITLLYFIVPNIKQNLINVVPGAMLVTFLWTCSSFVFTWYIKTFQ 233
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+ +Y LA I+ L+F Y+L +FFI GAE N +
Sbjct: 234 QLNIIYGSLAGIIASLLFFYILSIFFIYGAEFNYRL 269
>gi|254820253|ref|ZP_05225254.1| hypothetical protein MintA_10011 [Mycobacterium intracellulare ATCC
13950]
Length = 345
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 93/271 (34%), Gaps = 9/271 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
D + A + F E +G A+ ++ + ++FP ++ G + GF+ A + T+ D
Sbjct: 19 WLDHVIRAYQRFDERNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARRPHLLSTIDDH 78
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR--VV 123
+ + + + + + + I + A + + LR +L + V
Sbjct: 79 IRSQVSGTLGNQLQELMNSAIDA-RTSVGVIGLVTAVWAGLGWISHLRQALTEMWWDSHV 137
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNG 180
E + ++ ++ ++ + A + + + W
Sbjct: 138 ESPGFVRSKFSDLLAMVGTFAVILATVALTTVGHAAPMAALLKWLGVPQFAVFDWLFWLF 197
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I L ++ ++ LP K + + + + + V + + Y+ T S
Sbjct: 198 SILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAVGFEVFKQVGSIYLKTVL-RSP 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ +VF Y+ + A+
Sbjct: 257 AGAAFGPVLGLMVFAYITAYLVLFCTAWGAT 287
>gi|255323935|ref|ZP_05365061.1| YihY family protein [Corynebacterium tuberculostearicum SK141]
gi|255299115|gb|EET78406.1| YihY family protein [Corynebacterium tuberculostearicum SK141]
Length = 359
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 100/281 (35%), Gaps = 9/281 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV--FGANLAGFLGAHQFVPTVIDV 65
D + E + E G A+ I+ ++LS+FP + A + +
Sbjct: 37 FVDHLMRMNERYGAEGGNQFAAGITYYSVLSIFPLAMLVVATVAAVLANREDLLNDLQSH 96
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--V 123
+ + + + + + + +F I L + + LRI ++ + +
Sbjct: 97 ITSSIDGDMGDTVNEILDTAID-QRGAMFGIGGLTTLWSGLGWMNNLRIGISAMWGIDAN 155
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNG 180
E S+ +L ++ V +I V A L + + +I+
Sbjct: 156 EGGSFLKKKLSDLVGLIGLIVAFLIAFGVTAAGSSGLTQKIFERVGIESFPGMDSVIFFV 215
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +LA I + ++ + LP K S L G +++ + L + I++ +T S
Sbjct: 216 GLAVGLLANLIVMWWLIMILPRTKVPKKSGLIGAAIGAVAFELLKQL-STLIMSSATGSP 274
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A ++ +V +Y++ + + A+ P
Sbjct: 275 AGAVFGPVIVLMVVMYLIWRVVLYVSAWTATTAESLKYAHP 315
>gi|91776668|ref|YP_546424.1| cyclic nucleotide-binding domain-containing protein
[Methylobacillus flagellatus KT]
gi|91710655|gb|ABE50583.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Methylobacillus
flagellatus KT]
Length = 428
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 91/264 (34%), Gaps = 7/264 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + F ++ + + F +G+ M++ +S A+ ++ P IV L L T
Sbjct: 26 RHRYSTPFFVLRETLNSFQVHNGFGMSASLSFYAMFALIPLIVLMFFLLSHLVVSSNSAT 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V + + + + +A + + ALR +
Sbjct: 86 VKLAIIVSNLVPNLSNRIMVEVYNASQHKAAWGVFGFIAMFWLAVPLAGALRSAFYTIAG 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V E S+ ++ VL + + + + + I + + + I
Sbjct: 146 VQEKPSFMRRQIKDILGVLGILLMFFLFTILGLGIEKVMHVLEPHTSYSRYINSAI---- 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + + + + + I+ G T + W+ F+ ++ Y +
Sbjct: 202 ---SIALTTLLIAMFYRVYFPLRLQHSHIVIGAAITALLWLAMRPAFSLFLSINPAYGAV 258
Query: 242 YAGLASIMTCLVFLYMLGVFFILG 265
+ G+ ++ + +LY V F+LG
Sbjct: 259 FGGMKNLFISIAWLYYTFVVFMLG 282
>gi|291539020|emb|CBL12131.1| Predicted membrane protein [Roseburia intestinalis XB6B4]
Length = 285
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/266 (19%), Positives = 119/266 (44%), Gaps = 4/266 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + + + A ++ + +LS+ PF++ ++L + + T++
Sbjct: 2 IWKIIGNVMSFMGKCKRDKINAYSAQSAFFIILSLIPFLMVFSSLLQYTSVTE--GTLLK 59
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ PE IA + I +V + G+ +I+A+ A + ++ GV+ + LN + E
Sbjct: 60 IIERVMPEYIAPFLISLIDEVY-NRSAGIISITAIVAIWSAAKGVQYMTDGLNSVNDLEE 118
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R+W + R+ + Y ++ V +V V V ++ P L + + ++ + R
Sbjct: 119 TRNWLVLRMWAVVYTVIFLVAIVFTLLVIVFGNSLQKLASQYIPLLRHAVDLLAHFRGLI 178
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L + + LP K S +PG ++W + ++ + Y+ F+ +S MY
Sbjct: 179 MLAMLIVFFDVIFTALPNKKLTFKSQIPGAAICGVAWYIFSIGVSIYVDYFNGFS-MYGS 237
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
L +I +++LY ++ AE+N
Sbjct: 238 LTTIALIMLWLYFCMYIMMMSAEVNV 263
>gi|325478532|gb|EGC81644.1| YihY family protein [Anaerococcus prevotii ACS-065-V-Col13]
Length = 324
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/291 (15%), Positives = 106/291 (36%), Gaps = 20/291 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ I + + D ++ +S L + P ++ + + +I
Sbjct: 6 KDFKNFILNLLNRISRHDITTYSAALSFYLLQASIPLMMVLVTVLSYFL--AGKEDIIFK 63
Query: 66 VFGAWPEVIAKPITDEILQV-LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
P +K I D I + ++ + + T++ L A + +++G+ L ++N AY +
Sbjct: 64 FVDFLPNTTSKLIVDAINILLVSSQSPTVTTLTILFALWSATSGINKLINAINHAYGLHN 123
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--------------AL 170
+ RL+S + L+ +V + + +
Sbjct: 124 NKQAIKQRLMSIIFTLVFIFLIVFLLVFQIYGSSIIGIFNSQIIEKITVHFNTNIQSALD 183
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLP---AAKSKIMSILPGVIFTWISWVVGAVL 227
+ L + + + + + P + + G +F I+ + +
Sbjct: 184 MISSPLFKLFSYTVPFLIMALAVGLFYKYSPSNSKNRIRNREAFLGGLFVSIAISLATFI 243
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++++I FS S +Y LA I+ ++L ++ + ILGAE A+ Y +
Sbjct: 244 YSYFINNFSNQSLVYGALAGILALFIWLLIVSIILILGAECIAAYREGYKK 294
>gi|292486601|ref|YP_003529469.1| inner membrane protein YhjD [Erwinia amylovora CFBP1430]
gi|292897838|ref|YP_003537207.1| membrane protein [Erwinia amylovora ATCC 49946]
gi|291197686|emb|CBJ44781.1| putative membrane protein [Erwinia amylovora ATCC 49946]
gi|291552016|emb|CBA19053.1| Inner membrane protein yhjD [Erwinia amylovora CFBP1430]
Length = 340
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 90/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A E F + G + I+ + LS+ P ++ GF+ + +I +
Sbjct: 52 HFLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTELIGKIVS 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + L A Y + + LR ++ R V R
Sbjct: 112 NISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERAP 171
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+ F ++ + L+I + A A + + + L ++
Sbjct: 172 QDQEKIWFKYSRDFISLIGLVLALIITLSLTSIAGAAQASIVRALGLENIEWLRPVMTLI 231
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 232 ALSISIFANYLLFLWIFWILPRHKPRKRALFRGTLLAAIGFEAIKFIMTLTLPELAS-SP 290
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 291 SGAAFGSVLGLMAFFYFFARLILFCAAWIAT 321
>gi|312170661|emb|CBX78924.1| Inner membrane protein yhjD [Erwinia amylovora ATCC BAA-2158]
Length = 340
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/271 (14%), Positives = 90/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A E F + G + I+ + LS+ P ++ GF+ + +I +
Sbjct: 52 HFLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTELIGKIVS 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + L A Y + + LR ++ R V R
Sbjct: 112 NISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERAP 171
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+ F ++ + L+I + A A + + + L ++
Sbjct: 172 QDQEKIWFKYSRDFISLIGLVLALIITLSLTSIAGAAQASIVRALGLENIEWLRPVMTLI 231
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 232 ALSISIFANYLLFLWIFWILPRHKPRKRALFRGTLLAAIGFEAIKFIMTLTLPELAS-SP 290
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 291 SGAAFGSVLGLMAFFYFFARLILFCAAWIAT 321
>gi|297538920|ref|YP_003674689.1| ribonuclease BN [Methylotenera sp. 301]
gi|297258267|gb|ADI30112.1| ribonuclease BN [Methylotenera sp. 301]
Length = 307
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 102/279 (36%), Gaps = 5/279 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPT 61
++ V I D+ ++ G + + ++ AL S+ P ++ + G F G
Sbjct: 2 KFLKAVVGIFIDSFSSWIIHRGASKGAALAFYALFSLAPILILTIAVTGFFFGDEAAQGQ 61
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAY 120
+I + A I + L T+ A+ +++ L+ SL+ +
Sbjct: 62 IIHQIENLVGHNGAVAIQAILAAARDPVGGQLTTVVAIGLLLIGATSVFTELKGSLDELW 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIW 178
V + ++ L+ + V ++ + + AL V + + G+ L+
Sbjct: 122 GVPKSELSAMSILLRTRLLSFGLVLVLAFLLLISLVVSALLSVFEQYVGSLWGSSALLFT 181
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + ++ LP + + G +FT + +G L YI S
Sbjct: 182 TLTSFVSFCVIACLFAVIYKMLPDERLSWQDVAIGSMFTACLFTLGKYLIGLYIGK-SAV 240
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ + S++ L+++Y LGAE + +
Sbjct: 241 ASSFGAAGSVIAILLWVYYSAQILFLGAEFTRQYALRFG 279
>gi|152978026|ref|YP_001343655.1| ribonuclease BN [Actinobacillus succinogenes 130Z]
gi|171472942|sp|A6VL73|Y342_ACTSZ RecName: Full=UPF0761 membrane protein Asuc_0342
gi|150839749|gb|ABR73720.1| putative ribonuclease BN [Actinobacillus succinogenes 130Z]
Length = 287
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 101/274 (36%), Gaps = 7/274 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ F ++ F + A ++ S +L++ P I+ ++ V
Sbjct: 1 MKTAFTPFASFGKIFLQRFGQNKLLLEAGALTYSTMLAIVPLIMVIFSIFSAFPIFNDVT 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ A + + + +K + + ++ + + ++ SLN +
Sbjct: 61 GVLKEFIFTNFAPSASDVVGQYIDQFVQNSKKMSAVGIISLIVVALMLINSIDNSLNGIW 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + + + + L + V ++ L+L P LL
Sbjct: 121 RTPKRGTLFSFAVYWTILTLGPIIMGVSIAISTYVTNLSLFRGELNLPFGIKLLG----- 175
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + ++ ++ +P K I G + + + +G F YI TF +Y
Sbjct: 176 --FVPFILTWLSFTLIYAIVPNKKINIKHAAAGALVAAVFFTLGKKAFMWYITTFPSYQL 233
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y +A++ L++L + +F +LGA+L A +
Sbjct: 234 IYGAMATLPLMLLWLQLSWLFILLGAQLAAVLDE 267
>gi|317050030|ref|YP_004117678.1| ribonuclease [Pantoea sp. At-9b]
gi|316951647|gb|ADU71122.1| ribonuclease [Pantoea sp. At-9b]
Length = 335
Score = 104 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 96/281 (34%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A+E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 50 HFLRALERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTELINKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + L A Y N + LR ++ R V R
Sbjct: 110 SISDPNLANTLKNTVNTAIQQRATVGLTGLLLALYSGINWMGNLREAIRAQSRDVWERKP 169
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWNG 180
++ + F + + LVI + A A + + L +
Sbjct: 170 DDQEKFWKKYIRDFISLTGLMLALVITLSLTSVAGAAQAAIVQALGLDHIEWLRPALTII 229
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K + ++ G + I + V + T + +T S
Sbjct: 230 TLIISIFANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEVIKFVMTITLPKLAT-SP 288
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ ++ P
Sbjct: 289 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATARYKDDKEMP 329
>gi|89257180|ref|YP_514542.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica LVS]
gi|115315516|ref|YP_764239.1| BN family tRNA processing ribonuclease [Francisella tularensis
subsp. holarctica OSU18]
gi|156503417|ref|YP_001429482.1| YihY family membrane protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|167010954|ref|ZP_02275885.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica FSC200]
gi|254366898|ref|ZP_04982935.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica 257]
gi|290953259|ref|ZP_06557880.1| YihY family membrane protein [Francisella tularensis subsp.
holarctica URFT1]
gi|295313524|ref|ZP_06804118.1| YihY family membrane protein [Francisella tularensis subsp.
holarctica URFT1]
gi|89145011|emb|CAJ80380.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica LVS]
gi|115130415|gb|ABI83602.1| BN family tRNA processing ribonuclease [Francisella tularensis
subsp. holarctica OSU18]
gi|134252725|gb|EBA51819.1| tRNA processing ribonuclease BN [Francisella tularensis subsp.
holarctica 257]
gi|156254020|gb|ABU62526.1| YihY family membrane protein [Francisella tularensis subsp.
holarctica FTNF002-00]
Length = 395
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 100/275 (36%), Gaps = 11/275 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++Y I+ + + ++ +D +A+ I+L++L ++ P N+ +
Sbjct: 8 KKYLLILKNYWIWVFKEYLRKDCPTVAASITLTSLFAIVPAFFIIINILDAFS--SLSES 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + +F A + I ++ + L S + ++ L I+LN+ +
Sbjct: 66 LQNFLFENMLPETATTVQQYITKI-SHKMTSLPITSVIVLLVVIFLMIKRLEITLNKIFY 124
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + L+ + + + + + + + + +
Sbjct: 125 ANRQRPILQSLLVYWALMTMGPLLMGFVFISSTYLISMA--------WFVKDIGMEQYLL 176
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+++ L G V+ LP + L I + + +F Y+ TYS +
Sbjct: 177 SGLSLIFLTAGFFVVYKILPNTRINSKIALLAAFLVAIVFTLAKKIFALYMFYVPTYSVI 236
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L+ I ++++++ +LGA + +M
Sbjct: 237 YGSLSLIPIFILWVFVTWQITLLGAVMIRAMQYMK 271
>gi|188532262|ref|YP_001906059.1| Predicted membrane protein [Erwinia tasmaniensis Et1/99]
gi|188027304|emb|CAO95147.1| Predicted membrane protein [Erwinia tasmaniensis Et1/99]
Length = 334
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 91/271 (33%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 52 HFLRAGERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLTELINKIVS 111
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + L A Y + + LR ++ R V R+
Sbjct: 112 NISDPSLASTLKNTVNTAIQQRTTVGLTGLLVALYSGISWMGNLREAIRAQSRDVWERTP 171
Query: 129 ------YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+ F ++ + L++ + A A + + + L +
Sbjct: 172 QDQEKVWFKYTRDFISLIGLLLALIVTLSLTSIAGAAQASIVRALGLENIEWLRPAMTTI 231
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K + ++ G + I + + T + ++ S
Sbjct: 232 ALSISIFANYLLFLWIFWILPRHKPRKKALFRGTLLAAIGFEAIKFIMTLTLPKLAS-SP 290
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 291 SGAAFGSVLGLMAFFYFFARLILFCAAWIAT 321
>gi|319787952|ref|YP_004147427.1| ribonuclease BN [Pseudoxanthomonas suwonensis 11-1]
gi|317466464|gb|ADV28196.1| ribonuclease BN [Pseudoxanthomonas suwonensis 11-1]
Length = 423
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/269 (14%), Positives = 92/269 (34%), Gaps = 8/269 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFG 68
FV++ + A+ ++ + ++ P V + ++D VF
Sbjct: 22 SFARFLWHRFVDDRLFQAAAALAYTTAFALVPLAVVVLGVLAAFPVFDQWSNALVDYVFS 81
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ A+ I + ++ + L +A + ++ + NR +RV R
Sbjct: 82 NFVPSAARAIESSLDRLAENSRQ-LTAAGVVALVVSLLVTLNSVESTFNRIWRVASARPR 140
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L+ + + L ++ + I + I A +L
Sbjct: 141 LSRYLVYWTVLTLGALLAAASLSISARIFALPLFATP------EGRAIAHLSLSLAPVLI 194
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ V+ +P K L G + + Y+ +F Y +Y LA +
Sbjct: 195 ELAVVALVYKVVPHHTVKWRHALAGAVLAVLVLETVKAGLGVYLGSFQGYQKLYGALAFV 254
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYW 277
++++Y+ + +LGA L +S+ + +
Sbjct: 255 PILMLWIYLGWIAILLGASLASSLAAFRY 283
>gi|227502786|ref|ZP_03932835.1| ribonuclease [Corynebacterium accolens ATCC 49725]
gi|227076516|gb|EEI14479.1| ribonuclease [Corynebacterium accolens ATCC 49725]
Length = 358
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 101/286 (35%), Gaps = 9/286 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVP 60
+ D + E + E G ++ I+ ++LS+FP + + +
Sbjct: 31 RRKSPMVDHLMRMQERYAAEGGNQFSAGITYYSVLSIFPLAMLLVATIAAVLANREDLLN 90
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + +++ + + + + + +F I L + + LRI ++ +
Sbjct: 91 DLQSYITDSIDGNLSESVNEILDKAID-QRGAMFGIGGLTTLWSGLGWMNHLRIGISAMW 149
Query: 121 RV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--- 175
+ + S+ + ++ V V+ V A L + +
Sbjct: 150 GIDANDGGSFLKKKFSDLLGLIGLIVAFVVAFGVTAAGSSGLTQKVFDLLGIDSFPGMGY 209
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + ++A FI + ++ + LP K S G +++ L + I++
Sbjct: 210 VFFFSGLLLGLIANFIVMWWLIMILPRTKVPKKSGFIGAAIGAVAFEAIKQL-STVIMSS 268
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+T S A ++ ++ +Y++ + + A+ P
Sbjct: 269 ATGSPAGAVFGPVIVLMIVMYLVWRVVLYISAWTATTAESLKYAHP 314
>gi|194291492|ref|YP_002007399.1| ribonuclease; ribonuclease bn family [Cupriavidus taiwanensis LMG
19424]
gi|193225396|emb|CAQ71342.1| putative ribonuclease; ribonuclease BN family [Cupriavidus
taiwanensis LMG 19424]
Length = 301
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 101/280 (36%), Gaps = 4/280 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ + F G +A ++ ALLS+ P ++ + + + + +
Sbjct: 12 LRHPLRFAWYTLRQFRANQGLLLAGAVAYYALLSIVPLLILMVIALSHVIEPELLLSTLA 71
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV- 123
A+ + E+ L + + +FSS L +++ +
Sbjct: 72 RYLEWIVPGQARALVTELAGFLRN-RGTIGWVLLGTMLFFSSLAFTVLENAMSVIFEHRV 130
Query: 124 --EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + ++ L+ + Y+ + S+ L++++ V A+ + +L +
Sbjct: 131 AIRRRHFLVSALLPYCYIAVLSIGLLLVTVVSGALLAIGERHVEVLGHDWSLDRLSTGLL 190
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + L +++ +P + + L G + + W + + Y T S +
Sbjct: 191 YLLGFIGEVLMLTSIYMVMPVGRLSLRHALSGAVIAAVLWEISRHVLVWYFTTLSQVGRV 250
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y L + + L+ L + +LGA++ A W K P
Sbjct: 251 YGSLTTAIVVLLSLEIAATLLLLGAQVIAEFERGAWHKLP 290
>gi|238923938|ref|YP_002937454.1| hypothetical protein EUBREC_1576 [Eubacterium rectale ATCC 33656]
gi|238875613|gb|ACR75320.1| hypothetical protein EUBREC_1576 [Eubacterium rectale ATCC 33656]
Length = 320
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/226 (20%), Positives = 97/226 (42%), Gaps = 2/226 (0%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ PE + D +V A L + A Y SS + ++
Sbjct: 93 PLTEADFLMWASSFIPESFGDIMKDLASEVYASGTGRLSIT-MITAVYLSSKAFISFQLG 151
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLL 174
L+ Y V E R++ + R+ S Y ++ ++ L+ + V V + Y +G+++
Sbjct: 152 LDDMYHVKENRNFILRRIYSVLYSIVFALALIFLLGVMVFGNMLRKMYFSNVHHIIGSII 211
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ + R+ + L + +++FLP K + LPG +F +W++ + +F+ Y+
Sbjct: 212 GSVVDYRLVICLPVLILFFWVIYVFLPNKKRRAKYQLPGAVFAAAAWMIFSGIFSVYVDK 271
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ YS+ Y + +I +V+LY +G +N + KK
Sbjct: 272 YNNYSSFYGTMTTIALIMVWLYGCMYVLFIGGIINRTWEERMEAKK 317
>gi|86742177|ref|YP_482577.1| ribonuclease BN [Frankia sp. CcI3]
gi|86569039|gb|ABD12848.1| ribonuclease BN [Frankia sp. CcI3]
Length = 342
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 9/275 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
I + +A+ LLS+ P ++ G++G +
Sbjct: 56 RTITNAWRHRVLGLAAEAGFWQLLSLPPLLLSLLGTLGYVGDAIGADALDSARQSILHGA 115
Query: 74 IA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ I Q+L+ + +I + + + S + ++ AY E+
Sbjct: 116 GGLLTESVVDDAVRPTIDQILSRGRPDVISIGFVLSLWTGSTAMATFVNTITIAYGQREL 175
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
RS +RL++ L + VI+ V P ++ + + +I
Sbjct: 176 RSAVRSRLLALWLFLAQVASGVILLPALVLGPELISRIFD-ASRHPLVSTLITLLYWPVV 234
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L ++ + LPG I + W+VG+ + +Y+ ++ +Y L
Sbjct: 235 GLVALAMLTSLYHLSLPVRRPWWRALPGAILALVCWLVGSGVLRYYLEIVFSHELVYGSL 294
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S + L+F Y+ + +LGAELNA++ R++
Sbjct: 295 GSPVAALLFFYITALAVLLGAELNAALDEQPPRRR 329
>gi|327474796|gb|EGF20201.1| ribonuclease BN [Streptococcus sanguinis SK408]
gi|332362522|gb|EGJ40322.1| ribonuclease BN [Streptococcus sanguinis SK1056]
Length = 302
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/277 (20%), Positives = 121/277 (43%), Gaps = 7/277 (2%)
Query: 2 REYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+++F + + + D + ++ L+SVFP ++ N+ + V
Sbjct: 7 KKFFAKIRRNQFLRAFFRFYRAADSELTSVAVAYYWLISVFPLLLIVVNILPYFHIP--V 64
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + PE + + + +VL P+ GL + S L+A + S + L+I+ N+A
Sbjct: 65 ADFLTAIKDMLPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQIAFNKA 124
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y V + R R++S L + + F+ + ++L ++R ++ L + +
Sbjct: 125 YGVAKSRGLISHRVMSLFVSLGLQILFALALFLTMFGHMSLDFLRTYWKLDNQLYQHLQH 184
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
LF L+ ++ FLP K K +LPG F +++ + +F+ Y+ + +
Sbjct: 185 FTEPLIYALLFAVLVMLYFFLPNVKINKKRYVLPGSAFVFLTILALLNIFSVYMDNYLNH 244
Query: 239 STMYAGLASIM--TCLVFLYMLGVFFILGAELNASMI 273
+SI+ + + M+ I+GA LNAS+
Sbjct: 245 LVDVRFFSSIIMVVMMFWFIMIAKILIVGAVLNASIQ 281
>gi|297171232|gb|ADI22240.1| predicted membrane protein [uncultured Gemmatimonadales bacterium
HF0200_34B24]
Length = 228
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/224 (16%), Positives = 76/224 (33%), Gaps = 9/224 (4%)
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ +F + I I Q +A K + + A + + ++ +L
Sbjct: 4 DVSIQLRHFIFANFLPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYSIDSAL 62
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N +R R + + + + L + + + +L +
Sbjct: 63 NTIWRSKRARPKIYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTV 114
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I N +L +I ++ +P + + G + + G F YI F
Sbjct: 115 IDNVLRIFPLLLSWISFWLLYSIVPTIRVPNRDAIVGAFVAALLFEAGKKGFALYITMFP 174
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 175 SYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 218
>gi|294815735|ref|ZP_06774378.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294328334|gb|EFG09977.1| Integral membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 407
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 102/274 (37%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 34 WLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLMLGLLGLLGYIDDWTNTTTVASIEQN 93
Query: 69 AWPE--------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + V L +I A + S V ++ Y
Sbjct: 94 ILNAAGTVLSERGVNDVARPLLEDVTHGGRPDLISIGFAIALWSGSRAVNVFIDTITVMY 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F L+A V ++ + V P + + ++
Sbjct: 154 GLDGRRGIVATRLLAFLLYLIALVIGAVVLPLAVVGP------DRVVEWVPWGTTLVTVL 207
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S + +PG + WV+G+ L Y+V+ T
Sbjct: 208 YWPVVILLSVAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLVSTVEGPT 267
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 268 IYGSLAAPIAVLLWIGISAFAILVGAAVNAAIDR 301
>gi|116491549|ref|YP_811093.1| ribonuclease BN-like family protein [Oenococcus oeni PSU-1]
gi|290891155|ref|ZP_06554217.1| hypothetical protein AWRIB429_1607 [Oenococcus oeni AWRIB429]
gi|116092274|gb|ABJ57428.1| Ribonuclease BN-like family enzyme [Oenococcus oeni PSU-1]
gi|290479119|gb|EFD87781.1| hypothetical protein AWRIB429_1607 [Oenococcus oeni AWRIB429]
Length = 282
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/220 (21%), Positives = 97/220 (44%)
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V T+++ + P ++ I I L + +I L + +S + LR N+
Sbjct: 59 VRTILNYIIQITPSDMSNIIKPIINSFLTNGSNSSLSIGILVTIWSASGLIATLRRCFNQ 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y ++ ++R++SF +LLA + ++ + + L ++ F L +
Sbjct: 119 IYNSSSKQNAIVSRILSFILLLLAFLLFALLLSIMLFGQYLLKLLKNNFGTSLGWLTSLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ LF LI ++ F+P AK K + G +FT + W++ A F Y+ F+
Sbjct: 179 GAKNLIGLVGLFSLLILIYYFVPQAKIKWRYVWIGAVFTSLGWLLLAQGFQLYVEYFAQR 238
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ Y + S + + +L ++G +NAS Y+ +
Sbjct: 239 VSSYQTIGSFILLMFWLNFSSSIILIGGVINASCQNYFEK 278
>gi|306835375|ref|ZP_07468396.1| multiple transmembrane domain protein [Corynebacterium accolens
ATCC 49726]
gi|304568741|gb|EFM44285.1| multiple transmembrane domain protein [Corynebacterium accolens
ATCC 49726]
Length = 359
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 100/286 (34%), Gaps = 9/286 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVP 60
+ D + E + E G ++ I+ ++LS+FP + + +
Sbjct: 32 RRKSPMVDHLMRMQERYAAEGGNQFSAGITYYSVLSIFPLAMLLVATIAAVLANREDLLN 91
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + +++ + + + + +F I L + + LRI ++ +
Sbjct: 92 DLQSYITDSIDGNLSESVNEILDTAID-QRGAMFGIGGLTTLWSGLGWMNHLRIGISAMW 150
Query: 121 RV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--- 175
+ + S+ + ++ V V+ V A L + +
Sbjct: 151 GIDANDGGSFLKKKFSDLLGLIGLIVAFVVAFGVTAAGSSGLTQKVFDLLGIDSFPGMGY 210
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + ++A FI + ++ + LP K S G +++ L + I++
Sbjct: 211 VFFFSGLLLGLIANFIVMWWLIMILPRTKVPKKSGFIGAAIGAVAFEAIKQL-STVIMSS 269
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+T S A ++ ++ +Y++ + + A+ P
Sbjct: 270 ATGSPAGAVFGPVIVLMIVMYLVWRVVLYISAWTATTAESLKYAHP 315
>gi|238761244|ref|ZP_04622221.1| Inner membrane protein yhjD [Yersinia kristensenii ATCC 33638]
gi|238761497|ref|ZP_04622473.1| Inner membrane protein yhjD [Yersinia kristensenii ATCC 33638]
gi|238700471|gb|EEP93212.1| Inner membrane protein yhjD [Yersinia kristensenii ATCC 33638]
gi|238700724|gb|EEP93464.1| Inner membrane protein yhjD [Yersinia kristensenii ATCC 33638]
Length = 329
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F + + L+I + A + + + L ++
Sbjct: 161 QDQEKFYYRYARDFISLTGLVIALIITLSLTSIAGAAQSAIVNALGLGGIEWLRPVMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 ALSISIAANYLLFLWIFWILPRHKPKKKALLRGSLIAAIGFEIIKFVMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 310
>gi|311739949|ref|ZP_07713783.1| multiple transmembrane domain protein [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311305022|gb|EFQ81091.1| multiple transmembrane domain protein [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 359
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 100/281 (35%), Gaps = 9/281 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV--FGANLAGFLGAHQFVPTVIDV 65
D + E + E G A+ I+ ++LS+FP + A + +
Sbjct: 37 FVDHLMRMNERYGAEGGNQFAAGITYYSVLSIFPLAMLVVATVAAVLANREDLLNDLQSH 96
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--V 123
+ + + + + + + +F I L + + LRI ++ + +
Sbjct: 97 ITSSIDGDMGDTVNEILDTAID-QRGAMFGIGGLTTLWSGLGWMNNLRIGISAMWGIDAN 155
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNG 180
E S+ +L ++ V +I V A L + + +I+
Sbjct: 156 EGGSFLKKKLSDLVGLIGLIVAFLIAFGVTAAGSSGLTQKIFERVGIESFPGMDSVIFFV 215
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +LA I + ++ + LP K S L G +++ + L + I++ +T S
Sbjct: 216 GLAVGLLANLIVMWWLIMILPRTKVPKKSGLIGAAIGAVAFELLKQL-STLIMSSATGSP 274
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A ++ +V +Y++ + + A+ P
Sbjct: 275 AGAVFGPVIVLMVVMYLIWRVVLYISAWTATTAESLKYAHP 315
>gi|325687194|gb|EGD29216.1| putative ribonuclease BN [Streptococcus sanguinis SK72]
Length = 307
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 115/267 (43%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + D + ++ L+SVFP ++ N+ + + + +
Sbjct: 22 QFLRAFFRFYRAADSELTSVAVAYYWLISVFPLLLIVVNILPYFNIP--IADFLTAIKDM 79
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + + + +VL P+ GL + S L+A + S + L+ + N+AY V + R
Sbjct: 80 LPETLYDVVAKVMREVLTQPSTGLLSFSVLSALWTFSKSMNFLQFAFNKAYGVAKSRGLI 139
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R++S L + + F+ + ++L ++R ++ L + + +L
Sbjct: 140 SHRVMSLFVSLGLQILFALTLFLTMFGHMSLDFLRTYWKLDSQLYQHLQHFTEPLIYASL 199
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F L+ ++ FLP K K +LPG F ++ + +F+ Y+ + + +SI
Sbjct: 200 FAVLVMLYYFLPNVKISKKRYVLPGSAFVLLTILALLNIFSVYMDNYLNHLVDVRFFSSI 259
Query: 249 M--TCLVFLYMLGVFFILGAELNASMI 273
+ + + ++ I+GA LNAS+
Sbjct: 260 IMVVMMFWFIIIAKILIVGAVLNASIQ 286
>gi|242241280|ref|YP_002989461.1| ribonuclease [Dickeya dadantii Ech703]
gi|242133337|gb|ACS87639.1| ribonuclease [Dickeya dadantii Ech703]
Length = 332
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 100/280 (35%), Gaps = 11/280 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A F + G ++ I+ + LS+ P ++ GF+ + +++ +
Sbjct: 37 HLVRASIRFNDRMGSQFSAAITYFSFLSLIPILMVTFAAVGFVLASNPDMLTRLLERIVS 96
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + + L A Y N + LR ++ R V RS
Sbjct: 97 SISDPNLARMLKNTVHTAVRQRTSVGLTGLLIALYSGVNWIGNLREAIRALSRDVWERSP 156
Query: 129 Y------ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+ L F ++ + LV+ F+ A A + + L +
Sbjct: 157 HEEQKIYYRYLRDFMSLIGLLIALVLTLFLTSIAGSAQAAIVNALGLSGIKWLRPAMTLM 216
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K + ++L G + + + + T + +T S
Sbjct: 217 TLLISIFANYLLFLWILWVLPGHKPQRAALLRGTLMAAVGFEILKFAMTMVLPQLAT-SP 275
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A S++ + F Y + + A A+ +KK
Sbjct: 276 SGAAFGSVIGLMTFFYFFALLTLFCAAWIATAEKKSNKKK 315
>gi|257054599|ref|YP_003132431.1| ribonuclease, putative [Saccharomonospora viridis DSM 43017]
gi|256584471|gb|ACU95604.1| ribonuclease, putative [Saccharomonospora viridis DSM 43017]
Length = 366
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 108/276 (39%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + D + A E F E G A+ I+ ++LS+ P ++ G ++AGF+ G
Sbjct: 43 LRRKHPWL-DHVIRANEAFTERFGNHYAAAITYFSVLSLVPLLMVGFSVAGFVLAGNDVA 101
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + + + + PE + T + L G + L A Y + LR +L
Sbjct: 102 MRQLREGIVNSAPEGLGGLFTSIVQAALD-SRAGAGILGLLLALYSGLGWMGNLRDALTV 160
Query: 119 AYRVVEMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-- 175
+ + + + T++ G + V L + + ++ +
Sbjct: 161 QWGQEKPKLPFLSTKVKDLGALAGLGVALAVSFGLTAVGSGLGEFLLELMGLEDAAWARF 220
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ G I + A + ++V +LP K + + + G + + + V + Y+ +
Sbjct: 221 LLRLGTIVLALAANVLVFLWVLAWLPRKKVAVRNAVRGAVLAAVGFEVLKQVGGVYLSSV 280
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ S A S++ LVF ++ F + A+
Sbjct: 281 LS-SPSGALFGSVIGLLVFANLVARFLLFATAWAAT 315
>gi|262384858|ref|ZP_06077990.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262293574|gb|EEY81510.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 316
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/276 (15%), Positives = 98/276 (35%), Gaps = 6/276 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+F I+ D ++ F+++ +++ ++ + L S+ P + + G + +
Sbjct: 20 LFKILKDMVQGFIDDSVPRLSASLAYATLFSIIPLLSLLITI-GVFLKMDMAGQLYAQLE 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRV--VE 124
+ + I + +S + + ++ ++ SLN + + +
Sbjct: 79 PILGISVVNALNSVIENAANSNSSTFATIVSLAVSVFGATAIFAEIQSSLNTIWGIKAIP 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIY 183
+SW + V I+ F+ + +F ++ ++ I+
Sbjct: 139 KKSWLKYLKNRLLSFSIILVFAFILLVTFMISNVIENLSVRFMTNYPDVAESLVKVTGIF 198
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + LP AK KI I G I T I +VG + YI + T+Y
Sbjct: 199 LNIIVTTTIFALIFKILPDAKIKIKDIFTGAIVTTILLLVGQWGISLYI-NIANVGTVYG 257
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A + + ++Y + GAE + K
Sbjct: 258 TAAFLAVLITWIYYSAIIIYTGAEFTKAWANDMGGK 293
>gi|239991667|ref|ZP_04712331.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
Length = 384
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 99/274 (36%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 13 WHLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTTTTTVASIERN 72
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ V + +I A + S V ++ Y
Sbjct: 73 ILSASQTVLSERGVNDFAKPLLADVTTGARPDVISIGFAIALWSGSRAVNVFIDTITVMY 132
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + ++ + V P + + +I
Sbjct: 133 GLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP------DRVVEFVPWGTEVIAVL 186
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S + +PG + WV+G+ L Y+ T
Sbjct: 187 YWPLVILLTIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVEGPT 246
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 247 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 280
>gi|300725309|ref|YP_003714641.1| hypothetical protein XNC1_4557 [Xenorhabdus nematophila ATCC 19061]
gi|297631858|emb|CBJ92579.1| putative membrane protein [Xenorhabdus nematophila ATCC 19061]
Length = 325
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 93/279 (33%), Gaps = 11/279 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ A + F + G + I+ + LS+ P ++ +AGF+ + +++
Sbjct: 46 FIAHLIRAAQRFNDRMGSQFGAAITYFSFLSLIPILMLSFAVAGFVLASNPDLLARLVNG 105
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N V LR ++ R +
Sbjct: 106 IASSISDPALANTLKNSVDTAVNQRTTVGLTGLAIALYSGVNWVGNLREAILVQSREIWE 165
Query: 126 RSWYITRLISF--------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
R+ I F + LL ++ + + A + L +
Sbjct: 166 RNHEDKEKIYFQYIRDFFSLFGLLFALVMTLSLTSIAGSAQATIVHALGLEGIEWLRPVW 225
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + ++ A ++ +++ LP + + S+ G + I + V + T + ++
Sbjct: 226 TSIGMTISISANYLLFLWILWILPRHRPERKSLFKGTLIAAIGFEVIKYIMTMMLPRLAS 285
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
S A S++ + F Y + A A+
Sbjct: 286 -SPSGAAFGSVIGLMAFFYFFARLTLFCAAWIATAEEKK 323
>gi|54022904|ref|YP_117146.1| hypothetical protein nfa9370 [Nocardia farcinica IFM 10152]
gi|54014412|dbj|BAD55782.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 339
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/265 (16%), Positives = 95/265 (35%), Gaps = 8/265 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
D + A + + G A+ I+ +LS+FP ++ +AGF+ G +
Sbjct: 18 RPWLDHLIRAGGQYQRQRGDYFAAGITYFTVLSLFPLLMVAFAIAGFVLAGNQDLFTELQ 77
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN-RAYRV 122
+ + P + D + Q + + + + + + LR +L +
Sbjct: 78 NKIVENIPGEFGTQVNDLVDQAVE-SRGTVGVLGLITGLWTGLGWMANLRAALTEQWEGK 136
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKFFPALGNLLLIIWN 179
E +W++T+L G ++ V LV+ + L + L++
Sbjct: 137 HEDGNWFLTKLSDLGALVGLGVALVLSLGLSAVGSSDLGERVLDGLGLGGVPGARLLLTA 196
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I ++A + ++ LP + S + + + V + + Y+ T S
Sbjct: 197 VSILLALVASWAVFAWIIARLPREPVTLASAAKAALLAALIFEVFKFVASIYLRTVL-RS 255
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
A SI+ +VF Y+ +
Sbjct: 256 PAGATFGSIIGLMVFSYVTYRIILF 280
>gi|284991960|ref|YP_003410514.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284065205|gb|ADB76143.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 354
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 104/279 (37%), Gaps = 9/279 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA----GFLGAHQFVP 60
+ ++ + + +++ + +LSV P ++ F+G
Sbjct: 49 LRVPLQVLGRTVAKAWHDRILGLSAEAAFWQILSVPPLLIGLLGTLGYLGTFIGDASVAR 108
Query: 61 TVIDVVFG----AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
++V P+V+ + + +L L ++ L + + S+ ++
Sbjct: 109 IEAELVRASTEVLTPDVVEGLVQPTLDDILGSGRLDLVSVGFLLSLWAGSSATATFMNTV 168
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
AY ++R TRL + ++ + V+ + V L + G ++
Sbjct: 169 VIAYDQRDVRGPIRTRLKALWLFVVGLLLAVVTLPLLVLGRGVLVSLLP-ADWRGTATVL 227
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ ++ L + L + + + LPG + +VV A+ Y+
Sbjct: 228 VNAVYWPVVLVGLLLALTSFYHVVLPRRLPWHRHLPGTVLAVAFFVVTALATRTYVADIL 287
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
T + Y LA+ + L+F + G+ +LGAELNA++
Sbjct: 288 TTTLPYGALATPIAVLLFCFFFGMSVLLGAELNATIQAR 326
>gi|327330313|gb|EGE72062.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL097PA1]
Length = 436
Score = 103 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPHLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|332186510|ref|ZP_08388254.1| hypothetical protein SUS17_1621 [Sphingomonas sp. S17]
gi|332013493|gb|EGI55554.1| hypothetical protein SUS17_1621 [Sphingomonas sp. S17]
Length = 385
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 92/267 (34%), Gaps = 3/267 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + + +D AS I+ +A L++ P I G V + +
Sbjct: 110 LLVRTVRSALHDDFGIAASSIAFAAFLAMIPLIGLITGAYGLFAPPTSVAHNLRTLTAIL 169
Query: 71 PEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + LA L S A + + +L +N AYR+ R
Sbjct: 170 PADARQIVVGGLHNTLASHRADLVTLLASLGIALFSARRAGRSLLHGINLAYRIDRERRG 229
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
++ S VL + ++ + +YV P I+ G +
Sbjct: 230 LRRQIASTLLVLGCAALVLTALVSLSVLAFLKSYVPDGLPGARTASTILLFGSLTLGAGG 289
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ + ++PG I W+ LF Y+ + + Y L+++
Sbjct: 290 ALLLIYRYAPAA-EEPIPWRRVVPGTIAAVAMWLGATTLFRAYVAHVARFDDTYGSLSAV 348
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIY 275
+ +++L + +LGA LNA +
Sbjct: 349 IVLMLWLLVSAWALLLGARLNAEAMER 375
>gi|331696938|ref|YP_004333177.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326951627|gb|AEA25324.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 409
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 106/278 (38%), Gaps = 9/278 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVV 66
+ I +++ ++ ++ + LS+ P ++ G++G V +
Sbjct: 111 QLAVRTIVGAWDDNIFSESASAAFWQTLSLPPLLLGLLGSLGYIGEWFGPNTAQIVEARI 170
Query: 67 FGAWPEVI-----AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
A + + I + Q+L L ++ + + + S+ + + ++ RA+
Sbjct: 171 IAATSGIFTRDAVDQIIAPTVSQILTTGRSELVSLGFVISLWSGSSAMSSFVDAITRAHG 230
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+R+ R+++ ++A V +I + P L + + +I +
Sbjct: 231 QYGIRNPVWQRILALLLYVVALVGGIISLPLLALGPDRLPGILPE-SWRPAAITLIADLY 289
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + L ++ AK LPG + + ++ G YI +
Sbjct: 290 YPVIGVILVLALTTLYKVALPAKPPWWRGLPGALLAAVVFLAGVTGLRVYINWVTGTGYT 349
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+ + +G +LGA LNAS+ + +
Sbjct: 350 YGALAAPIAFLLAAFFIGFAIVLGAHLNASIQALWPAR 387
>gi|314973417|gb|EFT17513.1| putative ribonuclease [Propionibacterium acnes HL053PA1]
Length = 436
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---- 121
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWDPDFD 153
Query: 122 -VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|238797059|ref|ZP_04640562.1| Inner membrane protein yhjD [Yersinia mollaretii ATCC 43969]
gi|238719104|gb|EEQ10917.1| Inner membrane protein yhjD [Yersinia mollaretii ATCC 43969]
Length = 328
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPALAATLKNTVNTAIQQRTTVGLTGLAIALYSGVSWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+Y F ++ V L+I + A + + + L +
Sbjct: 161 QDQEAFYYRYARDFISLIGLVVALIITLSLTSIAGAAQSAIVNALGLGDIEWLRPAMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 AMSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFVMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIATAQYAEDKTLP 320
>gi|167840349|ref|ZP_02467033.1| YihY family protein [Burkholderia thailandensis MSMB43]
Length = 307
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCAAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + E R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLAIGASATFASLNTALSVIWPATETRASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ + I + + L
Sbjct: 142 LGLVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVAIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 261 VLLMWLYFSAAVLLL 275
>gi|331699049|ref|YP_004335288.1| ribonuclease [Pseudonocardia dioxanivorans CB1190]
gi|326953738|gb|AEA27435.1| ribonuclease [Pseudonocardia dioxanivorans CB1190]
Length = 355
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 108/276 (39%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + + D + A + + G A+ I+ ++L++ P ++ +AGF +
Sbjct: 27 LRSRYAWL-DHVVRAGARYTDRHGDHYAAAITYFSVLALVPLLMIAFAIAGFALRAQPEL 85
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + + A P + + D I + + A + + + A Y + LR +L+
Sbjct: 86 LEQLRVAITTAVPGGLGDTLNDIIQKSID-QAGAVGVLGLIGALYSGIGWMSNLREALSE 144
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + +LI LL +++S A+ + + LG+ ++
Sbjct: 145 QWAQPPETPNAVKKLIFDLLALLGLGLALVVSLAVTAVGTGVGRLLLDLVGLGDQGWALF 204
Query: 179 NGRIYATMLAL---FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ +L L ++ ++V LP A S L + + + + + T Y+
Sbjct: 205 LLGVVGVLLGLVANWLVFVWVIARLPRAPVATRSALKAAVLGAVGFEILKQVMTIYLRAV 264
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ S A SI+ L+F++ + F + A+
Sbjct: 265 TN-SPAGAAFGSIIGLLIFVFFVSRFILFVTAWAAT 299
>gi|322389286|ref|ZP_08062846.1| ribonuclease BN [Streptococcus parasanguinis ATCC 903]
gi|321144030|gb|EFX39448.1| ribonuclease BN [Streptococcus parasanguinis ATCC 903]
Length = 323
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 111/284 (39%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVF--DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ + I + + + + ++ L+S+FP ++ AN+ +
Sbjct: 1 MKKVLQKILGQPFIKGFVRFYQSAESDITSIAVAYYLLISIFPLMLIAANILPYFHIRPT 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + + I VL P+ GL + S ++A + S + L+ + N+
Sbjct: 61 --QILLSLQKVLPASLYRIVAQMISSVLTKPSTGLLSFSIISALWIFSQSIAYLQKAYNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+Y V + R RL SF + + + + + Y+ + F + + +
Sbjct: 119 SYGVEKERGIIWGRLFSFLISFALQGLFGLSLILSMFGKMIVRYLYQTFSFDRTIYVRLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N L LF+ L+ ++ LP K +LPG F +F Y+ + +
Sbjct: 179 NLTEPTIYLLLFVSLVLLYYTLPNVKIPKFRYVLPGATFVVAVLYAILNIFWKYVDRYVS 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ + + ++ I+G LNAS+ K
Sbjct: 239 HFLDARFFGSVVLAVIMFWFILVAKIMIIGCILNASIQFAREAK 282
>gi|33239566|ref|NP_874508.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33237091|gb|AAP99160.1| Ribonuclease BN family protein [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 313
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 34/299 (11%), Positives = 103/299 (34%), Gaps = 21/299 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
R +F ++ A + + D +++ + L S FP ++ ++A +
Sbjct: 6 RRHFNWFLRSLWYASQRWNRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGNQQGLD 65
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + P + + +++++ + A+ + N L+ +R
Sbjct: 66 QQIIGLASQVLPPSVVGLVETTLIKLVNQGFGA-GILGAMFLIITAGNAYLTLQRGADRL 124
Query: 120 YRV----VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL- 174
+ + + + +V++ V + I +Y+R A+ L
Sbjct: 125 WEDALPSKTSPIPLRMQAFRLIRNRIEAFLVVLLVGVLMVIDEISSYLRMIPGAVWTDLK 184
Query: 175 -------------LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+I G++ + I + + +P + I ++PG I
Sbjct: 185 DNSPQLTNTLSKIPLIEVGQVIIPFMGFTIMALLLQALVPRRRVPIRPLIPGSIMIGTLL 244
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ + I++ + Y ++ ++ ++++++G+ G + ++ +
Sbjct: 245 TLLNSAVSRTILSLGSRFQAYGIISGVLVLTLWIWLVGLIIYFGQCWSIGLVSNQVNRH 303
>gi|257386930|ref|YP_003176703.1| ribonuclease BN [Halomicrobium mukohataei DSM 12286]
gi|257169237|gb|ACV46996.1| ribonuclease BN [Halomicrobium mukohataei DSM 12286]
Length = 342
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 91/270 (33%), Gaps = 16/270 (5%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ V + E MA I+ A +S+ PF++ L G + ++
Sbjct: 3 RYRNVGRFLRAVYTEVRAERITFMAGSIAYHAFISLLPFLLVLLLLVTEFGDPETASRLV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + +T+ + + L + L + + +L + + Y
Sbjct: 63 AAIGTYFSPNESGLLTNVVEGARSE--TSLSILGVLTLLWGALKIFRSLDTAFSDIYETG 120
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ + T + ++ V L+I+ + +
Sbjct: 121 DENTLGDTFADAIVVLVALVVGLLIVGLASTQLS-------------FGDGPVGTLLSKV 167
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ AL + + V P + ++PG + W LF +Y+ F+ S +
Sbjct: 168 VAVAALTLVFLPVFYVFPDTDVTVREVVPGTVVAAGGWTALESLFRYYVA-FTGTSETFG 226
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ +I+ + +LY G+ ++ A NA +
Sbjct: 227 VVGTILLIVTWLYFNGLVLLVAAATNAVLA 256
>gi|307565954|ref|ZP_07628413.1| YihY family protein [Prevotella amnii CRIS 21A-A]
gi|307345382|gb|EFN90760.1| YihY family protein [Prevotella amnii CRIS 21A-A]
Length = 446
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/264 (15%), Positives = 97/264 (36%), Gaps = 3/264 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ +Y E W A+ ++ + L+++ P +A G ++
Sbjct: 32 LIYIAQRLYLVFNGLFVERHWGYAAQLTYNTLMALVPMFAAILAIARGFGFEDYIVEWCR 91
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F P + + + IS + Y + + N + V +
Sbjct: 92 QLFANQPNTAKVVLNLAKSYINYTHTGVILGISLVWMLYSVISLFNNIEAVFNGIWGVKK 151
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS ++ +TL+++S + + + ++ +F L +I
Sbjct: 152 ERSMGRAITDYVSILIFLPLTLILLSGLSIFFQSVIGHLPEFQLLTPILQELIS---FML 208
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L + I ++ LP K ++ I + S ++ ++ H V F++Y+ +Y
Sbjct: 209 PLSILTLLFISMYTLLPNTKVRVSMIFIPALMAAFSIIIIQSIYIHCQVFFASYNLIYGS 268
Query: 245 LASIMTCLVFLYMLGVFFILGAEL 268
LA++ +++L + I AEL
Sbjct: 269 LAALPLLMLWLQLSWYICIGFAEL 292
>gi|238793271|ref|ZP_04636898.1| Inner membrane protein yhjD [Yersinia intermedia ATCC 29909]
gi|238727439|gb|EEQ18966.1| Inner membrane protein yhjD [Yersinia intermedia ATCC 29909]
Length = 325
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRMGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPTLATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F + + L+I + A + + + L ++
Sbjct: 161 QDQEKFYYRYARDFISLTGLVIALIITLSLTSIAGAAQSAIVDALGLGGIDWLRPVMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 ALSISIAANYLLFLWIFWILPRHKPKKKALLRGTLVAAIGFEIIKFVMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 310
>gi|29828664|ref|NP_823298.1| ribonuclease BN-like family integral membrane protein [Streptomyces
avermitilis MA-4680]
gi|29605768|dbj|BAC69833.1| putative integral membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 345
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 101/263 (38%), Gaps = 14/263 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA---- 75
+E +A+ + LLSV P ++ L G++ T+ +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLSMIGLLGYVDDWTGADTIASLENNILEASRTVLSD 60
Query: 76 ----KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + V+ + ++ L A + S V ++ Y + R T
Sbjct: 61 KGVTEIAQPLLHDVMKGGRPDVISLGFLFALWSGSRAVNVFIDTITVMYGLDGTRGIVKT 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R++SF ++A + + + VA P A+ V + ++ ++ +
Sbjct: 121 RMMSFLLFIVALLIGSVALPLMVAGPDAVVNVVPW------STTVVQVLYWPVVIVLSIV 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ +S + +PG + WV+G+ L Y+ + T+Y LA+ +
Sbjct: 175 FLTTLYHVSVPVRSPWVEDVPGALVALAMWVLGSFLLRIYLTSTVEGPTIYGSLAAPVAV 234
Query: 252 LVFLYMLGVFFILGAELNASMII 274
L+++ + ++GA +NA++
Sbjct: 235 LLWIGVSAFAVLVGAAVNAAIDR 257
>gi|77410710|ref|ZP_00787069.1| ribonuclease BN, putative [Streptococcus agalactiae CJB111]
gi|77163246|gb|EAO74198.1| ribonuclease BN, putative [Streptococcus agalactiae CJB111]
Length = 306
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/287 (20%), Positives = 124/287 (43%), Gaps = 10/287 (3%)
Query: 1 MREYFCIV-----FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA 55
++++F + + I + HF + A ++ L++ FP +V AN+ +
Sbjct: 3 LKKFFEDLLAKLEYRPIQVFMRHFQSAEMDLSAIAVAYYLLVTAFPLLVIAANIFPYFHI 62
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ V ++ + P+ I +P + + + P+ G+ ++L A + S + +L+ +
Sbjct: 63 N--VSDLLSFMQKNLPKNIYEPASRLAVDAFSKPSTGILGFASLTAFWTMSKSLTSLQKA 120
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+N+AY V + R + I+RL+ G L+ L + L + + L
Sbjct: 121 INKAYGVDQHRDFVISRLVGVGTGLIILFLLTFVLIFSTFSKPVLQIIVNMYDLGDTLTA 180
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ N T L +F+G+ ++ LP A+ + + ++PG +F+ + L + Y++
Sbjct: 181 WLLNLAQPVTFLTIFLGIGILYFILPNARIRKVRYVIPGTLFSTFVIGFFSNLISQYVLN 240
Query: 235 FSTYSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ +++ L ILGA LNAS+ K
Sbjct: 241 RVEKMVDIKTFGSVVIFILMLWFIFLAHIMILGAILNASVQEIATGK 287
>gi|22537011|ref|NP_687862.1| ribonuclease BN [Streptococcus agalactiae 2603V/R]
gi|25010920|ref|NP_735315.1| ribonuclease BN [Streptococcus agalactiae NEM316]
gi|76787357|ref|YP_329592.1| ribonuclease BN [Streptococcus agalactiae A909]
gi|76798178|ref|ZP_00780430.1| ribonuclease BN, putative [Streptococcus agalactiae 18RS21]
gi|77405554|ref|ZP_00782645.1| ribonuclease BN, putative [Streptococcus agalactiae H36B]
gi|77409314|ref|ZP_00786018.1| ribonuclease BN, putative [Streptococcus agalactiae COH1]
gi|22533867|gb|AAM99734.1|AE014230_14 ribonuclease BN, putative [Streptococcus agalactiae 2603V/R]
gi|23095299|emb|CAD46509.1| Unknown [Streptococcus agalactiae NEM316]
gi|76562414|gb|ABA44998.1| ribonuclease BN, putative [Streptococcus agalactiae A909]
gi|76586486|gb|EAO62992.1| ribonuclease BN, putative [Streptococcus agalactiae 18RS21]
gi|77172078|gb|EAO75243.1| ribonuclease BN, putative [Streptococcus agalactiae COH1]
gi|77175861|gb|EAO78639.1| ribonuclease BN, putative [Streptococcus agalactiae H36B]
gi|319744898|gb|EFV97232.1| YihY family protein [Streptococcus agalactiae ATCC 13813]
Length = 306
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/287 (20%), Positives = 125/287 (43%), Gaps = 10/287 (3%)
Query: 1 MREYFCIV-----FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA 55
++++F + + I + HF + A ++ L++ FP +V AN+ +
Sbjct: 3 LKKFFEDLLAKLEYRPIQVFMRHFQSAEMDLSAIAVAYYLLVTAFPLLVIAANIFPYFHI 62
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ V ++ ++ P+ I +P + + + P+ G+ ++L A + S + +L+ +
Sbjct: 63 N--VSDLLSLMQKNLPKNIYEPASRLAVDAFSKPSTGILGFASLTAFWTMSKSLTSLQKA 120
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+N+AY V + R + I+RL+ G L+ L + L + + L
Sbjct: 121 INKAYGVDQHRDFVISRLVGVGTGLIILFLLTFVLIFSTFSKPVLQIIVNMYDLGDTLTA 180
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ N T L +F+G+ ++ LP A+ + + ++PG +F+ + L + Y++
Sbjct: 181 WLLNLAQPVTFLTIFLGIGILYFILPNARIRKVRYVIPGTLFSTFVIGFFSNLISQYVLN 240
Query: 235 FSTYSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ +++ L ILGA LNAS+ K
Sbjct: 241 RVEKMVDIKTFGSVVIFILMLWFIFLAHIMILGAILNASVQEIATGK 287
>gi|314923359|gb|EFS87190.1| putative ribonuclease [Propionibacterium acnes HL001PA1]
Length = 436
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 97/278 (34%), Gaps = 13/278 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTV 62
+ A F G A+ I+ +L++ P I F + G + + + V
Sbjct: 29 RHSIAHLLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQV 88
Query: 63 IDVVFGAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+D V G E + I I + + +F +S L A + V +R + +
Sbjct: 89 VDSVVGLATESSDKQQIRAIIENAMKVGGSVWVFVVSILTALWAGIGWVGNIRKGIQAEW 148
Query: 121 -----RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNL 173
V + R + +L L + ++ + ++ +
Sbjct: 149 APDFDMVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGY 208
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ + AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 209 GLLLTLAGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVGAG-YLV 267
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 268 RAFNSNKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|329295670|ref|ZP_08253006.1| ribonuclease [Plautia stali symbiont]
Length = 333
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 94/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A+E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 48 HFLRALERFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNQDLLSELINKIVN 107
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + L + L A Y N + LR ++ R V R
Sbjct: 108 SISDPTLATTLKNTLNTAIQQRATVGLTGLLLALYSGINWMGNLREAVRAQSRDVWERTP 167
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
W+ L +L + LVI + A A + + L +
Sbjct: 168 DDQEKWWKKYLRDLVSLLGLMLALVITLSLTSIAGAAQAAIVNALGLGDIEWLRPAMTII 227
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K + ++L G + I + V + T + +T S
Sbjct: 228 ALSLSIFANYLLFLWIFWILPRHKPRKKALLRGTLLAAIGFEVIKFVMTLTLPKLAT-SP 286
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 287 SGAAFGSVLGLMAFFYFFARLTLFCAAWIAT 317
>gi|300784486|ref|YP_003764777.1| ribonuclease BN [Amycolatopsis mediterranei U32]
gi|299794000|gb|ADJ44375.1| ribonuclease BN [Amycolatopsis mediterranei U32]
Length = 384
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 99/279 (35%), Gaps = 9/279 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ E + ++ A+ + LS+ P ++ GF+G V V
Sbjct: 18 WRLVTRTFAKAWEGNIFSEAAEAAFWQTLSLPPLLLGLLGSLGFVGEWFGQDVVAAVHDR 77
Query: 69 AWP--------EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ I + +L V + ++ L + + S+ + + ++ A+
Sbjct: 78 IIGFCRTVFSANAVHDIIEPTVNSILTVGKGEIVSVGFLISLWAGSSAMSSFVDAITVAH 137
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+R+ R+ + L V LV+ + P L + +
Sbjct: 138 DQYGVRNDVWQRIFALLLYLCGLVILVVGLPLLAIGPDLLPEFFPTA-WRPTVTSWVSAL 196
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A + + L ++ K LPG + + +++ +V Y+ +
Sbjct: 197 YFPALGAMITLALTTLYKLALPRKLPWHRGLPGAVLAMVVFLLSSVGLRVYLNWITKTGY 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+ ++ +G+ + GA N+++ + K
Sbjct: 257 TYGALAAPIAFLLLMFFIGLAVVGGAYFNSAIQELWPAK 295
>gi|88606794|ref|YP_505080.1| YihY family protein [Anaplasma phagocytophilum HZ]
gi|88597857|gb|ABD43327.1| YihY family protein [Anaplasma phagocytophilum HZ]
Length = 277
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 70/274 (25%), Positives = 126/274 (45%), Gaps = 15/274 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-----AHQFVPTV 62
F I A+ F + DG A ++S LLS+FPF VF L + +
Sbjct: 9 FFKCICKAVIDFRDHDGMEYAGYLSFIVLLSMFPFFVFFNALTSSIVSVLDKDQFLYTRL 68
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
DV+ G P + I ++L+ P + L T++ + +S+ +E +R LN+A RV
Sbjct: 69 FDVLSGELPHDTMDALLPRIEEILSGPPQSLLTVAIGGVIWTASSVIEGIRHVLNKALRV 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R+ S L+ +++ V +P+ V + + L R
Sbjct: 129 SAPPPYILGRMFSILQFLIIVAVMMLSVLFAVLVPIIFEVVGRHWEFL----------RF 178
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + LFI + +++ +P + I+ +LPG +W + ++ F+ Y+ TF T+Y
Sbjct: 179 VVSKVVLFIAVSWIYFMVPNVRQNILVVLPGAAVVTATWTLTSMAFSWYLSTFQVLKTIY 238
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L I+ ++F Y+L +FFI GAELN + +
Sbjct: 239 GNLTGIIAAMLFFYILSIFFIYGAELNYRLSNRH 272
>gi|108798184|ref|YP_638381.1| hypothetical protein Mmcs_1213 [Mycobacterium sp. MCS]
gi|119867280|ref|YP_937232.1| putative ribonuclease [Mycobacterium sp. KMS]
gi|108768603|gb|ABG07325.1| conserved hypothetical protein [Mycobacterium sp. MCS]
gi|119693369|gb|ABL90442.1| putative ribonuclease [Mycobacterium sp. KMS]
Length = 339
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 105/277 (37%), Gaps = 9/277 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + FD + A E + E G A+ I+ + ++FP ++ G ++AGF+
Sbjct: 13 LRARYGW-FDHVMRAQERYKESKGDFYAAGITYFTVFALFPLLMLGFSIAGFVLASQPDV 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + D + + + + D ++ L AA+ + LR +L
Sbjct: 72 IAAIADRIRQTVSGDVGRQLVD-LMNTAIGSRTSLGIFGLATAAWAGLGWMNNLREALTA 130
Query: 119 AYRVV-EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
++ E +++ T+L +L A + +V+ + + + + ++ +
Sbjct: 131 MWQQRSETGNFFGTKLSDLIALLSAFLAIVVTVALTALGDQGVITRLLAWVGIEDIPGLR 190
Query: 178 WNGR---IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
W R + + ++ ++ LP S + + +++ + + + Y+ T
Sbjct: 191 WGLRAASLLVAVGISWLLFTWMISRLPRESVSFRSSVRAGLLAAVAFEIFKQVASIYLRT 250
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
T A ++ +VF Y+ + A+
Sbjct: 251 VLT-GPAGATFGPVLGLMVFAYITARLILFATAWAAT 286
>gi|293607559|ref|ZP_06689893.1| serum resistance protein [Achromobacter piechaudii ATCC 43553]
gi|292813992|gb|EFF73139.1| serum resistance protein [Achromobacter piechaudii ATCC 43553]
Length = 317
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 94/273 (34%), Gaps = 7/273 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGA 69
++ D+ + + + ++L + S+ P ++ +AG G + + +
Sbjct: 29 LLMDSANQWSSHRASSKGAALALYMVFSLAPMLILVIAVAGAFYGEDAVRSELFEQMRSL 88
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV-EMRS 127
E A+ I + + IS + ++ L+ SL+ + V +
Sbjct: 89 TGERGAEVIQTVLASAHESGGGWIAALISIFVLIFSATTAFAELKASLDDLWEVSANQKG 148
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ S + L + V + + AL +K + L +T+
Sbjct: 149 GIQGMVRSRMLSFGLVLVLALFLLVSLTVNAALGAAQKLYGDLWMASTFATVADWLSTLF 208
Query: 188 ---ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + LP+AK ++PG I T ++VG Y+ + S Y
Sbjct: 209 SFSVVVALFAVIFKLLPSAKISWPDVIPGAIVTAALFLVGKWGIGLYLSRGAAVSA-YGA 267
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S++ L+++Y F GA + +
Sbjct: 268 AGSLIALLLWIYYSAQIFFFGAVFTRQFALRFG 300
>gi|328884565|emb|CCA57804.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
Length = 336
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 89/264 (33%), Gaps = 8/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ I+ + L++FP I A + L + + + + + +
Sbjct: 35 HAWRSYETLDAAHWTRLAAAITFLSFLALFPLITVAAAIGAALLSEEQLDKIEEKIGDQV 94
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + ++ A + ++ + + A+R L + + ++ I
Sbjct: 95 PGISDQLDIGGLV----ANAGTVGLVAGAVLLVTGISWIGAMRDCLRAVWGLDDIEGNPI 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF---FPALGNLLLIIWNGRIYATML 187
VL+ + + S + P G + + ++
Sbjct: 151 LLKGKDALVLVGLGGVALASLAASWLGSTTVGWTADRLGIPGDGAGGFFLQVAAVLVAVV 210
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L++V LP ++ + + + + +L Y+ + S MY
Sbjct: 211 ADFLILLYVLTLLPGVHPPRRRLVVAALMGAVGFELLKLLLGGYMRGVAAKS-MYGAFGV 269
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 270 PVALLLWINFTAKLLLYCAAWTAT 293
>gi|306835095|ref|ZP_07468136.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
gi|304569010|gb|EFM44534.1| conserved hypothetical protein [Corynebacterium accolens ATCC
49726]
Length = 389
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 103/284 (36%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVIDVVF 67
++ F + A+ ++ L++ P ++ ++A + + + +
Sbjct: 60 VMRRVWADFFHDALMDRAAAMTYFTLMAFAPTVLAAYSIATLVFSSRRGEVEALTTQFIE 119
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +A+ + + ++ +G +S L + + +S V A + N Y VE
Sbjct: 120 TYVPRSMAEEAGNIVSSIIGSTREGTFALVVSVLISLFAASAYVRAFSRTANTVYGRVEG 179
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALGNLL 174
R T + + ++ + V++ + + V + G +
Sbjct: 180 RGTIRTWALMWAITVVLVIGAVVVLCANLLRDTVVDSVIEPVALRLGLHGTVDFFGGIFM 239
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ R T++ + + F P + + I G + ++ +V F+ YI
Sbjct: 240 PVWNWLRFPITVVVALALIAVWYHFAPNVRPSRFRWITLGSVVALVTNLVVWGAFSLYIK 299
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ S +Y ++M + +++ ILG +++A ++
Sbjct: 300 YLAGVS-IYGAFGTVMAVFMTVWLSNTMLILGIKIDAEVLRAKE 342
>gi|254517319|ref|ZP_05129376.1| exoribonuclease II [gamma proteobacterium NOR5-3]
gi|219674157|gb|EED30526.1| exoribonuclease II [gamma proteobacterium NOR5-3]
Length = 293
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 93/268 (34%), Gaps = 12/268 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFG 68
DI+ A++ ++E +A A ++ L S+ P ++ ++ G G + +
Sbjct: 2 DILKQAVKVWLESHAFANAGSLAFFTLFSIAPVMIVLVSVIGVFYGQEAAQGQIAAQLQE 61
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
A+ + + + + A ++ ++ SLN + V S
Sbjct: 62 VVGPDAAETVQNAVAASSLKEGGLVATLAGIAAMLLGATTVFGQMQNSLNAIWTVAPKPS 121
Query: 128 WY------ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
RL S VL +++ + V + L V+ + P
Sbjct: 122 RNSILLLIQKRLTSLSIVLAIGFVMLVSLSLSVGLRYVLHNVQGWLPWYDVAFGFADMLT 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++L + LP K + G + T + + G L + Y+ +T ++
Sbjct: 182 ---SILITSFLFATIFKVLPDVKLSWRDVALGSLLTAVLFTFGRSLISLYLSYTAT-AST 237
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELN 269
Y S++ L+++ + + GA
Sbjct: 238 YGAAGSLVLLLLWVNYSSLILLFGAAFT 265
>gi|72383299|ref|YP_292654.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. NATL2A]
gi|124024878|ref|YP_001013994.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. NATL1A]
gi|72003149|gb|AAZ58951.1| putative serum resistance locus BrkB [Prochlorococcus marinus str.
NATL2A]
gi|123959946|gb|ABM74729.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. NATL1A]
Length = 304
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 102/297 (34%), Gaps = 21/297 (7%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVP 60
+ +F ++ A E + + D +++ + L S FP ++ ++A +
Sbjct: 7 KKARWLFSSLWRAYERWSKCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGKQQGIEQ 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I++ P + + + Q++ + A+ + N L+ +R +
Sbjct: 67 RIIELTAEVLPSEVIALVASTLEQLINQGFGA-GILGAMFLMITAGNAYLTLQRGADRLW 125
Query: 121 R----VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV------------- 163
V + F + + +V++ + + I A +
Sbjct: 126 EDVLPVKSKPDPLRLQAFRFIRNRIEAFFVVLLVGILMVIDQISANIRLIPEAVLEDLAN 185
Query: 164 -RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ + ++ G+ ++ + + LP+ + + ++PG +
Sbjct: 186 TTPWVENAITKIPVLQVGQFILPLIGFSTMALLLQGLLPSRRVPLKPLIPGALMIGTLLT 245
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + I++ + Y + ++ ++++M+GV G + + +
Sbjct: 246 ILNLAVSRSILSLGSRFQAYGFIGGVLVLTLWVWMVGVIIYFGQCWSVVIASMRRNR 302
>gi|182435180|ref|YP_001822899.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178463696|dbj|BAG18216.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 371
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 99/274 (36%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 3 WHLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTATTTVASIERN 62
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ V + +I A + S V ++ Y
Sbjct: 63 ILSAAQTVLSERGVNDFAKPLLADVTTGARPDIISIGFAIALWSGSRAVNVFIDTITVMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + ++ + V P + + +I
Sbjct: 123 GLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP------DRVVELVPWGTEVIAVL 176
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
ML L ++ +S + +PG + WV+G+ L Y+ T
Sbjct: 177 YWPLVMLLSVAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 270
>gi|226323653|ref|ZP_03799171.1| hypothetical protein COPCOM_01428 [Coprococcus comes ATCC 27758]
gi|225207837|gb|EEG90191.1| hypothetical protein COPCOM_01428 [Coprococcus comes ATCC 27758]
Length = 277
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 56/258 (21%), Positives = 114/258 (44%), Gaps = 2/258 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + ++ A A+ + +LS+ P I+ + + + V+ V +P
Sbjct: 8 IREITGQVSQKHVGAYAAQSAYFFVLSMIPIILLLLAIIQYTPVTKA--DVMTAVVNLFP 65
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + I+ + +K + I+A+ A + + GV A+ LN AY + E R++
Sbjct: 66 ETSMQDFMVGIVNEVYNQSKTVIPITAIVALWSAGKGVLAVSTGLNCAYELRETRNYVFL 125
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R+ + Y +L +V+ + V ++ P L +I R + +A+
Sbjct: 126 RIRASIYTILFIAAIVMALVLSVFGNNISIFIYHKIPFLAETTDMIMRLRTVISFVAMTG 185
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ V+ FLP K ++ G IF + W+V + +F+ Y+ F +S +Y + +I+
Sbjct: 186 ISLLVYHFLPNRKLPFRDLILGSIFCSLGWLVISFVFSMYLTIFKGFSGLYGSMTAIILV 245
Query: 252 LVFLYMLGVFFILGAELN 269
+++LY +LG +N
Sbjct: 246 MLWLYFCMYVMLLGGLIN 263
>gi|152990089|ref|YP_001355811.1| ribonuclease BN [Nitratiruptor sp. SB155-2]
gi|151421950|dbj|BAF69454.1| ribonuclease BN [Nitratiruptor sp. SB155-2]
Length = 281
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 100/268 (37%), Gaps = 12/268 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAW 70
+ + I+ F + D A+ +S + S+ P ++ + L + + + +F +
Sbjct: 4 LKELIKTFYDPDISLYAASLSFYTIFSIVPLLLVFFTIFTKLPSFSDYYGKLKHFIFTSL 63
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ ++ + L +K L I + + S + +N+ ++ RS++
Sbjct: 64 IPTQQETLSAYLDTFLQNSSK-LGIIGFVFVLFASIMFFQNYEYIVNKIFK-SRPRSFWD 121
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + LA + L + ++ I L + + L ++
Sbjct: 122 SITTYWTLMTLAPIGLALSFYLSTKIQHTLNSYQYTN---------WIDFLSIFPYLIIW 172
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ + L + W +G LF +Y++ TY+T+Y ++I+
Sbjct: 173 AIFFITYKISSTTWIHPKAALYSSFIASLVWDIGKNLFVYYVIYSKTYATLYGSFSAILF 232
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWR 278
+++Y+ F+ G +L + Y R
Sbjct: 233 FFLWIYISWQIFLYGLKLCYLINQKYSR 260
>gi|239983096|ref|ZP_04705620.1| ribonuclease BN-like family integral membrane protein [Streptomyces
albus J1074]
gi|291454928|ref|ZP_06594318.1| integral membrane protein [Streptomyces albus J1074]
gi|291357877|gb|EFE84779.1| integral membrane protein [Streptomyces albus J1074]
Length = 378
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/199 (19%), Positives = 80/199 (40%), Gaps = 6/199 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + V + L +I L A + S V ++ Y + +R TRL++
Sbjct: 65 EIAQPILHDVTKGGSPDLISIGFLLALWSGSRAVNVFIDTITVMYGLDGVRGIVKTRLLA 124
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
FG ++A + ++ + V P L V + +I ++ I L
Sbjct: 125 FGLFVVALLMGSVVLPLMVIGPDTLVSVVPWGE------NLIQLLYWPVILVLSVIFLTT 178
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +S + PG + WV+G+ L Y+ T+Y LA+ + L+++
Sbjct: 179 LYHVSVPVRSPWIEDTPGALVALGMWVLGSFLLRIYLTNTVEGPTIYGSLAAPVAVLLWI 238
Query: 256 YMLGVFFILGAELNASMII 274
+ ++GA +NA++
Sbjct: 239 GVSAFAVLVGAAVNAAIDR 257
>gi|182436491|ref|YP_001824210.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178465007|dbj|BAG19527.1| putative integral membrane protein [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 340
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 96/265 (36%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + E +A+ I+ + L++FP I GA +A L + + V T+ D +
Sbjct: 32 HVWRSYERLERVHWARLAAAITFISFLALFPLIAVGAAVAAALLSDEQVDTIKDKLADQV 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SW 128
P + + D ++ A + ++ + V +LR L + + E++ +
Sbjct: 92 PGISDQLGVDGLI----ANAGTVGLVAGALLLFTGVGWVGSLRECLRAVWELDEVQEANP 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ ++ + V A+ + N + +
Sbjct: 148 VVAKVKDAVLLVGLGGAGLATLAVSTVGSTAVGWTADQIGIPENGAGGVLLRVAALAVAV 207
Query: 189 L--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F+ L+++ LP + ++ + + + + +L Y+ + S MY
Sbjct: 208 VADFLLLLYLLTLLPGVEPPRRRLMVAALLGAVGFELLKLLLGSYMREVAGKS-MYGAFG 266
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 267 VPIALLLWINFTAKLLLFCAAWTAT 291
>gi|307128882|ref|YP_003880898.1| hypothetical protein Dda3937_02003 [Dickeya dadantii 3937]
gi|313104054|sp|P45417|Y2003_DICD3 RecName: Full=Uncharacterized protein Dda3937_02003; AltName:
Full=K1 ORF
gi|306526411|gb|ADM96341.1| conserved inner membrane protein [Dickeya dadantii 3937]
Length = 328
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 95/271 (35%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A + F + G + I+ + LS+ P ++ AGF+ + +I+ +
Sbjct: 43 HFIRAGDRFNDRMGNQFGAAITYFSFLSLIPILMVSFATAGFVLASNPDLLTGLINRIVN 102
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + L A Y N + LR +++ R V R
Sbjct: 103 SISDPSLARTLKNTVNTAVRQRTTVGLTGLLIALYSGVNWIGNLREAIHAQSRDVWERQP 162
Query: 129 Y------ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+ + L F ++ + LVI F+ A A + + + L ++
Sbjct: 163 HEEEKIYLRYLWDFLSLIGLLLALVITLFLTSVAGSAQATIVRALGLNGIDWLRPVMTLI 222
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP + +L G + I + T + +T S
Sbjct: 223 ALSISIFANYLLFLWILWVLPRHNPRRGPLLRGTLMAAIGFEALKFAMTVALPELAT-SP 281
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 282 SGAAFGSVIGLMTFFYFFARLTLFCAAWIAT 312
>gi|326775817|ref|ZP_08235082.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|326656150|gb|EGE40996.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 378
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 99/274 (36%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 13 WHLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTATTTVASIERN 72
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ V + +I A + S V ++ Y
Sbjct: 73 ILSAAQTVLSERGVNDFAKPLLADVTTGARPDIISIGFAIALWSGSRAVNVFIDTITVMY 132
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + ++ + V P + + +I
Sbjct: 133 GLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP------DRVVELVPWGTEVIAVL 186
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
ML L ++ +S + +PG + WV+G+ L Y+ T
Sbjct: 187 YWPLVMLLSVAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVEGPT 246
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 247 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 280
>gi|325955112|ref|YP_004238772.1| ribonuclease BN [Weeksella virosa DSM 16922]
gi|323437730|gb|ADX68194.1| ribonuclease BN [Weeksella virosa DSM 16922]
Length = 301
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 100/281 (35%), Gaps = 9/281 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
++ II I F ++ M++ ++ A+ S+ P ++ ++A L + + +
Sbjct: 4 IKDLYKIIIQTIVEFTDDRLMKMSASLTYYAMFSLSPVLLIVLSMASLLYKKEAIENRLY 63
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +A I D + + I + ++ ++ S N +R+
Sbjct: 64 YEIKELVGSELAIQIQDFVANSAVSGDSNIALIIGVGVLIFGATTVFTDMQDSFNLIWRI 123
Query: 123 VEMRSWYITRL-----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLI 176
+ + + +SF ++++ L V + + + +
Sbjct: 124 EAVPKRAMLKFLANRGVSFLFIMILGFILFSSVIVSSLVVRFGEDILHWLDISQTISAST 183
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + I + FLP K K IL G + T + V ++Y+ S
Sbjct: 184 FMMINNILSYVLAVIVFFLLFKFLPDIKVKPKPILIGSLVTAGLFFVAKYFISYYLS-IS 242
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y+T++ SI+ L+++Y GA+ YY
Sbjct: 243 KYNTIFGSAGSIVILLLYIYYNAAIMYFGAKFTKVFTEYYG 283
>gi|312867757|ref|ZP_07727963.1| YihY family protein [Streptococcus parasanguinis F0405]
gi|311096820|gb|EFQ55058.1| YihY family protein [Streptococcus parasanguinis F0405]
Length = 323
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 111/284 (39%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVF--DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ V I + + + + ++ L+S+FP ++ AN+ +
Sbjct: 1 MKKVLQKVLGQPFIKGFVRFYQSAESDITSIAVAYYLLISIFPLMLIAANILPYFHIRPT 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + + I VL P+ GL + S ++A + S + L+ + N+
Sbjct: 61 --QILLSLQKVLPASLYRIVAQMISSVLTKPSTGLLSFSIISALWIFSQSIAYLQKAYNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+Y V + R RL SF + + + + + Y+ K F + + +
Sbjct: 119 SYGVEKERGIIWGRLFSFLISFALQGLFGLSLILSMFGKMIVRYLYKTFSFDRTIYVRLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N L LF+ L+ ++ LP K +LPG F +F Y+ + +
Sbjct: 179 NLTEPTIYLLLFVSLVLLYYTLPNVKIPKFRYVLPGATFVVAVLYAILNIFWKYVDRYVS 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ + + ++ I+G LNAS+ K
Sbjct: 239 HFLDARFFGSVVLAVIMFWFILVAKIMIIGCILNASIQFAREAK 282
>gi|314981035|gb|EFT25129.1| putative ribonuclease [Propionibacterium acnes HL110PA3]
gi|315091864|gb|EFT63840.1| putative ribonuclease [Propionibacterium acnes HL110PA4]
gi|315093377|gb|EFT65353.1| putative ribonuclease [Propionibacterium acnes HL060PA1]
gi|327327532|gb|EGE69308.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL103PA1]
Length = 436
Score = 102 bits (255), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 96/278 (34%), Gaps = 13/278 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTV 62
+ A F G A+ I+ +L++ P I F + G + + + V
Sbjct: 29 RHSIAHLLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQV 88
Query: 63 IDVVFGAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+D V G E + I I + + F +S L A + V +R + +
Sbjct: 89 VDSVVGLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEW 148
Query: 121 -----RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNL 173
V + R + +L L + ++ + ++ +
Sbjct: 149 APDFDMVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGY 208
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ + AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 209 GLLLTLAGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVGAG-YLV 267
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 268 RAFNSNKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|315080583|gb|EFT52559.1| putative ribonuclease [Propionibacterium acnes HL078PA1]
Length = 436
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 91/273 (33%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A F G A+ I+ +L++ P + F + G + + + V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQAVDSVV 93
Query: 71 PEVIAKPITDEILQVLAV-----PAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
+I ++ + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|315108622|gb|EFT80598.1| putative ribonuclease [Propionibacterium acnes HL030PA2]
Length = 436
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 92/273 (33%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A F G A+ I+ +L++ P + F + G + + + VV
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYVLNQVVDSVV 93
Query: 71 PEVIAKPITDEILQVLAV-----PAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
+I ++ + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|315223035|ref|ZP_07864914.1| YihY family protein [Streptococcus anginosus F0211]
gi|315187985|gb|EFU21721.1| YihY family protein [Streptococcus anginosus F0211]
Length = 316
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 57/284 (20%), Positives = 120/284 (42%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M+++ + + + + + + ++ L+S+FP ++ N+ +
Sbjct: 15 MKKFVSKIGQNPFLQSFFKFYQASEIDLTSIAVAYYLLISIFPLLLIVVNILPYFQIP-- 72
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ ++ + PE + + + +L P+ GL + S L+A + S + L+ + N+
Sbjct: 73 IAEFLEAMEDVLPESLYEVVAKVTRNLLTQPSSGLLSFSILSALWAFSQSMSFLQKAFNK 132
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R RL S L + + + ++L + F+ G L +
Sbjct: 133 AYGVAKDRGLISHRLFSLVISLGLQFLFALSLLLTMFGRMSLRLLHSFWEFDGQLYASLQ 192
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF+ L+ ++ FLP K + I +LPG IF + V LF+ Y+ T+
Sbjct: 193 RMTQPTIYTLLFLSLLMLYYFLPNVKIRKIRYVLPGTIFVVFTIGVLLNLFSVYLDTYVN 252
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +SI + +++ + I+GA LNAS + ++
Sbjct: 253 HLMDVRFFSSIFVVVVMIWFTFIAQIMIIGAILNASYQGCHEKE 296
>gi|312199944|ref|YP_004020005.1| ribonuclease BN [Frankia sp. EuI1c]
gi|311231280|gb|ADP84135.1| ribonuclease BN [Frankia sp. EuI1c]
Length = 444
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 90/272 (33%), Gaps = 7/272 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVP 60
D A + G +A+ + LS FP + AGF+
Sbjct: 23 RRSLPPLDHTIRAYARYGANGGDRLAASTTYYVFLSFFPLVALLFAAAGFVVDSYPDLKD 82
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + G P + K + + LA F S +A+R+ ++
Sbjct: 83 DMVRQINGYLPGLADKLNISSLGTLKVGIGVLGLVGLLLAGLAFVSALRDAIRLMWHQNT 142
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ RL + + +VI + A + + G+ L
Sbjct: 143 DAG---NLITRRLRDIRVLAGLGLLVVISLALTSLATSANGVLLRATGMAGSSLASWSAR 199
Query: 181 RIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + ++F++LF + ++ + + V ++ T + +T +
Sbjct: 200 GLGVLLALIADLMVFLYLFWRLPRQTSRRAVARAALLGAVGIEVFKLVGTWLVGK-TTDN 258
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
MY A ++ L+++ ++ + + A +
Sbjct: 259 PMYGTFAVLVGLLIWINIVMRWTLFAAAWAVT 290
>gi|161869450|ref|YP_001598617.1| ribonuclease BN/unknown domain fusion protein [Neisseria
meningitidis 053442]
gi|161595003|gb|ABX72663.1| ribonuclease BN [Neisseria meningitidis 053442]
Length = 371
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/249 (17%), Positives = 88/249 (35%), Gaps = 9/249 (3%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEVIAKPITDEILQVLAVP 89
++ + LL++ P + +A + + + V A + D I
Sbjct: 1 MTFTTLLALVPVLTVMVAVASIFPVFDRWSDSFVSFVNQTIVPQGADMVFDYI-NAFREQ 59
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
A L I ++ S + + + NR +RV R W + L+ + + ++L +
Sbjct: 60 ANRLTAIGSVMLVVTSLMLIRTIDNTFNRIWRVNSQRPWMMQFLVYWALLTFGPLSLGVG 119
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS 209
V + R AT+ + + L ++ F+P
Sbjct: 120 ISFMVG-------SVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFVPARQ 172
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
G + T LFT Y+ F Y ++Y A++ L++L +L + GA L
Sbjct: 173 AFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGGAVLT 232
Query: 270 ASMIIYYWR 278
+S+ +
Sbjct: 233 SSLSYWQGE 241
>gi|123444232|ref|YP_001008200.1| hypothetical protein YE4060 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122091193|emb|CAL14076.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318607895|emb|CBY29393.1| inner membrane protein YhjD [Yersinia enterocolitica subsp.
palearctica Y11]
gi|330862179|emb|CBX72342.1| inner membrane protein yhjD [Yersinia enterocolitica W22703]
Length = 329
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F + + L+I + A + + + L ++
Sbjct: 161 QDQEKFYYRYARDFVSLTGLVIALIITLSLTSIAGAAQSAIVDALGLGGIEWLRPVMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 ALSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 310
>gi|121596477|ref|YP_991269.1| putative ribonuclease BN [Burkholderia mallei SAVP1]
gi|166999452|ref|ZP_02265291.1| putative ribonuclease BN [Burkholderia mallei PRL-20]
gi|121224275|gb|ABM47806.1| putative ribonuclease BN [Burkholderia mallei SAVP1]
gi|243064515|gb|EES46701.1| putative ribonuclease BN [Burkholderia mallei PRL-20]
Length = 307
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIDNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 261 VLLMWLYFSAAVLLL 275
>gi|29829957|ref|NP_824591.1| ribonuclease BN family membrane protein [Streptomyces avermitilis
MA-4680]
gi|29607067|dbj|BAC71126.1| putative membrane protein, ribonuclease BN-like family
[Streptomyces avermitilis MA-4680]
Length = 344
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 94/264 (35%), Gaps = 8/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ ++ + +++FP + A + + + T+ D +
Sbjct: 60 HAWRSYERLDRVKWTQLAAAMTFISFVALFPLLTVAAAIGAAALSEEQQKTLQDKLAEQV 119
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVEMRSWY 129
P + + ++Q A + I+ + V A+R L + + + +
Sbjct: 120 PGISDQLDIHALVQ----NAGTVGVIAGAVLLFTGIGWVGAMRDCLRAVWELDDDEENPF 175
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATML 187
+ +L G +L +++ + + + ++ +L
Sbjct: 176 LRKLKDGGVLLGLGGAVLVTLATSTVASAMVGWTADRLGIERDGWGSVLLHITAFLVAVL 235
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L++V LP + ++ + + + + +L + YI ++ S MY
Sbjct: 236 ADFLLLLYVLTLLPGVEPTRRRLVVAALIGAVGFELLKLLLSGYIQGVASKS-MYGAFGV 294
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 295 PVALLLWINFTSKLLLFCAAWTAT 318
>gi|29654869|ref|NP_820561.1| YihY family protein [Coxiella burnetii RSA 493]
gi|153208752|ref|ZP_01946990.1| YihY family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154707441|ref|YP_001423830.1| ribonuclease BN [Coxiella burnetii Dugway 5J108-111]
gi|161830403|ref|YP_001597413.1| YihY family protein [Coxiella burnetii RSA 331]
gi|165918777|ref|ZP_02218863.1| YihY family protein [Coxiella burnetii RSA 334]
gi|212212070|ref|YP_002303006.1| ribonuclease BN [Coxiella burnetii CbuG_Q212]
gi|212219292|ref|YP_002306079.1| ribonuclease BN [Coxiella burnetii CbuK_Q154]
gi|32699631|sp|Q83BD3|Y1578_COXBU RecName: Full=UPF0761 membrane protein CBU_1578
gi|189039567|sp|A9KF31|Y409_COXBN RecName: Full=UPF0761 membrane protein CBUD_0409
gi|189039568|sp|A9N9B0|Y1765_COXBR RecName: Full=UPF0761 membrane protein COXBURSA331_A1765
gi|226736668|sp|B6J517|Y1808_COXB1 RecName: Full=UPF0761 membrane protein CbuK_1808
gi|226736669|sp|B6J454|Y433_COXB2 RecName: Full=UPF0761 membrane protein CbuG_0433
gi|29542138|gb|AAO91075.1| ribonuclease BN [Coxiella burnetii RSA 493]
gi|120575784|gb|EAX32408.1| YihY family protein [Coxiella burnetii 'MSU Goat Q177']
gi|154356727|gb|ABS78189.1| ribonuclease BN [Coxiella burnetii Dugway 5J108-111]
gi|161762270|gb|ABX77912.1| YihY family protein [Coxiella burnetii RSA 331]
gi|165917501|gb|EDR36105.1| YihY family protein [Coxiella burnetii RSA 334]
gi|212010480|gb|ACJ17861.1| ribonuclease BN [Coxiella burnetii CbuG_Q212]
gi|212013554|gb|ACJ20934.1| ribonuclease BN [Coxiella burnetii CbuK_Q154]
Length = 278
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 50/271 (18%), Positives = 96/271 (35%), Gaps = 5/271 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+F + F EE A+ ++ + LL++ P + L F+ A Q V
Sbjct: 5 RFFKRSAFTLAYIYRRFHEEGCAYRATALAYTTLLALVPLTIVAFTLLSFVPAFQGVGVR 64
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + + + L L GL I+ + + + + +
Sbjct: 65 LQNLIWENFVPTSAGMVAAYLSQLTQNVTGLSIINIFFLGIVALLLMYNINRAFVAIWHT 124
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ LI F +LL+ L + + + L +
Sbjct: 125 EHHFRLSLHFLIYFMVLLLSPFLLGAVMLLGTFLVQ-----SPLVTDLIGWPYLGKGLLF 179
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ +FI + LP+AK K+ + G + T + + + FT Y+ F TY +Y
Sbjct: 180 VLPYVLIFITFTLFNWVLPSAKVKLSHAVIGGLVTTVLFELAKFAFTVYLKFFPTYRVIY 239
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMI 273
L+ I LV+LY+ +LGA ++ +
Sbjct: 240 GALSVIPIFLVWLYVSWTIILLGAVVSNVIA 270
>gi|313772220|gb|EFS38186.1| putative ribonuclease [Propionibacterium acnes HL074PA1]
gi|313807576|gb|EFS46063.1| putative ribonuclease [Propionibacterium acnes HL087PA2]
gi|313810085|gb|EFS47806.1| putative ribonuclease [Propionibacterium acnes HL083PA1]
gi|313820386|gb|EFS58100.1| putative ribonuclease [Propionibacterium acnes HL036PA1]
gi|313822810|gb|EFS60524.1| putative ribonuclease [Propionibacterium acnes HL036PA2]
gi|313825259|gb|EFS62973.1| putative ribonuclease [Propionibacterium acnes HL063PA1]
gi|313830415|gb|EFS68129.1| putative ribonuclease [Propionibacterium acnes HL007PA1]
gi|313833785|gb|EFS71499.1| putative ribonuclease [Propionibacterium acnes HL056PA1]
gi|314925273|gb|EFS89104.1| putative ribonuclease [Propionibacterium acnes HL036PA3]
gi|314959944|gb|EFT04046.1| putative ribonuclease [Propionibacterium acnes HL002PA2]
gi|314976096|gb|EFT20191.1| putative ribonuclease [Propionibacterium acnes HL045PA1]
gi|314978515|gb|EFT22609.1| putative ribonuclease [Propionibacterium acnes HL072PA2]
gi|314983884|gb|EFT27976.1| putative ribonuclease [Propionibacterium acnes HL005PA1]
gi|314988065|gb|EFT32156.1| putative ribonuclease [Propionibacterium acnes HL005PA2]
gi|314989873|gb|EFT33964.1| putative ribonuclease [Propionibacterium acnes HL005PA3]
gi|315084252|gb|EFT56228.1| putative ribonuclease [Propionibacterium acnes HL027PA2]
gi|315085597|gb|EFT57573.1| putative ribonuclease [Propionibacterium acnes HL002PA3]
gi|315088351|gb|EFT60327.1| putative ribonuclease [Propionibacterium acnes HL072PA1]
gi|315095962|gb|EFT67938.1| putative ribonuclease [Propionibacterium acnes HL038PA1]
gi|327326244|gb|EGE68034.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL096PA2]
gi|327331881|gb|EGE73618.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL096PA3]
gi|327445864|gb|EGE92518.1| putative ribonuclease [Propionibacterium acnes HL043PA2]
gi|327448153|gb|EGE94807.1| putative ribonuclease [Propionibacterium acnes HL043PA1]
gi|328753413|gb|EGF67029.1| putative ribonuclease [Propionibacterium acnes HL020PA1]
gi|328760796|gb|EGF74362.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
HL099PA1]
Length = 436
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|317494464|ref|ZP_07952877.1| ribonuclease BN family protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917394|gb|EFV38740.1| ribonuclease BN family protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 327
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 98/271 (36%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A++ F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 42 HIIRAVDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLTELINKIVS 101
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + + A Y + + LR ++ R V R+
Sbjct: 102 SISDPNLANTLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 161
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+Y L F + + L++ A A + K + L ++
Sbjct: 162 QDQEKFYFRYLRDFISLTGLVIALIVSLSFTSIAGAAQASIVKALGLDGIEWLRPVMTAI 221
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +++A ++ +++ L LP K K ++L G + I + V + T + + + S
Sbjct: 222 ALSISIMANYLLFLWIFLVLPRHKPKKKALLRGTLIAAIGFEVIKFVMTWTLPSLA-RSP 280
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 281 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 311
>gi|238783926|ref|ZP_04627943.1| Inner membrane protein yhjD [Yersinia bercovieri ATCC 43970]
gi|238715165|gb|EEQ07160.1| Inner membrane protein yhjD [Yersinia bercovieri ATCC 43970]
Length = 328
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPALAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F ++ V L+I + A + + + L +
Sbjct: 161 QDQEKFYYRYARDFISLIGLVVALIITLSLTSIAGAAQSAIVNALGLGGIEWLRPAMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 AMSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFVMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 310
>gi|327443083|gb|EGE89737.1| putative ribonuclease [Propionibacterium acnes HL013PA2]
Length = 436
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFE 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|41409550|ref|NP_962386.1| hypothetical protein MAP3452c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398381|gb|AAS06002.1| hypothetical protein MAP_3452c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 342
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 94/271 (34%), Gaps = 9/271 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
D + A + F + +G A+ ++ + ++FP ++ G + GF+ A Q + ++ D
Sbjct: 19 WLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARRPQLLSSIDDH 78
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--V 123
+ + + + + + + I A + + LR +L + +
Sbjct: 79 IRSQVNGALGNQLQELMNSAIDA-RTSVGVIGLATAVWAGLGWISHLRQALTEMWWDTQI 137
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNG 180
E + +L ++ +V + A + + + + W
Sbjct: 138 ESPGFVRNKLSDLLAMVGTFAVIVATVGLTTVGHAAPMAALLKWLGIPQFVVFDWLFWIF 197
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I L ++ ++ LP K + + + I + V + + Y+ T S
Sbjct: 198 SILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEVFKQVASIYLRTVL-RSP 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ +VF Y+ + A+
Sbjct: 257 AGAAFGPVLGLMVFAYITAYLVLFCTAWAAT 287
>gi|314966706|gb|EFT10805.1| putative ribonuclease [Propionibacterium acnes HL082PA2]
Length = 436
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 96/278 (34%), Gaps = 13/278 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTV 62
+ A F G A+ I+ +L++ P I F + G + + + V
Sbjct: 29 RHSIAHLLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQV 88
Query: 63 IDVVFGAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+D V G E + I I + + F +S L A + V +R + +
Sbjct: 89 VDSVVGLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEW 148
Query: 121 -----RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNL 173
V + R + +L L + ++ + ++ +
Sbjct: 149 APDFDMVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGY 208
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ + AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 209 GLLLTLAGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVGAG-YLV 267
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 268 RAFNSNKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|189426008|ref|YP_001953185.1| ribonuclease BN [Geobacter lovleyi SZ]
gi|189422267|gb|ACD96665.1| ribonuclease BN [Geobacter lovleyi SZ]
Length = 286
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 90/259 (34%), Gaps = 5/259 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + F G AS +S L++ P + + +G + + +
Sbjct: 11 RTIHAVWQRFGRHQGMLRASALSFDTTLALVPVLALIFVILQTVGVQELLE---PFILQQ 67
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ V GL + S L + +E++R + N + E RS
Sbjct: 68 LTGNSSVIAAKVHEYVRNTRVAGLGSFSTLLLVFTLLFLLESIREAFNAIWGAAEQRSLL 127
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L + + L + + ++ ++ + L
Sbjct: 128 RRGLDYLLVLAAVPLLLTTAIGMTSLLQS--QWLVQWLINNTRFGDGVLLLFRLTPFLCS 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L+ V+L LP K ++ S L G + W + ++ + + Y+ +Y L+ +
Sbjct: 186 SLVLVLVYLLLPGVKVRLASALTGGVAAGACWQLAHWVYFRFQFGVTRYNAIYGALSLLP 245
Query: 250 TCLVFLYMLGVFFILGAEL 268
L+++Y + +LG EL
Sbjct: 246 FLLIWIYTSWLVVLLGFEL 264
>gi|313812885|gb|EFS50599.1| putative ribonuclease [Propionibacterium acnes HL025PA1]
Length = 436
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|167577276|ref|ZP_02370150.1| YihY family protein [Burkholderia thailandensis TXDOH]
gi|167615416|ref|ZP_02384051.1| YihY family protein [Burkholderia thailandensis Bt4]
gi|257141989|ref|ZP_05590251.1| YihY family protein [Burkholderia thailandensis E264]
Length = 307
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/256 (18%), Positives = 92/256 (35%), Gaps = 5/256 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA F + +MA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFRRFSADRCSSMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + E R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLAIGASATFASLNTALSVIWPATETRASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ + I + + L
Sbjct: 142 LGLVRVRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVAIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFILG 265
L++LY +LG
Sbjct: 261 VLLMWLYFSAAVLLLG 276
>gi|53716329|ref|YP_106262.1| putative ribonuclease BN [Burkholderia mallei ATCC 23344]
gi|124381375|ref|YP_001025680.1| putative ribonuclease BN [Burkholderia mallei NCTC 10229]
gi|217422203|ref|ZP_03453706.1| putative ribonuclease BN [Burkholderia pseudomallei 576]
gi|237509729|ref|ZP_04522444.1| YihY family protein [Burkholderia pseudomallei MSHR346]
gi|238563035|ref|ZP_00439487.2| YihY family protein [Burkholderia mallei GB8 horse 4]
gi|254359240|ref|ZP_04975512.1| putative ribonuclease BN [Burkholderia mallei 2002721280]
gi|52422299|gb|AAU45869.1| putative ribonuclease BN [Burkholderia mallei ATCC 23344]
gi|148028427|gb|EDK86387.1| putative ribonuclease BN [Burkholderia mallei 2002721280]
gi|217394434|gb|EEC34453.1| putative ribonuclease BN [Burkholderia pseudomallei 576]
gi|235001934|gb|EEP51358.1| YihY family protein [Burkholderia pseudomallei MSHR346]
gi|238521458|gb|EEP84909.1| YihY family protein [Burkholderia mallei GB8 horse 4]
gi|261826285|gb|ABM99270.2| putative ribonuclease BN [Burkholderia mallei NCTC 10229]
Length = 307
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 261 VLLMWLYFSAAVLLL 275
>gi|315103367|gb|EFT75343.1| putative ribonuclease [Propionibacterium acnes HL050PA2]
Length = 436
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 96/278 (34%), Gaps = 13/278 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTV 62
+ A F G A+ I+ +L++ P I F + G + + + V
Sbjct: 29 RHSIAHLLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQV 88
Query: 63 IDVVFGAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+D V G E + I I + + F +S L A + V +R + +
Sbjct: 89 VDSVVGLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEW 148
Query: 121 -----RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNL 173
V + R + +L L + ++ + ++ +
Sbjct: 149 APDFDMVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGY 208
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ + AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 209 GLLLTLAGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVGAG-YLV 267
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 268 RAFNSNKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|187477087|ref|YP_785111.1| BrkB [Bordetella avium 197N]
gi|115421673|emb|CAJ48183.1| BrkB [Bordetella avium 197N]
Length = 299
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 105/281 (37%), Gaps = 10/281 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
+ ++ D+ + + + + ++L + S+ P ++ +AG F G +
Sbjct: 13 RALAQLLMDSAKQWSRHRASSKGAALALYMVFSLAPMLILVIAVAGAFFGEDTVRSELFA 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVV 123
+ E A+ I + L + +L + ++ L+ SL+ +
Sbjct: 73 QMSDLMGERGAEVIHTVLASAHESSKSWLAALLSLGMMVFSATTAFSELKDSLDELWETK 132
Query: 124 EMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
++ +R++SFG VL+ + ++ V A+ +A AY + + +
Sbjct: 133 PNQASGGIQGLVRSRILSFGLVLVLACFMLFSLAVNAAMGVARAYYGELWSYSLVATAGV 192
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
W ++ + + + LP+ +LPG + T +++G Y+
Sbjct: 193 WVANLF-SFSVVTALFAVIFKLLPSISLPWRQVLPGAVVTAALFLLGKWGIGLYLSH-GG 250
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++ Y S++ L+++Y F GA L R
Sbjct: 251 VASAYGAAGSLIAFLLWIYYSSQIFFFGAVLTRQYASQAQR 291
>gi|67920991|ref|ZP_00514510.1| Ribonuclease BN [Crocosphaera watsonii WH 8501]
gi|67857108|gb|EAM52348.1| Ribonuclease BN [Crocosphaera watsonii WH 8501]
Length = 308
Score = 102 bits (254), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 100/291 (34%), Gaps = 18/291 (6%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVID 64
+ + + + ++D M + +S A+ S+FP ++ ++ GF+ ++
Sbjct: 13 KIIQLFTGTLIKWQQDDCIEMGAALSYYAIFSLFPILLVILSITGFILGPDTNAYTQILI 72
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ A+P + +LQ+ + G I +S AL +N+ ++V
Sbjct: 73 LAKTAFPIEAYHIVETTLLQL-NTSSLGAGIIGFSILFITASRIFLALSRDVNKIWKVYH 131
Query: 125 MRSWYITRLISFGYVL---------------LASVTLVIMSFVFVAIPLALAYVRKFFPA 169
+ + + L V+L+ + V +
Sbjct: 132 RQYSQNGWFWTVITFIKNQIIAFLLVLSSTALMLVSLLSNIALKVFFKIIQNVENVITWV 191
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ + ++ T L ++F++ LPA K K I G + + + +
Sbjct: 192 RLDEASLWNTLQLGVTYFLLTSVVMFLYKTLPATKVKWSDIWIGALLAVSLFSLLQSSVS 251
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ Y + M L+++++ F+LG E + +K
Sbjct: 252 SGVIRIGEQFRAYGIIGGFMVLLLWIFLTCQIFLLGCEFTYVYTHLFGSRK 302
>gi|313818617|gb|EFS56331.1| putative ribonuclease [Propionibacterium acnes HL046PA2]
Length = 436
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|227832359|ref|YP_002834066.1| hypothetical protein cauri_0531 [Corynebacterium aurimucosum ATCC
700975]
gi|262183781|ref|ZP_06043202.1| hypothetical protein CaurA7_07308 [Corynebacterium aurimucosum ATCC
700975]
gi|227453375|gb|ACP32128.1| putative membrane protein [Corynebacterium aurimucosum ATCC 700975]
Length = 360
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/272 (14%), Positives = 98/272 (36%), Gaps = 10/272 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV--FGANLAGFLGAHQFVPTVIDV 65
D I ++ + + G A+ I+ ++L++FP + A + + +
Sbjct: 37 FIDHIMKMLDRYGSQGGNQFAAGITYFSVLALFPIFMLTVAAAATVLANRPDLMQQLEEQ 96
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE- 124
+ A + IT+ + + ++ I L + + LRI ++ +
Sbjct: 97 ITNAVSGDLGNSITELLHTAIE-QRGAMYGIGGLTTLWSGLGWMNNLRIGISAMWMQDPT 155
Query: 125 --MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWN 179
++ +L ++ V +VI V A L + + + ++
Sbjct: 156 DAPGNFVTKKLSDLLGLIGLLVAMVIAFGVTAAGSSGLTQKIFEWVGIESFPGMGTVLVI 215
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I ++A F+ ++ FLP K S L G + + L + I++ + +
Sbjct: 216 AGIVIGLIANFLVFWWMVAFLPRTKVPTKSGLMGAAIGAVLFEAIKQL-STVIMSSAAGN 274
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ +V +Y++ + + A+
Sbjct: 275 PAGAVFGPVIVLMVVMYLVWRVVLYVSAWTAT 306
>gi|111025356|ref|YP_707776.1| ribonuclease [Rhodococcus jostii RHA1]
gi|110824335|gb|ABG99618.1| possible ribonuclease [Rhodococcus jostii RHA1]
Length = 340
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 97/275 (35%), Gaps = 18/275 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + + ++ F + A+ I+ L +VFP ++ + + GF+ G +I+
Sbjct: 20 ILAVPFAVVQKFGNDQAGGKATIIAFYGLFAVFPLLLLFSTVLGFVLAGHPDLEQRMINS 79
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
V +P + + + + L A Y + +A + ++N + V
Sbjct: 80 VLADFPILGTQLRSST---HPLRGNGWALVLGVLGALYGAQGIGQAAQNAMNTVWNVPFK 136
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
G +L + + I+ + + A
Sbjct: 137 DWPGFVGRRVRGLTILVLLGIGILVSTTL------------IGYAPRFGPLSDAWASAAA 184
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST-MYAG 244
F+ + L +A ++ + G +F + W + + ++ ++ST +Y
Sbjct: 185 AGVNFLVFLVCFTVLTSATVRVRDVAVGAVFATVFWEILQRIGDWFVRYTISHSTDVYGF 244
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A ++ L +LY+ +L AE+N + W +
Sbjct: 245 FAIVLGLLSWLYLGARLTLLAAEINVVLRYRLWPR 279
>gi|314967891|gb|EFT11990.1| putative ribonuclease [Propionibacterium acnes HL037PA1]
gi|315105592|gb|EFT77568.1| putative ribonuclease [Propionibacterium acnes HL030PA1]
Length = 436
Score = 102 bits (254), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|227893136|ref|ZP_04010941.1| possible ribonuclease BN [Lactobacillus ultunensis DSM 16047]
gi|227865002|gb|EEJ72423.1| possible ribonuclease BN [Lactobacillus ultunensis DSM 16047]
Length = 307
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 59/276 (21%), Positives = 120/276 (43%), Gaps = 8/276 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I + + + + I+ L S+FP I+ N+ + +
Sbjct: 13 KFILTLRTTLSQGEIFDSSIVIAYYILFSIFPIIIIIGNVLPLFHIDTA--PIAKYLNVV 70
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--- 126
+P+ +++ I + +L + G + + A + SN V A+R+ NR Y V ++
Sbjct: 71 FPDQVSEFIMPIVNSLLKTTSTGYMSFGIILAVWSFSNLVNAIRLGENRLYGVHQVELKL 130
Query: 127 ---SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++ TR+I+ + L + +S V V L ++ F N + I++ R
Sbjct: 131 SIVNFIWTRMITIAFTALMIIIFTAVSIVLVFGQQLLNVLQPIFHLPVNEINKIFSYRYP 190
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L + + + +++ LP K K I PGVI T I W+ + LF+ Y+ F Y
Sbjct: 191 VVILVMVLAVSYLNYVLPNIKLKKRVIWPGVITTVIGWLGLSFLFSFYLHNFPITWENYG 250
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + +++L + V F++G +NA++I +
Sbjct: 251 IVGTFIIFMLWLNIAAVLFLVGVAVNAAIIHNRVGE 286
>gi|190571310|ref|YP_001975668.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018707|ref|ZP_03334515.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|190357582|emb|CAQ55023.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995658|gb|EEB56298.1| ribonuclease, BN family [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 271
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 125/279 (44%), Gaps = 13/279 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++++ IV+ +Y A+ + DG A ++S LLS+FPF++ +A
Sbjct: 2 LQKFYSIVY-CLYRALIDTIYNDGVEHAGYLSFLILLSIFPFLIVLIAMASTFANFLDQY 60
Query: 61 TVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V + P+ I + I ++++ P + L T++ + A + +S+ +E R LN+A
Sbjct: 61 NVGWAFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAIVGAVWTASSTIEGFRTILNKA 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y+V + R++S L+ ++ + F +P+ + + + +
Sbjct: 121 YKVPVSSPYIWRRVLSILQFLVITLVTTLTIVFFTLVPMLIDFSYQG----------LSY 170
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTY 238
R LF + +++ LP K + + PG I W + A F Y+ +F
Sbjct: 171 TRYLLIEFVLFTIVSWLYFTLPNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQL 230
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +Y L ++ L+F Y+L + FI GA+ N + +
Sbjct: 231 NLIYGSLGGVVVSLLFFYVLSLIFIYGAKFNFQLKYFNG 269
>gi|313827548|gb|EFS65262.1| putative ribonuclease [Propionibacterium acnes HL063PA2]
Length = 436
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|314962741|gb|EFT06841.1| putative ribonuclease [Propionibacterium acnes HL082PA1]
Length = 436
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|313792084|gb|EFS40185.1| putative ribonuclease [Propionibacterium acnes HL110PA1]
gi|313801964|gb|EFS43198.1| putative ribonuclease [Propionibacterium acnes HL110PA2]
gi|313838790|gb|EFS76504.1| putative ribonuclease [Propionibacterium acnes HL086PA1]
gi|315077958|gb|EFT50009.1| putative ribonuclease [Propionibacterium acnes HL053PA2]
gi|327453198|gb|EGE99852.1| putative ribonuclease [Propionibacterium acnes HL092PA1]
Length = 436
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|53722698|ref|YP_111683.1| ribonuclease [Burkholderia pseudomallei K96243]
gi|126456974|ref|YP_001076309.1| putative ribonuclease BN [Burkholderia pseudomallei 1106a]
gi|254186260|ref|ZP_04892778.1| putative ribonuclease BN [Burkholderia pseudomallei Pasteur 52237]
gi|254262938|ref|ZP_04953803.1| putative ribonuclease BN [Burkholderia pseudomallei 1710a]
gi|52213112|emb|CAH39151.1| putative ribonuclease [Burkholderia pseudomallei K96243]
gi|126230742|gb|ABN94155.1| putative ribonuclease BN [Burkholderia pseudomallei 1106a]
gi|157933946|gb|EDO89616.1| putative ribonuclease BN [Burkholderia pseudomallei Pasteur 52237]
gi|254213940|gb|EET03325.1| putative ribonuclease BN [Burkholderia pseudomallei 1710a]
Length = 307
Score = 102 bits (253), Expect = 8e-20, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 261 VLLMWLYFSAAVLLL 275
>gi|268592242|ref|ZP_06126463.1| putative ribonuclease [Providencia rettgeri DSM 1131]
gi|291312291|gb|EFE52744.1| putative ribonuclease [Providencia rettgeri DSM 1131]
Length = 330
Score = 102 bits (253), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 94/274 (34%), Gaps = 11/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
I ++ F + G + I+ + LS+ P ++F AGF+ + + ++
Sbjct: 45 FIAHIIRTVQRFNDRMGNQFGAAITYFSFLSLIPVLMFSFAAAGFVLASNPELLEKLVRG 104
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N V LR+++ R V
Sbjct: 105 ISANITDPTLANTLERTIDTAIRQRTTVGLTGLALAVYSGVNWVNNLRLAILAQSRSVWE 164
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLII 177
R + + F ++ + L++ + A A + + L
Sbjct: 165 RNEDEHENIIFRYIRDFFALIGLLIALIVTITLTSVAGSAQATIVSTLGLDGIEWLKPAW 224
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A F+ +++ LP + + S+ G + I + + + T + ++
Sbjct: 225 TLIGLTISITANFLLFLWIFWILPRMQHRRRSLFKGTLLAAIGFEIIKSIMTWILPNLAS 284
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A S++ + F Y + A A+
Sbjct: 285 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIAT 317
>gi|319939194|ref|ZP_08013557.1| methionine aminopeptidase Map [Streptococcus anginosus 1_2_62CV]
gi|319811590|gb|EFW07866.1| methionine aminopeptidase Map [Streptococcus anginosus 1_2_62CV]
Length = 302
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/284 (19%), Positives = 120/284 (42%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M+++ + + + + + + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKFVSKIGQNPFLQSFFKFYQASEIDLTSIAVAYYLLISIFPLLLIVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ ++ + PE + + + +L P+ GL + S L+A + S + L+ + N+
Sbjct: 59 IAEFLEAMEDVLPESLYEVVAKVTRNLLTQPSSGLLSFSILSALWAFSQSMSFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R RL S L + + + ++L + F+ L +
Sbjct: 119 AYGVAKDRGLISHRLFSLVISLGLQFLFALSLLLTMFGRMSLRLLHSFWEFDDQLYASLQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF+ L+ ++ FLP K + I +LPG IF + V LF+ Y+ T+
Sbjct: 179 RMTQPTIYTLLFLSLLMLYYFLPNVKIRKIRYVLPGTIFVVFTIGVLLNLFSVYLDTYVN 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +SI + +++ ++ I+GA LNAS + ++
Sbjct: 239 HLMDVRFFSSIFVVVVMIWFTLIAQIMIIGAILNASYQGCHEKE 282
>gi|88807156|ref|ZP_01122668.1| hypothetical protein WH7805_11433 [Synechococcus sp. WH 7805]
gi|88788370|gb|EAR19525.1| hypothetical protein WH7805_11433 [Synechococcus sp. WH 7805]
Length = 310
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 98/297 (32%), Gaps = 21/297 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
R + ++ A + + D +++ + L S+FP ++ +LA FL
Sbjct: 4 RLLLRRIVRSLWLAYQRWAGSDCIDLSAAFAYYTLQSIFPILLISLSLASFLLGRQDNLD 63
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I GA P + + Q++ G + A + N L+ +R
Sbjct: 64 QQIIFYASGALPPPAVSIVRQTLNQLV-QQGFGAGLLGAAVLLITAGNVYLTLQRGADRL 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR--------------- 164
+R V + + + + + + + +
Sbjct: 123 WRDVLRPLPESMPFGAQAFQFVRVRIEAFFIVILIGLLIVADQISVNLRMIPAGVVQDFQ 182
Query: 165 ---KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ + L ++ GR+ + + + + LP+ + + ++PG +
Sbjct: 183 QSLPWLGDFLDALPLLQVGRVLFSFVGFSSMALLLQALLPSRRVPFIPLIPGSLLIGFLL 242
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + I++ Y + ++ +++YM+GV G + + + +
Sbjct: 243 TTLNLAVSRSILSLGARFQAYGVIGGVLVLTLWVYMVGVVIYFGQCWSVELALMRQK 299
>gi|126442603|ref|YP_001063408.1| putative ribonuclease BN [Burkholderia pseudomallei 668]
gi|134278383|ref|ZP_01765097.1| putative ribonuclease BN [Burkholderia pseudomallei 305]
gi|254193794|ref|ZP_04900226.1| putative ribonuclease BN [Burkholderia pseudomallei S13]
gi|254201145|ref|ZP_04907510.1| putative ribonuclease BN [Burkholderia mallei FMH]
gi|254205115|ref|ZP_04911468.1| putative ribonuclease BN [Burkholderia mallei JHU]
gi|126222094|gb|ABN85599.1| putative ribonuclease BN [Burkholderia pseudomallei 668]
gi|134250167|gb|EBA50247.1| putative ribonuclease BN [Burkholderia pseudomallei 305]
gi|147748757|gb|EDK55832.1| putative ribonuclease BN [Burkholderia mallei FMH]
gi|147754701|gb|EDK61765.1| putative ribonuclease BN [Burkholderia mallei JHU]
gi|169650545|gb|EDS83238.1| putative ribonuclease BN [Burkholderia pseudomallei S13]
Length = 304
Score = 101 bits (252), Expect = 9e-20, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 199 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 257
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 258 VLLMWLYFSAAVLLL 272
>gi|295838563|ref|ZP_06825496.1| integral membrane protein [Streptomyces sp. SPB74]
gi|197697812|gb|EDY44745.1| integral membrane protein [Streptomyces sp. SPB74]
Length = 332
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 91/262 (34%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E + +A+ ++ ++ L++FP + + V + V P
Sbjct: 23 WRCYERLDDVKWARLAAAMTFTSFLALFPLLTVAVAVVAGAFGQDRVHDLESRVKEQIPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-SWYIT 131
+ + ++ A + ++ A + N V ++R SL +R+ E ++ +
Sbjct: 83 IADQLDLQGLVD----NAGTVGVVAGAALLFTGVNWVGSMRESLRAVWRLPEDPGNFLLA 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLAL 189
+ G ++ V ++ A+ + + ++ + A
Sbjct: 139 KARDTGVLIGLGVAGLVTVVASAVSSTAIGWTTRQLGITEGGAGGVLLRVLSFAVAVGAD 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP ++ + I + + +L YI ++ S MY +
Sbjct: 199 FLVLLYVLSLLPRVHPPRRRLVLAALIGAIGFELLKLLIGGYISGVASKS-MYGVFGVPI 257
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A
Sbjct: 258 ALLLWINFTAKLLLYCAAWTAV 279
>gi|300866202|ref|ZP_07110917.1| putative ribonuclease BN [Oscillatoria sp. PCC 6506]
gi|300335795|emb|CBN56077.1| putative ribonuclease BN [Oscillatoria sp. PCC 6506]
Length = 340
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/299 (16%), Positives = 117/299 (39%), Gaps = 28/299 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVF 67
+ + + + ++ +++ ++ +A+L++FP ++ + + ++
Sbjct: 41 WTTLKEVGDRAGKQRLLGLSAEMAYNAMLALFPALLAAIAAIALFESLQSTLYQMARLLG 100
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR- 126
P + I I ++L + +F++S + + S + A +L++ +++ R
Sbjct: 101 EIVPNEVRTLIRSLIQEILQTRNQEIFSVSFIGTLWAFSGVLSAAMAALDQIHQIPADRI 160
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKF------------------- 166
++ +L+S G + + L++ V L + V +
Sbjct: 161 RPFWKAKLVSIGLSIGTIMLLILACGVVFISDLIVQIVARQSCFLETVSNCPFQDISNCQ 220
Query: 167 ------FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
P LL + R T+ + F++ + P+ + ILPG I I
Sbjct: 221 LLPLQSCPLESKLLAVWKLWRWPITLGIVSFAFAFIYRYGPSRHRRGTPILPGAILAAIC 280
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
W + L Y+ F Y+ Y + + + L++L + +LGA+LN ++ RK
Sbjct: 281 WAGISGLLRFYVSHFGNYNWTYGTIGTFIILLLWLNFSSLVMLLGAQLNVTVGKAMKRK 339
>gi|188025424|ref|ZP_02958554.2| hypothetical protein PROSTU_00299 [Providencia stuartii ATCC 25827]
gi|188023722|gb|EDU61762.1| hypothetical protein PROSTU_00299 [Providencia stuartii ATCC 25827]
Length = 328
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 98/274 (35%), Gaps = 11/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + F + G + I+ + LS+ P ++F AGF+ + + ++
Sbjct: 42 FIAHLIRTAQRFTDRMGNQFGAAITYFSFLSLIPVLMFTFAAAGFVLASNPELLERLVRG 101
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + + A Y N V LR+++ R V
Sbjct: 102 ISASISDPTLANTLERTIDTAIRQRTTVGLTGLALAVYSGVNWVNNLRLAILAQSRPVWE 161
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R+ Y L F ++ + L++ + A A + + + L
Sbjct: 162 RNEDEHEKIYFRYLRDFLSLIGLLIALIVTITLTSVAGSAQATIVRTLGLDNIEWLKPAW 221
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +++A F+ +++ LP + + S+L G + I + V + T + ++
Sbjct: 222 TLIGLTISIIANFLLFLWIFWILPRMQHRRSSLLKGTLLAAIGFEVIKSIMTWILPNLAS 281
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A S++ + F Y + A A+
Sbjct: 282 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIAT 314
>gi|270292449|ref|ZP_06198660.1| putative ribonuclease BN [Streptococcus sp. M143]
gi|270278428|gb|EFA24274.1| putative ribonuclease BN [Streptococcus sp. M143]
Length = 294
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 112/272 (41%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + + D + ++ L+S+FP ++ N+ + + + +
Sbjct: 13 LLKAFLHFYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP--ISNFLLTIKEFV 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTVYDVVAKIAREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNKAYGVAKSRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ + + L ++ ++ + + + LF
Sbjct: 131 HQLMSLLVSFGLQILFALALFLSMFGRMLLNLLKTYWQSDSPFFDYLQDFTGPLIYALLF 190
Query: 191 IGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+ ++ FLP + + PG IF ++ V +F+ Y + + +SI+
Sbjct: 191 AILVMLYYFLPNVRVPRIRYVFPGSIFVLLTLVFLLNIFSVYFNNYVNHLVDVRFFSSII 250
Query: 250 TC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + ++ I+GA +NAS+ K
Sbjct: 251 VVVMMFWFILIAKILIIGAVINASVQSLKEPK 282
>gi|332163398|ref|YP_004299975.1| hypothetical protein YE105_C3778 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325667628|gb|ADZ44272.1| hypothetical protein YE105_C3778 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 329
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAELINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F + + L+I + A + + + L ++
Sbjct: 161 QDQEKFYYRYARDFVSLTGLVIALIITLSLTSIAGAAQSAIVDALGLGGIEWLRPVMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 ALSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 280 SSAAFGSVIGLMAFFYFFARLTLFCAAWIAT 310
>gi|242311868|ref|ZP_04810885.1| putative ribonuclease BN [Burkholderia pseudomallei 1106b]
gi|254185027|ref|ZP_04891616.1| putative ribonuclease BN [Burkholderia pseudomallei 1655]
gi|184215619|gb|EDU12600.1| putative ribonuclease BN [Burkholderia pseudomallei 1655]
gi|242135107|gb|EES21510.1| putative ribonuclease BN [Burkholderia pseudomallei 1106b]
Length = 304
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 199 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 257
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 258 VLLMWLYFSAAVLLL 272
>gi|296876699|ref|ZP_06900747.1| possible ribonuclease BN [Streptococcus parasanguinis ATCC 15912]
gi|296432201|gb|EFH18000.1| possible ribonuclease BN [Streptococcus parasanguinis ATCC 15912]
Length = 323
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 53/284 (18%), Positives = 112/284 (39%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ V D I + + + + ++ L+S+FP ++ AN+ +
Sbjct: 1 MKKVIKKVLDQPFIKGFVRFYQSAESDITSIAVAYYLLISIFPLMLIAANILPYFHIRPT 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + + I VL P+ GL + S ++A + S + L+ + N+
Sbjct: 61 --QILLSLQKVLPASLYRIVAQMISSVLTKPSTGLLSFSIVSALWIFSQSIAYLQRAYNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+Y V + R RL SF + + + + + Y+ + F + + +
Sbjct: 119 SYGVEKERGIIWGRLFSFLISFALQGLFGLSLILSMFGKMIVRYLYRTFSFDRTIYVRLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N L LF+ L+ ++ LP K +LPG F +F Y+ + +
Sbjct: 179 NLTEPTIYLLLFVSLVLLYYTLPNVKIPKFRYVLPGATFVVAVLYAILNIFWKYVDRYVS 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ + + ++ I+G LNAS+ K
Sbjct: 239 HFLDARFFGSVVLAVIMFWFILVAKIMIIGCILNASIQFAREAK 282
>gi|237653286|ref|YP_002889600.1| ribonuclease BN [Thauera sp. MZ1T]
gi|237624533|gb|ACR01223.1| ribonuclease BN [Thauera sp. MZ1T]
Length = 304
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 111/285 (38%), Gaps = 12/285 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
+I ++ ++E + A+ ++ + SV P ++ +L G + G
Sbjct: 6 PSILQYWSAVIRTTVKLWLEAQVFVHAAALAFFTVFSVAPVVIIAVSLVGLVLGESAAQG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRA 119
+ + + A +A I ++ + L TI+ + A F ++ ++ SLN
Sbjct: 66 RIAEQLEVAIGPEVAAAIQTAVVNSRIQHSGLLPTIAGVGAIVFGATTVFTQMQESLNAI 125
Query: 120 YRVVEMRS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V + TRL+S VL L++ + + + +A+ + + P
Sbjct: 126 WGVAPRPTRSGVFIHLKTRLLSLAVVLGIGFVLLVSLSLSIFVRALVAFAQDWLPVP--- 182
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ +I +L + + + LP +LPG T + + +G L Y+
Sbjct: 183 VGLIIGLDWVIALLVVTLLFATIFRVLPEVVLGWRDVLPGAFVTALLFALGRALIAIYLS 242
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
T +T ++ Y S++ L+++ + + GA + + R
Sbjct: 243 TTAT-ASTYGAAGSLVLLLLWVNYSSLILLFGAAFTRAYLEARGR 286
>gi|194364102|ref|YP_002026712.1| ribonuclease BN [Stenotrophomonas maltophilia R551-3]
gi|194346906|gb|ACF50029.1| ribonuclease BN [Stenotrophomonas maltophilia R551-3]
Length = 314
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 56/274 (20%), Positives = 100/274 (36%), Gaps = 19/274 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ FVE D A+ +S ALLS+ P +V L L T+I +
Sbjct: 33 MAVAKRFVEIDVLTQAASVSFYALLSMAPLLVLLLWLTASL-YPPAQQTLISQIGSVAGS 91
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
+A + + P+ G S L ++ L+ +LNR + R
Sbjct: 92 SVASVADTVLHNANSQPSVGSLAGLWSTLLLFIGATAVFAQLQNALNRIFHTSGQRLEGV 151
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG VL L++ A+ + A + P +
Sbjct: 152 KAWLRKRVFSFGVVLALGFLLILSMTATTALQVVFAQLPSVLP----------AIGYLTS 201
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + F++ +LP + G T + + +G YI T + S Y +
Sbjct: 202 LLLYTLAFAFLYHYLPDRRVAWRQAFIGGAITSVLFTLGRYGIGVYIATVAPGSA-YGSM 260
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ LV++Y F +GA + A + +
Sbjct: 261 GALVISLVWIYYATAVFFVGALMTAVIDERQHAR 294
>gi|158317708|ref|YP_001510216.1| ribonuclease BN [Frankia sp. EAN1pec]
gi|158113113|gb|ABW15310.1| ribonuclease BN [Frankia sp. EAN1pec]
Length = 390
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 94/272 (34%), Gaps = 7/272 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVP 60
D A + + G +A+ + A LS FP + ++AGF+
Sbjct: 23 RRRRPFIDHTVRAYGRYTSDGGDRLAASTTYFAFLSFFPIVALVFSIAGFVVDAYPDAQA 82
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + P + K I LA + S +++R+ +++
Sbjct: 83 KLTEQINDYLPGLADKLDVSTIGHAKVGAGLIGLAGLLLAGLAWVSALRDSIRLVWHQSL 142
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E ++ + RL + +TL+ V A ++ G+ G
Sbjct: 143 ---ETGNFIMQRLRDIAILTGLGLTLLASLVVTSLATSATGVFLRWVGLEGSTAAAWATG 199
Query: 181 RIYATMLALFIGLIFVHLFL-PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + +FV++F ++ +L + + +L T + ++ +
Sbjct: 200 LLALMVALAIDAAVFVYIFWRLPERTNRQRVLRAAALGAVGIELLKLLGTWLVGQTTS-N 258
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+Y A ++ L+++ ++ + + A +
Sbjct: 259 PVYGIFAVMVGLLIWINIVMRWMLFVAAWAVT 290
>gi|238757388|ref|ZP_04618574.1| Inner membrane protein yhjD [Yersinia aldovae ATCC 35236]
gi|238704427|gb|EEP96958.1| Inner membrane protein yhjD [Yersinia aldovae ATCC 35236]
Length = 329
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAGLINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPTLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F + + L+I + A + + + L ++
Sbjct: 161 QDQEKFYYRYARDFVSLTGLVIALIITLSLTSIAGAAQSAIVNALGLGGIEWLRPVMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 ALSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 310
>gi|187924332|ref|YP_001895974.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
gi|187715526|gb|ACD16750.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
Length = 305
Score = 101 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 91/266 (34%), Gaps = 5/266 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGA 69
++ DA+E F + M + I + S+ P ++ + G+ G +
Sbjct: 21 VMKDAVERFSSDRCAMMGASIGFYSAFSLAPTLLIVLAITGWFVGRDIAQGRFFGQIRQL 80
Query: 70 WPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A + + + + S + +S L +L+ + +
Sbjct: 81 LGNDAATAMQAVVEHAHRSNGSGMAAAFSVVLLLVGASATFSCLNTALDVVFAAKSPKGL 140
Query: 129 Y--ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + L + L + V + + AL L ++ + +
Sbjct: 141 AGLAWVIRARLVSLGLLMGLSFLLVVSLVLDAALQTAGSAVFGNSTLSVVADVAQSVFGL 200
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L GL + +LP + S L G + + VG LF Y+ T
Sbjct: 201 VILTFGLGALIKWLPDKRVNFRSALIGGAVAALLFTVGRHLFGFYLAHAGTAGAF-GAAG 259
Query: 247 SIMTCLVFLYMLGVFFILGAELNASM 272
S+ +++LY + F+ GAE+ AS+
Sbjct: 260 SLAVLMMWLYFCAIVFLFGAEVTASL 285
>gi|254776742|ref|ZP_05218258.1| hypothetical protein MaviaA2_19026 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 342
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/271 (14%), Positives = 94/271 (34%), Gaps = 9/271 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
D + A + F + +G A+ ++ + ++FP ++ G + GF+ A Q + ++ D
Sbjct: 19 WLDHLIRAYQRFDDRNGGFFAAGLTYYTIFALFPLLMVGFAVFGFVLARRPQLLSSIDDH 78
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--V 123
+ + + + + + + I A + + LR +L + +
Sbjct: 79 IRSQVNGALGNQLQELMNSAIDA-RTSVGVIGLATAVWAGLGWISHLRQALTEMWWDTQI 137
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL---LIIWNG 180
E + +L ++ +V + A + + + + W
Sbjct: 138 ESPGFVRNKLSDLLAMVGTFAVIVATVGLTTVGHAAPMAALLKWLGIPQFVVFDWLFWIF 197
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
I L ++ ++ LP K + + + I + V + + Y+ T S
Sbjct: 198 SILIATLVSWLLFTWMIARLPREKVSFVDSMRAGLIAAIGFEVFKQVASIYLRTVL-RSP 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ +VF Y+ + A+
Sbjct: 257 AGAAFGPVLGLMVFAYITAYLVLFCTAWAAT 287
>gi|305679954|ref|ZP_07402764.1| putative ribonuclease [Corynebacterium matruchotii ATCC 14266]
gi|305660574|gb|EFM50071.1| putative ribonuclease [Corynebacterium matruchotii ATCC 14266]
Length = 367
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 97/275 (35%), Gaps = 8/275 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVP 60
FD + E + G A+ I+ ++LS+FP ++ +A + +
Sbjct: 32 RRRWGWFDHLMLMNERYTSIGGNQFAAGITYFSVLSMFPLLMIVFAVAATVLASRPDLLS 91
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS----L 116
+ + + + + K + + ++ + L+ + + A + +N + LR +
Sbjct: 92 QINNQLTTSIGGELGKTLHNILITAVD-QRGSLYGVGGVTALWTGTNWMNNLRYAISKIW 150
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N + + L+ +L+ + V ++ V + + + +
Sbjct: 151 NYSSDAKNFVITKLVDLLELVLLLVLLIVAVGITAVGNSGLSRSLLAFLRLDHIPGIGAV 210
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ ++A F+ + + +P + S G I I+ + L + + T
Sbjct: 211 TVAVALILGLVANFLVIYTLIKIIPHGEVPRKSAFQGSIIGAIALEIFQQLGSVFFATAI 270
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
T + A I+ +V Y++ + A+
Sbjct: 271 T-NPAGATFGPIIGVMVLFYLIWRIVLYCNAWAAT 304
>gi|254301308|ref|ZP_04968752.1| putative ribonuclease BN [Burkholderia pseudomallei 406e]
gi|157811106|gb|EDO88276.1| putative ribonuclease BN [Burkholderia pseudomallei 406e]
Length = 304
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 199 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 257
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 258 VLLMWLYFSAAVLLL 272
>gi|163788022|ref|ZP_02182468.1| hypothetical protein FBALC1_06573 [Flavobacteriales bacterium
ALC-1]
gi|159876342|gb|EDP70400.1| hypothetical protein FBALC1_06573 [Flavobacteriales bacterium
ALC-1]
Length = 315
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 112/275 (40%), Gaps = 5/275 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V+D++ + V+ AS I+ S ++FPF++F L + F +D +
Sbjct: 35 VYDLLELYVLGIVKGTLTTRASAIAFSFFTAIFPFLLFVIILMPHIPIEGFQKEFLDFLN 94
Query: 68 GAWPEVIAKP-ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + +++ + GL + L + +NGV A+ +Y R
Sbjct: 95 SVLPPQTSDFFVSNIFDNISGGTGTGLLSSVFLLSMLLMANGVNAVFSGFENSYHEQLTR 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL----LLIIWNGRI 182
+ + L + G L+ +V +++ VF + + + + I +
Sbjct: 155 NVFQQYLYALGVALILAVLVLLTVAVFGYFQIYIIAPIYKTFTGEAVTVSGIGWIIFAKY 214
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++ +++ ++ F G + T + ++ + LF YI FS Y+ +Y
Sbjct: 215 MFFVIMVYMATATLYYFGTKEGRYTRFFSVGALLTTLLIILTSYLFGIYIDNFSQYNKLY 274
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +++ L++L++ +LG ELNAS+ +
Sbjct: 275 GSIGALLILLLYLWLNSNILLLGYELNASLRRLHK 309
>gi|238787708|ref|ZP_04631505.1| Inner membrane protein yhjD [Yersinia frederiksenii ATCC 33641]
gi|238724051|gb|EEQ15694.1| Inner membrane protein yhjD [Yersinia frederiksenii ATCC 33641]
Length = 329
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 93/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 41 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFAAVGFVLASNPDLLAGLINKIVN 100
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS- 127
+ + + A Y + + LR ++ R V R+
Sbjct: 101 TISDPSLAATLKNTVNTAIQQRTTVGLTGLAIALYSGISWMGNLREAIRAQSRDVWERNP 160
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+Y F + + L+I + A + + + L ++
Sbjct: 161 QDQEKFYYRYARDFISLTGLVIALIITLSLTSIAGAAQSAIVNALGLGGIEWLRPVMTLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP K K ++L G + I + + + T + ++ S
Sbjct: 221 ALSISIAANYLLFLWIFWILPRHKPKKKALLRGTLIAAIGFEIIKFIMTMMLPRLAS-SP 279
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 280 SGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 310
>gi|291566221|dbj|BAI88493.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 418
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 99/254 (38%), Gaps = 28/254 (11%)
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ + +++ PE + K I + Q + LF+ S + + + S + +
Sbjct: 159 LQSTLLEMANLLGEVVPEQVQKLIGATMSQSGRSLSPRLFSFSFIISIWLFSGVISSAME 218
Query: 115 SLNRAYRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK------- 165
+LNR ++V + R ++ ++LI+ L + L++ + + +
Sbjct: 219 ALNRIHQVPQEKIRPFWKSKLIAIALTLGTLLLLIMALGAVFISDFLVEIIARKSCILET 278
Query: 166 -------------------FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
LL + T+ + F++ + P+ +
Sbjct: 279 VGNCPLDKIDMCLAQEPVQDCLLQSTLLDTWNRLQWPITLGIVSTNFAFIYRYGPSYRKP 338
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
++PG I I W + + LF Y+ Y+ +Y + + + L++L + + ++GA
Sbjct: 339 KTPLIPGSILAAIFWALISNLFRWYVYQSEYYNLIYGAIGTFIVLLLWLNISSLVVLMGA 398
Query: 267 ELNASMIIYYWRKK 280
+LNA++ R+K
Sbjct: 399 QLNATVGDEIRRRK 412
>gi|254428557|ref|ZP_05042264.1| YihY family protein [Alcanivorax sp. DG881]
gi|196194726|gb|EDX89685.1| YihY family protein [Alcanivorax sp. DG881]
Length = 303
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 99/284 (34%), Gaps = 6/284 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
M+ F I + + ++E + + A ++ L S+ P I+ + + + +
Sbjct: 1 MKAIALYWFGIFKNTVRLWLEGNAVSYAGSLAFFTLFSLAPVIILAVKVISLVMTSDAAM 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
++ + A + + I A L +S L ++ ++ S+N
Sbjct: 61 TEILGQLEATIGPEAANEVRNAIANTQAPSQGLLAGMLSLLVMIIGATTVFAQMQRSMNA 120
Query: 119 AYRVVEMRSWYI---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ V+ S + + ++ + + A + L
Sbjct: 121 IWEVMPRPSRNTIAALIKSRLLSLTVVISLGFVLLVSLLLNVVVQAIIVYAESWLPIHGA 180
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + ++L + + + LP +++P + T I + VG L Y+
Sbjct: 181 VVVVVEMSVSLLVIGLLFGTMFRVLPDVVLNWKAVMPAALVTAILFSVGRALIGLYLAHT 240
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T ++ Y S++ L+++Y + + GA + K
Sbjct: 241 AT-ASTYGAAGSLVVLLMWVYYSSMILLFGAAFTRAHCEARGLK 283
>gi|190572510|ref|YP_001970355.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
gi|190010432|emb|CAQ44040.1| putative ribonuclease [Stenotrophomonas maltophilia K279a]
Length = 306
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 63/288 (21%), Positives = 108/288 (37%), Gaps = 20/288 (6%)
Query: 1 MREYFCIVFDII-YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
+R+Y + D + FV+ D A+ +S ALLS+ P +V L L
Sbjct: 12 LRKYIKRLQDSFPMAVAKRFVDVDVLTQAASVSFYALLSMAPLLVLLLWLTASL-YPPAQ 70
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLN 117
+ID + A + P G S L ++ L+ +LN
Sbjct: 71 QALIDQISSVAGSSAATVAETVLKNADNQPDVGSLAGVWSTLLLFVGATAVFAQLQNALN 130
Query: 118 RAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+R R +W R+ SFG VL L++ + +A A + PALG
Sbjct: 131 LIFRTSGERLEGLKAWLRKRVFSFGVVLALGFLLILSMTATTVLQVAFAQLPSILPALG- 189
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
++L +G F++ +LP + G + T + +G YI
Sbjct: 190 ---------YVTSLLLYAVGFAFMYHYLPDRRVAWRQAFIGGVITSALFALGRYGIGVYI 240
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
T + S Y + +++ LV++Y V F +GA + A + +
Sbjct: 241 ATVAPGSA-YGSMGALVISLVWIYYATVVFFVGALMTAVIDERLRARH 287
>gi|148240533|ref|YP_001225920.1| ribonuclease BN-like family protein [Synechococcus sp. WH 7803]
gi|147849072|emb|CAK24623.1| Ribonuclease BN-like family protein [Synechococcus sp. WH 7803]
Length = 310
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 96/297 (32%), Gaps = 21/297 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
R + ++ A + + D +++ + L S+FP ++ +LA FL
Sbjct: 4 RLLLRRIVRSLWLAYQRWAGTDCVDLSAAFAYYTLQSIFPILLISLSLASFLLGRQDNLD 63
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I G P + ++Q++ G + A + N L+ +R
Sbjct: 64 QEIISYASGVLPPPAVAIVRQTLIQLV-QQGFGAGLLGAAVLLVTAGNVYLTLQRGADRL 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR--------------- 164
++ + + + + + + + +
Sbjct: 123 WKDALRPLPESIPFGAQAFQFVRVRIEAFFIVILIGLLIVADQISANLRMIPAGVVQDLQ 182
Query: 165 ---KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ ++ +I GR+ + + + LP+ K ++PG +
Sbjct: 183 QTLPWLADFMDVFPLIQVGRVLFSFAGFSAMALLLQALLPSRKVPFPPLIPGSLLIGFLL 242
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
V + + I++ Y + ++ +++YM+GV G + + + +
Sbjct: 243 TVLNLAVSRSILSLGARFQAYGVIGGVLVLTLWVYMVGVVIYFGQCWSVELALLRQK 299
>gi|172040110|ref|YP_001799824.1| hypothetical protein cur_0430 [Corynebacterium urealyticum DSM
7109]
gi|171851414|emb|CAQ04390.1| putative membrane protein [Corynebacterium urealyticum DSM 7109]
Length = 361
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 100/272 (36%), Gaps = 8/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD I E + E+ G A+ I+ ++LS+FP + + + + V+
Sbjct: 36 WPWFDHIMRMNERYGEQGGNQFAAGITYFSVLSIFPLTMLVLATVAIILANNQELLDKVM 95
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D V + + + + K +F+I L A + + + LRI + ++V
Sbjct: 96 DQVTSMGSGEMGDTLGTIVEGAID-QRKSVFSIGLLLALWSGLSWMNHLRIGASEMWKVD 154
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL----AYVRKFFPALGNLLLIIWN 179
+I +S LL + ++++F I + + + I +
Sbjct: 155 NSPENFIKGKLSDLLGLLGLLLALVVAFAVTTIGNSGLTEKLLGVVGLDEVPGIRFITFL 214
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ +LA + ++ ++LP AK S I +++ V T + + +
Sbjct: 215 VALVVALLANLLVFFWLMVYLPRAKVPRKSAFKAAIIGAVAFEVFKQFATMFFSNALS-N 273
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V Y + + + A+
Sbjct: 274 PAGAAFGPIIGVMVLFYFIWRITLYCSAWAAT 305
>gi|86739376|ref|YP_479776.1| ribonuclease BN [Frankia sp. CcI3]
gi|86566238|gb|ABD10047.1| ribonuclease BN [Frankia sp. CcI3]
Length = 411
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 90/273 (32%), Gaps = 9/273 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVP 60
D + A + + G +A+ + A LS FP I + GF+
Sbjct: 23 RRKRPFLDHLVRAYSRYTADGGDRLAASATYFAFLSFFPLIALAFAVTGFVVDAYPDVQE 82
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + K I G+ I ++ALR ++ +
Sbjct: 83 SLTRQINDYLPGLADKLDVASI----GNAKVGVGIIGLAGLLLAGLAWIDALRDAIRLVW 138
Query: 121 R-VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+++ + RL + +TL+ V A + G+
Sbjct: 139 HQDIDVGNIITRRLRDVTVLAGLGLTLLASLVVTSLSTSATGSFLSWIGLSGSTAAAWVT 198
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
G + + +F++LF + + G + + + ++ T + +
Sbjct: 199 GLLALLVALAIDTAVFLYLFWRLPQQTDRVRTVRGAVLGAVGVEILKIVGTWLVGQTMS- 257
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ +Y A I+ L+++ ++ + + A +
Sbjct: 258 NPVYGTFAVIVGLLIWINIVMRWTLFVAAWTVT 290
>gi|251791629|ref|YP_003006350.1| ribonuclease [Dickeya zeae Ech1591]
gi|247540250|gb|ACT08871.1| ribonuclease [Dickeya zeae Ech1591]
Length = 328
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/281 (16%), Positives = 97/281 (34%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A E F + G + I+ + LS+ P ++ AGF+ + +I+ +
Sbjct: 43 HFIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVTFATAGFVLASNPDLLTGLINRIVN 102
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + L A Y N + LR +++ R V R
Sbjct: 103 SISDPNLARTLKNTVNTAVRQRTTVGLTGLLIALYSGVNWIGNLREAIHAQSRDVWERKP 162
Query: 129 Y------ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+ + L F ++ + LVI F+ A A + + + L ++
Sbjct: 163 HEEEKLYLRYLWDFLSLIGLLLALVITLFLTSVAGSAQATIVRALGLGGIDWLRPVMTLI 222
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP + +L G + I + T + +T S
Sbjct: 223 ALSISIFANYLLFLWILWVLPRHNPRRTPLLRGTLMAAIGFEALKFAMTVALPKLAT-SP 281
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ KP
Sbjct: 282 SGAAFGSVIGLMTFFYFFARLTLFCAAWIATADPKAETPKP 322
>gi|56416749|ref|YP_153823.1| hypothetical protein AM555 [Anaplasma marginale str. St. Maries]
gi|222475113|ref|YP_002563529.1| hypothetical protein AMF_412 [Anaplasma marginale str. Florida]
gi|56387981|gb|AAV86568.1| hypothetical protein AM555 [Anaplasma marginale str. St. Maries]
gi|222419250|gb|ACM49273.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 295
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 124/274 (45%), Gaps = 12/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-----FLGAHQFVPTV 62
AI F DG + +++ LL+ FPF+VF + F+ +
Sbjct: 29 FLRCAGLAIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGL 88
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV
Sbjct: 89 VTSLLSELPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRV 148
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R++S L+ + ++ V +P+ L + + + LG +
Sbjct: 149 SAPPPYILGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGY-------IKY 201
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L + + ++ +P + +I ILPG + I W + F+ Y+ F TMY
Sbjct: 202 TLSEVILCLSVALLYFMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMY 261
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L+ I+ ++F Y+L +FFI GAEL+ + +
Sbjct: 262 GNLSGIIASMLFFYILSIFFIYGAELSYRLSKQF 295
>gi|254504096|ref|ZP_05116247.1| YihY family protein [Labrenzia alexandrii DFL-11]
gi|222440167|gb|EEE46846.1| YihY family protein [Labrenzia alexandrii DFL-11]
Length = 305
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/277 (21%), Positives = 120/277 (43%), Gaps = 10/277 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
DI+ ++ + +++ ++ LL++ P + + +A L V +++
Sbjct: 3 LKGWIDILRRTFVQVQADNVFLISAGVAFFFLLALAPALTAFSAIANLLIPQDAVQDLVN 62
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPA-----KGLFTISALAAAYFSSNGVEALRISLNRA 119
V PE ++ I D++ VL + + ++ V A+ ++ A
Sbjct: 63 EVGMILPESSSQLIKDQLETVLDEHDRQTALTLKAVFGLGLSFWAAAAAVRAMMTAITVA 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
YR E R + L + G + A + ++ F+A+P+AL+ + + I
Sbjct: 123 YREEEDRPVWEFHLTALGLTIAALLIGLVAVIAFLALPVALSLLPLSGSSEF----IARL 178
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R ++A+ GL + F P+ + K + G I + W+ G++LFT Y+ + Y
Sbjct: 179 LRWPLLIVAVITGLSITYRFAPSRRQAKARWVTVGAIAGALMWIAGSLLFTTYVEKVANY 238
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
++ L+SI+ L++ + V I GAELNA +
Sbjct: 239 EEVHGALSSIVVLLLWFWFSAVVAIFGAELNAELEHQ 275
>gi|311108697|ref|YP_003981550.1| ribonuclease BN-like family protein 2 [Achromobacter xylosoxidans
A8]
gi|310763386|gb|ADP18835.1| ribonuclease BN-like family protein 2 [Achromobacter xylosoxidans
A8]
Length = 308
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 96/274 (35%), Gaps = 7/274 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGA 69
++ D+ + + + + ++L + S+ P ++ +AG F G + +
Sbjct: 19 LLMDSAKQWSTHRASSKGAALALYMVFSLAPMLILVIAVAGAFFGEDAVRSELFTQLRDL 78
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ A+ I + + IS + ++ L+ SL+ + V +
Sbjct: 79 IGDRGAEVIQTVLASAHESGGGWIAALISIFVLIFSATTAFAELKASLDELWEVSANQKS 138
Query: 129 Y-ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI---YA 184
+ S + L + V +++ LA R ++ L +
Sbjct: 139 GLHGMVRSRMLSFGLVLVLALFLLVSLSVNAGLAAARSYYGDLWTASSFALVAEWISNFF 198
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + LP+AK ++PG I T ++VG Y+ + S Y
Sbjct: 199 SFSIVVALFAVIFKLLPSAKISWPDVIPGAIVTAALFLVGKWGIGVYLSRGAAVSA-YGA 257
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
S++ L+++Y F GA + + R
Sbjct: 258 AGSLIALLLWIYYSAQIFFFGAVFTRQFALRFGR 291
>gi|271502558|ref|YP_003335584.1| ribonuclease [Dickeya dadantii Ech586]
gi|270346113|gb|ACZ78878.1| ribonuclease [Dickeya dadantii Ech586]
Length = 321
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/271 (15%), Positives = 93/271 (34%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ GF+ + +I+ +
Sbjct: 40 HLIRAGERFNDRMGNQFGAAITYFSFLSLIPILMVSFATVGFVLASNPDLLTGLINRIVN 99
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + L A Y N + LR ++ R V R
Sbjct: 100 SISDPNLARTLKNTVNTAVRQRTTVGLTGLLIALYSGVNWIGNLREAIRAQSRDVWERQP 159
Query: 129 Y------ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
+ + L F ++ + L I F+ A A + + + L +
Sbjct: 160 HEEEKLYLRYLWDFLSLIGLLLALGITLFLTSVAGSAQATIVRALGLGGIEWLRPAMTLI 219
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP + +L G + I + + T + +T S
Sbjct: 220 ALSISIFANYLLFLWILWVLPRHNPRRTPLLRGTLMAAIGFEMLKFAMTVALPKLAT-SP 278
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y + A A+
Sbjct: 279 SGAAFGSVIGLMTFFYFFARLTLFCAAWIAT 309
>gi|90579100|ref|ZP_01234910.1| hypothetical protein VAS14_05323 [Vibrio angustum S14]
gi|90439933|gb|EAS65114.1| hypothetical protein VAS14_05323 [Vibrio angustum S14]
Length = 321
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 94/277 (33%), Gaps = 11/277 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVF 67
D + A + F + G + I+ + LS+ P ++ AGF+ A + ++ID +
Sbjct: 36 DHLIRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFILASNASLLNSIIDKIV 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR- 126
+ + + + A Y + + LR ++ R V R
Sbjct: 96 EGVTDPNLATTLKNTVNIAISQRTTVGLSGLAIALYSGISWMGNLREAIRAQTRDVWERK 155
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWN 179
+ + + F + L+ + A A + + L ++
Sbjct: 156 PEDKDHFLLQYVKDFVALTGLVGALIFTVVLTSVAGSAQATIVNALGLEGITWLRPVLTT 215
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A ++ +++ LP + +++ G + I + T + ++ S
Sbjct: 216 TALTISICANYLMFLWIFWMLPKRRFNRWALMKGTLLAAIGFEAIKFAMTFMLPKLAS-S 274
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A SI+ + F Y + A A+ +
Sbjct: 275 PSGAAFGSIIGLMAFFYFFARLTLFCAAWIATANEHR 311
>gi|291436493|ref|ZP_06575883.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
gi|291339388|gb|EFE66344.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 348
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 104/271 (38%), Gaps = 14/271 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ D + +E +A+ + LLSV P ++ L G++ A T+ V
Sbjct: 2 LKDTVNSCMEYRILGLAAEAAFFTLLSVPPLLLSLIGLLGYVDAWTGADTIQSVQRNLLD 61
Query: 72 EVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + V + ++ L A + S V ++ Y +
Sbjct: 62 ASRTVLSDRGVKEIAEPILRDVTKGGRPDVISLGFLIAVWSGSRAVNVFIDTITVMYGLD 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+R TRL++F ++A + + + VA P A+ + + ++
Sbjct: 122 GVRGIVKTRLLAFLLFIVALLIGSVALPLMVAGPDAVVRIVPW------STTLVQILYWP 175
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L ++ +S + +PG + WV+G+ L Y+ + T+Y
Sbjct: 176 VVILLSVAFLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRLYLTSTVEGPTIYG 235
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA+ + L+++ + ++GA +NA++
Sbjct: 236 SLAAPVAVLLWIGVSAFAVLVGAAVNAAIDR 266
>gi|172040451|ref|YP_001800165.1| hypothetical protein cur_0771 [Corynebacterium urealyticum DSM
7109]
gi|171851755|emb|CAQ04731.1| putative membrane protein [Corynebacterium urealyticum DSM 7109]
Length = 379
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 91/284 (32%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVVF 67
I F + +S ++ + P ++ + + Q + + +
Sbjct: 49 IAKRLYAEFFYRGLPDKGATLSFYSIFTAIPTLMAFYAIVMLVLDQNRDQVLGVTGEFIN 108
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P A ++ I ++ + L I+ L A + SS V A S N Y E
Sbjct: 109 RNIPADFATQASNIIEAIIGTTQRSLITLIIAVLFALFSSSAYVRAFSRSANALYGREEG 168
Query: 126 RSWYITRLISFGYVLLASVTLVIMSF-----------VFVAIPLALAYVRKFFPALGNLL 174
RS T L+ +G + LV+++ F I L L L
Sbjct: 169 RSILRTWLVMWGLTIALVAGLVLIAAGFFLREDLLSPFFTHIADPLGLAGLRTFMLDYFL 228
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ R + + ++ P K + G + + + V F Y+
Sbjct: 229 PLWTLLRWPVIFGLSQMLIALLYHVAPNVKQGRFRLFTAGSVSALVVLTLLGVGFRTYLN 288
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F MY L I+ L+M +LG +L+A +
Sbjct: 289 NFLHVG-MYGALGGIIGGFFCLFMANNVLLLGLQLDAELARARE 331
>gi|332667573|ref|YP_004450361.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
gi|332336387|gb|AEE53488.1| ribonuclease BN [Haliscomenobacter hydrossis DSM 1100]
Length = 324
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 95/279 (34%), Gaps = 5/279 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVI 63
F ++ A F+ ++G +++ ++ L S+ P ++ + LG +
Sbjct: 18 FLAFGRLLRLAAWEFLGDNGPKLSASLAYYTLFSMAPMLLIVIAIGSILLGKEAAEGYLY 77
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNRAYRV 122
G A + + I V + + L ++ ++ S+N + +
Sbjct: 78 LQFEGLMGTTGAIQLQELINNVRISGDTPWVTAVGILTFFLGATGVFIEIQDSINIIWSI 137
Query: 123 V--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RSW + ++ V + + + +
Sbjct: 138 RAKPKRSWLRFITTRLVSFSMVVGIGFLLLVSLVLSATLSLLDNWISTNVISFAWLAYII 197
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
T+ + + + LP A+ K +L G FT + +++G + Y+ +T S
Sbjct: 198 SNILTLSIVLLLFAVIFKVLPDAQLKWKDVLVGSAFTAVLFLLGKYVINLYLSQSTTLS- 256
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y G +++ ++++Y GAE + K
Sbjct: 257 VYGGAGAVVLIILWVYYSAFILYFGAEFTKIYANEHGGK 295
>gi|226357037|ref|YP_002786777.1| ribonuclease BN [Deinococcus deserti VCD115]
gi|226319027|gb|ACO47023.1| putative ribonuclease BN; putative membrane protein [Deinococcus
deserti VCD115]
Length = 403
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 111/283 (39%), Gaps = 15/283 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--- 64
+F +I ++ + F ++ +A+ I+ A+ SV P ++F +AG ++ V +
Sbjct: 6 LFTVIKESTQAFGQDKAPRLAAAIAYYAMFSVAPLLLFAVAIAGRFLTNEEVANQLFGPT 65
Query: 65 -VVFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYR 121
++ A + I Q A+ L + L ++ L+ +LN +
Sbjct: 66 GMLARELGADAANFLRSLIPQEDALHKGTLIASIVGFLTLFMGATGLFVQLQDALNSMWG 125
Query: 122 VVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
TR+ISF ++L + L + + + + F A L+ +
Sbjct: 126 ADPGPPKGLMHMVRTRVISFLMIVLIGLLLFVFLGLNTYLSAIANDLGARFGAGTILVRL 185
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ G + L L ++ FLP+ K + +L G T + +G ++ Y +
Sbjct: 186 LTFG---LSALFLTPVFAAIYKFLPSVKLEWHEVLVGGAITAALFTLGQIVIGLYFGRAA 242
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S + +++ L+++Y G+ F GAE+ Y
Sbjct: 243 PGSA-FGAAGALVALLLWIYYSGMIFFFGAEVTWVYSQKYGSH 284
>gi|160881600|ref|YP_001560568.1| ribonuclease BN [Clostridium phytofermentans ISDg]
gi|160430266|gb|ABX43829.1| ribonuclease BN [Clostridium phytofermentans ISDg]
Length = 289
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 125/270 (46%), Gaps = 3/270 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F + +I ++ A ++ + +S FPF +F ++ FL + V++
Sbjct: 3 FISIARVIRVFSHKLRDDYISAFSAQAAFFIFISFFPFAMFLLSIMQFLPFTE--NEVMN 60
Query: 65 VVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+P I + I ++ + + +++ +A + SS G ++ +N Y
Sbjct: 61 ACRSVFPAAIQGFVISIITELYGKATSTAILSVTLVATLWSSSKGFLSIIRGMNGVYANT 120
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E R++ + R+ S Y LL + +++ +FV ++ K FP L L+I + R
Sbjct: 121 ETRNYIVIRIKSAIYTLLFAFMIILFLVIFVFGNQLYLWIVKRFPVLKEFALVIISVRTI 180
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ L + +F+ + +P K+K++ LPG I W++ + L++ YI S YS Y
Sbjct: 181 VGLCLLIVFFLFMFMVIPNRKTKLIKELPGAILASCGWMIFSYLYSFYIDNMSNYSYTYG 240
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMI 273
L +I+ +++LY +GAE+N+ +
Sbjct: 241 SLTAIVLAMIWLYTCMYMMFIGAEVNSVLS 270
>gi|167573492|ref|ZP_02366366.1| putative ribonuclease [Burkholderia oklahomensis C6786]
Length = 307
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 95/255 (37%), Gaps = 5/255 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 23 AFKRFSTDRCSAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGNE 82
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + + ++G IS A +S +L +L+ + R+ +
Sbjct: 83 AAAGVQTIVENAHRSGSRGGIAALISFAMLAVGASATFASLNTALSVIWPATGTRASSVL 142
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ V + + + V + + A+ +V ++ ++I + + L
Sbjct: 143 GLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFVGRWLWGNSPYVVIGNLLQFSIGIAVLA 202
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ I + G I + + + G LF Y+ T S + S
Sbjct: 203 FAFGTLMKFLPDARVSIRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFAV 261
Query: 251 CLVFLYMLGVFFILG 265
L++LY +LG
Sbjct: 262 LLMWLYFSAAVLLLG 276
>gi|325675586|ref|ZP_08155270.1| tRNA-processing ribonuclease BN [Rhodococcus equi ATCC 33707]
gi|325553557|gb|EGD23235.1| tRNA-processing ribonuclease BN [Rhodococcus equi ATCC 33707]
Length = 341
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/276 (16%), Positives = 98/276 (35%), Gaps = 8/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFV 59
+ D + A + ++ G A+ I+ +L++ P ++ +AGF G ++V
Sbjct: 12 QRAARPWLDHLVRAGGRYQQQKGDYYAAGITYFTILAIVPILMVAFAVAGFALAGNPEWV 71
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ D V P + + + I ++ + L AAY + LR +L
Sbjct: 72 DEIQDQVSNNMPGGLGETVNGLIDSAISA-RTSVGVFGLLGAAYAGIGWITNLRDALTAM 130
Query: 120 Y-RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ E ++ IT+L FG +L +++ + +A + + ++ +
Sbjct: 131 WEHTHEAGNFVITKLKDFGALLGLGGAMLVTFGLSALSNGPVARQVVEWLGVEHVTGVGV 190
Query: 179 NGRIYATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
RI + +++ + +P + S I + V + Y+
Sbjct: 191 LLRITSLAISVLATWALLSWVIARMPREAVTLRSAGRAAFAAAIVFEVFRQVGAIYLEAV 250
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A I+ LVF + + A+
Sbjct: 251 SQ-GPAGAAFGPIIGLLVFANLSARLILFATAWAAT 285
>gi|297539635|ref|YP_003675404.1| cyclic nucleotide-binding protein [Methylotenera sp. 301]
gi|297258982|gb|ADI30827.1| cyclic nucleotide-binding protein [Methylotenera sp. 301]
Length = 435
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 96/273 (35%), Gaps = 5/273 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + ++++ F + +++ +S A+ ++ P ++ L L
Sbjct: 26 KQRYSTPLFVLHEMFGAFRRHNVLGLSASLSFYAMFALIPLVLLLFFLLSHLVFTSDYAV 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V + + A + + A+R S
Sbjct: 86 VKLAIITGNLAPKFSSAIMVEVYNTAQQKAAWGAAGLFVLLWTVTPLASAMRTSFYTIAT 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+VE S+ +L V+ V + +F + + + ++ ++
Sbjct: 146 LVEAPSYIHRKLKDIIAVIGMLVLFFLFTFAGLMLEKVITFLGANHQFFQYDMIAALTSL 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ T+L +F + + IL G +FT + W++ FT ++ +Y ++
Sbjct: 206 VLTTLLIAAFYFVFFP-----VRLNLKHILIGALFTAVLWLLMRPAFTLFLSLNESYGSV 260
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ + ++ + +LY F+LG EL A++
Sbjct: 261 FGSMKNLFISITWLYFNFSVFLLGTELIATLRK 293
>gi|119718767|ref|YP_925732.1| ribonuclease BN [Nocardioides sp. JS614]
gi|119539428|gb|ABL84045.1| ribonuclease BN [Nocardioides sp. JS614]
Length = 349
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 106/268 (39%), Gaps = 13/268 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
I + ++ G +A+ I+ A +++FP ++ G ++ GF+ G ++D +P
Sbjct: 24 VIYKYSDDQGNYLAAIITYYAFIAIFPLLLLGTSILGFILQGNPGLESDLLDSALSQFPI 83
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + E + I AL A Y S +AL+ +LN A+ V R
Sbjct: 84 IGDQLGQPE----GLQGSTAGVVIGALVALYGSLGLGQALQNALNIAWSVPRNRRPNP-- 137
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ L S+ L++ + V + + L+ + LG + + A++L +
Sbjct: 138 ----LLLRLKSLGLLLTAGVALLVLSILSALASSTEVLGGTIASYRWPIVIASVLVITTV 193
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLASIMTC 251
L + F A + LPG + W T Y+ + S M ++
Sbjct: 194 LAVLFQFGVARSHDFRAALPGAFTVAVLWQTLQYFGTLYVTNVLTGTSQMNQTFGLVLGL 253
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++ V ++G E+N + W +
Sbjct: 254 IGILFIAAVMGVIGIEVNVVLSHRLWPR 281
>gi|256392588|ref|YP_003114152.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256358814|gb|ACU72311.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 324
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/269 (14%), Positives = 83/269 (30%), Gaps = 2/269 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ DA DG++ A ++L L+ P ++ LA ++ + + +
Sbjct: 44 WTLLRDAFVRLRFGDGFSHARALALQMALAAMPGLIALVGLAQTAHNARWGRALEETIDR 103
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
P + + + + + A + + + NR Y V R
Sbjct: 104 VTPAASRASVDQALRGAGDGGRTAV-WLGLIGALLSLTVAMGQIERGANRIYGVQRDRPS 162
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+F LLA V + + V + + L R L
Sbjct: 163 LAKYSGAFIRALLAGVPVACGLALLVFGGSFGDSLADTYRWSPAALDAWNVVRWPVGALL 222
Query: 189 LFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + P + +L G + W+ VL Y+ ++ Y L +
Sbjct: 223 ALVSAGVLFRKAPRRRQPSATWLLFGAAVSLAVWLAATVLLAWYVEGSHSFGATYGPLTA 282
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ L++ + + G A +
Sbjct: 283 VLAFLLWANLSAIALFYGIAFAAQLESRR 311
>gi|254424387|ref|ZP_05038105.1| YihY family protein [Synechococcus sp. PCC 7335]
gi|196191876|gb|EDX86840.1| YihY family protein [Synechococcus sp. PCC 7335]
Length = 311
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 113/274 (41%), Gaps = 7/274 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAW 70
+ + + + ++AS ++ +++L +FP I+ G + +
Sbjct: 18 VRRVVRNTFRQRLPSLASEMAYNSMLGLFPAILALFTAIGIFSPLQSTFLKLAQQLSEVA 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMRSW 128
P + + I V P++GLF++S A + SS + A +L++ ++ R +
Sbjct: 78 PAGVPELIYGFEAVVTDQPSRGLFSVSFAFALWASSGAMSAAMRALDQMQQIPIRRRRPF 137
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYATM 186
+ RL+S L L+ S A+ + + + R +
Sbjct: 138 WKARLVSITLTLGTIALLISASCFVFISEWAVGQLIYYSRGDIGSWMAKAWGYSRWPLAL 197
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F++ F P+ + I+PG + +SW V + LF Y+ F + +Y+ +A
Sbjct: 198 SIMSSAFAFIYRFGPSRWTPGKPIMPGAVLAALSWAVISSLFRLYVAHFGNF--VYSAVA 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ L++L++ + ++G LN ++ +
Sbjct: 256 TVIVLLLWLWLTSLVMLIGDLLNLTVCRAMIERH 289
>gi|37524325|ref|NP_927669.1| hypothetical protein plu0308 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36783748|emb|CAE12603.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 330
Score = 100 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 95/274 (34%), Gaps = 11/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ A F + G + I+ + LS+ P ++ +AGF+ + +I+
Sbjct: 49 IIAHFIRATLRFNDRMGNQFGAAITYFSFLSLIPILMLSFAIAGFILASNPDLLARLINS 108
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N V LR ++ + V +
Sbjct: 109 IANSISDPTLANTLKNSVDTAIKQRTTVGLTGLAIALYSGVNWVSNLRQAILAQFHPVWV 168
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLII 177
R+ Y ++ + LVI + A A + K + L
Sbjct: 169 RNQEDNEKIYFKYFRDSISLIGLLLALVITLSLTSIAGSAQATIVKMLGLDGIEWLRPSW 228
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + ++ A ++ +++ LP + + ++L G + I + V + T + +
Sbjct: 229 FLIGLAISISANYLLFLWLFWVLPRHQPERKALLKGTLMAAIGFEVIKYIMTMTLPRLAN 288
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A S++ + F Y+ + A A+
Sbjct: 289 -SPSGAAFGSVIGLMTFFYLFARLTLFCAAWIAT 321
>gi|312140774|ref|YP_004008110.1| ribonuclease bn [Rhodococcus equi 103S]
gi|311890113|emb|CBH49431.1| putative ribonuclease BN [Rhodococcus equi 103S]
Length = 341
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/276 (15%), Positives = 98/276 (35%), Gaps = 8/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFV 59
+ D + A + ++ G A+ I+ +L++ P ++ +AGF G ++V
Sbjct: 12 QRAARPWLDHLVRAGGRYQQQKGDYYAAGITYFTILAIVPILMVAFAVAGFALAGNPEWV 71
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ D V P + + + I ++ + L AAY + LR +L
Sbjct: 72 DEIQDQVSNNMPGGLGETVNGLIDSAISA-RTSVGVFGLLGAAYAGIGWITNLRDALTAM 130
Query: 120 Y-RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ E ++ IT+L FG +L +++ + +A + + ++ +
Sbjct: 131 WEHTHEAGNFVITKLKDFGALLGLGGAMLVTFGLSALSNGPVARQVVEWLGVEHVTGVGV 190
Query: 179 NGRIYATMLALFIGLIFVHLF---LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
RI + +++ + +P + S I + + + Y+
Sbjct: 191 LLRITSLAISVLATWALLSWVIARMPREAVTLRSAGRAAFAAAIVFEIFRQVGAIYLEAV 250
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A I+ LVF + + A+
Sbjct: 251 SQ-GPAGAAFGPIIGLLVFANLSARLILFATAWAAT 285
>gi|111023205|ref|YP_706177.1| tRNA-processing ribonuclease BN [Rhodococcus jostii RHA1]
gi|110822735|gb|ABG98019.1| possible tRNA-processing ribonuclease BN [Rhodococcus jostii RHA1]
Length = 340
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 99/276 (35%), Gaps = 8/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
+ FD + A + + ++ G A+ I+ ++L++ P ++ +AGF+ G + +
Sbjct: 11 QRAARPWFDHLMRAAQRYQQQKGDYYAAGITYFSVLALIPILMVAFAIAGFVLAGQPELL 70
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ D + P + + I + + + L AAY + LR +L
Sbjct: 71 QELQDSITKNVPGSLGDTLNTVIDSAI-ASRASVGVLGLLGAAYAGLGWMANLRDALTAM 129
Query: 120 YR-VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI-- 176
+ E + + T+L +L + +V+ +A L ++ +
Sbjct: 130 WESQRESKGFVRTKLGDAAALLGLGLAMVVSLGSSALSSGPVARTVVEVLNLDDVPGVDA 189
Query: 177 -IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ +++A + +V LP S L + + + + + Y+
Sbjct: 190 GLRALSTVVSLVATWAVFAWVIARLPREPVTFRSALKAALLAAVVFEIFKQVGAIYLSAV 249
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ I+ LVF+Y+ + A+
Sbjct: 250 TA-GPAGVAFGPIIGLLVFIYLTCRMLLFSTAWAAT 284
>gi|167850438|ref|ZP_02475946.1| putative ribonuclease [Burkholderia pseudomallei B7210]
Length = 280
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/259 (19%), Positives = 95/259 (36%), Gaps = 5/259 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFILGAEL 268
L++LY +LGAE
Sbjct: 261 VLLMWLYFSAAVLLLGAEF 279
>gi|134099502|ref|YP_001105163.1| ribonuclease BN-like family integral membrane protein
[Saccharopolyspora erythraea NRRL 2338]
gi|133912125|emb|CAM02238.1| integral membrane protein, ribonuclease BN-like family
[Saccharopolyspora erythraea NRRL 2338]
Length = 323
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 98/278 (35%), Gaps = 14/278 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + +A + A+LS+ P ++ G+LG TV V
Sbjct: 28 RLAIGVVRTSARHRITGLAGEAAFFAVLSLPPLLLGLVGTIGYLGDVIGRDTVARVHGAI 87
Query: 70 W--------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
P+ +A+ + + QVL G+ + A + S ++ +++ Y
Sbjct: 88 LVASAAVLSPQGVAEIVEPTLDQVLTTGQAGISVVGFAVAVWSGSRALDVYIDTISVLYG 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R RL+S + + + + + V P L L + ++
Sbjct: 148 LSGYRGLVRQRLMSVLLYTVGLLVGIALLPLMVVGPNVL------MHLLPGMDALVHGVY 201
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L ++ + LPG + W+ G+ Y+ S
Sbjct: 202 WPTVLVLSAAFLSTLYYMSVPVHTPWRENLPGAAAALLVWIAGSAGLRAYLAVTIQSSPF 261
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++ + L++LY+ + ++GA LNA + +
Sbjct: 262 HGALSAPIAVLLWLYVTALAILIGAALNAELDRLNPDR 299
>gi|296138679|ref|YP_003645922.1| ribonuclease [Tsukamurella paurometabola DSM 20162]
gi|296026813|gb|ADG77583.1| ribonuclease [Tsukamurella paurometabola DSM 20162]
Length = 332
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 95/272 (34%), Gaps = 7/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD + A E + ++ G + I+ ++ ++FP + ++ G++ + + +
Sbjct: 9 WPWFDHLMAAAERYQDKKGDYFGAGITYFSVFALFPLAMVAFSVGGYVLINDAELLAELK 68
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-V 122
+ A E + ++++ + + + + +R +L +
Sbjct: 69 MEINSAISEESLRKSVNDLIDQAIGSRGTVGIVGLAGGLWAGLGWMSNVRAALTAMWDSD 128
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA---YVRKFFPALGNLLLIIWN 179
V +++ T+L G ++ V +V + L + L ++
Sbjct: 129 VPKQNFVKTKLQDLGALVGLFVVIVACIALMAVGSSPLTGKILASMGLGDVPGLQGLVTT 188
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ T+LA + FV LP + + L + T +++ + + I
Sbjct: 189 ATVIVTLLAGWALWTFVIAKLPRVQFPWRNALRAGLLTSVAFYIFMQVAALLIGNTMK-G 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ ++F+Y + A+
Sbjct: 248 PAGATFGPILGIMLFIYFTARIVLFATAWAAT 279
>gi|21224436|ref|NP_630215.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|256784372|ref|ZP_05522803.1| integral membrane protein [Streptomyces lividans TK24]
gi|289768251|ref|ZP_06527629.1| integral membrane protein [Streptomyces lividans TK24]
gi|13276834|emb|CAC33952.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289698450|gb|EFD65879.1| integral membrane protein [Streptomyces lividans TK24]
Length = 344
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/199 (18%), Positives = 81/199 (40%), Gaps = 6/199 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + V+ + +I L A + S V ++ Y + +R TRL++
Sbjct: 65 QITEPILDDVMKGGRPDVISIGFLFALWSGSRAVNVFIDTITVMYGLDGVRGIVRTRLMA 124
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
F ++A + I + VA P A+ V + ++ ++ L
Sbjct: 125 FLLFIVALLIGSIALPLMVAGPDAVVRVVPW------STTVVQVLYWPVVIILSVAFLTT 178
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +S + +PG + WV+G+ L Y+ + T+Y LA+ + L+++
Sbjct: 179 LYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRIYLTSTVEGPTIYGSLAAPVAVLLWI 238
Query: 256 YMLGVFFILGAELNASMII 274
+ ++GA +NA++
Sbjct: 239 GVSAFAVLVGAAVNAAIDR 257
>gi|296168848|ref|ZP_06850520.1| ribonuclease [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295896465|gb|EFG76115.1| ribonuclease [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 342
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 94/287 (32%), Gaps = 10/287 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQF 58
+R + FD + A + F +G A+ ++ + ++FP ++ G GF+ + +
Sbjct: 13 LRARYGW-FDHVLRAYQRFDGRNGGFFAAGLTYYTIFALFPLLMVGFAAFGFVLSRRPEL 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T+ D + + + D + + + I A + + LR +L
Sbjct: 72 LKTIADHIRSQVTGALGDQLLDLMNSAIDA-RASVGVIGLATAVWAGLGWISHLRQALTE 130
Query: 119 AYRV--VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-- 174
+ ++ + ++ +L + + A + +
Sbjct: 131 MWWEERIDSPGFVRNKVSDLLAMLGTFAVTMATVGLTTVGHDAPLRALLKWLGIPQFGVL 190
Query: 175 -LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
W I + ++ ++ LP K + + G + + + V + Y+
Sbjct: 191 DWFFWLLSIVISTAVSWLLFAWMIARLPREKVSLADSMRGALIAAVGFEVFKQAGSLYLR 250
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S A ++ +VF Y+ + A+ + +
Sbjct: 251 AVL-RSPAGATFGPVLGLMVFAYITSYLVLFCTAWAATASDHPRARH 296
>gi|88608339|ref|YP_506282.1| YihY family protein [Neorickettsia sennetsu str. Miyayama]
gi|88600508|gb|ABD45976.1| YihY family protein [Neorickettsia sennetsu str. Miyayama]
Length = 279
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 65/271 (23%), Positives = 130/271 (47%), Gaps = 7/271 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AHQFV 59
F ++ ++ + + G A ++S LLS+FPF+ F +AG+ +++
Sbjct: 2 KRTFAVLKISLYNMLYHGGSEYAGYLSFLLLLSIFPFLFFFTAVAGYTANIVGASSYEIT 61
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ V PE I + I I ++L P GL T++ L A + +S+ VE L+ ++N+A
Sbjct: 62 RKLLSVFIENVPENIIEGIMPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKAAVNKA 121
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y + ++ ++ + + I+ +F+ P + K L L W
Sbjct: 122 YN-FGTETLVSEYILRRFVSVIQFLLISIIILIFLLFPTVYPLLTKNVSFLHLLKRPSWL 180
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
T +F + +++F P K K ++PG I W++ ++ F+ Y+ +F+ +
Sbjct: 181 PYSTVTTCCIFCFVSALYIFFPKEKQKFTDVVPGSIMVVSLWILTSIAFSFYLHSFAQMN 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y +A I+ +++ Y+L + FI GAE+NA
Sbjct: 241 IIYGSIAGIIVVMLYFYLLNLCFIYGAEINA 271
>gi|198283685|ref|YP_002220006.1| ribonuclease BN [Acidithiobacillus ferrooxidans ATCC 53993]
gi|198248206|gb|ACH83799.1| ribonuclease BN [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 294
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 102/268 (38%), Gaps = 11/268 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVI 63
+ +F I+ A F +D A ++ + L + P V G +L +G V
Sbjct: 30 WQRMFYRIFRAWHGFWNDDCIDRAGLLAYTTLFGLIPLAVLGFSLWNLVGFSLLHRAQVD 89
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D+V ++ I ++ + A A+ + + A+ N + V
Sbjct: 90 DLVLRSFVPQTGGAILRQVNSIAARGAQMGLFGLLGLGI-TAILLLHAVERHFNAIWGVT 148
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
W +L LV I L ++ L ++ L+
Sbjct: 149 PTCLWCR--------ILRYMAMLVAGPLGIALILPLLGPLQPLLVYLAHIPLLPPVLSHV 200
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
T L + + + ++ LP+A ++ + G + T I + + ++ Y+ FST+ T+Y
Sbjct: 201 LTFLVVTVMMGLLYKILPSAPTRWQDVFLGGVSTAILFEISKMVLAGYL-QFSTFETLYG 259
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
L + L++LYM + GAE+ A+
Sbjct: 260 ALGAFPVFLLWLYMAWASVLFGAEMAAA 287
>gi|281491079|ref|YP_003353059.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
KF147]
gi|281374837|gb|ADA64357.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
KF147]
gi|326406113|gb|ADZ63184.1| tRNA-processing ribonuclease BN [Lactococcus lactis subsp. lactis
CV56]
Length = 301
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 59/282 (20%), Positives = 115/282 (40%), Gaps = 5/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + ++ + F + + ++ LL++FP + N+ FL +
Sbjct: 5 MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHINTTA- 63
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + K I I +L GL ++S LA + S + AL++S+N+AY
Sbjct: 64 -LLSFLSEQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + ++R+I + L + L L V + FP +L + N
Sbjct: 123 EVFNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQVHRLFPFDDHLYRTLHNM 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A +A F+ L+ ++ LP K + + +PG IF+ V Y+
Sbjct: 183 TLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRL 242
Query: 240 TMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ +++ + I+GA LNA K
Sbjct: 243 DDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGK 284
>gi|319951625|ref|YP_004162892.1| ribonuclease bn [Cellulophaga algicola DSM 14237]
gi|319420285|gb|ADV47394.1| ribonuclease BN [Cellulophaga algicola DSM 14237]
Length = 327
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 115/284 (40%), Gaps = 14/284 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-------GAHQFVP 60
++++I + ++ AS I+ S +++FP ++F +L FL G F
Sbjct: 35 LYELIELYLSGIIQGALSTRASAIAFSLFMALFPLLIFLLSLLPFLIPYIQINGETNFES 94
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + P + +Q+ GL + + + + + +NGV A+ +Y
Sbjct: 95 DFLAFLESFLPNATGDYFEEIFIQIKDQKRGGLLSSTFVISIFLVANGVNAIFGGFENSY 154
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-------PALGNL 173
V R+++ L + L+ S+ L++ + FV +
Sbjct: 155 HVNLTRNFFRQYLYALFVGLILSILLIVAAISFVYSEFYIVEYASDLVTKTYGTNLEETD 214
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ + +I ++ ++ ++ F A + G T + ++ + LF Y+
Sbjct: 215 IIGVRIAKILFFIILSYLTTAILYYFGTAEGRQARFFSAGATMTTLLFIFTSYLFGVYVE 274
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ Y+ +Y L ++ +VF+++ +LG ELNA++
Sbjct: 275 KFARYNELYGALGGLLILMVFIWLNSNILLLGFELNATINSVRN 318
>gi|298502451|ref|YP_003724391.1| ribonuclease BN [Streptococcus pneumoniae TCH8431/19A]
gi|298238046|gb|ADI69177.1| possible ribonuclease BN [Streptococcus pneumoniae TCH8431/19A]
Length = 291
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 117/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 6 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 63
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 64 VGEFLCFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 123
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 124 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 183
Query: 179 NGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP KI LPG F + + LF+ Y+ +
Sbjct: 184 GLAGPLIYALLFAILVMLYYFLPNISNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 243
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 244 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLRDP 286
>gi|218550794|ref|YP_002384585.1| hypothetical protein EFER_3505 [Escherichia fergusonii ATCC 35469]
gi|218358335|emb|CAQ90982.1| conserved hypothetical protein; putative inner membrane protein
[Escherichia fergusonii ATCC 35469]
gi|325499076|gb|EGC96935.1| hypothetical protein ECD227_3173 [Escherichia fergusonii ECD227]
Length = 351
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 67 HLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPMLLQDIFNKILL 126
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 127 NISDPALAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERTP 186
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+++ L F ++ + L++ + A + + L
Sbjct: 187 QDQEKFWLKYLRDFISLIGLLIALIVTLSITSIAGSAQQLIINTLHLNSIEWLKPTWRLI 246
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 247 GLAISIFANYLLFFWIFWRLPRHRPRRRALIRGTFIAAIGFEVIKIVMTYTLPSLMK-SP 305
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 306 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAQYKDDPRMP 346
>gi|296120096|ref|ZP_06838650.1| putative ribonuclease [Corynebacterium ammoniagenes DSM 20306]
gi|295967250|gb|EFG80521.1| putative ribonuclease [Corynebacterium ammoniagenes DSM 20306]
Length = 359
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 102/281 (36%), Gaps = 9/281 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
D I + + G ++ ++ ++L++FP + + + + V D
Sbjct: 37 FVDHIMRMQNRYAAQGGNQFSAGVTYYSVLAIFPLFMLMVAVVATVLANREDLLQQVQDA 96
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ GA + + I D ++ + A L + + LRI ++ + +
Sbjct: 97 ITGAVEGDLGQTINDLLVTAIDQRAAMFGVAG-LTTLWSGLGWMNNLRIGISAMWGLDAN 155
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-----LGNLLLIIWNG 180
+ + L + + + V + + F + +I+
Sbjct: 156 EGGNFLKKKFNDLLGLIGLLIAFLVAFGVTAAGTSGIIPQIFDWVGIDHFPGMGWVIFAL 215
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +LA F+ + ++ + LP K + S + G + ++ V L + I++ +T +
Sbjct: 216 GLAVGLLANFLVMWWMIVILPRTKVPLKSGVKGALLGAVALEVIKQL-STVIISSATGNP 274
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A ++ ++ +Y++ + + A+ ++P
Sbjct: 275 AGAVFGPVIVLMIMMYLIWRVVMYISAWTATTEESLALEEP 315
>gi|227502530|ref|ZP_03932579.1| tRNA-processing ribonuclease BN [Corynebacterium accolens ATCC
49725]
gi|227076692|gb|EEI14655.1| tRNA-processing ribonuclease BN [Corynebacterium accolens ATCC
49725]
Length = 389
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 102/284 (35%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVIDVVF 67
++ F + A+ ++ L++ P ++ ++A + + + +
Sbjct: 60 VMRRVWADFFHDALMDRAAAMTYLTLMAFAPTVLAAYSIATLVFSSRRGEVEALTAQFID 119
Query: 68 GAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P +A+ + ++ +G +S L + + +S V A + N Y VE
Sbjct: 120 TYVPRSMAEEAGTIVSSIIGSTREGTFALVVSVLISLFAASAYVRAFSRTANTVYGRVEG 179
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALGNLL 174
R T + + ++ + V++ + + V + G +
Sbjct: 180 RGTIRTWALMWAITVVLVIGAVVVLCANLLRDTVVDSVIEPVALRLGLHGTVDFFGGIFM 239
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ R T++ + + F P + + I G + ++ +V F+ YI
Sbjct: 240 PVWNWLRFPITVVVALALIAVWYHFAPNVRPSRFRWITLGSVVALVTNLVVWGAFSLYIK 299
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ S +Y ++M + +++ ILG +++A ++
Sbjct: 300 YLAGVS-IYGAFGTVMAVFMTVWLSNTMLILGIKIDAEVLRAKE 342
>gi|225020582|ref|ZP_03709774.1| hypothetical protein CORMATOL_00589 [Corynebacterium matruchotii
ATCC 33806]
gi|224946528|gb|EEG27737.1| hypothetical protein CORMATOL_00589 [Corynebacterium matruchotii
ATCC 33806]
Length = 367
Score = 100 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/275 (13%), Positives = 95/275 (34%), Gaps = 8/275 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVP 60
FD + E + G A+ I+ ++LS+FP ++ +A + +
Sbjct: 32 RRRWGWFDHLMLMNERYTSIGGNQFAAGITYFSVLSMFPLLMIVFAVAATVLASRPDLLG 91
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS----L 116
+ + + + + K + ++ + L+ + + A + N + LR +
Sbjct: 92 QINNQLTTSIGGELGKTLHGILISAV-NQRGSLYGVGGITALWTGINWMNNLRYAVSKIW 150
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N + + L+ +L+ + V ++ V + + + +
Sbjct: 151 NYSIDAKNFIITKLVDLLELVLLLVLLIIAVGITAVGNSGLSRSLLAFLRLDHIPGIGAV 210
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ ++A F+ + + +P + S G I I+ + L + + T
Sbjct: 211 TVAVALILGLVANFLVIYTLIKIIPHGEVPRKSAFQGSIIGAIALEIFQQLGSVFFATAI 270
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
T + A I+ +V Y++ + A+
Sbjct: 271 T-NPAGATFGPIIGVMVLFYLIWRIVLYCNAWAAT 304
>gi|255004219|ref|ZP_05279020.1| hypothetical protein AmarV_02438 [Anaplasma marginale str.
Virginia]
Length = 281
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 124/274 (45%), Gaps = 12/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-----FLGAHQFVPTV 62
AI F DG + +++ LL+ FPF+VF + F+ +
Sbjct: 15 FLRCAGLAIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGL 74
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV
Sbjct: 75 VTSLLSELPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRV 134
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R++S L+ + ++ V +P+ L + + + LG +
Sbjct: 135 SAPPPYILGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGY-------IKY 187
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L + + ++ +P + +I ILPG + I W + F+ Y+ F TMY
Sbjct: 188 TLSEVILCLSVALLYFMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMY 247
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L+ I+ ++F Y+L +FFI GAEL+ + +
Sbjct: 248 GNLSGIIASMLFFYILSIFFIYGAELSYRLSKQF 281
>gi|169630108|ref|YP_001703757.1| ribonuclease BN [Mycobacterium abscessus ATCC 19977]
gi|169242075|emb|CAM63103.1| Possible ribonuclease BN [Mycobacterium abscessus]
Length = 320
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 103/279 (36%), Gaps = 13/279 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLGAH 56
+ V ++ ++ +A ++ + +LS+ P + F L G
Sbjct: 10 FGRDVLHVMRRTAVKSWDDSIFAQSAQAAFWQVLSLPPLLLGILGSLTFVGPLFGPDTLP 69
Query: 57 QFVPTVIDVVFGAWPEVI-AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ ++ V + + + + I I+ ++ + +I + + + S+ + + S
Sbjct: 70 EIQERLVRVANSVFSKSVVTEIIEPTIIDIMRDGRGEVVSIGFVISLWAGSSAISSFVDS 129
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ A+ +R R + G + A V+ + P +A V +
Sbjct: 130 VVEAHDQTPLRHPVRQRFFALGLYVAALAMAVVTLPMVALGPKRIAEVV-----PDSWNS 184
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ G +AL + ++ + G + + + ++ Y+
Sbjct: 185 LLRYGYFPLLGIALVALVTLLYRVSLPRPLPSHRLWIGALLAVTFFAIASLGLRFYLNWI 244
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ Y LA+ + L+F +MLG +LGAELNA++
Sbjct: 245 TGTGYTYGALATPIAFLLFAFMLGFAIVLGAELNAAIEE 283
>gi|320008979|gb|ADW03829.1| ribonuclease BN [Streptomyces flavogriseus ATCC 33331]
Length = 313
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 36/265 (13%), Positives = 98/265 (36%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ I+ + L++FP I GA + L + Q + T+ D +
Sbjct: 21 HAWRSYETLERVHWARLAAAITFLSFLALFPLIAVGAAIGAALLSPQQLDTIEDKLADQV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR--VVEMRSW 128
P + + D ++ A + ++ + + ++R L + V+ +
Sbjct: 81 PGISDQLGIDSLV----AHAGTVGVVAGALLLFTGIGWIGSMRDCLRAVWEKDDVDEGNP 136
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATM 186
+ ++ G ++ + V A+ + + + ++ + M
Sbjct: 137 VVRKIKDAGLLIGLGGAALATLAVSTVASTAIGWTVDRLGIPEDGVGGVLLQLAAVLVAM 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A F+ L+++ LP + ++ + + + + +L Y+ ++ S MY
Sbjct: 197 FADFLILLYLLTLLPGVEPPRRRLIVAGLVGAVGFELLKLLLGSYMRDVASKS-MYGAFG 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ ++ A A+
Sbjct: 256 VPIALLLWINFSAKLLLVCAAWTAT 280
>gi|58336949|ref|YP_193534.1| hypothetical protein LBA0624 [Lactobacillus acidophilus NCFM]
gi|227903506|ref|ZP_04021311.1| possible ribonuclease BN [Lactobacillus acidophilus ATCC 4796]
gi|58254266|gb|AAV42503.1| predicted membrane protein [Lactobacillus acidophilus NCFM]
gi|227868393|gb|EEJ75814.1| possible ribonuclease BN [Lactobacillus acidophilus ATCC 4796]
Length = 308
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/279 (18%), Positives = 114/279 (40%), Gaps = 8/279 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I + + + + I+ L S+FP I+ N+ + +
Sbjct: 11 KFVQFILTLRTTLSQGEIFDSSIIIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYL 68
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+P+ ++ I + +L + G + + A + SN V A+R+ NR Y V ++
Sbjct: 69 NIVFPDQVSSFIMPIVNSLLKTTSTGYMSFGIVLAIWSFSNLVNAIRLGENRLYGVHQIE 128
Query: 127 ------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ TR+I+ + L + S V V L +++ + +++
Sbjct: 129 LRLSIINFIWTRVITVVFTALMIIIFTFASIVLVFGQQVLNFLKPITNLPVEEISRVFSY 188
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R +L + + + +++ LP K K + PGV T I W+ + LF+ Y+ F
Sbjct: 189 RYPVVLLMMVLAVFYLNYVLPNIKLKKRVVWPGVFATVIGWLALSFLFSFYLHHFPITWE 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + +++L + F+ G +NA++I +
Sbjct: 249 NYGIVGTFIIFMLWLNIAAFLFLFGVAVNAAIIHNRVGE 287
>gi|269102248|ref|ZP_06154945.1| putative membrane protein [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268162146|gb|EEZ40642.1| putative membrane protein [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 347
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 89/279 (31%), Gaps = 11/279 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH--QFVPTVIDVVFG 68
A + F + G + I+ + LS+ P ++ AGF+ A + +ID +
Sbjct: 50 HFIRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFILASNADLLTDIIDKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + A Y + + LR ++ R + R
Sbjct: 110 GVTDPSLAQTLKNTVNTAVNQRTTVGLSGLAIALYSGISWMGNLREAVRAQTRDIWERKP 169
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+ F + L+ + A A + + L ++
Sbjct: 170 EDKDHILLQYGKDFIALTGLVAALIFTVALTSIAGSAQASIVNALGLNDVTWLRPVLTTI 229
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++++ LP K + +++ G + I + T + + S
Sbjct: 230 ALTISISANYLMFLWIYWMLPKKKLERKALILGTLMAAIGFEGIKFAMTFMLPKLAQ-SP 288
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A SI+ + F Y + A A+ +
Sbjct: 289 SGAAFGSIIGLMAFFYFFARLTLFCAAWIATAEPSKKKH 327
>gi|17549883|ref|NP_523223.1| putative ribonuclease RNase BN (RBN) transmembrane protein
[Ralstonia solanacearum GMI1000]
gi|17432139|emb|CAD18815.1| putative ribonuclease rnase bn (rbn) transmembrane protein
[Ralstonia solanacearum GMI1000]
Length = 324
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 98/285 (34%), Gaps = 7/285 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSIVKGAWLVLAGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRA 119
+ + G A + + I+A+ ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGAQGAAAVEAVLAATRRSGHGLFAAITAMVLLVVGATTVFSELKDSLDEL 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V + + ++ + + + ++ + I A V + F +
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAGLAVVERFWGAIWTGSVFAI 189
Query: 180 GRIYATMLALFIGLIFV----HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+M F + + LP + + G + T + + +G L Y+
Sbjct: 190 AANALSMAFSFAVVSLLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLGN- 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 249 SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|284052833|ref|ZP_06383043.1| putative ribonuclease BN [Arthrospira platensis str. Paraca]
Length = 422
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/254 (16%), Positives = 99/254 (38%), Gaps = 28/254 (11%)
Query: 55 AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ + +++ PE + K I + Q + LF+ S + + + S + +
Sbjct: 163 LQSTLLEMANLLGEVVPEQVQKLIGATMSQSGRSLSPRLFSFSFIISIWLFSGVISSAME 222
Query: 115 SLNRAYRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK------- 165
+LNR ++V + R ++ ++LI+ L + L++ + + +
Sbjct: 223 ALNRIHQVPQEKIRPFWKSKLIAIALTLGTLLLLIMALGAVFISDFLVEIIARKSCILET 282
Query: 166 -------------------FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
LL + T+ + F++ + P+ +
Sbjct: 283 VGNCPLDKIDMCLAQEPVQDCLLQSTLLDTWNRLQWPITLGIVSTNFAFIYRYGPSYRKP 342
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
++PG I I W + + LF Y+ Y+ +Y + + + L++L + + ++GA
Sbjct: 343 KTPLIPGSILAAIFWALISNLFRWYVYQSEYYNLIYGAIGTFIVLLLWLNISSLVVLMGA 402
Query: 267 ELNASMIIYYWRKK 280
+LNA++ R+K
Sbjct: 403 QLNATVGDEIRRRK 416
>gi|167566378|ref|ZP_02359294.1| putative ribonuclease [Burkholderia oklahomensis EO147]
Length = 304
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/255 (20%), Positives = 95/255 (37%), Gaps = 5/255 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
A + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 20 AFKRFSTDRCSAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGNE 79
Query: 74 IAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A + + ++G IS A +S +L +L+ + R+ +
Sbjct: 80 AAAGVQTIVENAHRSGSRGGIAALISFAMLAVGASATFASLNTALSVIWPATGTRASSVL 139
Query: 132 RLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L+ V + + + V + + A+ +V ++ ++I + + L
Sbjct: 140 GLVRVRLVSFGLVLGVAFLLIVSLVLDTAITFVGRWLWGNSPYVVIGNLLQFSIGIAVLA 199
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ FLP A+ I + G I + + + G LF Y+ T S + S
Sbjct: 200 FAFGTLMKFLPDARVSIRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFAV 258
Query: 251 CLVFLYMLGVFFILG 265
L++LY +LG
Sbjct: 259 LLMWLYFSAAVLLLG 273
>gi|313884907|ref|ZP_07818659.1| YihY family protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312619598|gb|EFR31035.1| YihY family protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 324
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/254 (15%), Positives = 100/254 (39%), Gaps = 3/254 (1%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
+ A+ +S + ++ P ++ AN+ L ++ + P + + +
Sbjct: 25 GSYAAELSFYIIWAIVPLMLALANVISVLPFSPT--DIVATIKDVLPSQVQGLLLPLLED 82
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
L+ + G F++ + + + +SN ++ N Y+ ++ I R+ S+ + + +
Sbjct: 83 YLSSTSSGAFSLGLIISLWPASNVFNTIQRVFNTIYKAEPRKNALIARMFSYVFTIAFVL 142
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
V + F + V+ F LL I+ N L + L+ ++ F+P
Sbjct: 143 VGVFLGFAVLYGETFYQAVKDIFGFDFALLEILINQSGLIGFALLALVLLIIYQFIPNVN 202
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+PG +F + + + + LF + ++ + + L++LY + +
Sbjct: 203 WTWRYSIPGTLFALLGFTLISQLFGLVVSMMGRSTSN-QTIGVFIILLIWLYFNAMVIAI 261
Query: 265 GAELNASMIIYYWR 278
GA +N + +
Sbjct: 262 GAFINVFYHDFKEK 275
>gi|167590251|ref|ZP_02382639.1| putative ribonuclease BN [Burkholderia ubonensis Bu]
Length = 270
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/257 (18%), Positives = 88/257 (34%), Gaps = 5/257 (1%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
MA+ I+ + S+ P +V +AG+ G V A + +
Sbjct: 1 MAASIAFYSAFSLAPMLVMVIAVAGWFYGDDAARGLVFQQAHQLIGNDAAASVQTIVQNA 60
Query: 86 LAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV-LLA 142
+G IS A A +S +L +L+ + E R + L+ +
Sbjct: 61 HHSGNRGGLATLISFGALALGASATFSSLSAALSVIWPATESRWSSVLGLVRVRLISFGL 120
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + + + + A+ +V + + I + + L + FLP
Sbjct: 121 VLGVAFLLIASLVLDTAITFVGTWLWGDSPYIAITDLLQFLVGIAVLAGAFAALMKFLPD 180
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
A+ G + I + G LF Y+ T S + S L++LY
Sbjct: 181 ARVAWRDAAIGGTVSAILFSGGKKLFALYLAHAGTASA-FGAAGSFAVLLMWLYFSAAVL 239
Query: 263 ILGAELNASMIIYYWRK 279
+LGAE A+ R+
Sbjct: 240 LLGAEFAAARGAVRERR 256
>gi|119898109|ref|YP_933322.1| exoribonuclease II [Azoarcus sp. BH72]
gi|119670522|emb|CAL94435.1| exoribonuclease II [Azoarcus sp. BH72]
Length = 306
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/265 (19%), Positives = 94/265 (35%), Gaps = 5/265 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFG 68
+ A+ ++ + G +M++ ++ A S+ P +V +A GA + +
Sbjct: 28 RFVGAALGDWLADGGPSMSAAVAFYAAFSLAPVLVVAIAVASLFVGAEAVQGRLFSGIQA 87
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALA-AAYFSSNGVEALRISLNRAYRVVEMRS 127
+ A + + G +LA ++ L SLN +R E
Sbjct: 88 VVGDEGAVVVQAMVASAWKAGGGGWMGGLSLAGTVIGATATFAELNRSLNIVWRAPENPR 147
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI--YAT 185
+ L V + V + LAY + +L L + G + +
Sbjct: 148 VIASLLRVRLVSFGMVVGTGFLVVVLLIADAGLAYGGRMLLGAMDLDLALVLGLLEQAVS 207
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L I + LP + L G I T + +G LF Y+ T + +
Sbjct: 208 FAFLCIAFSLLLKLLPDVHVPWGAALVGGIATAALFSLGKQLFARYLAYAGTANA-FGAA 266
Query: 246 ASIMTCLVFLYMLGVFFILGAELNA 270
S+ +++L+ F+LGAEL A
Sbjct: 267 GSLAVLMMWLFFSAAVFLLGAELAA 291
>gi|255535679|ref|YP_003096050.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
gi|255341875|gb|ACU07988.1| Ribonuclease BN [Flavobacteriaceae bacterium 3519-10]
Length = 338
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/274 (17%), Positives = 108/274 (39%), Gaps = 4/274 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID--V 65
++ + + + A+ IS S LS+FPFI+F +L +L + + I +
Sbjct: 35 LWKMFEIYGQGVFKMQIGRSAASISWSFFLSLFPFILFLLSLLPYLPHYDKLQFYIFEVL 94
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ +P I + ++ I + + + T++ + A F+ NG +L N +
Sbjct: 95 MLNVFPAHIQQEVSGYINSFIIPNMQNISTLTIVFAMVFAVNGTHSLINGFNLNTNLQ-- 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R ++FG + ++ F + L + + +
Sbjct: 153 RGAVKEYFVAFGITIAFIFLIIASLFGVYYSEVVLKLFTPEINISWLVRNMTKIIGFISF 212
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ I L + + LPG + T + ++V F Y+ F+TY+ +Y +
Sbjct: 213 PVFYLILLALFYWVGCLKITSFKQALPGAVLTTLLFIVLTYFFAIYVRNFATYNVLYGSI 272
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+I+ ++++ + + +LG ELN ++ K
Sbjct: 273 GTIILVMIWVNLNIILILLGNELNIAIKKVRVEK 306
>gi|255024064|ref|ZP_05296050.1| transport protein [Listeria monocytogenes FSL J1-208]
Length = 214
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/193 (22%), Positives = 88/193 (45%), Gaps = 2/193 (1%)
Query: 18 HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP 77
+ D A+ ++ L S+FP ++ A L +L + +V +++ P+ I
Sbjct: 24 RVGKNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIKEFAPDQIMDF 81
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
+ + + +L GL +I +A + +SNG+ A+ SLN+AY V R++ + RL+S
Sbjct: 82 LEENLNNLLTQKNGGLLSIGIIATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSXF 141
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L T+ + V ++ + L N R T++ +F+ F++
Sbjct: 142 FTLAMLATVGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLY 201
Query: 198 LFLPAAKSKIMSI 210
P +S ++S+
Sbjct: 202 WVAPNRRSTLISV 214
>gi|302524152|ref|ZP_07276494.1| predicted protein [Streptomyces sp. AA4]
gi|302433047|gb|EFL04863.1| predicted protein [Streptomyces sp. AA4]
Length = 337
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/282 (19%), Positives = 107/282 (37%), Gaps = 6/282 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
+R + + D + A + F E G A+ I+ ++LSVFP + + G + G + V
Sbjct: 15 LRRKYPWL-DHLIRANDSFNENYGNHYAAAITYFSVLSVFPIFMVAFAIVGMVLGHNAAV 73
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + + + +I G+ L AAY + LR +L
Sbjct: 74 IDQLTHGIDSSVPEGLRGLVKQITDAALKSGSGIGIFGLLLAAYSGVGWMANLRDALTAQ 133
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG---NLLLI 176
+ + +++R I LL +++SF A L + L +
Sbjct: 134 WGQEKKTEPFVSRTIKDLLSLLGLGLALVVSFAITAAGSGLGELLLKLVGLEGQGWAKFL 193
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ I +++A + ++V LP + S + G + + +VV + T Y+ + +
Sbjct: 194 LHVATIVLSLIANALVFLWVIARLPREHVALRSAVKGALIAAVGFVVLQQVATVYLASVT 253
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
S A ++ LVF ++ F +L A+ R
Sbjct: 254 K-SPSAAIFGPVIGLLVFANLVSRFLLLVTAWTATARENQRR 294
>gi|162149554|ref|YP_001604015.1| ribonuclease [Gluconacetobacter diazotrophicus PAl 5]
gi|209544792|ref|YP_002277021.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
gi|161788131|emb|CAP57735.1| putative ribonuclease [Gluconacetobacter diazotrophicus PAl 5]
gi|209532469|gb|ACI52406.1| ribonuclease BN [Gluconacetobacter diazotrophicus PAl 5]
Length = 302
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 93/295 (31%), Gaps = 28/295 (9%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVF 67
+ +I +I +F++++G + + I+ + S+ P + ++ G L GA V D +
Sbjct: 6 WAVIRQSIANFIDDEGLSRGAAIAFYTMFSIVPVLAIIVDVVGVLYGAEATRGAVFDQIR 65
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV--- 123
A + D ++ PA + ++ L+ +LN +R
Sbjct: 66 AVMGPDNAGALQDMLIASHRSPASLPARIATVAMLLVTATGVFGELQTALNVVWRHDTAD 125
Query: 124 ----------------------EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA 161
+ L + ++
Sbjct: 126 GIAARPAAAPPPDTPPPATPPPATPWMTALLYQRVLALGLIAALAGLLLVSLTVNTALAT 185
Query: 162 YVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ + ++ + + + LP + I G T + +
Sbjct: 186 LLGHIHWNFPGQVRLVQALNLSLSFGLVMTLFAATFHLLPDHELAWRDIWTGAAITALLF 245
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++G L YI + ++ Y +++ ++++Y F+LGAE ++
Sbjct: 246 MIGETLIGLYIGNLVSATS-YGAAGALIVVMLWIYYSAQIFLLGAEFTRAIAARR 299
>gi|158338113|ref|YP_001519289.1| ribonuclease BN [Acaryochloris marina MBIC11017]
gi|158308354|gb|ABW29971.1| ribonuclease BN [Acaryochloris marina MBIC11017]
Length = 334
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 93/277 (33%), Gaps = 5/277 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
F VF ++ + + +A+ ++ S+ P +V +A V+
Sbjct: 3 FDNVFWLLKVTGLEWQRDKASRLAAALAYYTAFSLAPVLVIVIAIASLAFNQSTVQGQVM 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG-VEALRISLNRAYRV 122
A I + + T+ +L + S G L+ +LN +++
Sbjct: 63 AQFKEWLGPDGAAIIRVMVRGTYLQGSGMRDTLGSLVLLFVGSTGLFTNLKDALNSIWKI 122
Query: 123 V--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R W F ++ +++ + A + + + +
Sbjct: 123 QPAPDRGWKGFVRDRFFAFVMVLGVGLVLILILGLSTWLTAVSNSASTYVSSWIHVGRIL 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ + + ++ +LP + + + G T + + +G L + Y+ ++ S+
Sbjct: 183 DSVFSLSIITFIVALIYKYLPDVEIQWSDVWIGSFLTSLLFSIGKFLISLYLSR-NSLSS 241
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y S+ L+++ F GAEL +
Sbjct: 242 TYGAAGSLAVVLLWVNYSAQIFFFGAELTKVYTNRFG 278
>gi|86138868|ref|ZP_01057440.1| ribonuclease BN, putative [Roseobacter sp. MED193]
gi|85824515|gb|EAQ44718.1| ribonuclease BN, putative [Roseobacter sp. MED193]
Length = 257
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 85/254 (33%), Positives = 139/254 (54%), Gaps = 4/254 (1%)
Query: 27 MASHISLSALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
M+SHI++S +L++FPF++F LAG + ++D+VFG+WPE ++ PI E+
Sbjct: 1 MSSHIAMSMMLALFPFVLFTVALAGTMASVFSQGIDLDHLVDLVFGSWPEPVSTPIVSEL 60
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
VLA + GL T+ A YF+SNGV A+RI++ +AY V+ R ++++R++ G+V+L
Sbjct: 61 NAVLATSSTGLITVGGFLALYFASNGVNAVRIAMVQAYHDVDRRPFWLSRILCIGFVILG 120
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
++ + V +PL L Y+ FFP + + +L F + HL LP
Sbjct: 121 GAGILFAALFEVILPLYLHYLADFFPEVELSGYLTSGLHGLVAVLLPFFAVFLCHLVLPG 180
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
++ +LPG + T W + F Y+ + + YS YAGLA M ++FLY+
Sbjct: 181 HIHRLSHLLPGTVLTVALWWGAGIGFAFYVGSIAQYSATYAGLAGAMAAMIFLYVNAAIL 240
Query: 263 ILGAELNASMIIYY 276
I GAE N ++I
Sbjct: 241 IFGAEFNNALIELR 254
>gi|254446822|ref|ZP_05060297.1| Ribonuclease BN-like family [Verrucomicrobiae bacterium DG1235]
gi|198256247|gb|EDY80556.1| Ribonuclease BN-like family [Verrucomicrobiae bacterium DG1235]
Length = 476
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 92/291 (31%), Gaps = 20/291 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVID 64
+ +I E +A A+ +S S+LL + P I ++GF +I+
Sbjct: 37 IARVIAITFSGLKENRIFARAAALSFSSLLGLGPLIALMVLVSGFALDQADPDLAQNMIE 96
Query: 65 VVFGAWPE------------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
V + A + + AL +
Sbjct: 97 RVVTYIAPQVNLSETDESEQEGGGLREMISHFIEASQSGTVGVGGALVLVLIVLQLFITI 156
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL-----ALAYVRKFF 167
+ N + V + R ++ + + L +V + V+ + +A
Sbjct: 157 EDAFNDIWGVSKGRKLITRVILYWTIITLGTVLVFAGVAFAVSELMKLNEQFVALTESIP 216
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
+ + G + L + L + F+P + + + G +F+ ++
Sbjct: 217 GSETVNSWLATYGGKLGSFLLITSVLALFYRFIPNTQVEWRAAYVGALFSVSCFIANNAF 276
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
Y + T+Y L + ++ L+ + +LG L+ ++ ++
Sbjct: 277 AFLYFERVAMQRTLYGSLGILPVLMIGLFTFWLCLLLGGRLSFAVQNARFK 327
>gi|326777113|ref|ZP_08236378.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
gi|326657446|gb|EGE42292.1| ribonuclease BN [Streptomyces cf. griseus XylebKG-1]
Length = 340
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 36/265 (13%), Positives = 97/265 (36%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + E +A+ I+ + L++FP + GA +A L + + V T+ D +
Sbjct: 32 HVWRSYERLDRVHWARLAAAITFISFLALFPLLAVGAAVAAALLSDEQVDTIKDKLADQV 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SW 128
P + + D ++ A + ++ + V +LR L + + E++ +
Sbjct: 92 PGISDQLGIDGLI----ANAGTVGLVAGALLLFTGIGWVGSLRECLRAVWELDEVQEANP 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ ++ + V A+ + N + + +
Sbjct: 148 VVAKVKDAVLLVGLGGAGLATLAVSTVGSTAVGWTADQIGIPENGVGGVLLRVAALAVAV 207
Query: 189 L--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F+ L+++ LP + ++ + + + + +L Y+ + S MY
Sbjct: 208 VADFLLLLYLLTLLPGVEPPRRRLMVAALLGAVGFELLKLLLGSYMREVAGKS-MYGAFG 266
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 267 VPIALLLWINFTAKLLLFCAAWTAT 291
>gi|257095643|ref|YP_003169284.1| ribonuclease BN [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257048167|gb|ACV37355.1| ribonuclease BN [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 280
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 98/274 (35%), Gaps = 7/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV 66
+ FVEE+ +++ ++ + LLS+ P + ++ + + + +
Sbjct: 8 WRRFVLRVARRFVEENFDQISASLAFTTLLSLVPLVAVILSIVALVPFFPSMLDQLAQFL 67
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + + + + + A + + ++A + + + N + V E R
Sbjct: 68 ARSLLPERSAGMIIDYVLQFSHQAVNVTAVGSIALVATALLLLLTIERVFNHVWSVTETR 127
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W+ L A + + + + V L + +
Sbjct: 128 PWWHR------LRLFAGLIALWPLVIGGVLLATSYAVTTSLGWLDEPPWLRRLLFKALGL 181
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + L ++ LP + + + +++ F Y+ F +Y+ +Y A
Sbjct: 182 MVASLFLGGLYHALPNTRVAPRDAACAGLVAALGFLLMQKAFELYLSNFPSYAAVYGAFA 241
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ L++LY+ ++GA + A++ + ++
Sbjct: 242 TLPLFLLWLYLSWAVVLMGALVAATLPEFRAERE 275
>gi|254393002|ref|ZP_05008166.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
gi|326444080|ref|ZP_08218814.1| putative integral membrane protein [Streptomyces clavuligerus ATCC
27064]
gi|197706653|gb|EDY52465.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
27064]
Length = 376
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 102/274 (37%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 3 WLLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLMLGLLGLLGYIDDWTNTTTVASIEQN 62
Query: 69 AWPE--------VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + V L +I A + S V ++ Y
Sbjct: 63 ILNAAGTVLSERGVNDVARPLLEDVTHGGRPDLISIGFAIALWSGSRAVNVFIDTITVMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F L+A V ++ + V P + + ++
Sbjct: 123 GLDGRRGIVATRLLAFLLYLIALVIGAVVLPLAVVGP------DRVVEWVPWGTTLVTVL 176
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S + +PG + WV+G+ L Y+V+ T
Sbjct: 177 YWPVVILLSVAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLVSTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPIAVLLWIGISAFAILVGAAVNAAIDR 270
>gi|302553698|ref|ZP_07306040.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
gi|302471316|gb|EFL34409.1| ribonuclease BN family membrane protein [Streptomyces
viridochromogenes DSM 40736]
Length = 322
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 94/269 (34%), Gaps = 8/269 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + E +A+ ++ ++ +++FP + A +A + + + D
Sbjct: 32 RLMITHAWRSYERLDRVKWTRLAAAMTFTSFVALFPLLTVSAAIAAATLSTEQQEKLQDK 91
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-E 124
+ P + + ++ A + I+ + + ++R L + + E
Sbjct: 92 LADQVPGISDQLDIGTLVD----NAGTVGLIAGALLLFTGISWAGSMRECLRAVWELPDE 147
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRI 182
+ + + G ++ L++ + ++ + ++
Sbjct: 148 EENPALRYVKDAGVLVGLGGALLVTIAASAVASAMIGWIIRQLGVDEGGWGGVLLRIAAF 207
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+LA F+ L++V LP + + + + + + +L + Y+ + S MY
Sbjct: 208 LIAVLANFLLLLYVLTLLPGVEPTRHRLFVAALTGAVGFELLKLLLSGYLQGVAGKS-MY 266
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 267 GAFGVPVALLLWINFTSKLVLFCAAWTAT 295
>gi|78213836|ref|YP_382615.1| serum resistance locus BrkB-like [Synechococcus sp. CC9605]
gi|78198295|gb|ABB36060.1| serum resistance locus BrkB-like [Synechococcus sp. CC9605]
Length = 310
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 98/287 (34%), Gaps = 20/287 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAW 70
I+ A + + + +++ + L S FP ++ ++A G V V+ V
Sbjct: 14 IWQACQRWNNAECVDLSAAFAYFVLQSFFPLLLIALSVAARVFGKTDSVDNVLASVTQVL 73
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY---------- 120
P + + + ++ + +SN L+ +R +
Sbjct: 74 PPSVTSLVDSTLRGLVDQGFGAGVLGVVVLLL-TASNAYLTLQRGADRLWSEILPEPSAG 132
Query: 121 --RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
++ + TR+ +F V SV ++ V L + + L +
Sbjct: 133 LSWWQQVGQFCRTRVEAFLTVFAISVLIIFQQLVLSVGQLPEDILGVLNGFIPGLTGFVR 192
Query: 179 ------NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
GRI L L + + + LP+ + + ++PG + + + I
Sbjct: 193 SSPILPLGRILVPALILSLMAWLLQVVLPSRRVPAIPLIPGALLIGFGLAFLNKILSLSI 252
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V+ Y + ++ ++++++GV G L+ + K
Sbjct: 253 VSLGNRYQAYGVIGGVLVLTLWVWLVGVILYFGQCLSVELASVRLAK 299
>gi|85709785|ref|ZP_01040850.1| hypothetical protein NAP1_12908 [Erythrobacter sp. NAP1]
gi|85688495|gb|EAQ28499.1| hypothetical protein NAP1_12908 [Erythrobacter sp. NAP1]
Length = 277
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 91/266 (34%), Gaps = 14/266 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
I+ + +A+ ++ A LS P + G L V +
Sbjct: 17 LHILKAGWTKAQANNAGLLAAGVTYYAFLSFMPLLAAIVLTYGLLADPALVAENSRELAR 76
Query: 69 AWPEVIAKPITDEILQVLAVP---AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P A+ I D++ + + ++ + + + A+ + N A+ E
Sbjct: 77 TLPPSAAELIGDQLKDITDNRTDTSGLGLILAIALSIFAARVAAGAVITAFNVAFAAAES 136
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + L++ + A + +++ + A++ + + A
Sbjct: 137 RGFIKANLLALCITVGAIIAFGLVAALTTLATNAISNSGEAA-----------ASLVVAA 185
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L L+ + + G + + W++ + F Y F Y+ Y L
Sbjct: 186 IAGLGGALLAYRIVPNVDDVTLREAFRGALPFAVGWMIASAGFAWYAANFGNYNATYGSL 245
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
+I+ L +LY+ +LGA + A+
Sbjct: 246 GAIVVFLTWLYLSAYLLLLGAHIAAA 271
>gi|319794326|ref|YP_004155966.1| ribonuclease bn [Variovorax paradoxus EPS]
gi|315596789|gb|ADU37855.1| ribonuclease BN [Variovorax paradoxus EPS]
Length = 307
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 102/284 (35%), Gaps = 12/284 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
+FD+ A + + +M + ++ + S+ P ++ +AG G +
Sbjct: 5 IRALFDLCKRAFASWSNDYAPSMGAALAYYTVFSIAPLLLIVIAVAGLVFGQEAARGEIF 64
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G A + + V + I ++ L+ +L+R +R
Sbjct: 65 AQLSGLMGAQGAAAVQGMLQAVNKPTEGIVATVIGIGLLVVGATTVFGELQDALDRIWRA 124
Query: 123 VEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ RL+SF ++ L++ A+ + F A +L +
Sbjct: 125 PARTKSSGIFNLLRVRLLSFSMIMGIGFLLMVSLVASAALAALGKWWSPMFGAWESLAQV 184
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + ++ +P AK + + G T + + VG L YI S
Sbjct: 185 VN---FVFSFAMVTVIFAMIYKIMPRAKVQWRDVWVGAAVTALLFTVGKHLIGLYIGK-S 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ ++ Y S++ LV++Y F+LGAE Y K
Sbjct: 241 SVASGYGAAGSLVVVLVWVYYSAQIFLLGAEFTWVYARTYGSMK 284
>gi|212711567|ref|ZP_03319695.1| hypothetical protein PROVALCAL_02641 [Providencia alcalifaciens DSM
30120]
gi|212685669|gb|EEB45197.1| hypothetical protein PROVALCAL_02641 [Providencia alcalifaciens DSM
30120]
Length = 330
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 97/274 (35%), Gaps = 11/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + F + G + I+ + LS+ P ++F AGF+ + + +I
Sbjct: 45 FIAHLIRTAQRFTDRMGNQFGAAITYFSFLSLIPVLMFSFAAAGFVLASNPELLEKLIRG 104
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + ++ + + A Y N V LR+++ R V
Sbjct: 105 ISANITDPTLANTLEQTIDTAIRQRTTVGLTGLALAVYSGVNWVNNLRLAILAQSRTVWE 164
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R + + F ++ + L++ + A A + + L +
Sbjct: 165 RNEAEQENIIFRYVRDFFALIGLLIALIVTITLTSVAGSAQATIVSTLGLDSIEWLKPVW 224
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A F+ +++ LP + + S+L G + I + + + T + T ++
Sbjct: 225 TLIGLAISITANFLLFLWIFWILPRMQHRRRSLLKGTLLAAIGFEIIKSIMTWILPTLAS 284
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A S++ + F Y + A A+
Sbjct: 285 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIAT 317
>gi|282853962|ref|ZP_06263299.1| putative ribonuclease [Propionibacterium acnes J139]
gi|282583415|gb|EFB88795.1| putative ribonuclease [Propionibacterium acnes J139]
Length = 418
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 92/278 (33%), Gaps = 13/278 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ A F G A+ I+ +L++ P I F + G + + + V
Sbjct: 11 RHSIAHLLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFAVLGLVLSRLSPYLLNQV 70
Query: 66 VFGAWPEVIAKPITDEILQVLAV-----PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V +I ++ + F +S L A + V +R + +
Sbjct: 71 VDSVVGLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEW 130
Query: 121 -----RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNL 173
V + R + +L L + ++ + ++ +
Sbjct: 131 APDFDMVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGY 190
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
L++ + AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 191 GLLLTLAGLVATTIAGWLLFIFLYTVMPRVKTSWSPILKGSLAAGFALALVQVGAG-YLV 249
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 250 RAFNSNKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 287
>gi|120402568|ref|YP_952397.1| putative ribonuclease [Mycobacterium vanbaalenii PYR-1]
gi|119955386|gb|ABM12391.1| putative ribonuclease [Mycobacterium vanbaalenii PYR-1]
Length = 347
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 105/278 (37%), Gaps = 10/278 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
MR FD + A E + + G A+ I+ + ++FP ++ G ++ GF+ +
Sbjct: 20 MRARMPW-FDHVMRAQERYKDAKGDFYAAGITYFTIFALFPLLMLGFSVGGFVLASQPEL 78
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ TV++ + A + + + + + + + I AA+ + LR +L++
Sbjct: 79 LATVVERIRSAVSGELGRQLIELMDSAID-SRGTVGVIGLATAAWAGLGWMANLREALSQ 137
Query: 119 AYRVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ + E + T+L +L A +V+ + ++ + + +
Sbjct: 138 MWGLYREESPGFVRTKLSDLLALLSAFAAIVVTLALTALGNTSVMAGVLARLGIEDAPGL 197
Query: 177 ---IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ ++L + ++ LP S + + +++ + + Y+
Sbjct: 198 SLMLRLASFAVSVLVSWSLFTWMIARLPRESVSFRSSVRAGMIAAVAFEIFKFFGSVYLR 257
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ T A ++ +VF Y+ + A A+
Sbjct: 258 SVVT-GPAGATFGPVLGLMVFAYITSRLILFSAAWAAT 294
>gi|282599837|ref|ZP_05972094.2| putative ribonuclease [Providencia rustigianii DSM 4541]
gi|282567355|gb|EFB72890.1| putative ribonuclease [Providencia rustigianii DSM 4541]
Length = 327
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/274 (13%), Positives = 96/274 (35%), Gaps = 11/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + F + G + I+ + LS+ P ++F AGF+ + + ++
Sbjct: 42 FIAHLIRTAQRFTDRMGNQFGAAITYFSFLSLIPVLMFSFAAAGFVLASNPELLEKLVRG 101
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL------NRA 119
+ + ++ + + A Y N V LR+++
Sbjct: 102 ISANITDPTLANTLEQTIDTAIRQRTTVGLTGLALAVYSGVNWVNNLRLAILAQSRPVWE 161
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
+ E + + F ++ + L++ + A A + + L +
Sbjct: 162 HNQAEQENIIFRYVRDFFALIGLLIALIVTITLTSVAGSAQATIVSTLGLDSIEWLRPVW 221
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A F+ +++ LP + + S+L G + I + + + T + + ++
Sbjct: 222 TLIGLTISIAANFLLFLWIFWILPRMQHRRRSLLKGTLLAAIGFEIIKSVMTWILPSLAS 281
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A S++ + F Y + A A+
Sbjct: 282 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIAT 314
>gi|293365731|ref|ZP_06612440.1| ribonuclease BN [Streptococcus oralis ATCC 35037]
gi|306829784|ref|ZP_07462973.1| possible ribonuclease BN [Streptococcus mitis ATCC 6249]
gi|307703672|ref|ZP_07640614.1| ribonuclease BN-like family protein [Streptococcus oralis ATCC
35037]
gi|331266081|ref|YP_004325711.1| ribonuclease BN, putative [Streptococcus oralis Uo5]
gi|291316099|gb|EFE56543.1| ribonuclease BN [Streptococcus oralis ATCC 35037]
gi|304428135|gb|EFM31226.1| possible ribonuclease BN [Streptococcus mitis ATCC 6249]
gi|307623079|gb|EFO02074.1| ribonuclease BN-like family protein [Streptococcus oralis ATCC
35037]
gi|326682753|emb|CBZ00370.1| ribonuclease BN, putative [Streptococcus oralis Uo5]
Length = 286
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 127/284 (44%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELMDRPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P+ + + + +VL P+ GL + + L+A + S ++ L+ + N+
Sbjct: 59 VSNFLLTIKEFLPDTVYDVVAKIVREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +L+S + + F+ + + L ++ ++ + L +
Sbjct: 119 AYGVTKSRGIISHQLMSLLVSFGLQILFALALFLSMFGRMLLNLLKTYWQSDSPLFSYLQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +F L+ ++ FLP K +I +LPG +F ++ + +F+ Y+ ++
Sbjct: 179 DFTGPLVYALIFAILVMIYYFLPKVKAPRIRYVLPGSVFVLLTLIFLLNIFSVYVNSYVN 238
Query: 238 YSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +SI+ + + ++ I+GA +NAS+ K
Sbjct: 239 HLVDVRFFSSIIVVVMMFWFILIAKILIIGAVINASVQSLKDPK 282
>gi|315613448|ref|ZP_07888356.1| possible ribonuclease BN [Streptococcus sanguinis ATCC 49296]
gi|315314444|gb|EFU62488.1| possible ribonuclease BN [Streptococcus sanguinis ATCC 49296]
Length = 286
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 127/284 (44%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELMDRPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P+ + + + +VL P+ GL + + L+A + S ++ L+ + N+
Sbjct: 59 VSNFLLTIKEFLPDTVYDVVAKIVREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +L+S + + F+ + + L ++ ++ + L +
Sbjct: 119 AYGVTKSRGIISHQLMSLLVSFGLQILFALALFLSMFGRMLLNLLKTYWQSDSPLFSYLQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +F L+ ++ FLP K +I +LPG +F ++ + +F+ Y+ ++
Sbjct: 179 DFTGPLVYALIFAILVMIYYFLPKVKAPRIRYVLPGSVFVLLTLIFLLNIFSVYVNSYVN 238
Query: 238 YSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +SI+ + + ++ I+GA +NAS+ K
Sbjct: 239 HLVDVRFFSSIIVVVMMFWFILIAKILIIGAVINASVQSLKDPK 282
>gi|182683583|ref|YP_001835330.1| ribonuclease BN, putative [Streptococcus pneumoniae CGSP14]
gi|182628917|gb|ACB89865.1| ribonuclease BN, putative [Streptococcus pneumoniae CGSP14]
Length = 291
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 118/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 6 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 63
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 64 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 123
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 124 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 183
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 184 GLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 243
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 244 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 286
>gi|313764398|gb|EFS35762.1| putative ribonuclease [Propionibacterium acnes HL013PA1]
gi|314918329|gb|EFS82160.1| putative ribonuclease [Propionibacterium acnes HL050PA1]
gi|314920139|gb|EFS83970.1| putative ribonuclease [Propionibacterium acnes HL050PA3]
gi|314931661|gb|EFS95492.1| putative ribonuclease [Propionibacterium acnes HL067PA1]
gi|314955717|gb|EFT00119.1| putative ribonuclease [Propionibacterium acnes HL027PA1]
gi|314958116|gb|EFT02219.1| putative ribonuclease [Propionibacterium acnes HL002PA1]
gi|315101406|gb|EFT73382.1| putative ribonuclease [Propionibacterium acnes HL046PA1]
gi|327450725|gb|EGE97379.1| putative ribonuclease [Propionibacterium acnes HL087PA3]
gi|327453934|gb|EGF00589.1| putative ribonuclease [Propionibacterium acnes HL083PA2]
gi|328754144|gb|EGF67760.1| putative ribonuclease [Propionibacterium acnes HL087PA1]
Length = 436
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 95/273 (34%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSIPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ + K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMTRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|291008723|ref|ZP_06566696.1| ribonuclease BN-like family integral membrane protein
[Saccharopolyspora erythraea NRRL 2338]
Length = 313
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 98/278 (35%), Gaps = 14/278 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + +A + A+LS+ P ++ G+LG TV V
Sbjct: 18 RLAIGVVRTSARHRITGLAGEAAFFAVLSLPPLLLGLVGTIGYLGDVIGRDTVARVHGAI 77
Query: 70 W--------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
P+ +A+ + + QVL G+ + A + S ++ +++ Y
Sbjct: 78 LVASAAVLSPQGVAEIVEPTLDQVLTTGQAGISVVGFAVAVWSGSRALDVYIDTISVLYG 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R RL+S + + + + + V P L L + ++
Sbjct: 138 LSGYRGLVRQRLMSVLLYTVGLLVGIALLPLMVVGPNVL------MHLLPGMDALVHGVY 191
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L ++ + LPG + W+ G+ Y+ S
Sbjct: 192 WPTVLVLSAAFLSTLYYMSVPVHTPWRENLPGAAAALLVWIAGSAGLRAYLAVTIQSSPF 251
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L++ + L++LY+ + ++GA LNA + +
Sbjct: 252 HGALSAPIAVLLWLYVTALAILIGAALNAELDRLNPDR 289
>gi|257068125|ref|YP_003154380.1| hypothetical protein Bfae_09370 [Brachybacterium faecium DSM 4810]
gi|256558943|gb|ACU84790.1| predicted membrane protein [Brachybacterium faecium DSM 4810]
Length = 378
Score = 99.7 bits (247), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/273 (16%), Positives = 106/273 (38%), Gaps = 3/273 (1%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVV 66
+ ++ ++ W +A ++ LLS+FP V ++ +G + + + ++
Sbjct: 11 ILHVLNRVRMRLLDIQVWDVAGTMTFYLLLSLFPGAVAAVSMMSLIGVETETLTALSGMI 70
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNRAYRVVEM 125
+P + +P I V + L + A + +SNGV A +L+R + E
Sbjct: 71 TEIFPTLDPRPYLTAIQAVSSTSGGVLGLLLGTAGSLLSASNGVAAFHRALHRVFDTREG 130
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + R I FG +L +++ + + A + +F +
Sbjct: 131 RPFLWFRTIVFGETVLIVAVVLLAIGMIIVGGEASQRIGEFVGIPRIAFAAWNLVKWPIL 190
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSIL-PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ L I + + P + ++ G + + A++ +V + ++ +
Sbjct: 191 LVILIIAVSLAYYLFPNVRLPRYRVMTLGSTLSVLVLFGTALVAGQLLVYATRFAEILTA 250
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L ++ L+ +++ + I GA L+A +
Sbjct: 251 LNGLIAILILMWLANIVVIFGAALDAEFLRARQ 283
>gi|125623441|ref|YP_001031924.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris MG1363]
gi|124492249|emb|CAL97179.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris MG1363]
gi|300070189|gb|ADJ59589.1| putative tRNA-processing ribonuclease BN [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 301
Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 114/282 (40%), Gaps = 5/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + ++ + F + + ++ LL++FP + N+ FL +
Sbjct: 5 MKKVLQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHINTTA- 63
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + K I I +L GL ++S LA + S + AL++S+N+AY
Sbjct: 64 -LLSFLSDQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + ++R+I + L + L L V + F +L + N
Sbjct: 123 EVFNHRDFIVSRVIGLAAGFAILLFLYFSIVLSTFEQLILEQVHRIFAFDDHLYRTLHNM 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A +A F+ L+ ++ LP K + + +PG IF+ V Y+
Sbjct: 183 TLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRL 242
Query: 240 TMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ +++ + I+GA LNA K
Sbjct: 243 DDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGK 284
>gi|325849487|ref|ZP_08170768.1| YihY family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480107|gb|EGC83182.1| YihY family protein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 291
Score = 99.7 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 112/287 (39%), Gaps = 12/287 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + I + IE + D +AS +S L + P ++ NL +
Sbjct: 1 MKIKSSNIKKFILNLIERIRDHDLMTLASSLSYYFLSAAIPMLLVLLNLVT--KYMKGNE 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRA 119
V+ P+ I I + +L + + TI+ + A + +S GV + +++N A
Sbjct: 59 DVVIEFIKLLPDSIRGVILLIVKSILDSGSASTISTITLIFALWSASKGVSKIILAINVA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF------PALGNL 173
Y + + S ++ F Y + L+ + + + L + +L
Sbjct: 119 YGLEDDHSMIKNKIFGFLYTFILIFILIFIFLLKIYSNGILRIIEDVLKIVNYSFSLDEF 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPA---AKSKIMSILPGVIFTWISWVVGAVLFTH 230
+I + L +GL ++ P K K G I T + + + ++
Sbjct: 179 TWLINLISGIIPPIILILGLTLLYKAAPYNNSIKIKFKDAFVGSISTSLMIFITSFGYSF 238
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ S S +Y LA I+ LV++ + + ILGAE+ A+ +
Sbjct: 239 FLNNMSNMSVIYGALAGIIALLVWMLLFSLTIILGAEIIAAYMKTKN 285
>gi|314915389|gb|EFS79220.1| putative ribonuclease [Propionibacterium acnes HL005PA4]
Length = 436
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 95/273 (34%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSIPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ + K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMTRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|116073876|ref|ZP_01471138.1| hypothetical protein RS9916_35537 [Synechococcus sp. RS9916]
gi|116069181|gb|EAU74933.1| hypothetical protein RS9916_35537 [Synechococcus sp. RS9916]
Length = 334
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/298 (13%), Positives = 110/298 (36%), Gaps = 21/298 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FV 59
R V ++ A + D +++ + L S+FP ++ ++A + Q
Sbjct: 18 RSAVKRVVRSLWQAYLRWCRYDCVDLSAAFAYYTLQSIFPLLLIVLSIASWFLGRQVGLT 77
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+++ +P + + + Q++ G + A + N L+ +R
Sbjct: 78 DQIVEYSANIFPPSVVALVRTTLDQLV-RQGVGAGVLGAGVLLVTAGNVYLTLQRGADRI 136
Query: 120 YRVVEMRS----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV------------ 163
+ V R+ + ++ F V L + +V++ + + + A +
Sbjct: 137 WHGVLPRARVDLPWQQQVWQFVKVRLEAFVVVLLIGLLIVVDQISANLRMVPAAALADFV 196
Query: 164 --RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ + + ++ GR L + + + LP+ + + ++PG +
Sbjct: 197 LSVPWLEGVLRYIPVLSFGRFLIPCLGFAVMALLLQFLLPSRRVPLKPLIPGAALIGVLL 256
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
V + + I++ + Y + S++ ++++M+GV G + + Y R+
Sbjct: 257 TVLNLAVSRSILSLGSRFQAYGVIGSVLVLTLWVWMVGVVLYYGQCWSVVIARGYLRR 314
>gi|324111849|gb|EGC05829.1| ribonuclease BN family protein [Escherichia fergusonii B253]
Length = 342
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 39/281 (13%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPMLLQDIFNKILL 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NISDPALAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAIRAQSRDVWERTP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNG 180
+++ L F ++ + L++ + A + + L
Sbjct: 178 QDQEKFWLKYLRDFISLIGLLIALIVTLSITSIAGSAQQLIINTLHLNSIEWLKPTWRLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRRRALIRGTFIAAIGFEVIKIVMTYTLPSLMK-SP 296
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 297 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAQYKDDPRMP 337
>gi|313815935|gb|EFS53649.1| putative ribonuclease [Propionibacterium acnes HL059PA1]
gi|315098593|gb|EFT70569.1| putative ribonuclease [Propionibacterium acnes HL059PA2]
gi|328754607|gb|EGF68223.1| putative ribonuclease [Propionibacterium acnes HL025PA2]
Length = 436
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 95/273 (34%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P + F + G + + + V+D V
Sbjct: 34 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 93
Query: 68 GAWPEVIA-KPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
G E + I I + + F +S L A + V +R + +
Sbjct: 94 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 153
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 154 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 213
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ + K+ IL G + + + V Y+V
Sbjct: 214 LAGLVATTIAGWLLFIFLYTVMTRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 272
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 273 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 305
>gi|71908681|ref|YP_286268.1| ribonuclease BN [Dechloromonas aromatica RCB]
gi|71848302|gb|AAZ47798.1| tRNA-processing RNAse BN [Dechloromonas aromatica RCB]
Length = 275
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 92/261 (35%), Gaps = 8/261 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPEV 73
F E+ ++ ++ + L+++ P + ++A + V + +V A V
Sbjct: 18 VFHRFYGENMMQTSAALAFTTLMALVPLVTVVLSVAHAVPYLDLVVARLDLMVREALLPV 77
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + + A+ L + + + + + + N +RV RL
Sbjct: 78 GAAGAIVGNIGKFSQKAQNLTLVGLGGLSVTAFLLMNTIERAFNHLWRVSPRPILARLRL 137
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+F + V + + + + + L +
Sbjct: 138 YAFVMAVWPFVLGAVAGVMSF-------AITSSLGLFDEPMWFRRIALKVLATVLLGLFF 190
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
F++ +P A+ + L G +F +++ +F ++V+ + ++Y A+ LV
Sbjct: 191 SFLYYAVPNAEVSRRAALVGGVFAALAFAAMQKVFELFLVSSAMLKSIYGAFAAFPVFLV 250
Query: 254 FLYMLGVFFILGAELNASMII 274
+L++ + G L AS+
Sbjct: 251 WLHLSWAVVLFGGLLAASVNR 271
>gi|313202033|ref|YP_004040691.1| cyclic nucleotide-binding protein [Methylovorus sp. MP688]
gi|312441349|gb|ADQ85455.1| cyclic nucleotide-binding protein [Methylovorus sp. MP688]
Length = 426
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 97/273 (35%), Gaps = 7/273 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + F I + + F +G+++++ +S A+ ++ P + + L
Sbjct: 26 RRRYRTPFFIFRETLSAFQLHNGFSISASLSFYAMFALIPMALLIFFMLSHLVVSSNYAI 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V + + + ++ A + + ALR + +
Sbjct: 86 VKLAILTSNLVPKFSHRIMIEVYNVSKHQAVWGAFGMFALFWIVTPLAGALRSAFHTIAS 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+VE S+ + VL + I + + + + + +
Sbjct: 146 MVEEPSFIKRKFKDVIGVLGILLLFFIFTLMGLGLEKVIDFF-------NPSATHTKLID 198
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++++ + + + A+ + +IL G T I W+ F ++ +Y T+
Sbjct: 199 NVSSIVICTVLIAIFYRIFFPARISLKNILIGSTITGIMWIAMRPAFGLFLSLNQSYDTV 258
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ G+ ++ + +LY F+LG EL +++
Sbjct: 259 FGGMKNMFISIGWLYYTFAVFLLGTELISTLHK 291
>gi|307706878|ref|ZP_07643680.1| ribonuclease BN-like family protein [Streptococcus mitis SK321]
gi|307617751|gb|EFN96916.1| ribonuclease BN-like family protein [Streptococcus mitis SK321]
Length = 286
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 124/283 (43%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELTDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + VV P+ + + I +VL P+ GL + + L+A + S + L+ + N+
Sbjct: 59 VSNFLKVVNEFLPDTMYDVVAKIITEVLTQPSTGLLSFAVLSALWTFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +L+S + + F+ V + L ++ ++ + L +
Sbjct: 119 AYGVAKNRGMISHQLMSLFVSFGLQILFALALFLSVFGRMLLNLIKSYWKSDSPLFDYLQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +F L+ ++ FLP K + S+LPG F ++ V+ +F+ Y+ +
Sbjct: 179 DLTGPLVYALIFAILVMLYYFLPNVKVRRIRSVLPGSAFVMLTLVLLLNIFSVYVNNYVN 238
Query: 238 Y--STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + ++ + + ++ I+GA +NAS+
Sbjct: 239 HLVDVRFFSSVVVVVMMFWFILIAKILIVGAVINASVQSLKDP 281
>gi|118472662|ref|YP_886035.1| ribonuclease [Mycobacterium smegmatis str. MC2 155]
gi|118173949|gb|ABK74845.1| ribonuclease, putative [Mycobacterium smegmatis str. MC2 155]
Length = 345
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 95/266 (35%), Gaps = 9/266 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
FD + A E + + G A+ I+ + ++FP ++ G + GF+ + + +
Sbjct: 21 WPWFDHVMRAQERYNDSKGDFYAAGITYFTIFALFPLLMVGFAVGGFVLASQPELMGQLE 80
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + A + + + + + I AA+ + LR +L++ + +
Sbjct: 81 DKIRQAVSGDLGAQLVQLMDSAID-SRTSVGVIGLATAAWAGLGWMANLREALSQMWGLF 139
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----PALGNLLLIIW 178
R + L S + I+ + + + + P L +++W
Sbjct: 140 REEKPGFVRTKLSDLLALLSAFVAIILTIGLTALGSSTAIENVLNRIGMPDSVGLSILLW 199
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ ++ ++ ++ LP S L + + + + L + Y+ + T
Sbjct: 200 VLSVLMSLFVSWLLFTWMIARLPRETVTFRSSLRAGLLAAVGFEIFKQLASIYLKSVIT- 258
Query: 239 STMYAGLASIMTCLVFLYMLGVFFIL 264
A ++ +VF Y+ +
Sbjct: 259 GPAGATFGPVLGLMVFAYITARLVLF 284
>gi|300933848|ref|ZP_07149104.1| hypothetical protein CresD4_07235 [Corynebacterium resistens DSM
45100]
Length = 378
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 44/285 (15%), Positives = 93/285 (32%), Gaps = 18/285 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ---FVPTVIDVV 66
I+ + + +S LL+ P ++ + + + +
Sbjct: 54 HILKRLYIEYFFRGLMDRGAILSFFTLLTTVPTMMAFYAITTLILDKNRTRVTELTDEFI 113
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVE 124
P A + Q++ K + IS + A + SS V A S N Y E
Sbjct: 114 TENIPGRFADEARQIVEQIIGSTDKSMLTLIISVIFALFSSSAYVRAFSRSANALYGRQE 173
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL-----------AYVRKFFPALGNL 173
RS T L +G + LV+++ F L + L
Sbjct: 174 GRSLARTWLTMWGLTIALVFGLVLIAVAFFLRGDLLQPVLNAVAEPLNWEGGADFVLNKF 233
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYI 232
L + R + + ++ F P + ++ + G +F ++ + + Y+
Sbjct: 234 LPVWGYLRWPIVFGLSIMLIATLYHFAPNVRYGRMRWLTTGSVFALVTMSLVGLGVRIYL 293
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F + Y L ++ + L + ++G +L+A + +
Sbjct: 294 NRFLEFG-TYGALGGLIALFMGLVIANTLLLMGLKLDAEVTRFRE 337
>gi|300694721|ref|YP_003750694.1| ribonuclease bn [Ralstonia solanacearum PSI07]
gi|299076758|emb|CBJ36097.1| putative ribonuclease BN [Ralstonia solanacearum PSI07]
Length = 323
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 99/285 (34%), Gaps = 7/285 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSILKGAWLVLAGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRA 119
+ + G A + + ++A+ ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGTQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVVGATTVFSELKDSLDEL 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V + + ++ + + + ++ + I A V + F + +
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAALAVVERFWGAIWMGSVFAV 189
Query: 180 GRIYATMLALFIGLIFV----HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+M F + + LP + + G + T + + +G L Y+
Sbjct: 190 AADVLSMAFSFAVVALLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLGN- 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 249 SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|269958836|ref|YP_003328624.1| putative ribonuclease [Anaplasma centrale str. Israel]
gi|269848666|gb|ACZ49310.1| putative ribonuclease [Anaplasma centrale str. Israel]
Length = 286
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 62/274 (22%), Positives = 125/274 (45%), Gaps = 12/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-----FLGAHQFVPTV 62
F AI F DG + ++S LLS FPF+VF + F+ +
Sbjct: 20 FFKCAGLAIADFRRHDGLVYSGYLSFIFLLSTFPFLVFFTAMTSTALNVLDKHEDFLQGL 79
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV
Sbjct: 80 VTSLLSELPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRV 139
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R++S L + ++ V +P+ L + + LG +
Sbjct: 140 SAPPPYILGRMLSILQFLAIVLVMMCSVLFTVLVPIILDILDPKWGYLGY-------IKY 192
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L + + F++ +P + ++ +LPG + + W + + F+ Y+ F TMY
Sbjct: 193 IVSEVILCLSVAFMYYMVPNTRQRMGVVLPGAVVVTVLWSLSSFTFSWYLSNFRVLHTMY 252
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
L+ I+ ++F Y++ +FFI GAEL+ + +
Sbjct: 253 GNLSGIVASMLFFYIISIFFIYGAELSYRLSKQF 286
>gi|134098374|ref|YP_001104035.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338]
gi|291006924|ref|ZP_06564897.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338]
gi|133910997|emb|CAM01110.1| ribonuclease BN [Saccharopolyspora erythraea NRRL 2338]
Length = 404
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 107/281 (38%), Gaps = 9/281 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQF 58
R +++ + ++ ++ ++ + LS+ P ++ GF+
Sbjct: 17 RPVKRGPLRLVWRTVTKAWWDNIFSESAAAAFWQTLSMPPLLLGLLGSIGFIADWFGPAV 76
Query: 59 VPTVIDVVFGAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
+ V + G V+ + I + +L + ++ L + + S+ + +L
Sbjct: 77 IDAVHANILGFSRTVFSGNVVDQIIAPTVGDILTKGRTEIVSVGFLLSLWAGSSALASLV 136
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
S+ AY +R R + L++ V VI V P L V ++
Sbjct: 137 DSITLAYNQYMVRHSVWQRTFALLLYLVSLVLAVIGLPVIALGPDWLVRVVPQ-EFQDDV 195
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+I AT + L + L ++ K LPG + + ++ ++ YI
Sbjct: 196 AWLIQVFYYPATGVLLVLALATLYKVSLPRKLPWHRGLPGALLAMLVFLCSSIGMRLYIA 255
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++ Y LA+ + L+F + +G+ I+GA+ N ++
Sbjct: 256 WVTSTGYTYGALATPIAFLLFAFFIGMAIIIGAQFNNAIEE 296
>gi|186470500|ref|YP_001861818.1| ribonuclease BN [Burkholderia phymatum STM815]
gi|184196809|gb|ACC74772.1| ribonuclease BN [Burkholderia phymatum STM815]
Length = 305
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 87/264 (32%), Gaps = 5/264 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWP 71
D I F M S I+ S+ P ++ + G F G + V
Sbjct: 26 KDTIGRFSNHRCAMMGSSIAFYCAFSLAPTLLIVLAVLGWFFGQDAAQGRLFGQVKDIVG 85
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMRSW-- 128
A + + A G + ++ +S +L +L+ + V +
Sbjct: 86 TEAASAMQAIVEHAHRSHAGGFAALISVVLLAVGASATFSSLNTALDVVFAVRAPKGIAG 145
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
L + L + L + V + + +A+ V L + +
Sbjct: 146 VALLLRARLVSLGLVMGLAFLLVVSLVVDVAIQTVGSMLFGTDALNAFADAAQSVFGLAL 205
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L +GL + +LP + G + G LF Y+ T S+
Sbjct: 206 LTVGLGALIKWLPDTHVAWRPAVVGGFVAAFLFTAGRHLFVLYLAHAGTAGAF-GAAGSL 264
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+++LY V F+LGAE+ A++
Sbjct: 265 AVLMMWLYFCAVVFLLGAEVTATL 288
>gi|289426582|ref|ZP_06428322.1| putative ribonuclease [Propionibacterium acnes J165]
gi|295130648|ref|YP_003581311.1| putative ribonuclease [Propionibacterium acnes SK137]
gi|289160226|gb|EFD08390.1| putative ribonuclease [Propionibacterium acnes J165]
gi|291375430|gb|ADD99284.1| putative ribonuclease [Propionibacterium acnes SK137]
gi|332675491|gb|AEE72307.1| putative tRNA-processing ribonuclease [Propionibacterium acnes 266]
Length = 418
Score = 99.3 bits (246), Expect = 5e-19, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 92/273 (33%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A F G A+ I+ +L++ P + F + G + + + VV
Sbjct: 16 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 75
Query: 71 PEVIAKPITDEILQVLAV-----PAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
+I ++ + F +S L A + V +R + +
Sbjct: 76 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 135
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 136 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 196 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 254
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 255 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 287
>gi|78183942|ref|YP_376377.1| serum resistance locus BrkB-like [Synechococcus sp. CC9902]
gi|78168236|gb|ABB25333.1| serum resistance locus BrkB-like [Synechococcus sp. CC9902]
Length = 332
Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 107/297 (36%), Gaps = 20/297 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
++ F ++ A + + + +++ + L S FP ++ ++A G +
Sbjct: 26 QKAFRWFVLSLWRASQRWSDAACVDLSAAFAYFTLQSFFPLLLIALSVAARVFGRTDSLD 85
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I V P + + ++A + +SN L+ +R +
Sbjct: 86 KLITFVAQILPPSAVDLVDSTLRGLVAQGFGA-GLFGVVVLIITASNAYLTLQRGADRLW 144
Query: 121 RVVEM------------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ + R+ +F +L +V ++ L A++
Sbjct: 145 SEILPSASINSPLSTQIYQFVRARVEAFVIILAIAVLILADQIAAGFRWLPEAFIGNLDY 204
Query: 169 ALGNLLLIIW------NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ +L+L++ G+I LAL + + + LP+ + IM ++PG I +
Sbjct: 205 YIPSLMLLVRESPIVSIGQILLPALALSLMALLLQRVLPSRRVPIMPLIPGSILIGLGLS 264
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +V+ Y + ++ ++++++GV G + + R+
Sbjct: 265 FLNAALSLSLVSLGNRFQAYGVIGGVLVLTLWVWLVGVILYFGQCWSVELAASRMRR 321
>gi|332638721|ref|ZP_08417584.1| hypothetical protein WcibK1_08523 [Weissella cibaria KACC 11862]
Length = 296
Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 6/267 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+I I+ + D +S I+ LLS+FP I+ A L + G + T + V A
Sbjct: 12 RVIKTIIDVSMRVDIVTASSSIAYFGLLSIFPAIIIIATLLPYFGL--TISTALSYVQMA 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + I +L G+ + S + + S V ++R + N Y V
Sbjct: 70 VPTSVYDFARPIIESILGQKGVGVLSASIIITLWSLSRVVASIRTAQNGIYGVQPKTIAI 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I R IS +++L + I+ + L + P NL+ I + + + L
Sbjct: 130 IDRFISMAWMILVLGIMGILLIIASVGSNILEAL----PISANLVQQIESAKSPVVIGGL 185
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FIG + LP K ++ L G I + A +F Y+ S T Y L+S +
Sbjct: 186 FIGASLFNWVLPVKKPRLQWALVGTIVQVAIVIWLAKIFGWYVSLASQAYTFYQALSSAI 245
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
L+++ + + ++G + A++ +
Sbjct: 246 ILLLWINFIALAALIGTIVTATLEELF 272
>gi|89073408|ref|ZP_01159932.1| putative membrane protein [Photobacterium sp. SKA34]
gi|89050895|gb|EAR56369.1| putative membrane protein [Photobacterium sp. SKA34]
Length = 320
Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/277 (14%), Positives = 93/277 (33%), Gaps = 11/277 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVF 67
D + A + F + G + I+ + LS+ P ++ AGF+ A + ++ID +
Sbjct: 36 DHLIRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFILASNASLLNSIIDKIV 95
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR- 126
+ + + + A Y + + LR ++ R V R
Sbjct: 96 AGVTDPNLATTLKNTVNIAISQRTTVGLSGLAIALYSGISWMGNLREAIRAQTRDVWERK 155
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWN 179
+ + + + L+ + A A + + L ++
Sbjct: 156 PEDKDHFLLQYVKDLVALTGLVGALIFTVVLTSVAGSAQATIVNALGLGNITWLRPVLTA 215
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A ++ +++ LP + +++ G + I + T + ++ S
Sbjct: 216 TALTISICANYLMFLWIFWMLPKRRFNRWALMKGTLLAAIGFEAIKFAMTFMLPKLAS-S 274
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A SI+ + F Y + A A+ +
Sbjct: 275 PSGAAFGSIIGLMAFFYFFARLTLFCAAWIATANEHR 311
>gi|292654417|ref|YP_003534314.1| ribonuclease BN [Haloferax volcanii DS2]
gi|291370911|gb|ADE03138.1| ribonuclease BN [Haloferax volcanii DS2]
Length = 445
Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 88/273 (32%), Gaps = 18/273 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + ++ E++ +A+ IS AL+S+ P +V G +A +G
Sbjct: 1 MSANIRTAVPVARAVVDTIREKEISFLAASISYYALVSLIPLLVLGVVVATAVGGAALQA 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +V + + + + + + + L I+ +R Y
Sbjct: 61 QLQTLVEQYLVPTGQGLVEEALSD--RTGQGSVGAVGLGLTVWGALKLFRGLDIAFSRIY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R + + T+ + + + +
Sbjct: 119 GSEAGGLLDQLRDGAIALASIGVGTIGVAVLTAL--------------LGLLDVPFLQLL 164
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ P A ++PG +F + W + V F Y ++
Sbjct: 165 SPLLLLLTLCAAFFPLYYVFPDADLSPRQVVPGTVFAAVGWTLLGVGFGIYASVAG--AS 222
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ L +++ + + Y G+ I GA +NA +
Sbjct: 223 VAGALGTLLLLVTWFYFSGLILISGAVVNAVLA 255
>gi|161507147|ref|YP_001577101.1| hypothetical protein lhv_0656 [Lactobacillus helveticus DPC 4571]
gi|160348136|gb|ABX26810.1| Predicted membrane protein [Lactobacillus helveticus DPC 4571]
Length = 307
Score = 99.3 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 108/264 (40%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 23 LSQGEIIDSSIVIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYLNLIFPDQVSSFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + L + + V L + F + + I++ R L + +
Sbjct: 141 LIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSYRYPVIFLIIILA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K I PGV T W+ + LF+ Y+ F Y + + + +
Sbjct: 201 VFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWKNYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + + F+ G +NA++I
Sbjct: 261 LWLNIASLLFLFGVAVNATIIRNR 284
>gi|15672595|ref|NP_266769.1| hypothetical protein L1778 [Lactococcus lactis subsp. lactis
Il1403]
gi|12723510|gb|AAK04711.1|AE006294_6 hypothetical protein L1778 [Lactococcus lactis subsp. lactis
Il1403]
Length = 297
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 59/282 (20%), Positives = 115/282 (40%), Gaps = 5/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + ++ + F + + ++ LL++FP + N+ FL +
Sbjct: 1 MKKVIQKIAELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIVGNILPFLHINTTA- 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + K I I +L GL ++S LA + S + AL++S+N+AY
Sbjct: 60 -LLSFLSEQLPSDVYKGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + ++R+I + L + L L V + FP +L + N
Sbjct: 119 EVFNHRDFIVSRIIGLAAGFAILLFLYFSIVLSTFGQLILEQVHRLFPFDDHLYRTLHNM 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A +A F+ L+ ++ LP K + + +PG IF+ V Y+
Sbjct: 179 TLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRL 238
Query: 240 TMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ +++ + I+GA LNA K
Sbjct: 239 DDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGK 280
>gi|207722607|ref|YP_002253043.1| ribonuclease rnase bn (rbn) protein [Ralstonia solanacearum MolK2]
gi|206587789|emb|CAQ18371.1| ribonuclease rnase bn (rbn) protein [Ralstonia solanacearum MolK2]
Length = 323
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 99/285 (34%), Gaps = 7/285 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSMLKGAWLVLTGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRA 119
+ + G A + + ++A+ ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGTQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVAGATTVFSELKDSLDEL 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN----LLL 175
+ V + + ++ + + + ++ + I A V + F +
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAALAVVERFWGAVWMGTVFAV 189
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + + + + LP + + G + T + + +G L Y+
Sbjct: 190 VANALSMVFSFAVVALLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLGN- 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 249 SAVASSYGAAGSVVALMLWVYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|239929348|ref|ZP_04686301.1| ribonuclease BN family membrane protein [Streptomyces ghanaensis
ATCC 14672]
Length = 302
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 34/269 (12%), Positives = 93/269 (34%), Gaps = 8/269 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + E +A+ ++ ++ +++FP + A + T+ D
Sbjct: 16 RLMLTHAWRSYERLDRVHWTRLAAAMTFTSFVALFPLLTVAAAIGAATLGQDRQETLQDA 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-E 124
+ P + + +++Q A + I+ + + R L + + E
Sbjct: 76 ITDQVPGISDELNVGDLVQ----NAGTVGLIAGTVLLFTGIRWAGSTRECLRAVWELPDE 131
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWNGRI 182
+ ++ R G ++ L++ + + G +++
Sbjct: 132 EENPFLRRGKDAGVLVGLGGALLVTLAASTVASALVGRISDAIGLEKGGWGGVVLRIAAF 191
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ A F+ L++V LP + +L I + + + +L + Y+ + S MY
Sbjct: 192 AVAVGADFLLLLYVLTLLPGVEPTRHRLLVAAITGAVGFELLKLLLSGYMQGVAAKS-MY 250
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 251 GAFGVPVALLLWINFTAKLVLFCAAWTAT 279
>gi|50842566|ref|YP_055793.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
KPA171202]
gi|50840168|gb|AAT82835.1| putative tRNA-processing ribonuclease [Propionibacterium acnes
KPA171202]
Length = 418
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 92/273 (33%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A F G A+ I+ +L++ P + F + G + + + VV
Sbjct: 16 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 75
Query: 71 PEVIAKPITDEILQVLAV-----PAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
+I ++ + F +S L A + V +R + +
Sbjct: 76 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 135
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 136 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 196 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 254
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 255 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 287
>gi|83747126|ref|ZP_00944170.1| Ribonuclease BN [Ralstonia solanacearum UW551]
gi|207738553|ref|YP_002256946.1| ribonuclease rnase bn (rbn) protein [Ralstonia solanacearum
IPO1609]
gi|83726256|gb|EAP73390.1| Ribonuclease BN [Ralstonia solanacearum UW551]
gi|206591921|emb|CAQ58827.1| ribonuclease rnase bn (rbn) protein [Ralstonia solanacearum
IPO1609]
Length = 323
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 99/285 (34%), Gaps = 7/285 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSMLKGAWLVLAGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRA 119
+ + G A + + ++A+ ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGTQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVAGATTVFSELKDSLDEL 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN----LLL 175
+ V + + ++ + + + ++ + I A V + F +
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAALAVVERFWGAMWMGTVFAV 189
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + + + + LP + + G + T + + +G L Y+
Sbjct: 190 VANALSMVFSFAVVALLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLGN- 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 249 SAVASSYGAAGSVVALMLWVYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|16126083|ref|NP_420647.1| ribonuclease BN [Caulobacter crescentus CB15]
gi|221234853|ref|YP_002517289.1| ribonuclease BN [Caulobacter crescentus NA1000]
gi|13423279|gb|AAK23815.1| ribonuclease BN, putative [Caulobacter crescentus CB15]
gi|220964025|gb|ACL95381.1| ribonuclease BN [Caulobacter crescentus NA1000]
Length = 328
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 92/280 (32%), Gaps = 6/280 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + ++ A+ D +S ALL+VFP + L +
Sbjct: 31 HWVREILRVLGLALSRLWGRDVMLYVGGVSFFALLAVFPGLAILIGLYSLFLTPETAAWQ 90
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRA 119
+ P + DE+ ++ P + + S + Y + G +AL L+
Sbjct: 91 AVKLAELIPSGARSIVQDELSRLAHAPGQTISLQSGVVLIVGAYAAHRGFKALLAGLSFI 150
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ R + L++ ++ A L IMS +F+ + L + A + + W
Sbjct: 151 HDEENQRGFLGFNLMALLVLMAAFGLLFIMSGIFLTLRLLGTALELRPLAGVSWIQSEWT 210
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+A+ + + + + + G + V + Y+
Sbjct: 211 ---WASFGIVVGMSLVYRYAMSRQIVGWRASIAGGVAAAALCVFMSWASAFYVEKVVHLG 267
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y +++++ L++L G L + I +
Sbjct: 268 ATYGSVSAVIIFLIWLSWSVNAIFFGGALATEVEIALDER 307
>gi|299070022|emb|CBJ41308.1| putative ribonuclease BN [Ralstonia solanacearum CMR15]
Length = 324
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 38/285 (13%), Positives = 98/285 (34%), Gaps = 7/285 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + ++ A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSIVKGAWLVLAGAVQQWSAHRAASKGAALSFYTLFSMAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRA 119
+ + G A + + ++A+ ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGAQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVVGATTVFSELKDSLDEL 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V + + ++ + + + ++ + I A V + F +
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAGLAVVERFWGAIWTGSVFAI 189
Query: 180 GRIYATMLALFIGLIFV----HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+M F + + LP + + G + T + + +G L Y+
Sbjct: 190 AANALSMAFSFAVVSLLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLGN- 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 249 SAVASSYGAAGSVVALMLWIYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|53803574|ref|YP_114581.1| ribonuclease BN [Methylococcus capsulatus str. Bath]
gi|53757335|gb|AAU91626.1| putative ribonuclease BN [Methylococcus capsulatus str. Bath]
Length = 430
Score = 99.0 bits (245), Expect = 6e-19, Method: Composition-based stats.
Identities = 48/241 (19%), Positives = 90/241 (37%), Gaps = 2/241 (0%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
+ E A + ++LLS+ P + ++ G H + ++ + E +
Sbjct: 31 REYREGGIRHRAMSLVYTSLLSLAPLLAVSFSVLKAFGVHNEIQPLLLEMLAPLGEKARE 90
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ I V + L + L Y + +E + S N +RV R Y
Sbjct: 91 VTDNVIGFVGNIQVGVLGFVGFLMLFYTVVSLLEQIEDSFNHIWRVSRTRPLYRQFSDYL 150
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
VL+ V L + ++ + + AL + I + + F
Sbjct: 151 SIVLIGPVLLFSAIGIAASMSSM--EIVRRLIALEPFGTAYYLAGIVLPYVLIVAAFAFA 208
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ F+P K L G +F +SW LF + V + YS +Y+G A I+ +++LY
Sbjct: 209 YSFIPNTAVKWRPALAGGLFAGLSWKATGFLFAEFTVNSAHYSAIYSGFAVILLSMIWLY 268
Query: 257 M 257
+
Sbjct: 269 L 269
>gi|295689518|ref|YP_003593211.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
gi|295431421|gb|ADG10593.1| ribonuclease BN [Caulobacter segnis ATCC 21756]
Length = 320
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 91/275 (33%), Gaps = 6/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ ++ A+ D +S ALL+VFP + L + + +
Sbjct: 28 ILRVLGLALSRLWGRDVMLYVGGVSFFALLAVFPGLAILIGLYSLFLTPETAARQANKLA 87
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVE 124
P DE ++ P + SA+ Y + G +AL L+ +
Sbjct: 88 ELIPSGARGMFQDEFGRLAHAPGSAVSLQSAVVLIVGAYAAHRGFKALLAGLSFIHDEEN 147
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ L++ ++ A L MS VF+ + L + + A + + W +
Sbjct: 148 QRGFFGFNLMALLVLIAAFGLLFFMSGVFLTLRLLGSALNLRPLAGVSWIQSEWTWASFG 207
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + + + P + G + V + Y+ Y
Sbjct: 208 IVVGMTLVYRYAMSRAP---VGWRASTSGGVAAAALCVFMSWASAFYVEKIVHLGATYGS 264
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++++ L++L G L + I +
Sbjct: 265 ISAVIIFLIWLSWSVNAIFFGGALATEVEIALDER 299
>gi|126643052|ref|YP_001086036.1| putative ribonuclease (Rbn) [Acinetobacter baumannii ATCC 17978]
Length = 366
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 29/239 (12%), Positives = 84/239 (35%), Gaps = 4/239 (1%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
+ + + A + + + + + D+ L + L I L
Sbjct: 1 MLTVFLVIISSIKALEPARQQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFL 60
Query: 102 AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA 161
+ + ++ NR +RV E RS + + + + L + L + +
Sbjct: 61 FVTTVLMLTSIETVFNRIWRVKETRSGIVGFMRYWTIISLGPIILGSAFVISSTVASMNL 120
Query: 162 YVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
F + ++ + + +G ++ +P + + + +
Sbjct: 121 LSNNFTGYQLDGAFLL----WLISFVLTILGFFILYWTIPNRTVPLYAAAIAACLSAALF 176
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LF+ + F++Y +Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 177 ETLKNLFSFVMSNFTSYEIIYGAFAAVPIFLLWVFLSWNIVLLGVEVSFALTAFHSGKE 235
>gi|99034616|ref|ZP_01314573.1| hypothetical protein Wendoof_01000616 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 256
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 57/260 (21%), Positives = 114/260 (43%), Gaps = 12/260 (4%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIAKPITD 80
DG A ++S LLS+FPF++ +A + + P+ I +
Sbjct: 7 NDGVEHAGYLSFLILLSIFPFLIVLMAVASTFANFLDQYNIGWVFIIDNMPQDILSSLMP 66
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I ++++ P + L T++ + A + +S+ +E LR LN+AY+V + + R++S L
Sbjct: 67 RIREIISGPPQSLLTLAIVGAVWTASSTIEGLRTILNKAYKVPVSPPYILRRVLSILQFL 126
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ ++ + + +P+ + + + + R LF + +++ L
Sbjct: 127 VITLIITLTIVFSTLVPMLIDFSYQG----------LSYTRYLLIEFVLFTVVSWLYFML 176
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMTCLVFLYMLG 259
P K + + PG I W + A F Y+ +F +Y L ++ L+F YML
Sbjct: 177 PNIKQNLSDVFPGSCVAVILWTISASAFKQYLKASFDQLDLIYGSLGGVVVSLLFFYMLS 236
Query: 260 VFFILGAELNASMIIYYWRK 279
+ FI GA+ N + + +
Sbjct: 237 LIFIYGAKFNFQLKYFNESR 256
>gi|300698341|ref|YP_003749002.1| ribonuclease BN [Ralstonia solanacearum CFBP2957]
gi|299075065|emb|CBJ54636.1| putative ribonuclease BN [Ralstonia solanacearum CFBP2957]
Length = 323
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 36/285 (12%), Positives = 98/285 (34%), Gaps = 7/285 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
R + + A++ + + + +S L S+ P +V ++AG F G
Sbjct: 10 RSMLKGAWLVFAGAVQQWSAHRAASKGAALSFYTLFSLAPVLVLVISIAGLFFGEQAARG 69
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRA 119
+ + G A + + ++A+ ++ L+ SL+
Sbjct: 70 EIFGQIQGLVGTQGAAAVEAVLAATRRSGHGLFAAVTAMVLLVAGATTVFSELKDSLDEL 129
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN----LLL 175
+ V + + ++ + + + ++ + I A V + F +
Sbjct: 130 WDVPPRQQAGLWGVLRSRLLSFSLILVLAFLLLVSLIVNAALAVVERFWGAMWMGSVFAV 189
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + + + + + LP + + G + T + + +G L Y+
Sbjct: 190 VADAVSMVFSFAVVALLFGTIFKMLPETRVAWRDVGLGAVVTALLFTLGKHLIGLYLGN- 248
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S ++ Y S++ ++++Y F GA + + + ++
Sbjct: 249 SAVASSYGAAGSVVALMLWVYYSAQIFFFGALVTRQYALRFGSRQ 293
>gi|116511406|ref|YP_808622.1| ribonuclease BN-like family protein [Lactococcus lactis subsp.
cremoris SK11]
gi|116107060|gb|ABJ72200.1| Ribonuclease BN-like family enzyme [Lactococcus lactis subsp.
cremoris SK11]
Length = 301
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 113/282 (40%), Gaps = 5/282 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ + ++ + F + + ++ LL++FP + N+ FL
Sbjct: 5 MKKGLQKIGELTTTFMTFFKSSEMSLSSIAVAYYLLLAIFPLGLIIGNILPFLHID--TS 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ + P + + I I +L GL ++S LA + S + AL++S+N+AY
Sbjct: 63 GLLSFLSEQLPSDVYRGIEPVINNLLNQRNTGLLSLSVLAGFWTFSRALSALQMSMNKAY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V R + ++R+I + L + L L V + F +L + N
Sbjct: 123 EVFNHRDFIVSRVIGLAAGFAILLFLYFSIVLSTFGQLILEQVHRIFAFDDHLYRTLHNM 182
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ A +A F+ L+ ++ LP K + + +PG IF+ V Y+
Sbjct: 183 TLPAIAVATFLSLMMLYFILPNVKIRKLRYTMPGTIFSTFVLVFLTNWIAKYVSFALQRL 242
Query: 240 TMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ S++ +++ + I+GA LNA K
Sbjct: 243 DDLKLIGSLVVFALMIWFIFIARVLIIGAILNAVYQKTKVGK 284
>gi|254000056|ref|YP_003052119.1| cyclic nucleotide-binding protein [Methylovorus sp. SIP3-4]
gi|253986735|gb|ACT51592.1| cyclic nucleotide-binding protein [Methylovorus sp. SIP3-4]
Length = 426
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 98/273 (35%), Gaps = 7/273 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + F I + + F +G+++++ +S A+ ++ P + + L
Sbjct: 26 RRRYRTPFFIFRETLSAFQLHNGFSISASLSFYAMFALIPMALLIFFMLSHLVVSSNYAI 85
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V + + + ++ A + + ALR + +
Sbjct: 86 VKLAILTSNLVPKFSHRIMIEVYNVSKHQAVWGAFGMFALFWIVTPLAGALRSAFHTIAA 145
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+VE S+ ++ VL + I + + + + + +
Sbjct: 146 MVEEPSFIKRKIKDVIGVLGILLLFFIFTLMGLGLEKVIDFF-------NPSATHTKLID 198
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++++ + + + A+ + +IL G T I W+ F ++ +Y T+
Sbjct: 199 NVSSIVICTVLIAIFYRIFFPARISLKNILIGSAITGIMWIAMRPAFGLFLSLNQSYDTV 258
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ G+ ++ + +LY F+LG EL +++
Sbjct: 259 FGGMKNMFISIGWLYYTFAVFLLGTELISTLHK 291
>gi|254176627|ref|ZP_04883285.1| putative ribonuclease BN [Burkholderia mallei ATCC 10399]
gi|160697669|gb|EDP87639.1| putative ribonuclease BN [Burkholderia mallei ATCC 10399]
Length = 295
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 10 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 69
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 70 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 129
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 130 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 189
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 190 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 248
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 249 VLLMWLYFSAAVLLL 263
>gi|226226515|ref|YP_002760621.1| tRNA-processing ribonuclease BN [Gemmatimonas aurantiaca T-27]
gi|226089706|dbj|BAH38151.1| tRNA-processing ribonuclease BN [Gemmatimonas aurantiaca T-27]
Length = 333
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/287 (17%), Positives = 106/287 (36%), Gaps = 10/287 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--- 57
+R+ +DI + E++ +A ++ + LL++ PF++ FL +Q
Sbjct: 9 IRQKAESWWDIARRVWQQSAEDNVPFLAGGLAFNILLALVPFVLLLIGGLSFLLGNQPAE 68
Query: 58 FVPTVIDVVFGAWP--EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
V TV +V P A + ++ + + SA+ A+FS+ +LR
Sbjct: 69 AVDTVTSLVGRLLPNGSNAADALLRGVISDVLETRGAVTLYSAIGFAWFSTRLFGSLRSV 128
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA----LAYVRKFFPALG 171
L RS +L +A++ +V+ + LA L +R+
Sbjct: 129 L-ALTFDGSDRSIVAGKLFDLLATAVATLAVVVYVVFSAYLDLATTRGLTLLREVGLRES 187
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+ + + +L +F ++ LP + + G + + + LF
Sbjct: 188 AMGGLAYLIGRALAVLLVFALFSALYRGLPRTRPPVRVAFVGGATAAVLFEIARHLFAIV 247
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ S +A+I+ + + Y F++G E+ + +
Sbjct: 248 VRNADPSSLYTGTIAAIVAVVFWTYYAAFLFLIGGEVAQAYDLRQRE 294
>gi|146319270|ref|YP_001198982.1| hypothetical protein SSU05_1616 [Streptococcus suis 05ZYH33]
gi|146321474|ref|YP_001201185.1| hypothetical protein SSU98_1627 [Streptococcus suis 98HAH33]
gi|145690076|gb|ABP90582.1| Predicted membrane protein [Streptococcus suis 05ZYH33]
gi|145692280|gb|ABP92785.1| Predicted membrane protein [Streptococcus suis 98HAH33]
gi|292558903|gb|ADE31904.1| RNase BN [Streptococcus suis GZ1]
Length = 313
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ D + ++ L+S+FP ++ ANL + V ++ VV P+ +
Sbjct: 23 FFSFYRSADSDVTSVAVAYYLLISIFPILLTLANLLPYYPFD--VDMILSVVAEFVPDKL 80
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I VL P+ IS L + S + L+ + N+AY + E R + I LI
Sbjct: 81 YPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLI 140
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ V +++ + +Y+ K P L + + ++ALF L+
Sbjct: 141 GIFLGIGLQVIILLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFTALV 200
Query: 195 FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM--TC 251
++ FLP + K+ + PG +F ++ LF+ Y+ ++ + + +++
Sbjct: 201 MLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVF 260
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + I+GA +NA++ +
Sbjct: 261 MLWFIFMAQVLIIGAMINATVQSMQVEE 288
>gi|90413234|ref|ZP_01221229.1| putative membrane protein [Photobacterium profundum 3TCK]
gi|90325786|gb|EAS42244.1| putative membrane protein [Photobacterium profundum 3TCK]
Length = 318
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 90/272 (33%), Gaps = 11/272 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + A + F + G + I+ + LS+ P ++ AGF+ + +ID +
Sbjct: 34 DHLLRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFVLAANSDLLTGLIDKIV 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR- 126
+ + + + A Y + + LR ++ R V R
Sbjct: 94 TGVTDPSLAKTLENTVNTAINQRTTVGLSGLAIALYSGISWMGNLREAIRAQTRDVWERK 153
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWN 179
+ F + L+ + A + + + L +
Sbjct: 154 PEDKDHLLLQYGKDFVALTGLVAALIFTVALTSVAGSAQKTIVEALGLGGITWLRPALTL 213
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A ++ +++ LP K + ++L G + I + V T + + + S
Sbjct: 214 IALTISITANYLMFLWIFWMLPKKKLETRALLQGTLLAAIGFEVIKFAMTIILPSLAK-S 272
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A SI+ + F Y + A A+
Sbjct: 273 PSGAAFGSIIGLMAFFYFYARLTLFCAAWIAT 304
>gi|311277551|ref|YP_003939782.1| ribonuclease [Enterobacter cloacae SCF1]
gi|308746746|gb|ADO46498.1| ribonuclease [Enterobacter cloacae SCF1]
Length = 311
Score = 99.0 bits (245), Expect = 7e-19, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 94/284 (33%), Gaps = 11/284 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ AGF+ + + D
Sbjct: 24 VIAHLLRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAAGFVLASHPTLLQDIFDK 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + L A Y N + LR ++ R V
Sbjct: 84 ILMNVSDPTLAATLKSTINTAVQQRTTVGIVGLLIALYSGINWMGNLREAIRAQSRDVWE 143
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R ++ F ++ + L++ + A + + ++ L
Sbjct: 144 RTPQDREKIWVRYFRDFVSLIGLLLALIVTLSITSISGAAQQTIISALYLDSIEWLKPAW 203
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + ++ T + T
Sbjct: 204 RLIGLAISIFANYLLFFWIFWRLPRQRPRKKALIRGTFIAAIGFEAIKMIMTWTLPTLVK 263
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 264 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATADYKDDPQMP 306
>gi|289425487|ref|ZP_06427264.1| putative ribonuclease [Propionibacterium acnes SK187]
gi|289154465|gb|EFD03153.1| putative ribonuclease [Propionibacterium acnes SK187]
Length = 418
Score = 99.0 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 92/273 (33%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A F G A+ I+ +L++ P + F + G + + + VV
Sbjct: 16 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVVAFAFAVLGLVLSRLSPYLLNQVVDSVV 75
Query: 71 PEVIAKPITDEILQVLAV-----PAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
+I ++ + F +S L A + V +R + +
Sbjct: 76 GLATESSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 135
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + +L L + ++ + ++ + L++
Sbjct: 136 MVGDDRGFMRAKLSDMLTFLGLLLVTLLTIITSQVGSSMTGMLARWTGLDSVPGYGLLLT 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V Y+V
Sbjct: 196 LAGLVATTIAGWLLFIFLYTVMPRVKTSWPPILKGSLAAGFALALVQVGAG-YLVRAFNS 254
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 255 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 287
>gi|328953822|ref|YP_004371156.1| ribonuclease BN [Desulfobacca acetoxidans DSM 11109]
gi|328454146|gb|AEB09975.1| ribonuclease BN [Desulfobacca acetoxidans DSM 11109]
Length = 441
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 93/279 (33%), Gaps = 5/279 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R Y I++ A + + + S ++ S++L++ P + + +G
Sbjct: 26 RPYVYAGLQILFLAGKDLLRKRALVRTSALAYSSILALIPLLALLFAIFKGIG---LQRQ 82
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + V L + + + + N +
Sbjct: 83 LAAHLLPQLAGGSQDFARQILEYVEGTNVASLGVFGVIWLLVALMFLMANVEQAFNHIWG 142
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ RSW+ LL + + + + + L +
Sbjct: 143 ISRSRSWWRKLSDYLSIFLLFPILMAVAISLTTTFQRHPEVQQFMKNFLPDA--FFSAYN 200
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + +++G FV+L +P + + +S + G I W V +F + + Y+ +
Sbjct: 201 LLFSFGVVWLGFTFVYLVMPYTRVQFISAVLGGITGGALWQVAQWIFHLFQSSAPYYNAI 260
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y L ++ +++++ + + GAE+ ++
Sbjct: 261 YGALYQLLFLVIWMFWSWLIVLYGAEVAYVHQNLTALRQ 299
>gi|312143543|ref|YP_003994989.1| ribonuclease BN [Halanaerobium sp. 'sapolanicus']
gi|311904194|gb|ADQ14635.1| ribonuclease BN [Halanaerobium sp. 'sapolanicus']
Length = 435
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 100/273 (36%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I + E D A ++ ++L++ PF++F + + T+++ +
Sbjct: 28 FIIRVYQKSRENDILIQAMGMAYISILTIVPFLIFSFYIMTLFNFFGRLDTIVEQIKNVI 87
Query: 71 PEVIAKPITDEILQ-----VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+A + ++ + V + L +S L+ + + ++ N+ + V E
Sbjct: 88 LNNLAAGTGETLINYLEIYIFNVDIEQLGAVSFLSLIILIVFMLARVEVTFNQIWSVREH 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + + + T +I + + LA Y+ P N +
Sbjct: 148 RDIVKRFVA--FWTFITLGTFLITLLLTATLVLAEQYLGLGMPGSRISES---NIFNWIL 202
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS---TMY 242
F+ I + F+P ++ + + +++ ++T Y +S +Y
Sbjct: 203 FSFNFLVFIIAYYFIPNRDVDPLAATFAGLISGGLFILSKNIYTIYTRNLVVHSYERQIY 262
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L I LV+LY++ + ++GA ++
Sbjct: 263 GSLYVIPFFLVWLYLIWLIVLIGAVISYVFHYR 295
>gi|167908634|ref|ZP_02495839.1| putative ribonuclease [Burkholderia pseudomallei NCTC 13177]
Length = 297
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 261 VLLMWLYFSAAVLLL 275
>gi|318081022|ref|ZP_07988354.1| ribonuclease BN family membrane protein [Streptomyces sp. SA3_actF]
Length = 331
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 94/262 (35%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E + +A+ ++ ++ L++FP + + V + V P
Sbjct: 23 WRCYERLDDVRWARLAAAMTFTSFLALFPLLTVAVAVVAGAFGQDRVHDLESRVKEQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-SWYIT 131
+ + ++ A + ++ A + N V ++R SL +R+ E ++ +
Sbjct: 83 IANQLDLQGLVD----NAGTVGVVAGAALLFTGINWVGSMRESLRAVWRLPEDPGNFLLA 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLAL 189
++ G ++ ++ A A+ + + + + ++ +
Sbjct: 139 KVRDAGVLIGLGAAGLVTVVASAASTTAIGWTARHLGIAEDGVGGVLLRVLSFAVAVGTD 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + ++ + I + + +L YI ++ + MY +
Sbjct: 199 FLLLLYVLSLLPRVHPRRRRLVFAALIGAIGFELLKLLIGGYISGVASKN-MYGVFGVPI 257
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A
Sbjct: 258 ALLLWINFTAKLLLYCAAWTAV 279
>gi|271967948|ref|YP_003342144.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270511123|gb|ACZ89401.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 324
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 107/276 (38%), Gaps = 14/276 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQFVPT 61
+ ++ + V +A + ALLS+ PF++ + G L
Sbjct: 41 WALVTATVNAGVTYRVTGLAGEAAFFALLSLPPFMLGLIGVLGQLTRVFGPETLQNVRDW 100
Query: 62 VIDVVFGAWPEVIAKPITDEILQ--VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + + + +++ + L ++ L A + S + ++ A
Sbjct: 101 IDAQAHLLFTDNAVDSVVTPLVEDVLKPENQVSLISLGFLLALWSGSRALFVYVDLISVA 160
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y + E R TRL+SFG+ L + +++ V V P AL + ++
Sbjct: 161 YGLGEERGIIRTRLMSFGFYLAGLLVGLLVMPVLVLGPAALRGA-----LPPDYAPLVDI 215
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ L ++ +++ LPG + +I W+ A + + + +
Sbjct: 216 LYWPVVIIGSVFFLTLLYHVSVPVRTRWWRELPGAVLAFIIWIACAAVLRAVLAAWFSPV 275
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
++Y LA+ + L++LY+ + ++GA LNA +
Sbjct: 276 SIYGSLAAPIAVLLWLYITALAVLIGATLNAEVDRL 311
>gi|87125235|ref|ZP_01081081.1| similar to serum resistance locus BrkB [Synechococcus sp. RS9917]
gi|86167004|gb|EAQ68265.1| similar to serum resistance locus BrkB [Synechococcus sp. RS9917]
Length = 291
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 37/290 (12%), Positives = 102/290 (35%), Gaps = 21/290 (7%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVVF 67
++ A + E D +++ + L S+FP ++ + + ++D
Sbjct: 2 RSLWQAYVRWAECDCVDLSAAFAYYTLQSIFPLLLIVLAVTSWFLGRQEGLDQQIVDYTA 61
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY------- 120
G P + + + +++ G + A + N L+ +R +
Sbjct: 62 GVLPPMAVGIVQTTLEKLI-KQGFGAGLLGAGVLLVTAGNVYLTLQRGADRIWLDYYPDA 120
Query: 121 -----RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-- 173
++ + RL +F V+L + +V+ + + + L L
Sbjct: 121 APEATWRQQVIQFLRVRLEAFFLVILIGLLIVLDQISANLRMIPATALHRSLEGLPWLDQ 180
Query: 174 ----LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ ++ G+ L + + FLP+ + + ++PG + V + +
Sbjct: 181 ALRSIPVLSFGQFVVPCLGFAGMALLLQFFLPSRRVPLRPLIPGSFLIGVLLTVLNLAVS 240
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
I++ + Y + S++ ++++ +GV G + + ++
Sbjct: 241 RSILSLGSRYQAYGVIGSVLVLTLWVWTVGVVIYFGQCWSVVLAKQRLKR 290
>gi|322375520|ref|ZP_08050033.1| putative ribonuclease BN [Streptococcus sp. C300]
gi|321279783|gb|EFX56823.1| putative ribonuclease BN [Streptococcus sp. C300]
Length = 286
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 50/284 (17%), Positives = 126/284 (44%), Gaps = 7/284 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELMDRPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P+ + + + +VL P+ GL + + L+A + S ++ L+ + N+
Sbjct: 59 VSNFLLTIKEFLPDTVYDVVAKIVREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +L+S + F+ + + L ++ ++ + L +
Sbjct: 119 AYGVTKSRGIISHQLMSLLVSFGLQILFAFALFLSMFGRMLLNLLKTYWQSDSPLFSYLQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +F L+ ++ FLP K +I +LPG +F ++ + +F+ Y+ ++
Sbjct: 179 DFTGPLVYALIFAILVMIYYFLPKVKAPRIRYVLPGSVFVLLTLIFLLNIFSVYVNSYVN 238
Query: 238 YSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +SI+ + + ++ I+GA +NAS+ +
Sbjct: 239 HLVDVRFFSSIIVVVMMFWFILIAKILIIGAVINASVQSLKDPE 282
>gi|260102705|ref|ZP_05752942.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260083491|gb|EEW67611.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 307
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 54/264 (20%), Positives = 107/264 (40%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 23 LSQGEIIDSSIVIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAKYLNLIFPDQVSSFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ + TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLSMLNSLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + L + + V L + F + + I++ R L + +
Sbjct: 141 LIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSYRYPVIFLIIILA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K I PGV T W+ + LF+ Y+ F Y + + + +
Sbjct: 201 VFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWKNYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + + F+ G +NA++I
Sbjct: 261 LWLNIASLLFLFGVAVNATIIRNR 284
>gi|302519515|ref|ZP_07271857.1| integral membrane protein [Streptomyces sp. SPB78]
gi|302428410|gb|EFL00226.1| integral membrane protein [Streptomyces sp. SPB78]
Length = 331
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 94/262 (35%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E + +A+ ++ ++ L++FP + + V + V P
Sbjct: 23 WRCYERLDDVRWARLAAAMTFTSFLALFPLLTVAVAVVAGAFGQDRVHDLESRVKEQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-SWYIT 131
+ + ++ A + ++ A + N V ++R SL +R+ E ++ +
Sbjct: 83 IANQLDLQGLVD----NAGTVGVVAGAALLFTGINWVGSMRESLRAVWRLPEDPGNFLLA 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLAL 189
++ G ++ ++ A A+ + + + + ++ +
Sbjct: 139 KVRDAGVLIGLGAAGLVTVVASAASTTAIGWTARHLGIAEDGVGGVLLRVLSFAVAVGTD 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + ++ + I + + +L YI ++ + MY +
Sbjct: 199 FLLLLYVLSLLPRVHPRRRRLVFAALIGAIGFELLKLLIGGYISGVASKN-MYGVFGVPI 257
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A
Sbjct: 258 ALLLWINFTAKLLLYCAAWTAV 279
>gi|258653906|ref|YP_003203062.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
gi|258557131|gb|ACV80073.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
Length = 356
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 52/282 (18%), Positives = 107/282 (37%), Gaps = 10/282 (3%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--------AHQF 58
+I + + + M+S + LS P ++ L G++ Q
Sbjct: 45 RWRKVIGRTLSKAWGDSLFGMSSQAAFWCALSTAPLLLALLGLVGYVVGWYFPAGTIDQV 104
Query: 59 VPTVIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
++ + + E +A + + + +L+ + ++ + + + S+ + A S+
Sbjct: 105 REQILIFLNAIFNEEVADNLVGNTVETILSQGQADVVSVGLVISLWAGSSAMSAFVESIT 164
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
AY E+R R + G LLA ++ +IM + P L V + I+
Sbjct: 165 IAYGQHEVRHPVAERFFALGLYLLALLSGIIMLPLLAIGPDYLPKVFPE-SWRPQVSNIV 223
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
L L L ++ P K +PG ++V + Y+
Sbjct: 224 NIAYYPTLALGLIFLLTVLYKVAPKHKHPWYRGVPGAFLAAAVFIVTSFGLRLYLSYVYA 283
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y LA+ +T L+F Y + + I+GA+ N + + YY +
Sbjct: 284 HGLTYGALATPITFLLFYYFVSMAVIIGAQFNNATLEYYPPR 325
>gi|20091117|ref|NP_617192.1| ribonuclease RN [Methanosarcina acetivorans C2A]
gi|19916218|gb|AAM05672.1| ribonuclease RN [Methanosarcina acetivorans C2A]
Length = 285
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 40/279 (14%), Positives = 103/279 (36%), Gaps = 11/279 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VI 63
+ +I I+ ++E++ ++ ++ +LS+ ++F ++ + + +I
Sbjct: 3 LGYIEKLITGTIKEWMEDNSKTYSAALAYYFVLSLPALLLFSVSVGSLFLRSKQIQDAII 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRV 122
+ G + + I + V + + I + + +SN ++ L A+ +
Sbjct: 63 SNLQGFVDQSVIDMINSLFKYIPEVNSLSVGALIGFVILLWSASNVFRQMKKFLEVAWDI 122
Query: 123 VEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + ++SF V++ L + V + ++ P ++
Sbjct: 123 EPAGSSTVKDFIKGSIVSFFVVIVFGGLLALSIIVEGVLYAVSKVFQECCPFPP---ILA 179
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
A+ L L + + V+ LP K + + G + T I +G Y S
Sbjct: 180 RYAGSIASFLILVLFFMLVYRVLPDTKLDLKPVFVGSLVTVILINIGKYAIGFYFAY-SN 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++Y + S++ + +Y + + +GAE
Sbjct: 239 PVSVYGAIGSVVGVFLLIYYISIMITIGAEFTKVYSESR 277
>gi|333026655|ref|ZP_08454719.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
gi|332746507|gb|EGJ76948.1| putative ribonuclease BN family membrane protein [Streptomyces sp.
Tu6071]
Length = 332
Score = 98.6 bits (244), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 94/262 (35%), Gaps = 8/262 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ E + +A+ ++ ++ L++FP + + V + V P
Sbjct: 23 WRCYERLDDVRWARLAAAMTFTSFLALFPLLTVAVAVVAGAFGQDRVHDLESRVKEQVPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-SWYIT 131
+ + ++ A + ++ A + N V ++R SL +R+ E ++ +
Sbjct: 83 IANQLDLQGLVD----NAGTVGLVAGAALLFTGINWVGSMRESLRAVWRLPEDPGNFLLA 138
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLAL 189
++ G ++ ++ A A+ + + + + ++ +
Sbjct: 139 KVRDAGVLIGLGAAGLVTVVASAASTTAIGWTARHLGIAEDGVGGVLLRVLSFAVAVGTD 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L++V LP + ++ + I + + +L YI ++ + MY +
Sbjct: 199 FLLLLYVLSLLPRVHPRRRRLVFAALIGAIGFELLKLLIGGYISGVASKN-MYGVFGVPI 257
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L+++ + A A
Sbjct: 258 ALLLWINFTAKLLLYCAAWTAV 279
>gi|307709513|ref|ZP_07645969.1| ribonuclease BN-like family protein [Streptococcus mitis SK564]
gi|307619732|gb|EFN98852.1| ribonuclease BN-like family protein [Streptococcus mitis SK564]
Length = 286
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 118/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWNELIDKPLVKAFLYYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + L + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMVSLLVSFGLQLLFAFALFLSLFGQMILDLLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
T LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLTYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NAS+
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASVQSLKDP 281
>gi|262047121|ref|ZP_06020080.1| methionine aminopeptidase [Lactobacillus crispatus MV-3A-US]
gi|295692490|ref|YP_003601100.1| hypothetical protein LCRIS_00628 [Lactobacillus crispatus ST1]
gi|312977780|ref|ZP_07789527.1| putative membrane protein [Lactobacillus crispatus CTV-05]
gi|260572698|gb|EEX29259.1| methionine aminopeptidase [Lactobacillus crispatus MV-3A-US]
gi|295030596|emb|CBL50075.1| Membrane protein [Lactobacillus crispatus ST1]
gi|310895519|gb|EFQ44586.1| putative membrane protein [Lactobacillus crispatus CTV-05]
Length = 307
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + +A + I+ L S+FP I+ N+ + + + +P+ ++K I
Sbjct: 23 LSQGEIFASSIIIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAEYLNLVFPDQVSKFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENRLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+F + L + I + V L ++ F N + I++ R +L + +
Sbjct: 141 TITFVFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPVLILVMMLA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L +++ LP K K I PGV T + W+ + LF+ Y+ F Y + + + +
Sbjct: 201 LWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + V F+ G +NA+++
Sbjct: 261 LWLNIAAVLFLFGVGVNAAIVRNR 284
>gi|229489464|ref|ZP_04383327.1| putative ribonuclease [Rhodococcus erythropolis SK121]
gi|229323561|gb|EEN89319.1| putative ribonuclease [Rhodococcus erythropolis SK121]
Length = 344
Score = 98.6 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 96/276 (34%), Gaps = 8/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
+ D + A F E+ G A+ I+ ++L++ P ++ +AGF+ G +++
Sbjct: 15 QRAARPWLDHLVRAAGRFQEQKGDYYAAGITYFSVLALIPIMMVAFAVAGFVLAGHPEYL 74
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + + + P + I I + + L AAY + +R +L
Sbjct: 75 ESIQEQITKSIPGSLGDTINTLIDSAID-SRASVGIFGLLGAAYAGLGWMANVRDALTAM 133
Query: 120 YRVVEMRSWYIT----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ ++ + + LA V + MS + + + +
Sbjct: 134 WESKREPKGFVRTKLGDAGALVGLALAMVVSLGMSALSSGPVATQIVKWLNLENITGVGV 193
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + ++LA + ++V LP + S + + + + + Y+
Sbjct: 194 GLRVVSLLLSLLATWAVFLWVIARLPREPVTLRSAAQAALIAAVVFEIFKQVGAIYLAAV 253
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ I+ LVF++ + A+
Sbjct: 254 TN-GPAGVAFGPIIGLLVFVFTASRMLLFCTAWAAT 288
>gi|332293345|ref|YP_004431954.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
gi|332171431|gb|AEE20686.1| ribonuclease BN [Krokinobacter diaphorus 4H-3-7-5]
Length = 318
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/277 (16%), Positives = 110/277 (39%), Gaps = 10/277 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFG 68
++ D + ++ D + +++ ++ A+LS+ +V N+ G + G ++ +
Sbjct: 24 RLMVDTYKKWMASDPFKLSAIVAYYAILSLPALVVIILNIVGAVWGRDIVQGELLAEITK 83
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ A+ I ++ T+ L Y ++ L+ +L+ + V
Sbjct: 84 VLGQETAESIRLMMVDRGDEETGFFTATVGILVLLYGATGVFFQLQQALDTIWGVNLNEQ 143
Query: 128 -----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+R FG++L+ L+I + + +F PA +L+ I+ I
Sbjct: 144 DGILNIIKSRAKGFGFILIIGFLLLISFIATSLLSAFSNRLAEFLPA--SLIEFIFIIDI 201
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+++ +++ + FLP+ + ++ G T I +++G V +Y T + Y
Sbjct: 202 AISLIVIYMLFAALFKFLPSVYVRWKAVRVGAGLTTILFILGEVAMAYYFNTM-EPGSTY 260
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
SI+ ++++ + GA Y+ +
Sbjct: 261 GAAGSIILIMLWVSYSSLILFFGANFTRVYADAYYNE 297
>gi|257056430|ref|YP_003134262.1| hypothetical protein Svir_24410 [Saccharomonospora viridis DSM
43017]
gi|256586302|gb|ACU97435.1| predicted membrane protein [Saccharomonospora viridis DSM 43017]
Length = 402
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 1/205 (0%)
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I + +L + ++ L + + S+ + + ++ A+ +R+ R+
Sbjct: 101 QQIIAPTVDDILTTGKGEIVSVGFLISLWAGSSAMSSFVDAITVAHDQYGVRNEVWQRIF 160
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + V LVI + P L + + + L + L
Sbjct: 161 ALLLYLGSLVLLVIGLPIIAIGPDLLPEFFPD-DWKPTIASWLSVLYYPTVAVLLVLALA 219
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ K LPG + + +++ +V YI +T Y LA+ + L+F
Sbjct: 220 TLYKLALPRKLPWHRGLPGAVLAMVIFLLSSVGLRFYISWITTTGYTYGALATPIAFLLF 279
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
+ +G+ + GA N+++ + K
Sbjct: 280 TFFIGLAIVAGAYFNSAIQELWPAK 304
>gi|307330671|ref|ZP_07609809.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
gi|306883650|gb|EFN14698.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
Length = 347
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/263 (12%), Positives = 93/263 (35%), Gaps = 8/263 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + E +A+ I+ ++ ++ FP I GA + + + +
Sbjct: 19 WLTRTHAWRTYERLDRVHWTRLAAAITFTSFIAFFPLIAVGAAIGAATLSQAQMAQLQKK 78
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + ++Q A + ++A+ + + V +LR L + + E
Sbjct: 79 IAQQIPGISGQLDLGALVQ----NAATIGVVAAVLLLFTGISWVGSLRECLRAVWELEED 134
Query: 126 R-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI 182
+ + ++ ++ ++ V A+ + + N + ++
Sbjct: 135 PGNPLVRKVKDAFVLIGLGGVALVSFAVSALAATAVGRIARLIGIPENGIGGWLLRIAAF 194
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ A + L +V +LP + +++ + I + + VL + Y+ + S MY
Sbjct: 195 AIAVCADLVLLSYVLTWLPGVQPPRRTVVVAALIGAIGFELLKVLLSSYLKDVAAKS-MY 253
Query: 243 AGLASIMTCLVFLYMLGVFFILG 265
+ L+++ +
Sbjct: 254 GAFGVPIALLLWMNFTAKLTLYC 276
>gi|256844588|ref|ZP_05550073.1| methionine aminopeptidase Map [Lactobacillus crispatus 125-2-CHN]
gi|293379910|ref|ZP_06626020.1| YihY family protein [Lactobacillus crispatus 214-1]
gi|256613129|gb|EEU18333.1| methionine aminopeptidase Map [Lactobacillus crispatus 125-2-CHN]
gi|290923530|gb|EFE00423.1| YihY family protein [Lactobacillus crispatus 214-1]
Length = 307
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/264 (22%), Positives = 117/264 (44%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + +A + I+ L S+FP I+ N+ + + + +P+ ++K I
Sbjct: 23 LSQGEIFASSIIIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAEYLNLVFPDQVSKFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENRLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+F + L + I + V L ++ F N + I++ R +L + +
Sbjct: 141 TITFIFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPVLILVMMLA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L +++ LP K K I PGV T + W+ + LF+ Y+ F Y + + + +
Sbjct: 201 LWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + V F+ G +NA+++
Sbjct: 261 LWLNIAAVLFLFGVGVNAAIVRNR 284
>gi|297201893|ref|ZP_06919290.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
gi|197712734|gb|EDY56768.1| ribonuclease BN family membrane protein [Streptomyces sviceus ATCC
29083]
Length = 303
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/264 (12%), Positives = 97/264 (36%), Gaps = 8/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ ++ ++ +++FP + A +A + + + + +
Sbjct: 21 HAWRSYERLDRVKWTRLAAAMTFTSFVALFPLLTVAAAIAAATLSTKQQNDLQNKIADQV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + D+++Q A + I+A A + N ++R L + + + +
Sbjct: 81 PGISDQLNIDDLVQ----NAGTVGLIAAAALLFTGINWAGSMRECLRAVWELPDDDENAV 136
Query: 131 -TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATML 187
+ G +L +++ + + + ++ +L
Sbjct: 137 LRKGKDLGILLGLGGAVLVTLAISTVASALVDRIGGELGLQEGSAGRVLLRIAAFGIAVL 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L++V LP + + + + + + + +L + Y+ +T S MY
Sbjct: 197 ADFLLLLYVLTLLPGVEPRRRRLFVAALTGAVGFELLKLLLSGYMQGVATKS-MYGAFGV 255
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 256 PVALLLWINFTAKLVLFCAAWTAT 279
>gi|226305498|ref|YP_002765458.1| hypothetical protein RER_20110 [Rhodococcus erythropolis PR4]
gi|226184615|dbj|BAH32719.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 349
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 97/276 (35%), Gaps = 8/276 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
+ D + A F E+ G A+ I+ ++L++ P ++ +AGF+ G +++
Sbjct: 20 QRAARPWLDHLVRAAGRFQEQKGDYYAAGITYFSVLALIPIMMVAFAVAGFVLAGHPEYL 79
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + + + P + I I + + L AAY + +R +L
Sbjct: 80 ESIQEQITKSIPGSLGDTINTLIDSAID-SRASVGIFGLLGAAYAGLGWMANVRDALTAM 138
Query: 120 YRVVEMRSWYIT----RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ ++ + + LA V + MS + + + +
Sbjct: 139 WESKREPKGFVRTKLGDAGALIGLALAMVVSLGMSALSSGPVATQIVKWLNLENITGVGV 198
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + ++LA + ++V LP + S + + + + + Y+
Sbjct: 199 GLRVVSLLLSLLATWAVFLWVIARLPREPVTLRSAAQAALIAAVVFEIFKQVGAIYLAAV 258
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
++ I+ LVF++ + A+
Sbjct: 259 TS-GPAGVAFGPIIGLLVFVFTASRMLLFCTAWAAT 293
>gi|218289811|ref|ZP_03494011.1| ribonuclease BN [Alicyclobacillus acidocaldarius LAA1]
gi|218240102|gb|EED07287.1| ribonuclease BN [Alicyclobacillus acidocaldarius LAA1]
Length = 285
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 114/270 (42%), Gaps = 3/270 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
MR + + D ++A+ I+ A+ S+ P ++ A + V
Sbjct: 1 MRSRVQQAQAFARKLGANCMAHDITSLAAQIAFYAMFSLLPLLILVMYGASLVVPHRIIV 60
Query: 60 PTVIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V+ + +P+ A + + L L+ +S ++ A+ +++ + A++ +L+R
Sbjct: 61 EMVLGALRPYYPDLQNANQMLENSLNKLSDIGARAGLVSFISLAWSATSALIAVQQALDR 120
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V RS+ R I+ +++ + V+ +F P + ++ +
Sbjct: 121 IFEVDVPRSFLARRAIAALFLVALVILAVVSAFAMALYPWVVHHIPAGTWFVTAFTRFSG 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R+ L+LF+ V+ +LP+ + + G + + + +LF Y TY
Sbjct: 181 VTRMLYP-LSLFVTCFVVYRYLPSRRVNPNCTILGALAATVLLDLARLLFVVYAAHAVTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y GL ++ + ++Y+ + +LGAE+
Sbjct: 240 HAVYGGLTVVILLIFWMYIALIILLLGAEI 269
>gi|227877143|ref|ZP_03995217.1| possible ribonuclease BN [Lactobacillus crispatus JV-V01]
gi|256848992|ref|ZP_05554426.1| methionine aminopeptidase Map [Lactobacillus crispatus MV-1A-US]
gi|227863197|gb|EEJ70642.1| possible ribonuclease BN [Lactobacillus crispatus JV-V01]
gi|256714531|gb|EEU29518.1| methionine aminopeptidase Map [Lactobacillus crispatus MV-1A-US]
Length = 307
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 58/264 (21%), Positives = 117/264 (44%), Gaps = 8/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + +A + I+ L S+FP I+ N+ + + + +P+ ++K I
Sbjct: 23 LSQGEIFASSIIIAYYILFSIFPIIIIIGNVLPLFHID--TAPIAEYLNLVFPDQVSKFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ N+ Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIVFAVWSLSNMVNAIRLGENKLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I+F + L + I + V L ++ F N + I++ R +L + +
Sbjct: 141 TITFVFTGLMILVFTIATLALVFGQQVLNFLGPIFQLPLNEISKIFSYRYPVLILVMMLA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
L +++ LP K K I PGV T + W+ + LF+ Y+ F Y + + + +
Sbjct: 201 LWYLNYVLPNIKLKKRVIWPGVFVTVVGWLALSFLFSFYLHHFPITWENYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFILGAELNASMIIYY 276
++L + V F+ G +NA+++
Sbjct: 261 LWLNIAAVLFLFGVGVNAAIVRNR 284
>gi|92113961|ref|YP_573889.1| ribonuclease BN, putative [Chromohalobacter salexigens DSM 3043]
gi|91797051|gb|ABE59190.1| ribonuclease BN, putative [Chromohalobacter salexigens DSM 3043]
Length = 301
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 36/266 (13%), Positives = 91/266 (34%), Gaps = 6/266 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFGAWPEVIAKP 77
++E + ++ A ++ L S+ P I+ + G + G ++ + + A
Sbjct: 2 WLEHNAFSYAGSLAFYTLFSLAPTIIIAVTVIGLILGEEAAQGQIVAQLQDTMGQDAAMA 61
Query: 78 ITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI-- 134
+ + Q + L + A ++ ++ SLN + V L
Sbjct: 62 VQQAVAQSRLESSGLLPTLLGIGALVVGATTVFAQMQFSLNTLWGVTARPDRNSVLLFIK 121
Query: 135 -SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + I+ V L A+ + + ++ ++ + +
Sbjct: 122 QRMLSLTVVLAVGFILMVSLVLGVLLRAFFMYASDWVPGVNALLGGAEFIVSLAVIALFF 181
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ LP ++ G I T + + +G Y+ +T S Y S++ L+
Sbjct: 182 AAIFKVLPDVVVSWRDVMVGAIVTAVLFAIGRYGIAAYLAYTATAS-TYGAAGSVVLILL 240
Query: 254 FLYMLGVFFILGAELNASMIIYYWRK 279
++Y + + GA + + ++
Sbjct: 241 WVYYSSLILLYGAAFTRTHLEARGKR 266
>gi|15827490|ref|NP_301753.1| integral membrane protein [Mycobacterium leprae TN]
gi|221229967|ref|YP_002503383.1| hypothetical protein MLBr_01017 [Mycobacterium leprae Br4923]
gi|699178|gb|AAA62943.1| u1764d [Mycobacterium leprae]
gi|13093040|emb|CAC31398.1| possible conserved integral membrane protein [Mycobacterium leprae]
gi|219933074|emb|CAR71112.1| possible conserved integral membrane protein [Mycobacterium leprae
Br4923]
Length = 330
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 104/277 (37%), Gaps = 13/277 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN----LAGFLGAHQFVPTVI 63
++ I + ++ ++ ++ + + LS+ P ++ +A G
Sbjct: 13 IWRISLRTLSKSWDDSIFSESAQAAFWSALSLPPLVLGMLGSLAYVAPLFGEDTLPTIER 72
Query: 64 DVVFGAW----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V+ A P V+ + I I V + ++ L + + S+ + A ++ +A
Sbjct: 73 RVISMAHSFFSPSVVNEIIEPTISDVNNGARGEVVSLGFLISLWAGSSAISAFVDAVVKA 132
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R RL + + +V + + V P + + + ++
Sbjct: 133 HDQTLLRHPVKQRLFALFLYIAMLAFVVATAPLVVVGPRKVTKL-----IPHSWANMLHL 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A +++L + ++ ++ ++ G I +V+ + Y+ +
Sbjct: 188 GYYPAVIVSLLVAVMILYRVALPIPLPTHRLVFGAILATAVFVITTLGLRIYLKWITGTG 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L + + L+F + G +LGAE NAS+ +
Sbjct: 248 YTYGALTTPIAFLLFAFFGGFAIMLGAEFNASIQEKF 284
>gi|227487926|ref|ZP_03918242.1| tRNA-processing ribonuclease BN [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227542567|ref|ZP_03972616.1| tRNA-processing ribonuclease BN [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092132|gb|EEI27444.1| tRNA-processing ribonuclease BN [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227181765|gb|EEI62737.1| tRNA-processing ribonuclease BN [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 383
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/284 (16%), Positives = 102/284 (35%), Gaps = 18/284 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV---IDVVF 67
++ F+ + A+ ++ L+ P ++ ++A + A + +
Sbjct: 54 VLRRTWSDFILDAIMDRAAVLAFFMFLTAAPTVLAAYSIATLIFARNERQVTNLTQEAIA 113
Query: 68 GAWPEVIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P IA + + ++ A ++ L A + SS V A S N Y VE
Sbjct: 114 KYVPSEIADHVRAVVDVIVGSAAEGTWALVLAVLIALFSSSAWVRAFARSANFIYGRVEG 173
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALGNLL 174
R+ T L +G L + VI+ + + V + G L
Sbjct: 174 RTVIPTWLTMWGITFLMVIGAVIIVGALLLRQSVVLAVFEPIADPLGLVEELDFLTGIFL 233
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I RI L + ++ F P + + G + ++ + L Y+
Sbjct: 234 PIWVWIRIPVIALIALTLVAVLYYFAPNVRPQHFRWLTVGSAVSVVTIGITWWLLGLYLQ 293
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F+ S+ Y + +I+ + +++ + ++G +L+A ++
Sbjct: 294 FFAG-SSAYGAIGTIIAVIFACWIMNILLLIGIKLDAEVLRAKE 336
>gi|282932763|ref|ZP_06338169.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|297206340|ref|ZP_06923735.1| possible ribonuclease BN [Lactobacillus jensenii JV-V16]
gi|281303119|gb|EFA95315.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|297149466|gb|EFH29764.1| possible ribonuclease BN [Lactobacillus jensenii JV-V16]
Length = 286
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + I+ L S+FP I+ N+ V + +
Sbjct: 7 WRQFFKIFSKRMSRGEINQGSIVIAYYLLFSMFPIIIIAGNIMPLFHLKP--EVVEEYLI 64
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +A I + VL + G + L A + S+ A+RIS+NR Y V +
Sbjct: 65 YGLPTKVADFIMPIVKSVLQKQSTGYISFGILIALWSFSSLTNAMRISMNRIYGVRQQEL 124
Query: 128 WYITRLISF------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ L + L +++ L V+ F + I+ +
Sbjct: 125 RFSFGRKLLERGVVVLITGLMIILLTVLTIALTFGQEILDSVKAFLGINYLGIESIFTYK 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + + + + LP K + +I PGV + W + LF Y+ F
Sbjct: 185 WLVLLAVMLVVIAYFNFALPNVKKRKRAIWPGVFINLVGWSGLSYLFGLYLSHFKLSFEN 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y + + + +++L + + F+LG +NA++
Sbjct: 245 YGIVGTFIIFMLWLNLSSLLFLLGVCVNATIDELK 279
>gi|319442899|ref|ZP_07992055.1| hypothetical protein CvarD4_14169 [Corynebacterium variabile DSM
44702]
Length = 371
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 96/272 (35%), Gaps = 8/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI--VFGANLAGFLGAHQFVPTVI 63
D + + + E+ G A+ I+ ++LS+FP I V G + +I
Sbjct: 34 WPWLDHVMHMNDRYGEQGGNYYAAGITYFSVLSIFPLIMLVVAVVAMVLAGNEDLLNDII 93
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + + + +TD + + +F I + + + LR ++ ++
Sbjct: 94 DDIKDSASGDLGDTLTDILNTAIG-QRGSIFGIGLVLTLWTGLGWIGNLRAGISAMWKAD 152
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV----RKFFPALGNLLLIIWN 179
+I IS L+ + + ++F AI + + + +W
Sbjct: 153 LTSDNFIKGKISDLIALIGLLLALGVAFAVTAIGSGGFTWTIIETLNLDNITGIRVFVWI 212
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++A ++ + ++ +F P + + G + I F + +
Sbjct: 213 IALLIALVANWVVMFWMLMFFPRTHVPRKAAVRGAVIGAIGLEFFKQ-FATVFFNNTMSN 271
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ +V LY+L + + A+
Sbjct: 272 PAGAAFGPIIGVMVLLYLLWRITLYCSAWVAT 303
>gi|148992234|ref|ZP_01821957.1| ribonuclease BN, putative [Streptococcus pneumoniae SP9-BS68]
gi|168488338|ref|ZP_02712537.1| ribonuclease BN [Streptococcus pneumoniae SP195]
gi|221231473|ref|YP_002510625.1| ribonuclease BN-like family protein [Streptococcus pneumoniae ATCC
700669]
gi|225854183|ref|YP_002735695.1| ribonuclease BN [Streptococcus pneumoniae JJA]
gi|298230973|ref|ZP_06964654.1| ribonuclease BN [Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254128|ref|ZP_06977714.1| ribonuclease BN [Streptococcus pneumoniae str. Canada MDR_19A]
gi|147928860|gb|EDK79872.1| ribonuclease BN, putative [Streptococcus pneumoniae SP9-BS68]
gi|183572912|gb|EDT93440.1| ribonuclease BN [Streptococcus pneumoniae SP195]
gi|220673933|emb|CAR68442.1| ribonuclease BN-like family protein [Streptococcus pneumoniae ATCC
700669]
gi|225723978|gb|ACO19831.1| ribonuclease BN [Streptococcus pneumoniae JJA]
gi|332074462|gb|EGI84938.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA17570]
Length = 286
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 117/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLCFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNISNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLRDP 281
>gi|16331859|ref|NP_442587.1| serum resistance locus; BrkB [Synechocystis sp. PCC 6803]
gi|1208489|dbj|BAA10657.1| serum resistance locus; BrkB [Synechocystis sp. PCC 6803]
Length = 318
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/291 (14%), Positives = 102/291 (35%), Gaps = 18/291 (6%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVID 64
+ +I + +++ M + ++ AL S+FP + ++AG L + +I
Sbjct: 23 RISQLILQTFLKWQKDNCMDMGAALAYYALFSLFPICLVMLSIAGRLLGADSNYYLQLIS 82
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
PE K + + + I +S +AL S+ + + VV
Sbjct: 83 FAQNILPEQPFKVFQQALTNL-NQSSFSAGLIGFGILVLTASRIFDALNQSVKKIWSVVH 141
Query: 125 M---------------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
R+ + L+ V++ +++ + + + + +
Sbjct: 142 QPKENIGVKHHAFNFIRNKILAFLLVLSTVMVFLLSIFANLAAKIFLTVLAEFGQSIPWV 201
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ L +I + + + + +I + LP + + I PG I T + +
Sbjct: 202 TFDSLGLITTLQTSISYFLITVVIITLFKVLPPVRLQWWDIFPGAILTAATMMALQNAVG 261
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ Y + ++M L+++Y++ F +G E + +
Sbjct: 262 SGIIRIGENLQAYGVVGNVMVLLLWIYLIFQVFFIGCEFTFVFTYIFGSRH 312
>gi|15902618|ref|NP_358168.1| ribonuclease BN, putative [Streptococcus pneumoniae R6]
gi|15458153|gb|AAK99378.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
Length = 291
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 117/281 (41%), Gaps = 7/281 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 6 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 63
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 64 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNK 123
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S F+ + + LA + ++ G + +
Sbjct: 124 AYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 183
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 184 GLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVH 243
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ L S+ + + + ++ ILGA +NASM
Sbjct: 244 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLK 284
>gi|227548227|ref|ZP_03978276.1| ribonuclease BN [Corynebacterium lipophiloflavum DSM 44291]
gi|227079701|gb|EEI17664.1| ribonuclease BN [Corynebacterium lipophiloflavum DSM 44291]
Length = 377
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/282 (16%), Positives = 101/282 (35%), Gaps = 18/282 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVFGA 69
+ F + A+ ++ A+LS+ P ++ ++A L + ++V
Sbjct: 54 KRVVMDFGMDAMVDRAAALTYYAVLSLAPTVLALYSIAVLLLPRDKEAVAELLAELVAMY 113
Query: 70 WPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P+ + + V+ P++ +S L + +S V + + N Y VE R
Sbjct: 114 VPKELRSDALAFLQNVVGSPSQSTVALIVSVLVSLLSASAYVRSFSRNANVIYGRVEGRR 173
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-----------ALGNLLLI 176
+ L + ++ V++ F + + V + L +
Sbjct: 174 LPVIWLTMWLLTIVLVAGAVLLIFASLLRESLVTGVMRPIAEPLGLTQTVEYLTQIFLPV 233
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
RI + + + ++ F P + + + G F + V LF Y+ T
Sbjct: 234 WGWVRIPVMVAVSVLLVALLYYFSPNVRPGRFRLLTLGSFFALLVVGVVWALFGLYLSTI 293
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S Y I+ LV L+ + + +LG +++A ++
Sbjct: 294 GVRSA-YGAFGIILALLVVLWAMNIVLLLGLKIDAEVLRAKE 334
>gi|315037851|ref|YP_004031419.1| hypothetical protein LA2_03230 [Lactobacillus amylovorus GRL 1112]
gi|325956325|ref|YP_004291737.1| hypothetical protein LAC30SC_03130 [Lactobacillus acidophilus 30SC]
gi|312275984|gb|ADQ58624.1| hypothetical protein LA2_03230 [Lactobacillus amylovorus GRL 1112]
gi|325332890|gb|ADZ06798.1| hypothetical protein LAC30SC_03130 [Lactobacillus acidophilus 30SC]
gi|327183144|gb|AEA31591.1| hypothetical protein LAB52_03085 [Lactobacillus amylovorus GRL
1118]
Length = 305
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/224 (21%), Positives = 102/224 (45%), Gaps = 6/224 (2%)
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + +P+ I+K I I +L + G + + A + S+ V A+R+ NR Y
Sbjct: 63 IANYLDFVFPDQISKYIMPIINSLLKTTSTGYMSFGIVLAVWSFSSLVNAIRLGENRLYG 122
Query: 122 VVEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
V ++ ++ TR+I+ + L + + V L ++ F +
Sbjct: 123 VRQIELKLSIVNFLWTRMITIAFTTLMIILFTGATLALVFGQQLLHFLSPIFQLPVEEID 182
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I++ R +L + + + +++ LP K K I PGVI T I W+ + LF+ Y+ F
Sbjct: 183 KIFSYRYPVVLLMMILAVYYLNYVLPNIKLKKRVIWPGVIVTVIGWLALSFLFSFYLHHF 242
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y + + + +++L + + F+LG +NA+++ +
Sbjct: 243 PITWENYGIIGTFIIFMLWLNIAAILFLLGVGVNATIVHNREGE 286
>gi|289642410|ref|ZP_06474556.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
gi|289507755|gb|EFD28708.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
Length = 299
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/233 (18%), Positives = 92/233 (39%), Gaps = 2/233 (0%)
Query: 50 AGFLGAHQFVPTVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG 108
G ++++ P V+ + I ++L + +I L + + S+
Sbjct: 52 VGADAVDSVRQSLLNTANDLLTPSVVDDVVRPTINEILTHGRPDVISIGFLLSLWTGSSA 111
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ ++ AY +RS +RL++ L V+ VI+ V P ++ +
Sbjct: 112 MATYVNTITIAYGQRRLRSAVRSRLLALRLYLAQVVSGVILLPALVLGPDLISELLD-AD 170
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
+ ++ L L ++ ++ LPG + + W VG+ L
Sbjct: 171 RHHLVDWLLTVLFWPVVALLSLTMLTSLYHLSLPSRRPWRRALPGALLAMVVWNVGSYLL 230
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y+ T + +Y +A+ + L+F Y+ + +LGAELNA++ + P
Sbjct: 231 RLYLGTVIDHELIYGSVAAPVAALLFFYITALAVLLGAELNAAIDEHSGHTPP 283
>gi|88703888|ref|ZP_01101603.1| conserved hypothetical protein, Ribonuclease BN-like family protein
[Congregibacter litoralis KT71]
gi|88701715|gb|EAQ98819.1| conserved hypothetical protein, Ribonuclease BN-like family protein
[Congregibacter litoralis KT71]
Length = 308
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/276 (17%), Positives = 102/276 (36%), Gaps = 12/276 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++ ++ DA E++++ + +A A ++ + S+ P ++ ++ G +
Sbjct: 5 LKVGLKRWTTVLRDAGEYWLDSNAFANAGALAFFTIFSMAPMMIMIVSVVGVFYGQETAQ 64
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI--SALAAAYFSSNGVEALRISLNR 118
I A A +E + GLF A ++ ++ SLN
Sbjct: 65 GEIAAKIQAAVGSKAAEAVEEAIARARDQEDGLFATLSGLGAMLIGATTVFGQMQDSLNA 124
Query: 119 AYRVVEM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+ V RL S VL +++ + V + + L ++++ P
Sbjct: 125 IFGVAPKPSRSGVWLLIRKRLTSLTIVLAVGFVMLVSLSLSVVLRVVLQSMQEWIPWHDA 184
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ G A LF + LP K ++L G + T + VG VL Y+
Sbjct: 185 AFSALDTGLSLAVAALLFGT---IIKTLPDVKLSWRNVLLGSLLTAAMFTVGRVLIALYL 241
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+T ++ Y S++ L+++ + + GA
Sbjct: 242 SVTAT-ASTYGAAGSLVLLLLWVNYSSLILLYGAAF 276
>gi|229491263|ref|ZP_04385089.1| ribonuclease BN [Rhodococcus erythropolis SK121]
gi|229321802|gb|EEN87597.1| ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 420
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 102/278 (36%), Gaps = 9/278 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVV 66
+I + ++ + A+ + LS+ P ++ + G++G V + +
Sbjct: 27 QLIGRTLSKAWDDSIFGKAATAAFWQTLSLAPLLLGLLGMIGYIGGWFGPNTVEIIESKI 86
Query: 67 FGAWPEVIAK-----PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ I + VL + ++ L + + S+ + S+ A+
Sbjct: 87 VTFSGTIFSESVVDQIIRPTVTDVLQRGRPEIISVGFLLSLWAGSSAISTFVDSIVEAHG 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R+ R+ + ++ V V + + P + ++
Sbjct: 147 QQDARNPIWQRIFALLLYVMFLVMAVFILPLVALGPTLVGRALP-ASWYVVGSNLVDTFY 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L + IGL ++ +L G + + ++ + Y+ ++
Sbjct: 206 YPAVGLLVIIGLTTLYKVALPKSLPWHRLLAGALVAGVFFMAASTGLRWYLGFVTSTGYT 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+F + LG +LGAE NA++ ++ +
Sbjct: 266 YGALATPIAFLLFTFFLGFAVVLGAEFNATVQEFWPAR 303
>gi|298252235|ref|ZP_06976038.1| ribonuclease BN [Ktedonobacter racemifer DSM 44963]
gi|297546827|gb|EFH80695.1| ribonuclease BN [Ktedonobacter racemifer DSM 44963]
Length = 414
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 99/271 (36%), Gaps = 13/271 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFG 68
+ + F + +A ++ + L+S+ P + + GF LG +I+
Sbjct: 31 KTFREFLTKFNNDWSSGLAGLLAYNILMSIVPIAIALIAILGFALGGVTDTQQLINQATS 90
Query: 69 AWP-EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P K + L A L I+ + A + SN + L+ Y V R
Sbjct: 91 FFPIAGSNKAALSLAITQLQKNAGWLTIIAVVLALFNGSNLFVTIENCLDIVYHV-RPRP 149
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--------FFPALGNLLLIIWN 179
RL++ G VL+ + IM F L L ++ F + ++ +
Sbjct: 150 MIRQRLVAIGMVLIFVFLIPIMVFASSLPTLILGLLQNNPALKSIPFVSTIAANPVLSYL 209
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++L FI +++ +P + G + I+ + LF Y F +
Sbjct: 210 AGFGGSILVGFILFEAIYVIVPNQHISWKNSWKGALGASIALALFLALFPIY-ARFGLGN 268
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ + L+F Y + ++G E+NA
Sbjct: 269 YT-GQVGFAIIFLIFFYYFAMILMIGGEINA 298
>gi|317125026|ref|YP_004099138.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
gi|315589114|gb|ADU48411.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
Length = 366
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 104/270 (38%), Gaps = 14/270 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF-- 67
+ + I + +A+ LLS+ PF++ G+LG +V ++
Sbjct: 21 RLTLETIRVCLNYRVTGLAAEGGFFLLLSLPPFVLGLFGGVGYLGNILGADSVERLLAVI 80
Query: 68 ------GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I + + + VL L ++ L A + S + +++ Y
Sbjct: 81 TDYASGFLTQGSIEELLLPTVRDVLRDGRPDLISVGFLLALWSGSRALNVFVDTISIMYG 140
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R R ++FG + V V++ + + P + L + L ++ +
Sbjct: 141 QGDSRGILRQRFLTFGLYTVGIVVAVVLLPLVLLGPAIIE------GWLPDRLKLLTSAY 194
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L + + + +PG + W++ +++ + S++
Sbjct: 195 WPLVLVLSIALLTTLFHIATPRRGRWWRNVPGALLALAIWLLASLVVRSALEASLGGSSI 254
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y L++ + L++LY+L + ++GA LNA+
Sbjct: 255 YGPLSTPIVLLIWLYVLAIAILIGAGLNAA 284
>gi|256851526|ref|ZP_05556915.1| methionine aminopeptidase Map [Lactobacillus jensenii 27-2-CHN]
gi|260660949|ref|ZP_05861864.1| methionine aminopeptidase Map [Lactobacillus jensenii 115-3-CHN]
gi|256616588|gb|EEU21776.1| methionine aminopeptidase Map [Lactobacillus jensenii 27-2-CHN]
gi|260548671|gb|EEX24646.1| methionine aminopeptidase Map [Lactobacillus jensenii 115-3-CHN]
Length = 286
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 100/275 (36%), Gaps = 8/275 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + I+ L S+FP I+ N+ V + +
Sbjct: 7 WRQFFKIFSKRMSRGEINQGSIVIAYYLLFSMFPIIIIAGNIMPLFHLKP--EVVEEYLI 64
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +A I + VL + G + L A + S+ A+RIS+NR Y V +
Sbjct: 65 YGLPTKVADFIMPIVKSVLQKQSTGYISFGILIALWSFSSLTNAMRISMNRIYGVRQQEL 124
Query: 128 WYITRLISF------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ L + L +++ L V+ F + I+ +
Sbjct: 125 RFSFGRKLLERGVVVLITGLMIILLTVLTIALTFGQEILDSVKAFLGINYLGIESIFTYK 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + + + + LP K + +I PGV + W + LF Y+ F
Sbjct: 185 WLVLLAVMLVVIAYFNFALPNVKKRKRAIWPGVFINLVGWAGLSYLFGLYLSHFKLSFEN 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y + + + +++L + + F+LG +NA++
Sbjct: 245 YGIVGTFIIFMLWLNLSSLLFLLGVCVNATIDELK 279
>gi|294632085|ref|ZP_06710645.1| integral membrane protein [Streptomyces sp. e14]
gi|292835418|gb|EFF93767.1| integral membrane protein [Streptomyces sp. e14]
Length = 349
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 79/199 (39%), Gaps = 6/199 (3%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + V+ + +I + A + S V ++ Y + +R TRL++
Sbjct: 65 EITQPILKDVMQGGRPDVISIGFVFALWSGSRAVNVFIDTITVMYGLDGVRGIVKTRLMA 124
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
F ++ + + + VA P A+ V + ++ ++ L
Sbjct: 125 FALFVVGLLIGSVALPLMVAGPDAVVRVVPW------STTVVQVLYWPVVIVLSIAFLTT 178
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +S + +PG + WVV + L Y+ + T+Y LA+ + L+++
Sbjct: 179 LYHVSVPVRSPWIEDVPGALVALAMWVVCSFLLRIYLTSTVEGPTIYGSLAAPVAVLLWI 238
Query: 256 YMLGVFFILGAELNASMII 274
+ ++GA +NA++
Sbjct: 239 GVSAFAVLVGAAVNAAIDR 257
>gi|194398139|ref|YP_002037313.1| ribonuclease BN [Streptococcus pneumoniae G54]
gi|194357806|gb|ACF56254.1| ribonuclease BN, putative [Streptococcus pneumoniae G54]
Length = 286
Score = 97.8 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 117/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNISNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 281
>gi|293605881|ref|ZP_06688251.1| serum resistance protein [Achromobacter piechaudii ATCC 43553]
gi|292815668|gb|EFF74779.1| serum resistance protein [Achromobacter piechaudii ATCC 43553]
Length = 293
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/282 (17%), Positives = 109/282 (38%), Gaps = 11/282 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVI 63
++ ++ + +++++ +M + I+ + S+ P ++ +AGF G +
Sbjct: 3 IKRLYALVKQTVMNWLDDYAPSMGAAIAFYTVFSLAPLVIIVIGIAGFFWGHEAAQGQLF 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + K + +L IS + S+ L+ +L+R ++V
Sbjct: 63 EQISALVGAEGGKAVESVVLGAQEPAQGIAATVISVVMLVIGSTTVFSELQSALDRIWKV 122
Query: 123 VEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ RL+SFG +L + L++ V + +++ P G LL +
Sbjct: 123 NAKKQSGIWALIRARLLSFGLILTLAFLLIVSLIVSTVLAALGSWLGGGDPGWGLLLQAV 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
T+ L + ++ F+P A + G T + + +G L Y+ S
Sbjct: 183 NEA---VTVGILTLLFGMIYRFMPQAPVAWRDVWAGAFVTAVLFEIGKFLIGLYMAKASI 239
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S+ A S++ L+++Y F+LGAE +
Sbjct: 240 ASSY-AAAGSLVVVLIWVYFAAQVFLLGAEFTRVFAEAHRSH 280
>gi|258651531|ref|YP_003200687.1| ribonuclease [Nakamurella multipartita DSM 44233]
gi|258554756|gb|ACV77698.1| ribonuclease [Nakamurella multipartita DSM 44233]
Length = 361
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 99/274 (36%), Gaps = 13/274 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
+ AI + + G A ++ + LS+ P ++ G ++ G + + + + +
Sbjct: 38 KHLIAAITRYGDRLGSQFAGAMTYFSFLSLVPILMVGFSVGGIVLRNNQELLARLESEIA 97
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR- 126
P+ IA PI I V+A P G+ + L A Y + LR ++ +
Sbjct: 98 AMLPKEIADPIVALIDSVVANP-LGVGIVGLLIALYSGIGWMGNLRKAVRALWGKQFETG 156
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLLIIWN 179
+ + L G + +V +V+ + + V L+ ++
Sbjct: 157 KATADNLVVGTLKDLGALAGLAVAIVVSLGLSAVGSQFASAVADLLGLGDQAWLVPVLTV 216
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSK--IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
I M A + ++V+ LP + + L G I I + + T + F+
Sbjct: 217 TTILIAMAADVLIFMWVYTVLPPKSQRSSFKARLRGSIVAAIGFEILKYALTTILPAFTG 276
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A ++ L F ++ + A A+
Sbjct: 277 TSRTAAIFGPVIGLLFFFNLVAQLVLFVAAWVAT 310
>gi|225856351|ref|YP_002737862.1| ribonuclease BN [Streptococcus pneumoniae P1031]
gi|225724776|gb|ACO20628.1| ribonuclease BN [Streptococcus pneumoniae P1031]
Length = 286
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 117/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLCFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNISNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 281
>gi|300781637|ref|ZP_07091491.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
gi|300533344|gb|EFK54405.1| conserved hypothetical protein [Corynebacterium genitalium ATCC
33030]
Length = 400
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/293 (17%), Positives = 101/293 (34%), Gaps = 18/293 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQF 58
R + +I + F + ++ + ++ P ++ +L +
Sbjct: 48 RLSWKGWKLVIARTVLDFGPIALMDRGATLTYFTITAMAPTLLAFYSLVTLMFPSDKDDL 107
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAV--PAKGLFTISALAAAYFSSNGVEALRISL 116
+ V+ PE + + D +L V + IS L + + SS V A S
Sbjct: 108 REFMGGVIEDTVPEELREQALDLLLNVAGTPEQSTVAIIISLLVSLFSSSAYVRAFSRSC 167
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP-------- 168
N Y E RS +T L +G +L + VIM V + V
Sbjct: 168 NVIYTRTEGRSLPVTWLTMWGITVLMVLGGVIMVAGVVLRTSIVDAVLGPIAEPLRLQGV 227
Query: 169 ---ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVG 224
+ + R +LA + ++ F P + + + G + +
Sbjct: 228 VDYLNQIFIPVWNWLRYPVVILAAIALVSCLYYFAPNVRPGRFRLLTVGSALALVVIGLL 287
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
LF ++ F + Y S++ LV ++ + + +LG +L+A ++
Sbjct: 288 WALFNWFVSNFG-LQSAYGAFGSVLAMLVMVWAMNIVLLLGVKLDAEILRAKE 339
>gi|226306295|ref|YP_002766255.1| hypothetical protein RER_28080 [Rhodococcus erythropolis PR4]
gi|226185412|dbj|BAH33516.1| conserved hypothetical membrane protein [Rhodococcus erythropolis
PR4]
Length = 415
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/278 (14%), Positives = 102/278 (36%), Gaps = 9/278 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVV 66
+I + ++ + A+ + LS+ P ++ + G++G V + +
Sbjct: 27 QLIGRTLSKAWDDSIFGKAATAAFWQTLSLAPLLLGLLGMIGYIGGWFGPNTVEIIESKI 86
Query: 67 FGAWPEVIAK-----PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ I + VL + ++ L + + S+ + S+ A+
Sbjct: 87 VTFSGTIFSESVVDQIIRPTVTDVLQRGRPEIISVGFLLSLWAGSSAISTFVDSIVEAHG 146
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R+ R+ + ++ V V + + P + ++
Sbjct: 147 QQDARNPIWQRIFALLLYVMFLVMAVFILPLVALGPTLVGRALP-ASWYVVGSNLVDTFY 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L + IGL ++ +L G + + ++ + Y+ ++
Sbjct: 206 YPAVGLLVIIGLTTLYKVALPKSLPWHRLLAGALVAGVFFMAASTGLRWYLGFVTSTGYT 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+F + LG +LGAE NA++ ++ +
Sbjct: 266 YGALATPIAFLLFTFFLGFAVVLGAEFNATVQEFWPAR 303
>gi|108797332|ref|YP_637529.1| ribonuclease BN [Mycobacterium sp. MCS]
gi|119866417|ref|YP_936369.1| ribonuclease BN [Mycobacterium sp. KMS]
gi|126432954|ref|YP_001068645.1| ribonuclease BN [Mycobacterium sp. JLS]
gi|108767751|gb|ABG06473.1| ribonuclease BN [Mycobacterium sp. MCS]
gi|119692506|gb|ABL89579.1| ribonuclease BN [Mycobacterium sp. KMS]
gi|126232754|gb|ABN96154.1| ribonuclease BN [Mycobacterium sp. JLS]
Length = 387
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 107/272 (39%), Gaps = 18/272 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGA 69
+ + +V++ G +A+ I+ A +S+FP ++ G +G + +++
Sbjct: 18 VIAVVYKYVDDQGGYLAALITYYAFVSLFPLLLLLTTALGVVLVGRPELQRQIVESTVNQ 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P I +++ Q + + + L A Y S +A++ ++N + V
Sbjct: 78 FP-----LIGEQLAQPEQLSGGAVAVVVGILGALYGGSGVGQAVQNAMNSVWAVPRNVRP 132
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + V +++ V + +A + A+ +L ++ G + T+
Sbjct: 133 DP---------IRSRVRSLLLLLVLGSAAIAATLLSAVGRAVDDLGVLGTAGVVVGTIAI 183
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLAS 247
L+ + + +LPG + + W Y+ S+ S A
Sbjct: 184 NTGILLVAFRTTTSRELTYRQVLPGALAGALIWQFLQWFGAGYVARTVSSASATNTVFAL 243
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L FLY++ V +L AELN + + + +
Sbjct: 244 VLGLLAFLYLISVSLVLCAELNVVRVDHLYPR 275
>gi|301057210|ref|ZP_07198339.1| YihY family protein [delta proteobacterium NaphS2]
gi|300448661|gb|EFK12297.1| YihY family protein [delta proteobacterium NaphS2]
Length = 450
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/313 (12%), Positives = 99/313 (31%), Gaps = 41/313 (13%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ I +++ A ++L+ +L++ P + G + +G + +
Sbjct: 39 RFRNACLKIFSIVFLKMLQDAVTFRARGLTLTVVLAMAPMLALGTAILKGIGVSEETQDL 98
Query: 63 IDVVFGAWPEVIAK---------------------------------------PITDEIL 83
A +
Sbjct: 99 AHRFLDQIVISSASQAGPETDPEDDLKPETALLPHSAADVKGSGQNLVIHLRGMVDKIFG 158
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ L + A ++ + L S+N + V + RS + ++L
Sbjct: 159 YINRTDFATLGFVGTAAILALVASFLAHLETSMNTIWEVKKGRSAWKRARNYLAVLILLP 218
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ + + + + + L ++ L + ++ FLP
Sbjct: 219 IAMNLGFAAMAVLQS--STLMAKLEDLLPSPWMVAFLLKMFPALVIAGAFAALYQFLPNT 276
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ + G ISW++ +L+ + + + Y+ +Y A++ L+++YM V F+
Sbjct: 277 NVSVFHSISGGFLAGISWLLVLLLYINLQLGVARYNAIYGSFATLPLVLLWIYMGWVIFL 336
Query: 264 LGAELNASMIIYY 276
+GAEL ++ ++
Sbjct: 337 IGAELVFALQVWR 349
>gi|237740376|ref|ZP_04570857.1| ribonuclease BN [Fusobacterium sp. 2_1_31]
gi|229422393|gb|EEO37440.1| ribonuclease BN [Fusobacterium sp. 2_1_31]
Length = 416
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/262 (10%), Positives = 91/262 (34%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P +L+ + GA ++ I +
Sbjct: 22 LKRAYEKYRGANSSFWVTSLSFYTILAIVPIFAILVSLSSWFGAKDYIINQIKDIAPLKS 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + ++ + L + + + + + N+ + + + RS
Sbjct: 82 DTLELLTDFSNNLLMDARSNVLAGVGFIFLGWTFIKMFSLIEDAFNQIWHIKKSRSLIRK 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + + ++ + + + ++ + + + + ++ +
Sbjct: 142 ISDYISFFIFLPLVFITLNGISLFF----------LAKIKDIGFLYYIIKNILPLFSMTV 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ L +P K+ I +++++ +F YST+Y G + I
Sbjct: 192 FFTALFLVMPNTIVKVFPAFVASIIVSVAFLIFQYIFFLLQFLLIGYSTVYGGFSVIFIF 251
Query: 252 LVFLYMLGVFFILGAELNASMI 273
++++ + ILG + +
Sbjct: 252 IIWIRISWFIIILGVHICYLIQ 273
>gi|149005772|ref|ZP_01829511.1| ribonuclease BN, putative [Streptococcus pneumoniae SP18-BS74]
gi|307126852|ref|YP_003878883.1| ribonuclease BN [Streptococcus pneumoniae 670-6B]
gi|147762712|gb|EDK69672.1| ribonuclease BN, putative [Streptococcus pneumoniae SP18-BS74]
gi|306483914|gb|ADM90783.1| ribonuclease BN [Streptococcus pneumoniae 670-6B]
gi|332077084|gb|EGI87546.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA17545]
Length = 286
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 118/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQILFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 281
>gi|15900558|ref|NP_345162.1| ribonuclease BN, putative [Streptococcus pneumoniae TIGR4]
gi|148997263|ref|ZP_01824917.1| ribonuclease BN, putative [Streptococcus pneumoniae SP11-BS70]
gi|149002344|ref|ZP_01827286.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS69]
gi|149020271|ref|ZP_01835163.1| ribonuclease BN, putative [Streptococcus pneumoniae SP23-BS72]
gi|168482885|ref|ZP_02707837.1| ribonuclease BN [Streptococcus pneumoniae CDC1873-00]
gi|168487251|ref|ZP_02711759.1| ribonuclease BN [Streptococcus pneumoniae CDC1087-00]
gi|168492815|ref|ZP_02716958.1| ribonuclease BN [Streptococcus pneumoniae CDC3059-06]
gi|168575327|ref|ZP_02721263.1| ribonuclease BN [Streptococcus pneumoniae MLV-016]
gi|169833347|ref|YP_001694130.1| ribonuclease BN [Streptococcus pneumoniae Hungary19A-6]
gi|225858485|ref|YP_002739995.1| ribonuclease BN [Streptococcus pneumoniae 70585]
gi|225860648|ref|YP_002742157.1| ribonuclease BN [Streptococcus pneumoniae Taiwan19F-14]
gi|237650324|ref|ZP_04524576.1| ribonuclease BN, putative [Streptococcus pneumoniae CCRI 1974]
gi|237821691|ref|ZP_04597536.1| ribonuclease BN, putative [Streptococcus pneumoniae CCRI 1974M2]
gi|303254762|ref|ZP_07340863.1| ribonuclease BN, putative [Streptococcus pneumoniae BS455]
gi|303259930|ref|ZP_07345904.1| ribonuclease BN, putative [Streptococcus pneumoniae SP-BS293]
gi|303261335|ref|ZP_07347283.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS292]
gi|303264001|ref|ZP_07349922.1| ribonuclease BN, putative [Streptococcus pneumoniae BS397]
gi|303266315|ref|ZP_07352205.1| ribonuclease BN, putative [Streptococcus pneumoniae BS457]
gi|303268782|ref|ZP_07354570.1| ribonuclease BN, putative [Streptococcus pneumoniae BS458]
gi|307067275|ref|YP_003876241.1| hypothetical protein SPAP_0646 [Streptococcus pneumoniae AP200]
gi|14972130|gb|AAK74802.1| putative ribonuclease BN [Streptococcus pneumoniae TIGR4]
gi|147756963|gb|EDK64003.1| ribonuclease BN, putative [Streptococcus pneumoniae SP11-BS70]
gi|147759659|gb|EDK66650.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS69]
gi|147930573|gb|EDK81555.1| ribonuclease BN, putative [Streptococcus pneumoniae SP23-BS72]
gi|168995849|gb|ACA36461.1| ribonuclease BN [Streptococcus pneumoniae Hungary19A-6]
gi|172043652|gb|EDT51698.1| ribonuclease BN [Streptococcus pneumoniae CDC1873-00]
gi|183569882|gb|EDT90410.1| ribonuclease BN [Streptococcus pneumoniae CDC1087-00]
gi|183576826|gb|EDT97354.1| ribonuclease BN [Streptococcus pneumoniae CDC3059-06]
gi|183578570|gb|EDT99098.1| ribonuclease BN [Streptococcus pneumoniae MLV-016]
gi|225720351|gb|ACO16205.1| ribonuclease BN [Streptococcus pneumoniae 70585]
gi|225727432|gb|ACO23283.1| ribonuclease BN [Streptococcus pneumoniae Taiwan19F-14]
gi|301799695|emb|CBW32260.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
OXC141]
gi|301801520|emb|CBW34212.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
INV200]
gi|302598302|gb|EFL65347.1| ribonuclease BN, putative [Streptococcus pneumoniae BS455]
gi|302637469|gb|EFL67956.1| ribonuclease BN, putative [Streptococcus pneumoniae SP14-BS292]
gi|302638849|gb|EFL69310.1| ribonuclease BN, putative [Streptococcus pneumoniae SP-BS293]
gi|302641647|gb|EFL72006.1| ribonuclease BN, putative [Streptococcus pneumoniae BS458]
gi|302644126|gb|EFL74383.1| ribonuclease BN, putative [Streptococcus pneumoniae BS457]
gi|302646406|gb|EFL76632.1| ribonuclease BN, putative [Streptococcus pneumoniae BS397]
gi|306408812|gb|ADM84239.1| Predicted membrane protein [Streptococcus pneumoniae AP200]
gi|327390387|gb|EGE88728.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA04375]
gi|332075951|gb|EGI86417.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA41301]
gi|332203816|gb|EGJ17883.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA47368]
Length = 286
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 118/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 281
>gi|322436384|ref|YP_004218596.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
gi|321164111|gb|ADW69816.1| ribonuclease BN [Acidobacterium sp. MP5ACTX9]
Length = 305
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/271 (17%), Positives = 102/271 (37%), Gaps = 6/271 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAW 70
I A+ + D + + SA++S+FP ++ A + L V D
Sbjct: 22 IQRALFDALAHDCLNLGQSAAYSAMVSLFPAMIVTAAIIALLPDTAPLRSQVGDFFDQVL 81
Query: 71 PEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVV-EMRS 127
P + +T + + ++A + +S+ + L + RA + + +
Sbjct: 82 PADVLPLLTSYFVASPGASPHTIRALILAAFVSFTGASSVIATLMEGIARANGLPRDCWT 141
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIYAT 185
+ R+ +F V ++ + LV+ + + V ++ I R +
Sbjct: 142 FGQRRMRAFLLVPISLIPLVLATILVVFGQFFSIWLALHLAPFIRPTFYAIALAVRWIVS 201
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + ++ K LPG I W V + F Y+ F+ Y +Y L
Sbjct: 202 LAGVVGLTALIYHLGTPLKQHWRRTLPGAIAATAIWFVSTLAFGWYVTRFANYGQVYGSL 261
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + L +LY++ + ++GAE N+ ++
Sbjct: 262 GAGIALLFWLYIVFLSVLVGAEFNSHFYQHF 292
>gi|302525685|ref|ZP_07278027.1| predicted protein [Streptomyces sp. AA4]
gi|302434580|gb|EFL06396.1| predicted protein [Streptomyces sp. AA4]
Length = 344
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 106/285 (37%), Gaps = 10/285 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
R + + D I A +++ G+ + I+ +LLS+ P ++ ++ AGF+ +
Sbjct: 19 RARYRWL-DHIARATNRYIDYGGYHYVASITYFSLLSLVPILMVASSAAGFVLATQPHLL 77
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + G+ P I ++ + + G+ + Y N + ALR +L
Sbjct: 78 DALVRGISGSLPGPIGSQVSSLLTGFVE-QRTGVGVAGLVVGLYSGWNWMNALRDALTAM 136
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---I 176
Y + ++ LL +++SF A+ + + +
Sbjct: 137 YGQNRSEGPLLRTILMDVLALLGLAAALLVSFGISVSGTAVGRSLLGLVGVEDTSWGHNL 196
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + +LA ++ ++V LP + S + G + + + + + Y+
Sbjct: 197 LSFVSVPLALLADWLVFLWVLTRLPRERVGWRSAMRGAVAAAVGFELLKLAGGFYL-NLI 255
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ S S++ L F+ ++ I A+ +KP
Sbjct: 256 SKSPSGVAFGSVIGLLFFISLIARMLIYITAWTAT--ARDAPRKP 298
>gi|254796762|ref|YP_003081598.1| YihY family protein [Neorickettsia risticii str. Illinois]
gi|254590007|gb|ACT69369.1| YihY family protein [Neorickettsia risticii str. Illinois]
Length = 279
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 64/271 (23%), Positives = 130/271 (47%), Gaps = 7/271 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AHQFV 59
+F ++ ++ + + G A ++S LLS+FPF+ F +AG + +++
Sbjct: 2 KRIFAVLKISLYNMLYHGGSEYAGYLSFLLLLSIFPFLFFFTAVAGHIANIIGASSYEIT 61
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ V PE I + I I ++L P GL T++ L A + +S+ VE L+ ++N+A
Sbjct: 62 RKLLSVFIENVPENIIEGIMPYIKEILEGPTHGLLTLTILGAIWTASSIVEGLKAAVNKA 121
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y + ++ ++ + + ++ VF+ P + K L L W
Sbjct: 122 YN-FGTEALVSEYILRRLISVIQFLLISVIILVFLLFPTIYPLLTKKVSFLHTLKRPSWL 180
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
T +F + +++F P K ++PG I W++ ++ F+ Y+ +F+ +
Sbjct: 181 PYSTITTCCVFFFVSALYIFFPKEKQGFCDVIPGSIMVVSLWILTSIAFSFYLHSFAQMN 240
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y +A I+ +++ Y+L + FI GAE+NA
Sbjct: 241 IIYGSIAGIIVVMLYFYLLNLCFIYGAEINA 271
>gi|301793838|emb|CBW36231.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
INV104]
gi|332204674|gb|EGJ18739.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA47901]
Length = 286
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 118/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLCFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 281
>gi|325920512|ref|ZP_08182437.1| putative membrane protein [Xanthomonas gardneri ATCC 19865]
gi|325548995|gb|EGD19924.1| putative membrane protein [Xanthomonas gardneri ATCC 19865]
Length = 315
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/288 (17%), Positives = 100/288 (34%), Gaps = 20/288 (6%)
Query: 1 MREYFCIVFDII-YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
++++ + + + F+E D A+ +S ALLS+ ++
Sbjct: 9 LQKHLGRLQRSLPMALLNRFLEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQ 67
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLN 117
++ + A+ I P G S L ++ L+ +LN
Sbjct: 68 EALVQQIAQLAGGSAAEVADTVIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALN 127
Query: 118 RAYRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 128 LIFRTDKERLEGVVAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP---- 183
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
T+ + F++ +LP G + T + + +G YI
Sbjct: 184 ------AIGYVTTLALYSLAFAFLYRYLPDRTVNWRQAFVGGVITALLFALGRYGIGLYI 237
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA L A + +
Sbjct: 238 AKAAPGSA-YGSMGTLVILLVWMYYASVVFFVGALLTAVIDERVRSHR 284
>gi|309800620|ref|ZP_07694764.1| ribonuclease BN, putative [Streptococcus infantis SK1302]
gi|308115766|gb|EFO53298.1| ribonuclease BN, putative [Streptococcus infantis SK1302]
Length = 287
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 118/271 (43%), Gaps = 5/271 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + + + +
Sbjct: 13 LLKAFLHYYHVSDIELTSVAVAYYWLISIFPLLMIVVNILPYFQIP--ISDFLISLKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + +VL P+ GL + + ++A + S + L+ + N+AY + + R
Sbjct: 71 PDTIYDVVAKIAREVLTQPSAGLLSFAVISALWTFSKSMNFLQKAFNKAYGIAKNRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S L + I F+ + + L ++ ++ + +L + + + LF
Sbjct: 131 HQLMSLLVSLGLQILFAIALFLSMFGHMLLDLLKNYWKSESSLFAYLQDFTGPLIYVFLF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
LI ++ FLP K +I +LPG +F ++ + +F+ Y + Y +SI+
Sbjct: 191 AILIMLYYFLPNVKIGRIRYVLPGSLFVLLTLISLLTIFSAYFNNYVNYLVDVRFFSSII 250
Query: 250 TC--LVFLYMLGVFFILGAELNASMIIYYWR 278
+ + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFIIIAKLLIVGAVINASVQSLKDP 281
>gi|295835721|ref|ZP_06822654.1| ribonuclease BN [Streptomyces sp. SPB74]
gi|295825650|gb|EDY45725.2| ribonuclease BN [Streptomyces sp. SPB74]
Length = 317
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 4/274 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + D+ F DG+ A ++L +L+V P ++ L+ L + G
Sbjct: 33 WQLARDSFVRFRYADGFTNARALALQTVLAVTPLVIASVGLSTSLHTENLGRLAQLTLHG 92
Query: 69 AWPEVIAKPITDEILQVLAVPAKG---LFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
A+ + + + + G A+ + + + + NR Y
Sbjct: 93 VAAGPSAEVVDEALERGEYAAGDGDEIALWFGAIFSLVNVTTAMCQIERGANRIYGNERD 152
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R +++ L A + L + V +A + + + R
Sbjct: 153 RPFHLKYGRGLVMALTAGIPLGLGFVVMIAGGHLATAATTVYGLGAHARAVWEYARWPLG 212
Query: 186 MLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+L I V P K + G W + L + Y+ ++ T+Y
Sbjct: 213 LLLALIAASVVFRSAPRRKQPGYTWLAFGAGVYLSLWTLLTYLLSLYLRLSGSFDTVYGP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
L++ M+ L++ Y+ V LG A +
Sbjct: 273 LSAFMSLLLWAYLTSVCLFLGLSFAAHLEASRAH 306
>gi|312890004|ref|ZP_07749548.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
gi|311297536|gb|EFQ74661.1| ribonuclease BN [Mucilaginibacter paludis DSM 18603]
Length = 317
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 50/283 (17%), Positives = 101/283 (35%), Gaps = 6/283 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
++ V+ + F+++ G +++ ++ + S+ P ++ +LA F G
Sbjct: 6 KKSLLSVWKVASATFNGFLDDKGLKLSASLAYYTVFSIAPLLILLISLASFFYGQDAIQG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRA 119
V V A I I V G+ + +S ++ SLN
Sbjct: 66 KVFSQVNAFVGNQAAAQIQSMIKSVSLSGKTGVAVVTGIITLILGASGVFLEIQESLNII 125
Query: 120 YRVVEMRSWYITRLIS---FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+RV ++I+ + L+ + +++ + + + LL+
Sbjct: 126 WRVKAKPKRGWVKMITNRLLSFSLIIGLGFLLIVSLIINGVIIALSDHLTHYFPNATLLV 185
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + T + + + FLP + G FT + +++G L YI T
Sbjct: 186 LNVINLGLTFIVISALFGIIFKFLPDVNISWKEVRMGAFFTALLFMLGKYLIGIYITTTG 245
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
T ST A S++ LV++Y GAE + K
Sbjct: 246 TGSTYGAA-GSLIVILVWIYYTSAILYFGAEFTQVYAEFTGCK 287
>gi|258510959|ref|YP_003184393.1| ribonuclease BN [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257477685|gb|ACV58004.1| ribonuclease BN [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 285
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/270 (18%), Positives = 115/270 (42%), Gaps = 3/270 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
MR F + + D ++A+ I+ A+ S+ P ++ A + V
Sbjct: 1 MRSRFQQAQAFARKLGANCMVHDITSLAAQIAFYAMFSLLPLLILVMYGASLVVPHRIIV 60
Query: 60 PTVIDVVFGAWPE-VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V+ + +P+ A + + L L+ +S ++ A+ +++ + A++ +L+R
Sbjct: 61 EMVLGALRPYYPDLQNANQMLENSLNKLSDIGARAGLVSFISLAWSATSALIAVQQALDR 120
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ V RS+ R I+ +++ + V+ + P + ++ +
Sbjct: 121 IFEVGVPRSFLARRAIAALFLVALVILAVVSALAMALYPWVVHHIPAGTWFVTAFTRFSG 180
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
R+ L+LF+ V+ +LP+ + + + G + + + +LF Y TY
Sbjct: 181 VTRMLYP-LSLFVTCFVVYRYLPSRRVNLNCTILGALAATVLLDLARLLFVVYAAHAVTY 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y GL ++ + ++Y+ + +LGAE+
Sbjct: 240 HAVYGGLTVVILLIFWMYIALIILLLGAEI 269
>gi|124021942|ref|YP_001016249.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9303]
gi|123962228|gb|ABM76984.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9303]
Length = 314
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 104/298 (34%), Gaps = 21/298 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
+ + + ++ A ++ D +++ + L S FP ++ ++A + H
Sbjct: 9 KRWARWLVASLWRAYLRWMRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLD 68
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++D P + + +++++ G + A+ + N L+ +R
Sbjct: 69 QQIVDFTAQVLPPSVVGLVESTLVKLV-KQGFGAGLLGAVFLMVTAGNAYLTLQRGADRL 127
Query: 120 YR-------------VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY---- 162
+R V R +++ + +V V V + +
Sbjct: 128 WRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVIMVGVLVVVDQISVNVRMIPGAVWDELI 187
Query: 163 -VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
+ AL + + ++ G+ +L L + + LP+ + + ++PG
Sbjct: 188 STTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGSFLIGTLL 247
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++ + I++ T Y + ++ +++M+GV G + +
Sbjct: 248 TILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLASRSRHH 305
>gi|168492268|ref|ZP_02716411.1| ribonuclease BN [Streptococcus pneumoniae CDC0288-04]
gi|183573531|gb|EDT94059.1| ribonuclease BN [Streptococcus pneumoniae CDC0288-04]
Length = 286
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 118/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S + F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYAFLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 281
>gi|74316985|ref|YP_314725.1| ribonuclease BN [Thiobacillus denitrificans ATCC 25259]
gi|74056480|gb|AAZ96920.1| ribonuclease BN [Thiobacillus denitrificans ATCC 25259]
Length = 300
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 49/280 (17%), Positives = 108/280 (38%), Gaps = 12/280 (4%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F + + ++ + +M + I+ + S+ P +V +AG + + I
Sbjct: 5 RSLFVLARKVVSAYIADYAPSMGAAIAYYSAFSLAPLLVIVIAVAGAVFGRDAIQGQIVA 64
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVV 123
G + + +++ + KGL +S A ++ L+ +L+R ++V
Sbjct: 65 QIGGLIGQEGAILVERLVRSASDTEKGLVAGLVSGGVLALGATTVFAELQRALDRIWKVP 124
Query: 124 EM------RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + RL+SFG +L + L++ V AI + + P +L +
Sbjct: 125 KSERPSGIWALLRARLLSFGLILGLAFLLMVSLIVSTAIAVFGRWTGALMPGWEVVLQCV 184
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ + + +P+A + G T + + +G +L Y+ S
Sbjct: 185 NMA---ISLSITTLLFAMIFKLMPSADVAWRDVWIGAAVTAVLFELGKLLIGLYLGK-SA 240
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S +A S++ L ++Y F+LGAE +
Sbjct: 241 LSESFAAAGSLVVLLAWVYYASQIFLLGAEFTKVYADEHG 280
>gi|21233247|ref|NP_639164.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66770189|ref|YP_244951.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
gi|21115081|gb|AAM43055.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66575521|gb|AAY50931.1| ribonuclease BN [Xanthomonas campestris pv. campestris str. 8004]
Length = 330
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/286 (17%), Positives = 96/286 (33%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + F+E D A+ +S ALLS+ ++
Sbjct: 26 KHLTRVQRSLPMALFNRFLEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEA 84
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ + A+ I P G S L ++ L+ +LN
Sbjct: 85 LVQQIAQLAGGSAAEVADTVIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLI 144
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 145 FRTDKQRLDGIMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 198
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI
Sbjct: 199 ----AVGYVTTLALYSLAFAFLYRYLPDRTVNWRQAFVGGVITSLLFALGRYAIGVYIAK 254
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA L A + +
Sbjct: 255 AAPGSA-YGSMGTLVILLVWMYYASVVFFIGALLTAVIDERVRSHR 299
>gi|302544632|ref|ZP_07296974.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC
53653]
gi|302462250|gb|EFL25343.1| putative integral membrane protein [Streptomyces himastatinicus
ATCC 53653]
Length = 322
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 96/269 (35%), Gaps = 8/269 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + E +A+ I+ + L+ FP + GA + + +
Sbjct: 19 RVMRTHAWRSYERLQRVHWSRLAAAITFISFLAFFPLVTVGAAIGAATLTESQMHQLQRK 78
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + ++Q A + ++ + V +LR L + + E
Sbjct: 79 LAQQIPGISGQLDLSGLIQ----NAATIGIVAGALLLFTGIGWVGSLRECLRAVWELEED 134
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNGRI 182
+TR + G VL+ + + SF + + + + + ++W
Sbjct: 135 PGNLVTRRLKDGLVLIGLGGVALASFAVSTLAVTVVHRMTQLLQIPENGVGGWLLWIAAF 194
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ A F+ L +V +LP + ++ + I + + +L + Y+ + S MY
Sbjct: 195 LIAVAADFLLLCYVLTWLPRVEPPRRRVVVAALIGAIGFELLKLLLSSYLRGVAAKS-MY 253
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 254 GAFGVPIALLLWINFTAKLTLYCAAWTAT 282
>gi|306824943|ref|ZP_07458286.1| possible ribonuclease BN [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432770|gb|EFM35743.1| possible ribonuclease BN [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 286
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/271 (17%), Positives = 116/271 (42%), Gaps = 5/271 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + V + +
Sbjct: 13 LLKAFLYYYQASDSELTSVAVAYYWLISIFPLLMIMVNILPYFQIP--VSNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ + + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTVYDVVAKIVREVLTQPSTGLLSFAVLSALWTFSKSMDFLQKAFNKAYGVTKSRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S L + + F+ + + L + ++ + L + + +F
Sbjct: 131 HQLMSLLVSLGLQILFALALFLSMFGRMLLNLFKTYWQSDSPLFSYLQDFTGPLVYALIF 190
Query: 191 IGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+ ++ FLP K+ +LPG +F ++ + +F+ Y + + +SI+
Sbjct: 191 AILVMIYYFLPKVKTPRIRYVLPGSVFVLLTLIFLLNIFSVYFNNYVNHLVDVRFFSSII 250
Query: 250 TC--LVFLYMLGVFFILGAELNASMIIYYWR 278
+ + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFILIAKILIIGAVINASVQSLKDP 281
>gi|255021122|ref|ZP_05293175.1| Ribonuclease BN [Acidithiobacillus caldus ATCC 51756]
gi|254969536|gb|EET27045.1| Ribonuclease BN [Acidithiobacillus caldus ATCC 51756]
Length = 293
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 97/261 (37%), Gaps = 11/261 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
A F +D AS ++ + LL + PF V +L +G + + ++V ++
Sbjct: 35 FARAGHGFWLDDCIDRASLLAYTTLLGIVPFAVVVFSLWNLVGFDDSLRIQLNELVLRSF 94
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + + +I ++ A L A + ++A+ LN + V W
Sbjct: 95 MPSVGETVLRQIDRL-AARGTQLGYFGVAGLAVTAILLIQAIERHLNAIWGVSPGSRW-R 152
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L ++ + L + I L + L +
Sbjct: 153 RILRYLLILVFGPLGLAASLVLLGPIGAMLQWFG-------PLPKALTGLTALVAFSVEA 205
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
L V+L LPAA+ + G + G +L Y+ FST+ ++Y LA+
Sbjct: 206 GLLSLVYLSLPAARVTLRDAFLGGFAAALLLSSGKLLLGLYL-RFSTFESLYGALAAFPI 264
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L++L++ + GAEL A+
Sbjct: 265 FLLWLFLAWCGVLFGAELAAA 285
>gi|212697027|ref|ZP_03305155.1| hypothetical protein ANHYDRO_01592 [Anaerococcus hydrogenalis DSM
7454]
gi|212675802|gb|EEB35409.1| hypothetical protein ANHYDRO_01592 [Anaerococcus hydrogenalis DSM
7454]
Length = 291
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/284 (19%), Positives = 112/284 (39%), Gaps = 12/284 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + I + IE D +AS +S L + P ++ NL +
Sbjct: 1 MKIKSSNIKKFILNLIERIRNHDLMTLASSLSYYFLSAAIPMLLVLLNLVT--KYMKGNE 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRA 119
V+ P+ I I + ++ + + TI+ + A + +S GV + +++N A
Sbjct: 59 DVVIEFIKLLPDSIRGVILLIVKSIIDSGSASTISTITLIFALWSASKGVSKIILAINVA 118
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF------PALGNL 173
Y + + S ++ F Y + L+ M + + L + +L
Sbjct: 119 YGLEDDHSMIKNKIFGFLYTFILIFILIFMFLLKIYSNGILRIIEDVLKIVNSSFSLDEF 178
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPA---AKSKIMSILPGVIFTWISWVVGAVLFTH 230
+I + L +GL ++ P K K G I T + + + +++
Sbjct: 179 TWLINLISGIIPPIILILGLTLLYKAAPYNNSIKIKFKDAFVGSISTSLMIFITSFGYSY 238
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++ S S +Y LA I+ LV++ + + ILGAE+ A+ +
Sbjct: 239 FLKNMSNMSVIYGALAGIIALLVWMLLFSLTIILGAEIIAAYMK 282
>gi|297192555|ref|ZP_06909953.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|197718096|gb|EDY62004.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 307
Score = 97.0 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 85/265 (32%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ I+ + L++FP I A + Q + + D +
Sbjct: 21 HAWRSYETLDRVHWTRLAAAITFLSFLALFPLITVAAAIVAAALDQQALDKLDDKIAEQV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR--VVEMRSW 128
P + + ++ A + ++ V ++R L + + +
Sbjct: 81 PGISDQLDIQALV----ANAGTVGVVAGALLLLMGVGWVGSMRECLRAVWERDDEDEGNP 136
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ G + T + + + + + +
Sbjct: 137 VVRKVKDVGVLAGLGCTGLASFAASALGSMTVGRTADLLGLDEGGVGGVLVKAAAVAVGV 196
Query: 189 L--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L F+ L++V LP + ++ + + + + +L YI ++ S MY
Sbjct: 197 LANFLILLYVLTLLPGVQPPRRRLVVAALIGAVGFELLKLLLGGYISGVASRS-MYGAFG 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 256 VPIALLLWINFTAKLLLFCAAWTAT 280
>gi|325928844|ref|ZP_08190011.1| putative membrane protein [Xanthomonas perforans 91-118]
gi|325540817|gb|EGD12392.1| putative membrane protein [Xanthomonas perforans 91-118]
Length = 347
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/286 (17%), Positives = 98/286 (34%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + F+E D A+ +S ALLS+ ++
Sbjct: 38 KHLSRLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEA 96
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ + A+ I P G S L ++ L+ +LN
Sbjct: 97 LVQQIGQLAGGSAAEVAQTIIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLI 156
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 157 FRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 210
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI T
Sbjct: 211 ----AVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIAT 266
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA + A + +
Sbjct: 267 AAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 311
>gi|126433842|ref|YP_001069533.1| putative ribonuclease [Mycobacterium sp. JLS]
gi|126233642|gb|ABN97042.1| putative ribonuclease [Mycobacterium sp. JLS]
Length = 343
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 101/278 (36%), Gaps = 10/278 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + FD + A E + + G A+ I+ + ++FP + G ++ GF+
Sbjct: 16 LRARYGW-FDHVMRAQERYKDSKGDFYAAGITYFTVFALFPLTMVGFSIGGFILASRPDL 74
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ +V + A + + + + + I AA+ + LR +L++
Sbjct: 75 LESVEKRITTAVSGDFGQQLVQVMNAAID-SRTSVGLIGLATAAWAGLGWMANLREALSQ 133
Query: 119 AYRVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ + E + T+L ++ + L + + L + A+ L +
Sbjct: 134 MWGLQRGERPGFLRTKLSDLLALVSTFLALAVTIAITALGDRGLMRRILKWLAIPELPGL 193
Query: 177 IWNGRI---YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
RI ++L ++ ++ LP + S + +++ V L + Y+
Sbjct: 194 SIGLRIASLLVSLLVSWLLFTWIIARLPRESITLRSSARAGLLAAVAFEVFKQLGSVYLR 253
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ A ++ +VF Y+ + A+
Sbjct: 254 SVVD-GPAGATFGPVLGLMVFAYITSRLILFATAWAAT 290
>gi|322651329|gb|EFY47713.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
Length = 303
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 19 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 79 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 138
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 139 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 198
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 199 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 257
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
A S++ + F Y + A A+ + P
Sbjct: 258 SGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 298
>gi|149010721|ref|ZP_01832092.1| ribonuclease BN, putative [Streptococcus pneumoniae SP19-BS75]
gi|147765202|gb|EDK72131.1| ribonuclease BN, putative [Streptococcus pneumoniae SP19-BS75]
Length = 286
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 54/283 (19%), Positives = 116/283 (40%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAVVLLVILGVLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 281
>gi|118617113|ref|YP_905445.1| integral membrane protein [Mycobacterium ulcerans Agy99]
gi|118569223|gb|ABL03974.1| conserved integral membrane protein [Mycobacterium ulcerans Agy99]
Length = 342
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 108/287 (37%), Gaps = 9/287 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + FD A + F E+ G A ++ + ++FP ++ G + GF+
Sbjct: 16 LRARYGW-FDHAMRAAKRFNEQRGGFFAGGLTYYTIFALFPLLMVGFAVFGFVLASHPDL 74
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T+ + + +++ + + + + I A++ + LR++L+
Sbjct: 75 LKTINGKIRESVSGALSQQLVGLMNSAIDA-RASVGLIGLATASWAGLTWMSHLRVALSE 133
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLL 174
+ R Y+ +S ++ + + +++ A+ P+A P L
Sbjct: 134 MWAHPVQRVGYVRTKLSDLTAMIGTFLVTMLTIALTALGHLRPMATVLSWFGIPELAIFN 193
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ I ++L ++ ++ LP ++ + + + I + + + + Y+ T
Sbjct: 194 VVFRLISILISVLVAWLMFTWMIARLPRQPGRLGTSMQAGLMAAIGFELFKQVASIYLRT 253
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A ++ +VF + + A+ Y +P
Sbjct: 254 VL-RSPAGAAFGPVLGLMVFANVTAYLVLFATAWAATKDPYSEHIEP 299
>gi|313904998|ref|ZP_07838369.1| ribonuclease BN [Eubacterium cellulosolvens 6]
gi|313470255|gb|EFR65586.1| ribonuclease BN [Eubacterium cellulosolvens 6]
Length = 296
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 95/266 (35%), Gaps = 4/266 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ A+ + LS I L+ + + P + +
Sbjct: 24 RGFFHGLGRRNVGTYAASTAFFLFLS---LIPILILLSSLIPSTNMDPERMSHLVTVVTP 80
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ ++++ + L IS + + +S G AL LN AY V E R +
Sbjct: 81 DVVDGFVSKLIREAYAKSHDLLPISVVTLIWAASQGTVALLRGLNEAYHVKEHRRYLELL 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
++S Y + +M V V + + ++ P L R+ + + +
Sbjct: 141 ILSIIYTAGLIFLVYVMMTV-VFGNQIVDFFQEHMPWLSVPTWFYHRSRVAISFVLAILI 199
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
++ PA K LPG +FT + W + F YI F+ Y+ Y L ++ +
Sbjct: 200 FSLLYKLAPAGYRKFSRQLPGAVFTAVVWEIFTFFFQMYIGGFNRYTMFYGSLGTLAIFM 259
Query: 253 VFLYMLGVFFILGAELNASMIIYYWR 278
++Y F++G +N + R
Sbjct: 260 FWMYCCFYIFLVGGYINHHFEEWIDR 285
>gi|189467583|ref|ZP_03016368.1| hypothetical protein BACINT_03973 [Bacteroides intestinalis DSM
17393]
gi|189435847|gb|EDV04832.1| hypothetical protein BACINT_03973 [Bacteroides intestinalis DSM
17393]
Length = 307
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 101/284 (35%), Gaps = 10/284 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ ++ I+ D + F+++ ++ ++ + L S+ PF+ + G
Sbjct: 10 KLSLSLLIKIVKDTGQGFIDDSVTRLSGSLAYATLFSIIPFLSLLVTI-GVALHMDLANQ 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + I + +S + + ++ ++ SLN +
Sbjct: 69 LYIQLEPIVGAEVIGALRLIIEHAERTDSSASAAIVSLGISIFGATTIFAEIQSSLNSIW 128
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + RL+SF +L+ + L+I + I +P +
Sbjct: 129 GIKAVPKKSWLKYIQNRLLSFSIILVFAFVLLITFSITNIIGDLSNKFMASYPEVAGF-- 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I+ + I + + LP AK K + G + T + +VG + YI
Sbjct: 187 IVKVVGQVLNIGVTVIIFVLIFKVLPDAKIKSKDVFIGAVVTTLLLLVGQWGISFYIG-I 245
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ T+Y A ++ + ++Y + GAE + K
Sbjct: 246 ANVGTIYGAAAFMVVFITWIYYSAIIVYAGAEFTKAWANEMGSK 289
>gi|84498025|ref|ZP_00996822.1| membrane protein ribonuclease BN-like family protein [Janibacter
sp. HTCC2649]
gi|84381525|gb|EAP97408.1| membrane protein ribonuclease BN-like family protein [Janibacter
sp. HTCC2649]
Length = 370
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/264 (15%), Positives = 95/264 (35%), Gaps = 6/264 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
++ A + + + G +A ++ A S+FP + + G L G Q++ + D +
Sbjct: 16 LWGAWKRYGDARGNLLAGGVTYFAFFSIFPAVALAFTVFGVLLQGNPQWLDEIKDYLNQT 75
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYRVVEMR 126
P I T+ ++ + L + + + ALR + + V
Sbjct: 76 LPGFIQDGGTEGLIPLTIPSGDTLTVTGLIGLAGLLFAGLGWLGALRDGIRTIFGVEGQP 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++T + VL+ +++S I A LG ++
Sbjct: 136 GNFVTTKLRDLGVLVILGMAIVVSAAVTGIAGAATSWVAEAIGLGGQAWLLSVIAFVVGA 195
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ + L ++ G + + + VL I ++ + ++A +A
Sbjct: 196 VLDGLVVLVMLRLLSGVDVPRRGLIGGAVIGGVGLTLLKVLGATVIAGTTS-NPLFASIA 254
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
++ L +L + +L A +A
Sbjct: 255 LVVGLLAWLNFMSRIVLLAAAWSA 278
>gi|253987725|ref|YP_003039081.1| hypothetical protein PAU_00242 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779175|emb|CAQ82335.1| similar to putative membrane protein yhjd of escherichia coli
[Photorhabdus asymbiotica]
Length = 346
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 95/271 (35%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A F + G + I+ + LS+ P ++ +AGF+ + +I+ +
Sbjct: 67 HFIRATLRFNDRMGNQFGAAITYFSFLSLIPILMLSFAIAGFILASNPDLLAKLINGIAN 126
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + A Y N V LR ++ + V +R+
Sbjct: 127 SISDPTLANTLKNSVDTAIKQRTTVGLTGLAIALYSGVNWVSNLRQAILAQFHPVWLRNQ 186
Query: 129 YITRLISF--------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ I F LL ++ + + A+ + L +
Sbjct: 187 EDEKKIYFKYIRDAISLIGLLLALVITLSLTSIAGSAQAIIVEILGLSGIEWLRPSWFLI 246
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +++A ++ +++ LP + + ++L G + I + V + T + ++ S
Sbjct: 247 GLAISIIANYLLFLWLFWVLPHHQPERKALLKGTLMAAIGFEVIKYIMTMTLPRLAS-SP 305
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y+ + A A+
Sbjct: 306 SGAAFGSVIGLMTFFYLFARLTLFCAAWIAT 336
>gi|255003094|ref|ZP_05278058.1| hypothetical protein AmarPR_02223 [Anaplasma marginale str. Puerto
Rico]
Length = 291
Score = 96.7 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 60/265 (22%), Positives = 119/265 (44%), Gaps = 12/265 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-----FLGAHQFVPTV 62
AI F DG + +++ LL+ FPF+VF + F+ +
Sbjct: 29 FLRCAGLAIADFRRHDGLVYSGYLAFIFLLATFPFLVFFTAMTSTALNVLDKHEDFLQGL 88
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + P + I ++L+ P + L T++ + + +S+ +E +R LN+A+RV
Sbjct: 89 VTSLLSELPHETIAALLPRINEILSGPPQSLLTVAVVGIVWTASSAIEGMRTVLNKAFRV 148
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + R++S L+ + ++ V +P+ L + + + LG +
Sbjct: 149 SAPPPYILGRMLSILQFLVIVLVMMFSVLFIVFVPIVLDVLDQKWGYLGY-------IKY 201
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + L + + ++ +P + +I ILPG + I W + F+ Y+ F TMY
Sbjct: 202 TLSEVILCLSVALLYFMVPNTRQRIGVILPGAVVVTILWTASSFTFSWYLSNFRVLHTMY 261
Query: 243 AGLASIMTCLVFLYMLGVFFILGAE 267
L+ I+ ++F Y+L +FFI GA
Sbjct: 262 GNLSGIIASMLFFYILSIFFIYGAV 286
>gi|323466993|gb|ADX70680.1| Methionine aminopeptidase Map [Lactobacillus helveticus H10]
Length = 289
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/267 (20%), Positives = 109/267 (40%), Gaps = 8/267 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 5 LSQGEIIDSSIVIAYYILFSIFPIIIIIGNVLPLFHIDTA--PIAKYLNLIFPDQVSSFI 62
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 63 MPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLSMLNFLWTR 122
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + L + + V L + F + + I++ R L + +
Sbjct: 123 LIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSYRYPVIFLIIILA 182
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K I PGV T W+ + LF+ Y+ F Y + + + +
Sbjct: 183 VFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWKNYGIVGTFIIFM 242
Query: 253 VFLYMLGVFFILGAELNASMIIYYWRK 279
++L + + F+ G +NA++I K
Sbjct: 243 LWLNIASLLFLFGVAVNATIIRNRIGK 269
>gi|148989029|ref|ZP_01820429.1| ribonuclease BN, putative [Streptococcus pneumoniae SP6-BS73]
gi|147925526|gb|EDK76603.1| ribonuclease BN, putative [Streptococcus pneumoniae SP6-BS73]
gi|332202534|gb|EGJ16603.1| ribonuclease BN-like family protein [Streptococcus pneumoniae
GA41317]
Length = 286
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/283 (19%), Positives = 117/283 (41%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGLLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLKDP 281
>gi|302670427|ref|YP_003830387.1| YihY family protein [Butyrivibrio proteoclasticus B316]
gi|302394900|gb|ADL33805.1| YihY family protein [Butyrivibrio proteoclasticus B316]
Length = 265
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 1/225 (0%)
Query: 45 FGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF 104
L+ L + V A I I+ + +F+ISA+A+ +
Sbjct: 1 MLILLSSVLPYTSLTEEDLVRVMVELTPDFADDIMVRIVGEAYEQSVAVFSISAVASIWT 60
Query: 105 SSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR 164
+ G+ AL LN Y V E R+++ RLI+ Y + V ++IM + V +
Sbjct: 61 GALGMLALIRGLNIIYDVDERRNYFYLRLIAAFYTIAMIVIVLIMLVIMVFGDFVKQLIM 120
Query: 165 KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
+P + + N + + ++ F+P+A+ K + LPG +F+ I W V
Sbjct: 121 NAYPHVWTAISFFVNFKFIMVIGIATFAFAMIYTFIPSARMKFIYQLPGALFSAIVWYVF 180
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ LF+ Y+ TYS +Y LA+ + + +LY F++GA +N
Sbjct: 181 SWLFSLYVSLPDTYS-IYGSLATPVIMMFWLYFCIYIFLIGAFIN 224
>gi|21229026|ref|NP_634948.1| ribonuclease BN [Methanosarcina mazei Go1]
gi|20907572|gb|AAM32620.1| Ribonuclease BN [Methanosarcina mazei Go1]
Length = 288
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 107/276 (38%), Gaps = 11/276 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVID 64
D++ ++ ++E+D ++ ++ +LS+ I+F +L FL + + +I+
Sbjct: 4 GYTLDLVTRTVKEWMEDDAKTHSAALAFYFVLSLPALILFSISLGSIFLKSSRLQENIIE 63
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVV 123
+ G+ + I + V L I L + +SN L+ L +A+ +
Sbjct: 64 YLQGSVDQSIIDMMYALFENTPEVNFLSLGALIGFLLLLWSASNVFRQLKDFLEKAWDIK 123
Query: 124 EM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + + ++SF V+ LV + + + FP ++
Sbjct: 124 HVESSTIKDFIKNAIVSFFIVIGIGGLLVFSILIEGVLYTVSRLFQGVFPFSPSVAQYTG 183
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ A+ L L + + V+ LP K + + G + T I +G + Y + S
Sbjct: 184 SA---ASFLILVLFFMLVYRVLPDTKLGLKPVFVGSLVTVILITIGKYAMSLYFLY-SNP 239
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++Y + S + + +Y + +GAE
Sbjct: 240 VSVYGAIGSTVGLFLLIYYSSIMITIGAEFTKVYSE 275
>gi|320007739|gb|ADW02589.1| ribonuclease BN [Streptomyces flavogriseus ATCC 33331]
Length = 350
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/274 (16%), Positives = 101/274 (36%), Gaps = 14/274 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 3 WQLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGLIGLLGYVDDWTSTTTVASIERN 62
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V I V + ++ A + S V ++ Y
Sbjct: 63 ILGAVQTVLSERGVNDIAKPLIADVTTGARPDVISLGFAIALWSGSRAVNVFIDTITVMY 122
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + ++ + V P + + ++
Sbjct: 123 GLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP------DRVVEFVPWGTEVLAVM 176
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S + +PG + WV+G+ L Y+ + T
Sbjct: 177 YWPLVILLSIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTSTVEGPT 236
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y LA+ + L+++ + ++GA +NA++
Sbjct: 237 IYGSLAAPIAVLLWIGISAFAVLVGAAVNAAIDR 270
>gi|183981211|ref|YP_001849502.1| integral membrane protein [Mycobacterium marinum M]
gi|183174537|gb|ACC39647.1| conserved integral membrane protein [Mycobacterium marinum M]
Length = 342
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/287 (14%), Positives = 108/287 (37%), Gaps = 9/287 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R + FD A + F E+ G A ++ + ++FP ++ G + GF+
Sbjct: 16 LRARYGW-FDHAMRAAKRFNEQRGGFFAGGLTYYTIFALFPLLMVGFAVFGFVLASHPDL 74
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T+ + + +++ + + + + I A++ + LR++L+
Sbjct: 75 LKTIDGKIRESVSGALSQQLVGLMNSAIDA-RASVGLIGLATASWAGLTWMSHLRVALSE 133
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLL 174
+ R Y+ +S ++ + + +++ A+ P+A P L
Sbjct: 134 MWAHPVQRVGYVRTKLSDLTAMIGTFLVTMLTIALTALGHLRPMATVLSWFGIPELAIFN 193
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ I ++L ++ ++ LP ++ + + + I + + + + Y+ T
Sbjct: 194 VVFRLISILISVLVAWLMFTWMIARLPRQPGRLGTSMQAGLMAAIGFELFKQVASIYLRT 253
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A ++ +VF + + A+ Y +P
Sbjct: 254 VL-RSPAGAAFGPVLGLMVFANVTAYLVLFATAWAATKDPYSEHIEP 299
>gi|289167558|ref|YP_003445827.1| ribonuclease BN [Streptococcus mitis B6]
gi|288907125|emb|CBJ21959.1| ribonuclease BN [Streptococcus mitis B6]
Length = 286
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 53/283 (18%), Positives = 123/283 (43%), Gaps = 7/283 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
MR+++ + D + + ++ + D + ++ L+S+FP ++ N+ +
Sbjct: 1 MRKWWKELIDSPFLKAFLHYYQKSDSELTSVAVAYYWLISIFPLLLVLINILPYFHIS-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V ++V G P+ + + +++VL P+ GL + + L+A + S + L+ + N+
Sbjct: 59 VSNFLNVTNGFLPDTVYDVVAKIVMEVLTQPSTGLLSFAVLSALWTFSKSMNYLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +L+S + F+ V + L +++K++ + + L +
Sbjct: 119 AYGVAKSRGLIYQQLMSLLVSFGLQILFACALFLSVFGRILLDFLKKYWQSDNPIFLYLE 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKI-MSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +F + ++ LP K +LPG F ++ V+ +F+ + +
Sbjct: 179 DFTGPLVFTLIFAISVMIYYLLPNVKVPRIRYVLPGSFFVLLTLVLILNIFSASVNNYIN 238
Query: 238 YSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWR 278
++SI+ + + +L I+GA +NAS
Sbjct: 239 NLVDVRFVSSIIFVVTMFWFILLAKILIIGAVINASFQSLKDP 281
>gi|159899321|ref|YP_001545568.1| ribonuclease BN [Herpetosiphon aurantiacus ATCC 23779]
gi|159892360|gb|ABX05440.1| ribonuclease BN [Herpetosiphon aurantiacus ATCC 23779]
Length = 368
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 105/292 (35%), Gaps = 22/292 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---------GAHQFV 59
+ + + + +D MA+ ++ A+ S+FP I+ ++ GF A + +
Sbjct: 10 WPLTQRTFKAWTVDDCSRMAASLAYYAVFSIFPLILLLLSILGFWLRLQGDTNTNAEETL 69
Query: 60 PTVIDVVFGAWPEVIAK-----PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ VF P+V EIL+ L+ A I+ + +S +
Sbjct: 70 VNSLMQVFQTSPQVGVDDSAIRTALTEILKSLSQQAGTNAPIALATTFFAASGIFVQIDK 129
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF------P 168
+ + + + + ++ + S + LV++ + + L L+ V +
Sbjct: 130 AFDVIWDIQPQQGNFLHTVKSTLIERGKAFALVLVIGLLLISSLILSSVLQALENLSKSF 189
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L + + + + +P K + +LPG I T W +G ++
Sbjct: 190 DLPGVGVGWQIFTFATAFAINVLVFFLLFFAMPKPKMRWRDVLPGAILTAALWEIGKIVL 249
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ ++ ++ +A+ + L ++Y GAE + K+
Sbjct: 250 SLFLGGNKYTAST--TVAAFIALLAWIYYASQIIFFGAEFCRVYTDWNSTKR 299
>gi|167743415|ref|ZP_02416189.1| putative ribonuclease [Burkholderia pseudomallei 14]
Length = 292
Score = 96.3 bits (238), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 261 VLLMWLYFSAAVLLL 275
>gi|302035978|ref|YP_003796300.1| putative tRNA-processing ribonuclease BN [Candidatus Nitrospira
defluvii]
gi|300604042|emb|CBK40374.1| putative tRNA-processing ribonuclease BN [Candidatus Nitrospira
defluvii]
Length = 283
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 96/270 (35%), Gaps = 4/270 (1%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVF 67
+ + + F ++A+ ++ +LLS+FP + F+ + + +
Sbjct: 4 LSFLSNVFDTFRRRGCLSLAASLAFFSLLSLFPMVFLLLYGISFIVSQDVIGYQFLLGFL 63
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + + + +I +V A +FS+ L ++N + R
Sbjct: 64 KGFLPSMGERLARDIRRVAEQEEVRWAVFLAFG--WFSALVFYELDYAMNTVFGTAAKRH 121
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYATM 186
I+ L++ + + +I AI L AY +F L + +
Sbjct: 122 PLISTLVAVALIWMLGFLTLISFVATQAIELLTAYAPRFLGMNLVAIAAHDFLIAYSLPF 181
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L F + ++ FLP + G + WV LF Y+ + Y+ +Y L
Sbjct: 182 LLAFASVTCLYRFLPHQRPTWREATIGGAVFSLLWVSAKALFVTYLEDAAVYTQLYGSLL 241
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
++ ++++Y +LGA +
Sbjct: 242 EVVLLMLWVYYSSALVLLGAVVTHECQCSR 271
>gi|253752308|ref|YP_003025449.1| ribonuclease BN-like family protein [Streptococcus suis SC84]
gi|253754134|ref|YP_003027275.1| ribonuclease BN-like family protein [Streptococcus suis P1/7]
gi|253756068|ref|YP_003029208.1| ribonuclease BN-like family protein [Streptococcus suis BM407]
gi|251816597|emb|CAZ52235.1| ribonuclease BN-like family protein [Streptococcus suis SC84]
gi|251818532|emb|CAZ56363.1| ribonuclease BN-like family protein [Streptococcus suis BM407]
gi|251820380|emb|CAR46967.1| ribonuclease BN-like family protein [Streptococcus suis P1/7]
gi|319758704|gb|ADV70646.1| hypothetical protein SSUJS14_1586 [Streptococcus suis JS14]
Length = 307
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ D + ++ L+S+FP ++ ANL + V ++ VV P+ +
Sbjct: 17 FFSFYRSADSDVTSVAVAYYLLISIFPILLTLANLLPYYPFD--VDMILSVVAEFVPDKL 74
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I VL P+ IS L + S + L+ + N+AY + E R + I LI
Sbjct: 75 YPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLI 134
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ V +++ + +Y+ K P L + + ++ALF L+
Sbjct: 135 GIFLGIGLQVIILLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFTALV 194
Query: 195 FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM--TC 251
++ FLP + K+ + PG +F ++ LF+ Y+ ++ + + +++
Sbjct: 195 MLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVF 254
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + I+GA +NA++ +
Sbjct: 255 MLWFIFMAQVLIIGAMINATVQSMQVEE 282
>gi|326329431|ref|ZP_08195755.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
gi|325952757|gb|EGD44773.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
Length = 378
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 97/268 (36%), Gaps = 13/268 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F E+ G +A+ I+ A ++VFP ++ +++ GF+ G V+D +P
Sbjct: 17 VVYKFYEDQGNNLAAIITYYAFVAVFPILLLASSILGFVLEGNPGLQEAVLDTALAQFP- 75
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I D++ + + G + LAA Y + +++ ++N A+ V
Sbjct: 76 ----IIGDQLGRKELTGSTGAIIVGGLAALYGALGLGLSMQNAVNTAWSVPRNSRPNP-- 129
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ + L +++ + + I + I T+ +
Sbjct: 130 ---ILLRVRSLFMLAAGGLAILSVTALSLVLSHTDFLGFKAVDIGYWLVILGTVAIVTGM 186
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST-MYAGLASIMTC 251
L V + LPG I + W V ++ + M A ++
Sbjct: 187 LCVVFRMATTRDHSLAHALPGAITFAMLWQVLQYFGAEFVQHVLAATRGMNQTFALVLGL 246
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ FLY+ + ++ E+N + W +
Sbjct: 247 VAFLYIAALMVVISIEVNVVYSRHLWPR 274
>gi|269467889|gb|EEZ79628.1| hypothetical protein Sup05_1008 [uncultured SUP05 cluster
bacterium]
Length = 263
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/257 (14%), Positives = 89/257 (34%), Gaps = 9/257 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I ++ FV+ G+ A+ +S L +V P + G ++ ++ A
Sbjct: 2 IKAVLKRFVKRQGFDSAAILSFDTLFAVVPGLALGLSVFSLSPYFADFQQHLEQFLFAQL 61
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ E +Q A+ + +++ + + + +N + R W
Sbjct: 62 LPQNVGLAQEYIQQFIAQAQAIKGFTSIFLVFAVILLLYEIDKRINLTWHDHHHRHWMEG 121
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + L + + F L N L ++ I+ +
Sbjct: 122 LVSYLFVLFLGPILVGASLFFSSY---------AMASELFNDLPVMEYAPIFTPFALSSL 172
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
G ++ +P K + ++ L I + + YI F Y +Y L+ +M
Sbjct: 173 GFAVLYYSVPLEKIRFINALKAGIIAAVLLEIIKYAMFTYIQYFPLYELIYGTLSILMLV 232
Query: 252 LVFLYMLGVFFILGAEL 268
++++Y+ + +LG+
Sbjct: 233 MLWVYLAWIIVLLGSSF 249
>gi|33863913|ref|NP_895473.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9313]
gi|33635497|emb|CAE21821.1| similar to serum resistance locus BrkB [Prochlorococcus marinus
str. MIT 9313]
Length = 314
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 38/297 (12%), Positives = 108/297 (36%), Gaps = 21/297 (7%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFV 59
+ + + ++ A ++ D +++ + L S FP ++ ++A + H
Sbjct: 9 KRWARWLVASLWRAYLRWIRCDCVDLSAAFAYYTLQSFFPILLISLSVASWFLGRQHGLD 68
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++D P + + +++++ G + A+ + N L+ +R
Sbjct: 69 QQIVDFTAQVLPPSVVGLVESTLVKLV-KQGFGAGLLGAVFLMVTAGNAYLTLQRGADRL 127
Query: 120 YRV----VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL- 174
+R + ++ +L F + + +VI+ + V + +R A+ + L
Sbjct: 128 WRDLLPLPSTPAPFVVQLTRFLRARIEAFVVVILVGLLVVVDQISVNLRIIPGAVWDELI 187
Query: 175 -------------LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
++ G+ +L L + + LP+ + + ++PG
Sbjct: 188 RTTPWLAALLSRVPVLQVGQFVVPLLGLSGMALLLQALLPSRRVPLRPLVPGSFLIGTLL 247
Query: 222 VVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ ++ + I++ T Y + ++ +++M+GV G + +
Sbjct: 248 TILNLVVSRSILSLGTRYQAYGFIGGVLVLTFWVWMVGVILYFGQCWSVVLASRSRH 304
>gi|290958014|ref|YP_003489196.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260647540|emb|CBG70645.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 289
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 87/264 (32%), Gaps = 8/264 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ ++ + L++FP + A +A + D +
Sbjct: 21 HAWRSYERLDRVKWTRLAAAMTFISFLALFPLLTVVAAIAAATLGKDRQQDLEDRLAEQV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P + + +++ A + I+ + V +R L + + +
Sbjct: 81 PGISDQLDIAGLVE----NAGTVGIIAGALLLFTGIGWVGEMRGCLRAVWEKPDADENPV 136
Query: 131 T-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATML 187
+ G ++ +++ A A+ + ++ +L
Sbjct: 137 LAKAKDTGVLVGLGGAVLVSLAASTAASWAVGRFADELGIDRDGWGGILLRVAAFAVAVL 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L++V LP ++ + + + + +L + Y+ ++ S MY
Sbjct: 197 ADFLLLLYVLTLLPGVHPPRRRLVVAALIGAVGFELLKLLLSGYMQGIASKS-MYGAFGV 255
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A
Sbjct: 256 PIALLLWINFTTKLLLYCAAWTAE 279
>gi|256375638|ref|YP_003099298.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
gi|255919941|gb|ACU35452.1| ribonuclease BN [Actinosynnema mirum DSM 43827]
Length = 431
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/277 (15%), Positives = 101/277 (36%), Gaps = 9/277 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-------AHQF 58
++ I E + ++ A+ + +LS P ++ G++G
Sbjct: 20 RRPLRLVARTITKAWEGNIFSEAAEAAFWQVLSFPPLLLGLLGSIGYVGEWFGPEVVQAV 79
Query: 59 VPTVIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
++ + + IT + Q+L V + ++ L + + S+ + + ++
Sbjct: 80 RDKIVSTCRTIFSGDVVNGVITPTVDQILTVGKGEIVSVGFLISLWAGSSAMASFVDAVT 139
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+ +R R+ + +++ V L+I V P L +
Sbjct: 140 VAHGQYGVRHEVWQRIFALLLYVVSLVLLIIGLPVLALGPDVLPRFLPDR-WQAVAEAWL 198
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ L + L ++ K + PG + +++ +V YI +T
Sbjct: 199 SAFYYPVIGVLLVLALATLYKLALPRKLPWHRLAPGAALAMVVFILSSVGLRLYIRWITT 258
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y LA+ + L+F++ +G+ +GA N+++
Sbjct: 259 TGYTYGALATPIAFLLFVFFIGLAITIGAYFNSAIQE 295
>gi|152995747|ref|YP_001340582.1| putative ribonuclease BN [Marinomonas sp. MWYL1]
gi|150836671|gb|ABR70647.1| putative ribonuclease BN [Marinomonas sp. MWYL1]
Length = 313
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/269 (15%), Positives = 95/269 (35%), Gaps = 7/269 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+F + Y I F + A+ ++LS+LL+ P I + F A + + T +
Sbjct: 35 FFLVFKRYGYLTITRFNHSNLSQKAAQLTLSSLLAAVPIITIIVGILSFTPALEAMQTQL 94
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + I L + +K L +A + + + S+ + +
Sbjct: 95 FQLIEQHLAPGSSDIVMPYLIKFSAQSKNLPAAGLVALVLTALLLLNSFESSVQSIWEIR 154
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R L + + L + ++ + + + + NLL + +
Sbjct: 155 KARKIRERLLTYWAILTLGPIIFASSLSLYGTLISIQIHGTQTNAWIDNLLELGTITLYF 214
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L ++ P A+ + + I + +F+ + FS+Y +Y
Sbjct: 215 LMLLT-------LNFLTPNAEVSLKWASISALAGSIGLFILNTIFSSFAQFFSSYQVVYG 267
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASM 272
A+I L++L + + L A++
Sbjct: 268 AFAAIPIFLIWLQSSWLIVLASICLCATL 296
>gi|253581551|ref|ZP_04858776.1| ribonuclease BN [Fusobacterium varium ATCC 27725]
gi|251836621|gb|EES65156.1| ribonuclease BN [Fusobacterium varium ATCC 27725]
Length = 419
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/262 (17%), Positives = 94/262 (35%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I A+E++ + + + LLS+ P +L +LG + + +
Sbjct: 27 IQRALENYKRANSALWVTSLCFYTLLSLVPIFAILFSLGSWLGVAENIIIHLSKYSPLNE 86
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E+I + + + L I L+ + + S N ++V + R
Sbjct: 87 EMITFLVQFSENLLENARSGVLAGIGFLSLGWTLITMFSIVEKSFNDIWQVEKSRMILRK 146
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ LL + ++ ++ V I L + P ++F+
Sbjct: 147 ITDYIAFFLLFPLLILTINGGMVIIGKKLEGIYDISPY----------TLQIIPSFSIFL 196
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+++ +P K K++ IFT + + F H V TY+ +Y + I
Sbjct: 197 FFTALYMLIPNTKVKLIPAFFSAIFTSVLFSGLQYFFIHLQVMIITYNKIYGSFSVIFIF 256
Query: 252 LVFLYMLGVFFILGAELNASMI 273
+L ++ F ILGA L+ +
Sbjct: 257 FFWLKIMWFFIILGAHLSYFLQ 278
>gi|167820604|ref|ZP_02452284.1| putative ribonuclease [Burkholderia pseudomallei 91]
Length = 293
Score = 96.3 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 261 VLLMWLYFSAAVLLL 275
>gi|495247|emb|CAA52959.1| unnamed protein product [Erwinia chrysanthemi]
Length = 328
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/259 (16%), Positives = 91/259 (35%), Gaps = 11/259 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A + F + G + I+ + LS+ P ++ AGF+ + +I+ +
Sbjct: 43 HFIRAGDRFNDRMGNQFGAAITYFSFLSLIPILMVSFATAGFVLASNPDLLTGLINRIVN 102
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + L A Y N + LR +++ R V R
Sbjct: 103 SISDPSLARTLKNTVNTAVRHGTTVGLTGLLIALYSGVNWIGNLREAIHAQSRDVWERQP 162
Query: 129 Y------ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNG 180
+ + L F ++ + LVI F+ A A + + + L ++
Sbjct: 163 HEEEKIYLRYLWDFLSLIGLLLALVITLFLTSVAGSAQATIVRALGLNGIDWLRPVMTLI 222
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ +++ LP + +L G + I + T + +T S
Sbjct: 223 ALSISIFANYLLFLWILWVLPRHNPRRGPLLRGTLMAAIGFEALKFAMTVALPELAT-SP 281
Query: 241 MYAGLASIMTCLVFLYMLG 259
A S++ + F Y
Sbjct: 282 SGAAFGSVIGLMTFFYFFA 300
>gi|313837071|gb|EFS74785.1| putative ribonuclease [Propionibacterium acnes HL037PA2]
gi|314927900|gb|EFS91731.1| putative ribonuclease [Propionibacterium acnes HL044PA1]
gi|314971844|gb|EFT15942.1| putative ribonuclease [Propionibacterium acnes HL037PA3]
gi|328907359|gb|EGG27125.1| putative ribonuclease [Propionibacterium sp. P08]
Length = 417
Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 93/273 (34%), Gaps = 13/273 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
+ A F G A+ I+ +L++ P I F L G + + + V+D V
Sbjct: 16 HLLRAHTRFNRRLGNHFAASITYFTVLAIIPVIAFAFALLGLVLSRLSPYLLNQVVDSVV 75
Query: 68 GAW--PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY----- 120
P + + + F +S L A + V +R + +
Sbjct: 76 SLATEPSDKQQIRAIIENAMKVGGSVWAFVVSILTALWAGIGWVGNIRKGIQAEWAPDFD 135
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIW 178
V + R + ++ L + ++ + + + ++
Sbjct: 136 MVADDRGFVRAKVSDMLAFLGLLLVTLLTIITSQIGSSLAGMLARRTGLDSVPGHGWLLT 195
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ AT +A ++ IF++ +P K+ IL G + + + V + + F++
Sbjct: 196 LAGLLATTIAGWLLFIFLYTVMPRVKTSWRPILKGSLVAGFALALVQVGAGYLVQAFNS- 254
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ SI+ ++ ++ + A A+
Sbjct: 255 NKAVQAFGSIIIVMLVFDLVARLILFIASWIAT 287
>gi|224585837|ref|YP_002639636.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224470365|gb|ACN48195.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 287
Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 70/221 (31%), Gaps = 10/221 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R + + + + L + + + +L +I N
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLR--------WASDLNTVIDNVL 181
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+L +I ++ +P + L G + +
Sbjct: 182 RILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLFE 222
>gi|330833243|ref|YP_004402068.1| ribonuclease BN [Streptococcus suis ST3]
gi|329307466|gb|AEB81882.1| ribonuclease BN [Streptococcus suis ST3]
Length = 309
Score = 95.9 bits (237), Expect = 6e-18, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ D + ++ L+S+FP ++ ANL + V ++ VV P+ +
Sbjct: 17 FFSFYRSADSDVTSVAVAYYLLISIFPILLTLANLLPYYPFD--VDMILSVVAEFVPDKL 74
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I VL P+ IS L + S + L+ + N+AY + E R + I LI
Sbjct: 75 YPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLI 134
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ V +++ + +Y+ K P L + + ++ALF L+
Sbjct: 135 GIFLGIGLQVIILLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFAALV 194
Query: 195 FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM--TC 251
++ FLP + K+ + PG +F ++ LF+ Y+ ++ + + +++
Sbjct: 195 MLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVF 254
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + I+GA +NA++ +
Sbjct: 255 MLWFIFMAQVLIIGAMINATVQSMQVEE 282
>gi|297203233|ref|ZP_06920630.1| ribonuclease BN [Streptomyces sviceus ATCC 29083]
gi|197711317|gb|EDY55351.1| ribonuclease BN [Streptomyces sviceus ATCC 29083]
Length = 347
Score = 95.9 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/271 (16%), Positives = 105/271 (38%), Gaps = 14/271 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ D + +E +A+ + +LLSV P ++ L G++ ++ +
Sbjct: 2 LKDTVNSCIEYRILGLAAEAAFFSLLSVPPLLLSLIGLLGYVDDWTGTDSISSLEANLLD 61
Query: 72 EVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + V+ + ++ L A + S V ++ Y +
Sbjct: 62 AARTVLSDKGVREIAQPILDDVMKGGRPDVISVGFLFALWSGSRAVNVFIDTITVMYGLD 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+R TRL++F + A + + + VA P A+ + + ++
Sbjct: 122 GVRGIVKTRLVAFALFVAALLIGSVALPLMVAGPDAVVRIVPW------STTVVQVLYWP 175
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ L ++ +S + +PG + WV+G+ L Y+ + +T+Y
Sbjct: 176 VVIILSIAFLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRIYLQSTIEGATIYG 235
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA+ + L+++ + ++GA +NA++
Sbjct: 236 SLAAAVAVLLWIGVSAFAVLVGAAMNAAIDR 266
>gi|77166177|ref|YP_344702.1| ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|254435572|ref|ZP_05049079.1| YihY family protein [Nitrosococcus oceani AFC27]
gi|76884491|gb|ABA59172.1| Ribonuclease BN [Nitrosococcus oceani ATCC 19707]
gi|207088683|gb|EDZ65955.1| YihY family protein [Nitrosococcus oceani AFC27]
Length = 294
Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/266 (16%), Positives = 89/266 (33%), Gaps = 2/266 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ I F G +A I+ ALLSV P + + +
Sbjct: 18 FLSRVISGFRANQGLLLAGAIAYYALLSVVPMFALILVGLSQIIDPEQLLEATHDYLALL 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A+ +T +I + L K + + L +FSS L +++ +
Sbjct: 78 APGQAEILTQQIAEFLEN-WKLIGVVGFLVLLFFSSMAFTVLENAMSVIFFHRVAIHRRH 136
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA-TMLAL 189
+ + + + + V + + P LGN+ + IY +L
Sbjct: 137 FLVSAILPFCYLFLLGLGLFVVTLVSSALHTLDDRTVPLLGNIFGSYYAIGIYIVGLLGE 196
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++L +P + G + + W + Y T S + +Y A+++
Sbjct: 197 VLLLTSLYLVMPVGRIVFRHAFIGGMVATLLWELTRQALVWYFSTLSFVNIIYGSFAAVV 256
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
L+ L + + GA++ A
Sbjct: 257 MILLSLEAAAIIVLFGAQVIAEYERL 282
>gi|116516563|ref|YP_816069.1| ribonuclease BN, putative [Streptococcus pneumoniae D39]
gi|116077139|gb|ABJ54859.1| ribonuclease BN, putative [Streptococcus pneumoniae D39]
Length = 286
Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 55/281 (19%), Positives = 117/281 (41%), Gaps = 7/281 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSINFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +++S F+ + + LA + ++ G + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQFLFAFALFLILFGQMILALLAHYWTKDGIIYQALQ 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPA-AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
LF L+ ++ FLP + KI LPG F + + LF+ Y+ +
Sbjct: 179 GLAGPLIYALLFAILVMLYYFLPNLSNRKISYTLPGSAFVLLVILGVLTLFSSYLNYYVH 238
Query: 238 YSTMYAGLASI--MTCLVFLYMLGVFFILGAELNASMIIYY 276
+ L S+ + + + ++ ILGA +NASM
Sbjct: 239 HLVDVRILGSVLLVVMMFWFILIAKIVILGAVINASMQSLK 279
>gi|284047276|ref|YP_003397616.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283951497|gb|ADB54241.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 290
Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 100/264 (37%), Gaps = 2/264 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ E + ++ ++ + LLS+FPF++ + G + + I
Sbjct: 13 LQHLKLLWRMAYEANVTGLSGMVAYNLLLSIFPFVLLVLFVVGQVVRSEATEASIVNEIQ 72
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A+ L + A + ++ + + ++ A+ + R Y RSW
Sbjct: 73 RLFPQAAESSVRNTLATVRDNATSIGIVALVGGIWVGTSFWGAMDTAFCRIYD-SPCRSW 131
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYATML 187
+L + +++A++ L + L + P L N I +
Sbjct: 132 VKQKLFALAMLVVAALFLAASVALPALQAAVLVGAGEVLPFGLANWHAFTLGLGIAGGVT 191
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
LF +++ +P+ +I PG + + + F Y+ ST ++ +GL
Sbjct: 192 VLFAVTCVIYVAVPSGALPWRAIWPGALLATLGVTLVNWAFPFYLTDVSTIGSLGSGLGF 251
Query: 248 IMTCLVFLYMLGVFFILGAELNAS 271
++ LV+ Y++ +LG LN+S
Sbjct: 252 LLIVLVWFYVVAFVLLLGGVLNSS 275
>gi|254516307|ref|ZP_05128366.1| ribonuclease BN [gamma proteobacterium NOR5-3]
gi|219674730|gb|EED31097.1| ribonuclease BN [gamma proteobacterium NOR5-3]
Length = 479
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 26/226 (11%), Positives = 74/226 (32%), Gaps = 7/226 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT- 61
+ + ++ + F +E+ ++ ++ + S+ P ++ AG + V
Sbjct: 17 KQLEFFWTVLKQSAARFTQEEVLNRSAALAFYMMFSLPPMLLIMLWTAGSIHDEAAVNEA 76
Query: 62 VIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + E A+ + + + P+ I + +S + ++ +LNR +
Sbjct: 77 ICAEIGKLVGEDGARQLMTTVEGLRLEEPSWWATLIGVGTLVFSASTVLITMQDALNRIF 136
Query: 121 RVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
W + R +LA++ L++ + V ++
Sbjct: 137 GAPRTEGGKLGLWRMLRDHVLSGAMLATIGLILSVSLAVNALISALGRLLERWLGPVASW 196
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISW 221
++ + + I + +LP + G + T +
Sbjct: 197 LLALDFVLVKLAGFTILFALLFRYLPDVRIARKDTWFGALLTAGLF 242
>gi|163755561|ref|ZP_02162680.1| probable ribonuclease [Kordia algicida OT-1]
gi|161324474|gb|EDP95804.1| probable ribonuclease [Kordia algicida OT-1]
Length = 296
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 44/287 (15%), Positives = 109/287 (37%), Gaps = 10/287 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
R + ++ + + + + ++ ++ ++LS+ IV N+ G + G
Sbjct: 8 RFKLLDLPSLLVATSKSWFNSEPFERSAVVAYYSILSLPALIVIIINVVGSIWGKELVQG 67
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRA 119
++ + A A+ I I+ + +I Y S+ ++ +L++
Sbjct: 68 ELLAQIAKALGSETAESIRLMIVDRGETTTSIVATSIGIGTLIYGSTGVFFQVQNALDKI 127
Query: 120 YRVVEMRSW-----YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ +RL SFG++L+ L+I + A+ ++++ +L+
Sbjct: 128 WDAQPRFKNGLVETIFSRLKSFGFILIIGFLLLISFVLTSALSAFSENLKQYIS--PSLV 185
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ I+ ++L +++ + LP A ++ G T + +V G L Y
Sbjct: 186 EYAFVLDIFVSLLMIYVLFAAMFKILPNASIPWKAVRIGAALTSLLFVGGKYLLALYFSE 245
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ Y +I+ ++++ + GA Y +K+P
Sbjct: 246 L-QPGSTYGAAGAIILVMLWVSYSSLILFFGAHFTKIYSEKYLKKQP 291
>gi|167923558|ref|ZP_02510649.1| putative ribonuclease [Burkholderia pseudomallei BCC215]
Length = 289
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 19 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 78
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 79 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 138
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 139 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 198
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 199 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 257
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 258 VLLMWLYFSAAVLLL 272
>gi|145589162|ref|YP_001155759.1| putative ribonuclease BN [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047568|gb|ABP34195.1| tRNA-processing RNAse BN [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 282
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 93/270 (34%), Gaps = 7/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVV 66
+ + E ++ +A ++ + LS+ P + L +L Q + +
Sbjct: 10 WLSLAKEIWERNRGQNLNQIAGGLAFTTTLSLVPMVTIATILISYLPKVIQIKNAFKNWL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ L + A+GL + ++ + + + + N+ ++V R
Sbjct: 70 LETYMPGGLNEQVFIYLDQFSAQARGLTLLGLISLFITAIMTLSVIESAFNQIFKVKLRR 129
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I +L + L + ++ + A ++ A +
Sbjct: 130 PLHKKVAIYATATILGPILLGLGVYLSGILFSAAE------GWTDSVSAGFKLIATIAPI 183
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ I V+ LP A+ + G F +S+ F ++ + Y T+Y A
Sbjct: 184 ILAIIVYTVVYKVLPYAQISLSDAFSGGFFAALSFEAMKFGFAIFLTHTAFYKTVYGAFA 243
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ L+++Y+ + GA L A++
Sbjct: 244 ILPLALLWIYLTWWITLAGAVLVANLPSIR 273
>gi|240169089|ref|ZP_04747748.1| integral membrane protein [Mycobacterium kansasii ATCC 12478]
Length = 346
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/270 (14%), Positives = 100/270 (37%), Gaps = 8/270 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDV 65
FD A + F E G A+ ++ + ++FP ++ G + GF + + + D
Sbjct: 19 WFDHAVRAYKRFSERRGGFFAAGLTYYTIFALFPLLMVGFAVVGFTLSRNDRLLNMTYDR 78
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P + + D + + + I AA+ + LR++L+ +
Sbjct: 79 IRALVPGAFGQQLIDLVNSAIDA-RASVGVIGLATAAWAGLGWMSHLRVALSEMWAHPVE 137
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLLLIIWNGR 181
Y+ +S ++ + + + + A+ P+A A P L I
Sbjct: 138 LGNYVRNKLSDLAAMVGTFVVTMATIALTALGYLRPMATALKWLGIPEFSLLDWIFRAIS 197
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +++ ++ ++ LP + ++ + + + + + + + Y+ T S
Sbjct: 198 VVLSVVVSWLLFTWMIARLPRQSGRFVTSMRAGLIAAVGFELFKQVGSIYLRTVL-RSPA 256
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ +VF Y+ + A+
Sbjct: 257 GATFGPVLGLMVFAYVTAYLVLFSTAWAAT 286
>gi|223040120|ref|ZP_03610400.1| ribonuclease BN [Campylobacter rectus RM3267]
gi|222878597|gb|EEF13698.1| ribonuclease BN [Campylobacter rectus RM3267]
Length = 285
Score = 95.5 bits (236), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 96/273 (35%), Gaps = 12/273 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVF 67
I A+ ++ AS +S +LS+ P ++ +L + + + + + + +F
Sbjct: 13 LKIWLTAMLKIKDKQLLHYASSLSFHTMLSIIPVLLISLSLFTQMPSFRVYYTKIKEFIF 72
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ I++ I L + L + A + S +NR R
Sbjct: 73 AQLLPSNQEAISNYIETFLQNSS-SLGILGLGAIIFTSIMFFADYEYVINRIMHT-SSRK 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ + + + LA + L + ++ L + N L
Sbjct: 131 FWNSLSAYWTLITLAPLGLGLSFYLSNLFQDMLN---------SSAYTKWINFLSIFPYL 181
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ +L + + + L + W +G +F Y TY ++Y +
Sbjct: 182 IIWAIFCVTYLISINRQIALKNALFSSFVASLIWYLGKNIFVFYAANNKTYLSIYGSFSV 241
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ V++Y+ + F+ G +L A + +K
Sbjct: 242 VLLFFVWIYVSWIIFLYGVKLCAYLEKAGDNEK 274
>gi|152993707|ref|YP_001359428.1| ribonuclease BN [Sulfurovum sp. NBC37-1]
gi|151425568|dbj|BAF73071.1| ribonuclease BN [Sulfurovum sp. NBC37-1]
Length = 271
Score = 95.1 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 97/275 (35%), Gaps = 12/275 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFV 59
M++ F + + D + F+++ AS +S + + S+ P +V + L +
Sbjct: 1 MKKIFGAYYIFLRDFFKDFLDDRLGYYASSLSWNTIFSIIPLLVILLYVFTTLPLFHEMY 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V ++F +K I + I +A + L + A + + ++ +N
Sbjct: 61 DKVQQLIFANLMPTQSKEIMEYINTFIAN-SDKLGIVGAFYVTFAAIMFFKSYDYIVNDI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + R + ++L + ++ I L N + +
Sbjct: 120 FEL-PSRGILKSIKTYLLLIVLLPTMMGASFYLSTLIQSYLD---------RNEITSAIH 169
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ + + + L + W + F Y++ TY+
Sbjct: 170 LYSVIPYIIIWSAFYIAYQLSANTTIRKRAALTSSFIASLIWYLSKSGFVFYVMHNKTYT 229
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++Y +++++ L+++Y+ F+ G +
Sbjct: 230 SVYGSISTVLFFLLWIYISWAIFLHGLRFCYLLNK 264
>gi|254387231|ref|ZP_05002495.1| integral membrane protein [Streptomyces sp. Mg1]
gi|194346040|gb|EDX27006.1| integral membrane protein [Streptomyces sp. Mg1]
Length = 333
Score = 95.1 bits (235), Expect = 9e-18, Method: Composition-based stats.
Identities = 30/265 (11%), Positives = 90/265 (33%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ I+ + L++FP I A + L + + + +
Sbjct: 32 HAWRSYERLDRVHWTRLAAAITFISFLALFPLITVAAAVGAALLSQDQLDKLEKNLSQQV 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY--RVVEMRSW 128
P + + + ++ A + ++ + + V A+R L + + +
Sbjct: 92 PGISDQLDINGLV----ANAGTVGLVAGAILLFAGISWVGAMRDCLRAVWDKDDEDQGNP 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRIYATM 186
+ +L + + + A+ + + + ++ +
Sbjct: 148 VARKGKDTLVLLGLGAAGLASAAASIIGASAVGKFGGWLGIPPHGVGGGVLRAAAFLVGV 207
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+A F+ L++V LP + ++ + + + +L + Y+ + S MY
Sbjct: 208 VAAFLLLLYVLTLLPGVEPPRGRLIQAALIGAAGFELLKLLLSGYMREVAAKS-MYGAFG 266
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + + A+
Sbjct: 267 VPIALLLWINFTAKLLLYCSAWTAT 291
>gi|322387480|ref|ZP_08061090.1| ribonuclease BN [Streptococcus infantis ATCC 700779]
gi|321142009|gb|EFX37504.1| ribonuclease BN [Streptococcus infantis ATCC 700779]
Length = 287
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 117/271 (43%), Gaps = 5/271 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + + + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIVVNILPYFQIP--ISNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + + + +VL P+ GL + + L+A + S ++ L+ + N+AY V + R
Sbjct: 71 PDTIYEVVAKIVREVLTQPSTGLLSFAILSALWTFSKSMDFLQKAFNKAYGVAKNRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ + + L ++ ++ + L + + LF
Sbjct: 131 HQLMSLLVSFGLQILFALALFLSMFGHMLLDLLKNYWKSESALFSYLQDFTGPLIYAFLF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+I ++ FLP K KI ++PG +F ++ + +F Y + Y +SI+
Sbjct: 191 ATVIMLYYFLPNVKVSKIRYVIPGSLFVLVTTIALLNIFAAYFNNYVNYLVDVRFFSSIV 250
Query: 250 TC--LVFLYMLGVFFILGAELNASMIIYYWR 278
+ + ++ I+GA LNAS+
Sbjct: 251 VVVMMFWFIIIAKILIIGAVLNASVQSLKDP 281
>gi|290473340|ref|YP_003466206.1| hypothetical protein XBJ1_0257 [Xenorhabdus bovienii SS-2004]
gi|289172639|emb|CBJ79408.1| putative membrane protein [Xenorhabdus bovienii SS-2004]
Length = 285
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 94/281 (33%), Gaps = 11/281 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
M F + A + F + G + I+ + LS+ P ++ +AGF+
Sbjct: 1 MPRDFVPFIAHLIRAAQRFNDRMGSQFGAAITYFSFLSLIPILMLSFAIAGFVLASNPDL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ +I+ + + + + + A Y N V LR ++
Sbjct: 61 LTRLINGIANSISDPSLANTLKNSVDTAVNQRTTVGLTGLAIALYSGVNWVGNLREAILA 120
Query: 119 AYRVVEMRSW------YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--AL 170
R V R Y + F + LVI + A A + F +
Sbjct: 121 QSRDVWERHHAEKEKIYSQYIRDFFSLFGLLFALVITLSLTSIAGSAQATLVHAFGLEGI 180
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
L + ++ A ++ +++ LP + + ++ G + I + + + T
Sbjct: 181 EWLRPAWTLIGMTISISANYLLFLWILWILPRHQPERKALFQGTLMAAIGFEIIKYIMTI 240
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ ++ S A S++ + F Y + A A+
Sbjct: 241 MLPKLAS-SPSGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 280
>gi|254521889|ref|ZP_05133944.1| ribonuclease BN [Stenotrophomonas sp. SKA14]
gi|219719480|gb|EED38005.1| ribonuclease BN [Stenotrophomonas sp. SKA14]
Length = 305
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/274 (20%), Positives = 99/274 (36%), Gaps = 19/274 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ FVE D A+ +S ALLS+ P +V L L +I +
Sbjct: 24 MAVAKRFVEIDVLTQAASVSFYALLSMAPLLVLLLWLTASL-YPPAQQALIGQIGSVAGS 82
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
+A + + P+ G S L ++ L+ +LNR + R
Sbjct: 83 SVASVADTVLHNANSQPSMGSLAGLWSTLLLFVGATAVFAQLQNALNRIFHTSGQRLDGI 142
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG VL L++ A+ + A + P +
Sbjct: 143 KAWLRKRVFSFGVVLALGFLLILSMTATTALQVVFAQLPSVLP----------AIGYLTS 192
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + F++ +LP + G T + +G YI T + S Y +
Sbjct: 193 LLLYTLAFAFLYHYLPDRRVAWRQAFIGGAITSALFALGRYGIGVYIATVAPGSA-YGSM 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ LV++Y F +GA + A + + +
Sbjct: 252 GALVISLVWIYYATAVFFVGALMTAVIDERLYAR 285
>gi|227505568|ref|ZP_03935617.1| tRNA-processing ribonuclease BN [Corynebacterium striatum ATCC
6940]
gi|227197865|gb|EEI77913.1| tRNA-processing ribonuclease BN [Corynebacterium striatum ATCC
6940]
Length = 380
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/287 (16%), Positives = 96/287 (33%), Gaps = 18/287 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---GAHQFVPTVIDVVF 67
++ F A+ ++ +L+ P ++ ++A + Q D +
Sbjct: 56 VVRRVRYEFFMNAMMDRAATLTFFTVLTALPMVLGVYSIATLVLARNEEQVQKLTADFIG 115
Query: 68 GAWPEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
P A + V + + +S + A SS V A S N Y VE
Sbjct: 116 TYLPPEWADAAQRIVDAVVGSTQQSTLMLVLSVVLALSSSSAYVRAFARSANAMYGRVEG 175
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL-----------GNLL 174
R T + + + + V++ + + + + F + + L
Sbjct: 176 RGLVRTWTVMWLLTIAMVLGAVVIFVALMLQRDIVVGLLRPFGGVAGVSSVRSFLVDSFL 235
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ R + L ++ F P + K + G + VV L Y+
Sbjct: 236 PVWQWLRWPVVAVMSVTLLALLYRFAPNVRTRKFQWLTVGSTIALLGAVVAWGLVRVYLT 295
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S Y L +++ L L+++ FILG +++A + ++
Sbjct: 296 VVGARSA-YGALGTVIIALFVLWIMNTLFILGVKIDAEITRAMELER 341
>gi|213850453|ref|ZP_03381351.1| hypothetical protein SentesT_02320 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 330
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/258 (14%), Positives = 88/258 (34%), Gaps = 11/258 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ A E F + G + I+ + LS+ P ++ AGF+ + + +
Sbjct: 58 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILM 117
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-- 126
+ + + + A Y N + LR ++ R V R
Sbjct: 118 NVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKP 177
Query: 127 ----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNG 180
++ L F ++ + L+I + A + + ++ L
Sbjct: 178 QDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLI 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + + S
Sbjct: 238 GLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SP 296
Query: 241 MYAGLASIMTCLVFLYML 258
A S++ + F Y
Sbjct: 297 SGAAFGSVLGLMAFFYFF 314
>gi|289641087|ref|ZP_06473255.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
gi|289509028|gb|EFD29959.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
Length = 375
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 91/273 (33%), Gaps = 9/273 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVP 60
D + E+ G +A+ + A LS FP + ++ GF+
Sbjct: 23 RRRRPFVDHAVRGYRRYAEDGGDRLAAAATYFAFLSFFPLVALAFSITGFVVDAYPNVQQ 82
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + P + K I G+ I A + ALR ++ +
Sbjct: 83 GLANQINSYLPGMADKLDIASI----GNSKVGVGLIGLAALLLAGLAWINALRDAIRIIW 138
Query: 121 RV-VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
V++ + + RL G ++ + + V I + G+ +
Sbjct: 139 HQSVDVGNALVRRLRDLGVLVGLGLIVFASIAVTSVITSVSGTFLEGIGLSGSTAATVLT 198
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + +F+ LFL + G + + L ++V +T
Sbjct: 199 TLLALGIALALDVTVFLCLFLWLPSITDRRRAVRGALLGAVGVESLK-LLGTWLVGMTTD 257
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ +Y A I+ L+++ ++ + +L A +
Sbjct: 258 NPVYGTFAVIVGLLIWINIVLRWTLLVAAWTVT 290
>gi|126737832|ref|ZP_01753562.1| ribonuclease BN, putative [Roseobacter sp. SK209-2-6]
gi|126721225|gb|EBA17929.1| ribonuclease BN, putative [Roseobacter sp. SK209-2-6]
Length = 248
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 84/243 (34%), Positives = 135/243 (55%), Gaps = 4/243 (1%)
Query: 34 SALLSVFPFIVFGANLAG----FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVP 89
S +L++FPF++F LAG + + ++D+VFGAWP ++ PI E+ VL
Sbjct: 2 SMMLALFPFVLFTVALAGAVANLVSHELRLQQLVDLVFGAWPTEVSGPILRELYAVLETS 61
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
+ GL T + A +F+SNGV A+R ++ RAY ++ R ++++RLI G V+L ++I
Sbjct: 62 SPGLATFGGVLALFFASNGVNAIRFAMVRAYHDLDERPFWLSRLICLGLVILGGSGILIA 121
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS 209
+ +AIPL +AY + FP + L + + F+ ++ HLFLP I
Sbjct: 122 AVFEIAIPLYVAYFSELFPQVELLNGLGKGMNRALILGMPFLAVLLCHLFLPGRIHPIRE 181
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
ILPGV+ T W + + F Y+ + + YS YAGLA + ++FLY+ ILGAE N
Sbjct: 182 ILPGVLVTAFLWWIAGIGFAFYVTSIAQYSATYAGLAGAIAAIIFLYVNAAILILGAEFN 241
Query: 270 ASM 272
++
Sbjct: 242 GAL 244
>gi|253998784|ref|YP_003050847.1| ribonuclease BN [Methylovorus sp. SIP3-4]
gi|313200870|ref|YP_004039528.1| ribonuclease bn [Methylovorus sp. MP688]
gi|253985463|gb|ACT50320.1| ribonuclease BN [Methylovorus sp. SIP3-4]
gi|312440186|gb|ADQ84292.1| ribonuclease BN [Methylovorus sp. MP688]
Length = 309
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 92/289 (31%), Gaps = 15/289 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
Y + + AI + + + ++ + S+ P +V + G+ Q
Sbjct: 13 RYLNCMRQLFTSAIVAWFAHRATSKGAALAFYTIFSLTPILVLVIAVTGYFLGEQSAQGH 72
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF--SSNGVEALRISLNRAY 120
+ + +L G+ A F ++ L+ SL+ +
Sbjct: 73 VVAELSMLVGDSGARVISSLLAASHNHTSGIIASVVAALLIFIGATTVFAELKASLDEIW 132
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVI------------MSFVFVAIPLALAYVRKFFP 168
V + L S L+I + + + A ++ +
Sbjct: 133 EVEKAVVSNKHAFKQLLITRLTSFGLIIILSALLMSSLLASAGLGLIEHYANYFLGGYLD 192
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
L + I + + V+ LP + ++ G + T + + +G +L
Sbjct: 193 FLLQHMAIFKYISTLLSFAVITAMFAVVYKMLPDVRLSWSDVVVGAVLTALLFGLGKLLI 252
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y+ S S+ + S++ L+++Y F GAE+ + Y
Sbjct: 253 GMYLSR-SGISSSFGAAGSLIALLLWIYYSAQIFFFGAEVTRQFALTYG 300
>gi|223933150|ref|ZP_03625142.1| ribonuclease BN [Streptococcus suis 89/1591]
gi|223898211|gb|EEF64580.1| ribonuclease BN [Streptococcus suis 89/1591]
Length = 309
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/268 (19%), Positives = 114/268 (42%), Gaps = 5/268 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ D + ++ L+S+FP ++ ANL + V ++ VV P+ +
Sbjct: 17 FFSFYRSADSDVTSVAVAYYLLISIFPILLTLANLLPYYPFD--VDMILSVVAEFVPDKL 74
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I VL P+ IS L + S + L+ + N+AY + E R + I LI
Sbjct: 75 YPSVSSFITSVLTKPSSSWLGISILTTLWTLSRSMTILQKAFNKAYGINEHRDFIIGHLI 134
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ V +++ + +Y+ K P L + + ++ALF L+
Sbjct: 135 GIFLGIGLQVIVLLSITLLTFGQAVFSYINKLVPIEDAWLKGLLSQTQLVGLMALFAALV 194
Query: 195 FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM--TC 251
++ FLP + K+ + PG +F ++ LF+ Y+ ++ + + +++
Sbjct: 195 MLYFFLPNVRIKKVRYVFPGTLFVLLTMTSIGKLFSIYVDNYANKLLDFRIVTAVVFLVF 254
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ + I+GA +NA++ +
Sbjct: 255 MLWFIFMAQVLIVGAMINATVQSMQVEE 282
>gi|54308367|ref|YP_129387.1| hypothetical protein PBPRA1174 [Photobacterium profundum SS9]
gi|46912795|emb|CAG19585.1| putative membrane protein [Photobacterium profundum SS9]
Length = 308
Score = 95.1 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/272 (15%), Positives = 91/272 (33%), Gaps = 11/272 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + A + F + G + I+ + LS+ P ++ AGF+ + +ID +
Sbjct: 22 DHLLRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFVLASNSDLLTGLIDKIV 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR- 126
+ + + + A Y + + LR ++ R V R
Sbjct: 82 TGVTDPSLAKTLENTVNTAINQRTTVGLSGLAIALYSGISWMGNLREAIRAQTRDVWERK 141
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWN 179
++ F + L+ + A + + + L +
Sbjct: 142 PEDKDHLFLQYGKDFIALTGLVAALIFTVALTSVAGSAQKTIVEALGLGGITWLRPALTM 201
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A ++ +++ LP K + ++L G + I + V T + + + S
Sbjct: 202 IALTISITANYLMFLWIFWMLPKKKLETRALLQGTLLAAIGFEVIKFAMTMILPSLAK-S 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A SI+ + F Y + A A+
Sbjct: 261 PSGAAFGSIIGLMAFFYFYARLTLFCAAWIAT 292
>gi|330446434|ref|ZP_08310086.1| putative membrane conserved inner membrane protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328490625|dbj|GAA04583.1| putative membrane conserved inner membrane protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 305
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 93/277 (33%), Gaps = 11/277 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVF 67
D A + F + G + I+ + LS+ P ++ AGF+ A + ++ID +
Sbjct: 22 DHFIRAADRFNDRLGSQFGAAITYFSFLSLIPILMVLFAAAGFILASNASLLNSIIDKIV 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR- 126
+ + + + A Y + + LR ++ R V R
Sbjct: 82 AGVTDPSLATTLKNTVNIAISQRTTVGLSGLAIALYSGVSWMGNLREAIRAQTRDVWERK 141
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLIIWN 179
+ + L F + L+ + A A + + L ++
Sbjct: 142 PEDKDHFLLQYLKDFVGLTGLVAALIFTVVLTSVAGSAQATIVHALGLEDITWLRPVLTA 201
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A ++ +++ LP + +++ G + + + T + ++ S
Sbjct: 202 TALTISICANYLMFLWIFWMLPKRRFNRWALMKGTLLAAVGFEAIKFAMTFMLPKLAS-S 260
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A SI+ + F Y + A A+ +
Sbjct: 261 PSGAAFGSIIGLMAFFYFFARLTLFCAAWIATANEHR 297
>gi|239928163|ref|ZP_04685116.1| integral membrane protein [Streptomyces ghanaensis ATCC 14672]
Length = 339
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/263 (17%), Positives = 101/263 (38%), Gaps = 14/263 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA---- 75
+E +A+ + LLSV P ++ L G++ A T+ V
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLSLIGLLGYVDAWTGADTIQSVQRNLLDASRTVLSD 60
Query: 76 ----KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + V + ++ L A + S V ++ Y + +R T
Sbjct: 61 RGVKEIAEPILRDVTKGGRPDVISLGFLIAVWSGSRAVNVFIDTITVMYGLDGVRGIVKT 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL++F ++A + + + VA P A+ + + ++ +L
Sbjct: 121 RLLAFLLFIVALLIGSVALPLMVAGPDAVVRIVPW------STTLVQILYWPVVILLSVA 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ +S + +PG + WV+G+ L Y+ + T+Y LA+ +
Sbjct: 175 FLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRLYLTSTVEGPTIYGSLAAPVAV 234
Query: 252 LVFLYMLGVFFILGAELNASMII 274
L+++ + ++GA +NA++
Sbjct: 235 LLWIGVSAFAVLVGAAVNAAIDR 257
>gi|302557583|ref|ZP_07309925.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302475201|gb|EFL38294.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length = 304
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 100/263 (38%), Gaps = 14/263 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI----- 74
+E +A+ + LLSV P ++ L G++ T+ +
Sbjct: 1 MEYRILGLAAEAAFFTLLSVPPLLLSMIGLLGYVDDWTGADTIQSLQRNLLDASRTVLSD 60
Query: 75 ---AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
++ + V + ++ L A + S V ++ Y + +R T
Sbjct: 61 RGVSQIAEPILRDVTKGGRPDVISLGFLIAVWSGSRAVNVFIETITVMYGLDGVRGIVKT 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL++F ++A + I + VA P A+ + + ++ ++
Sbjct: 121 RLLAFLLFIVALLIGSIALPLMVAGPDAVVEIVPW------STTVVQILYWPVVLVLSVA 174
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L ++ +S + +PG + WV+G+ L Y+ T+Y LA+ +
Sbjct: 175 FLTTLYHVSVPVRSPWIEDVPGALVALAMWVLGSFLLRIYLTNTVEGPTIYGSLAAPVAV 234
Query: 252 LVFLYMLGVFFILGAELNASMII 274
L+++ + ++GA +NA++
Sbjct: 235 LLWIGVSAFAVLVGAAVNAAIDR 257
>gi|297562886|ref|YP_003681860.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296847334|gb|ADH69354.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 374
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/273 (17%), Positives = 94/273 (34%), Gaps = 7/273 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
D + A E + + +G +A ++ A LS FP + G+L V
Sbjct: 27 RRRRPALDHLVRAYERYADRNGNQLAGAVTYFAFLSFFPLLALAFAAVGYLA--AVQVEV 84
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY-- 120
D + A V+ + +A G I L Y N V ALR +L+ +
Sbjct: 85 GDYLQQALDGVLPGLSEQLPIDEIAQARVGAGVIGVLGLLYAGLNAVSALREALHSIWLK 144
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIW 178
+ E + + +L +L L++ A ++ G+LL L +
Sbjct: 145 NLREGPNILLRKLADLLVMLGLGAALLLAVAFTSVAQTATQWLLGLVGLDGSLLANLSLR 204
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + A + + L + + G + + + V +
Sbjct: 205 ALALVIAVGANIVIFVLAFALLSGSGRPTRMMWRGALLGAVGFEVLKAAAAVLLAGTLG- 263
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ +YA A ++ LV++ ++ + A A+
Sbjct: 264 NPVYASFAVLVGLLVWINLVMRLVMFSAAWTAT 296
>gi|218440878|ref|YP_002379207.1| ribonuclease BN [Cyanothece sp. PCC 7424]
gi|218173606|gb|ACK72339.1| ribonuclease BN [Cyanothece sp. PCC 7424]
Length = 306
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/290 (14%), Positives = 101/290 (34%), Gaps = 20/290 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
+ + + ++ M + ++ L S+FP ++ ++ F ++ +
Sbjct: 16 QLFIRTLLKWQQDQCLEMGAALAYYVLFSLFPALLVILSIFSFFLGHDTDVYNQILKLAK 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P I D ++Q + + G + + +S+ L SL++ ++V ++
Sbjct: 76 EGLPYSAFIIIEDALIQ-MTKSSLGASIVGFSILFFSASHAFAFLSRSLDKIWQVQKIYP 134
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL------------- 174
+ + ++ + + L NLL
Sbjct: 135 HQQNVITIISTYIQYRFFAFLLLLGSSGVFVLLILFDIANKIFINLLENVEETKHLVQAY 194
Query: 175 --LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF--TH 230
+ + T L LF+ ++ V FLP+ K K I G + T I + L +
Sbjct: 195 ENFWLGKVQAVHTFLILFLIVMIVFKFLPSTKIKWGDIWLGSLLTAIILFLLQKLVSNSF 254
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ + Y + +M L+++Y+ F LG+E + ++
Sbjct: 255 IVINITRQFQYYGVIGGVMVLLLWIYLTCEIFFLGSEFTYIYAQLFGSRR 304
>gi|119468243|ref|ZP_01611369.1| tRNA processing exoribonuclease BN; required for maturation of tRNA
encoded by bacteriophages; dimer [Alteromonadales
bacterium TW-7]
gi|119448236|gb|EAW29500.1| tRNA processing exoribonuclease BN; required for maturation of tRNA
encoded by bacteriophages; dimer [Alteromonadales
bacterium TW-7]
Length = 197
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 72/181 (39%), Gaps = 6/181 (3%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+ + A + + + +LNR +R+ + R I+ + + + L V L V
Sbjct: 1 MTAVGIGFLAAVALLLIRNVDATLNRIWRIKKKRPMMISFAVYWMVLSLGPVLLGASIGV 60
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
I +++ + P +G I ++ +P + + +P
Sbjct: 61 TSYIVSLVSFADQGIPGFSGF------LLKLLPYGISMMGFIMLYTLVPNTRVSFKAAVP 114
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G +F + + + F YI F +Y +Y +A+I V++Y+ V +LGAE A +
Sbjct: 115 GALFAALLFELTKKGFALYISHFPSYEVIYGAVATIPILFVWVYLAWVVVLLGAEFTACI 174
Query: 273 I 273
Sbjct: 175 S 175
>gi|322391709|ref|ZP_08065176.1| ribonuclease BN [Streptococcus peroris ATCC 700780]
gi|321145419|gb|EFX40813.1| ribonuclease BN [Streptococcus peroris ATCC 700780]
Length = 287
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/271 (18%), Positives = 116/271 (42%), Gaps = 5/271 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + ++ D + ++ L+S+FP ++ N+ + + + +
Sbjct: 13 LLKAFLHYYQASDSELTSVAVAYYWLISIFPLLMIVVNILPYFQIP--ISNFLLTIKEFL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P+ I + + + +VL P+ GL + + L+A + S + L+ + N+AY + + R
Sbjct: 71 PDTIYEVVAKIVREVLTQPSTGLLSFAILSALWTFSKSMNFLQKAFNKAYGIAKNRGIIS 130
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+L+S + + F+ + + L ++ ++ + L + + LF
Sbjct: 131 HQLMSLLVSFGLQILFALALFLSMFGHMLLDLLKNYWKSESALFSYLQDFTGPLIYAFLF 190
Query: 191 IGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+I ++ FLP K KI ++PG +F ++ + +F Y + Y +SI+
Sbjct: 191 AIVIMLYYFLPNVKVSKIRYVIPGSLFVLVTTIALLNIFAAYFNNYVNYLVDVRFFSSIV 250
Query: 250 TC--LVFLYMLGVFFILGAELNASMIIYYWR 278
+ + ++ I+GA +NAS+
Sbjct: 251 VVVMMFWFIIIAKILIIGAVINASVQSLKDP 281
>gi|300811818|ref|ZP_07092288.1| YihY family protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497188|gb|EFK32240.1| YihY family protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 304
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 111/276 (40%), Gaps = 9/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + + + + + I+ L S+FP ++ N + + D +
Sbjct: 12 VRRFLTTLSSVVSQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHL--ATGPIADYLE 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-- 125
+P +A+ I + +L + + A+ A + S V A+RI +NR Y V
Sbjct: 70 MIFPSDVARYIIPIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKEL 129
Query: 126 ----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R ++ + L ++++ V V L ++ +F + + + R
Sbjct: 130 KLGFWHFIWNRTLTMIFSALMVTMFILLALVVVFGQEVLHFLAPYFNLPLAWIDKLSSYR 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + IG+ +++ P K ++LPG I T W + LF+ Y+ F
Sbjct: 190 WLVLLVLMLIGVYYLNAVAPNVHFK-KALLPGSIVTVAGWEALSYLFSFYLKNFPVKWEN 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L +L + + G +N S+ +
Sbjct: 249 YGIVGTFIIFMLWLNLLAILLLFGTAVNVSLDQLRY 284
>gi|300115314|ref|YP_003761889.1| ribonuclease BN [Nitrosococcus watsonii C-113]
gi|299541251|gb|ADJ29568.1| ribonuclease BN [Nitrosococcus watsonii C-113]
Length = 294
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 2/266 (0%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ I F G +A ++ ALLS+ P + A +
Sbjct: 18 FLVRVIVGFRANQGLLLAGAVAYYALLSLVPMFALILVGLSQVIASDQLLEATHDYLALI 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A+ +T +I + + K + + +FSS L +++ +
Sbjct: 78 APGQAEVLTQQIAEFVEN-WKVIGVVGFFVLLFFSSMAFTVLENAISVIFSHRVAIHRRH 136
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW-NGRIYATMLAL 189
+ + + + + V + + P LG++ + G +L
Sbjct: 137 FLVSAILPFCYLCLLGLGLFVVTLVSSALHTLDDRTVPVLGSIFGSYYAIGIYIVGLLGE 196
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++L +P + L G + + W + Y T S + +Y A+++
Sbjct: 197 ILLLTSLYLVMPVGRIAFRHALIGGMVATLLWELTRQGLVWYFSTLSFVNIIYGSFAAVV 256
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
L+ L + + GA++ A
Sbjct: 257 MILLSLEAAAIIVLFGAQVIAEYERL 282
>gi|167915718|ref|ZP_02502809.1| putative ribonuclease [Burkholderia pseudomallei 112]
Length = 287
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/255 (18%), Positives = 92/255 (36%), Gaps = 5/255 (1%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLGVFFIL 264
L++LY +L
Sbjct: 261 VLLMWLYFSAAVLLL 275
>gi|157151368|ref|YP_001450676.1| ribonuclease BN family protein [Streptococcus gordonii str. Challis
substr. CH1]
gi|157076162|gb|ABV10845.1| ribonuclease BN-family, putative [Streptococcus gordonii str.
Challis substr. CH1]
Length = 297
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/267 (19%), Positives = 107/267 (40%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I + + + + ++ L+S P ++ AN+ + +++++
Sbjct: 12 QFLRAFIGFYDKSEIGITSIAVAYYFLISALPLLLVLANILPYFQVQ--TDALLNLLNDM 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + + V P+ L S L+A + S + L+ + N+AY V +
Sbjct: 70 LPDSLYPMVAKAVRAVFGQPSSSLLGFSILSALWAFSKCISFLQKAFNKAYGVTKGHGLL 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL SF + + L++ + V L V F + I L L
Sbjct: 130 RNRLFSFVVSIGLQILLILSMILSVFGRSILTVVYNVFDLDVSFYRQITTITEGLVFLVL 189
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
F+ L+ ++ LP K K+ +LPG IF LF+ Y+ + + S+
Sbjct: 190 FLTLVALYYLLPNVKINKLRYVLPGTIFVVGILFGLLNLFSAYLEAYMNHFINVRFFGSV 249
Query: 249 --MTCLVFLYMLGVFFILGAELNASMI 273
+ +++ ++ I+GA LNAS+
Sbjct: 250 VAIIIMLWFIIVSKILIIGAILNASIQ 276
>gi|239815207|ref|YP_002944117.1| ribonuclease BN [Variovorax paradoxus S110]
gi|239801784|gb|ACS18851.1| ribonuclease BN [Variovorax paradoxus S110]
Length = 303
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/278 (14%), Positives = 97/278 (34%), Gaps = 6/278 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
+FD+ A+ + + +M + ++ + S+ P ++ ++AG G +
Sbjct: 3 IRALFDLCKQAVASWSNDYAPSMGAALAYYTVFSIAPLLLIVISVAGLVFGQEAARGEIF 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G A + + V + + ++ L+ +L+R +R
Sbjct: 63 AQLSGLMGAQGAAAVQGMLQAVNKPAEGIVATVVGLGLLVVGATTVFGELQDALDRIWRA 122
Query: 123 V---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + + + + ++ VA A + + P G +
Sbjct: 123 PARTKSKGLFNLLRVRLLSFSMIMAIGFLLMVSLVASAALAALSKWWAPVFGGWATLAQA 182
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + ++ +P + + + G T + + +G L YI S+ +
Sbjct: 183 VNFVFSFAMVTVIFAMIYKIMPRVRVQWRDVWVGAAVTALLFTIGKHLIGLYIGK-SSVA 241
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ Y S++ LV++Y F+LGAE Y
Sbjct: 242 SGYGAAGSLVVVLVWVYYSAQIFLLGAEFTWVYAKTYG 279
>gi|211638603|emb|CAR67222.1| similar to putative membrane protein yhjd of escherichia coli
[Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949]
Length = 341
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 95/271 (35%), Gaps = 11/271 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
A F + G + I+ + LS+ P ++ +AGF+ + +I+ +
Sbjct: 67 HFIRATLRFNDRMGNQFGAAITYFSFLSLIPILMLSFAIAGFILASNPDLLAKLINGIAN 126
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + A Y N V LR ++ + V +R+
Sbjct: 127 SISDPTLANTLKNSVDTAIKQRTTVGLTGLAIALYSGVNWVSNLRQAILAQFHPVWLRNQ 186
Query: 129 YITRLISF--------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ I F LL ++ + + A+ + L +
Sbjct: 187 EDEKKIYFKYIRDAISLIGLLLALVITLSLTSIAGSAQAIIVEILGLSGIEWLRPSWFLI 246
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +++A ++ +++ LP + + ++L G + I + V + T + ++ S
Sbjct: 247 GLAISIIANYLLFLWLFWVLPHHQPERKALLKGTLMAAIGFEVIKYIMTMTLPRLAS-SP 305
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A S++ + F Y+ + A A+
Sbjct: 306 SGAAFGSVIGLMTFFYLFARLTLFCAAWIAT 336
>gi|94986256|ref|YP_605620.1| ribonuclease BN [Deinococcus geothermalis DSM 11300]
gi|94556537|gb|ABF46451.1| ribonuclease BN [Deinococcus geothermalis DSM 11300]
Length = 393
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/285 (16%), Positives = 107/285 (37%), Gaps = 14/285 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
F +F +I A F ++ +A+ I+ A+ S+ P ++F +AGF + + V +
Sbjct: 3 FADLFGLIRGAALAFGQDKAPRLAAAIAYYAIFSIAPLLLFAVAVAGFFLSREAVLADLF 62
Query: 65 ----VVFGAWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ A + + L + ++ + ++ L+ +L+
Sbjct: 63 GPNGLISQNLGASTADFLKGLVKPDALQQGSITATLVAFVTLFLGATGLFVQLQDALSSM 122
Query: 120 YRVVEMRS-----WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ R++SF +L L+ + + +
Sbjct: 123 WGADPPPPGGFLKVVQARVVSFLLILSIGFILLTFLVLNTYLSAIAQSLGDRIGVG---A 179
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ G + ++L L ++ FLPA K + + G + T + + VG V Y+
Sbjct: 180 FFVRAGTLLLSVLLLTPVFALIYKFLPAVKLQWREVWVGSLVTAVLFTVGQVAIGFYLGR 239
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+T S+++ S++ L+++Y + F GAE+ +
Sbjct: 240 SAT-SSVFGVAGSLVALLLWIYYSAMIFFFGAEVTWVYSQKFGTH 283
>gi|262282974|ref|ZP_06060741.1| ribonuclease BN family protein [Streptococcus sp. 2_1_36FAA]
gi|262261226|gb|EEY79925.1| ribonuclease BN family protein [Streptococcus sp. 2_1_36FAA]
Length = 297
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 54/267 (20%), Positives = 108/267 (40%), Gaps = 5/267 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I + + + + ++ L+S P ++ AN+ + +++++
Sbjct: 12 QFLRAFIGFYDKSEIGMTSIAVAYYFLISALPLLLVLANILPYFQVQ--TDALLNLLNEI 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P+ + + + V P+ GL S L+A + S + L+ + N+AY V +
Sbjct: 70 LPDSLYPMVAKAVRAVFGQPSSGLLGFSILSALWAFSKCISFLQKAFNKAYGVTKGHGLL 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
RL SF + + L++ + V L V F + I L L
Sbjct: 130 RNRLFSFVVSIGLQILLILSMILSVFGRSILTVVYNVFDLDVSFYRQITTITEGLVFLVL 189
Query: 190 FIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS- 247
F+ L+ ++ LP K K+ +LPG IF LF+ Y+ + + S
Sbjct: 190 FLTLVALYYLLPNVKINKLRYVLPGTIFVVGILFGLLNLFSAYLEAYMHHFINVRFFGSV 249
Query: 248 -IMTCLVFLYMLGVFFILGAELNASMI 273
++ +++ ++ I+GA LNAS+
Sbjct: 250 VVIIIMLWFIIVSKILIIGAILNASIQ 276
>gi|313125785|ref|YP_004036055.1| membrane protein [Halogeometricum borinquense DSM 11551]
gi|312292150|gb|ADQ66610.1| predicted membrane protein [Halogeometricum borinquense DSM 11551]
Length = 355
Score = 94.3 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 87/268 (32%), Gaps = 15/268 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ + E MA I+ A +S+ P + +A +V +
Sbjct: 17 SLLRALVHEIRTEKLTFMAGSIAYHAFVSLLPLFLLLLAIAATFQNQTLDDSVRTLAGVV 76
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
E A + G+ + + L + + Y ++
Sbjct: 77 LTEGTRD--DFFAEATRATQSTGVSLFGGAVLLWGTLRIFRGLDTAFSDIYESEASNTFG 134
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+L ++ LVI S V A+ + + W +L L
Sbjct: 135 DQIRDGILVLLTLAIVLVIGSVVNDAVGTVSS------------GTVAWLIGRLFLILGL 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ L ++ P ++ ++PG + + V LF Y S + + +A I+
Sbjct: 183 SLALYPMYYVFPDTDVSLLEVVPGTLTAAVGLTVFESLFQLYTA-VSNTAPNSSVVAGIL 241
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
L +LY G+ +LGA +NA +
Sbjct: 242 VLLTWLYFSGLVILLGAAVNAVLSNRSR 269
>gi|332520404|ref|ZP_08396866.1| ribonuclease BN [Lacinutrix algicola 5H-3-7-4]
gi|332043757|gb|EGI79952.1| ribonuclease BN [Lacinutrix algicola 5H-3-7-4]
Length = 300
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/286 (16%), Positives = 109/286 (38%), Gaps = 10/286 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
+ + ++ A + + + ++ ++ A+LS+ I+ N+ G + G
Sbjct: 6 KFKLIQLPKLLAKAGSSWFKGKPFERSAIVAYYAILSLPALIIIILNIVGGIWGRDIVQG 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+++ + A A+ I I+Q + + + Y S+ L+ +L+
Sbjct: 66 ELLNEITKAIGPDTAESIRLMIVQKGSETTSVFATIVGVGTLIYGSTGVFFQLQSALDNI 125
Query: 120 YRVVEMRSW-----YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ ++RL SFG++L+ L+ + + + P NLL
Sbjct: 126 WESESNFENSIVATIVSRLKSFGFILIIGFLLLTSFILTSLLSTFNKRLENILP--ENLL 183
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ ++ +++ + FLP+AK ++ G + T + +++G L Y
Sbjct: 184 DFLFIFDFLISIGFIYLLFAAMFKFLPSAKISWKTVKVGALLTTVLFLIGKYLLAIYFSE 243
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ Y SI+ ++++ + + GA Y KK
Sbjct: 244 M-EPGSTYGAAGSIILIMLWVSYSSLILLFGAHFTKIYSDEYVNKK 288
>gi|91788955|ref|YP_549907.1| ribonuclease BN [Polaromonas sp. JS666]
gi|91698180|gb|ABE45009.1| ribonuclease BN, putative [Polaromonas sp. JS666]
Length = 302
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 97/267 (36%), Gaps = 4/267 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F G +A ++ ALLS+ P ++ A + + + G
Sbjct: 21 FALRVLKGFRANQGLLLAGAVAYYALLSIVPLLILMAIALSHVIDQSALLEALGRYIGWL 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR---AYRVVEMRS 127
++ I E+ L + + + +FSS L +++ V+ R
Sbjct: 81 APGQSEFIVGELANFL-AHREVMGWLLLATMLFFSSLAFTVLENAMSVVFLHRVVIRRRH 139
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ ++ ++ + Y+L + L++++ V ++ +F +L +
Sbjct: 140 FLVSAVLPYCYILCLGLGLLLVTLVSGSMQALGEKSVEFLGYSWSLSGFSGVLLYLLGLA 199
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L V++ +P + + L G + + W V Y T S +Y L +
Sbjct: 200 GEIFLLTSVYMVMPVGRLSLRHALIGGVTAALLWEVTRHALVWYFGTLSQVGLVYGSLTT 259
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
+ L+ L + +LGA++ +
Sbjct: 260 AIVVLLSLEIAATLLLLGAQVISEYER 286
>gi|56476355|ref|YP_157944.1| ribonuclease BN falily [Aromatoleum aromaticum EbN1]
gi|56312398|emb|CAI07043.1| conserved hypothetical protein,ribonuclease BN falily [Aromatoleum
aromaticum EbN1]
Length = 317
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/274 (11%), Positives = 90/274 (32%), Gaps = 6/274 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALL-SVFPFIVFGANLAGFLGAHQFV 59
MR+ F ++ + ++++ D + A+ ++ + I+ + + LG
Sbjct: 1 MRKVLGYWFGVLRRTVNYWLDSDAFIHAAALAFFTVFSVAPVVIIVVSIVGAVLGEDAAR 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
+ + A A+ + + L + A + ++ ++ SLN
Sbjct: 61 GQIAAQLEQAIGPEAAQAVQTAVASSRLEATGLLPTLVGIGAMLFGATTVFAQMQRSLNA 120
Query: 119 AYRVVEMRSWYITRL---ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ V+ S L +++ ++ + + + + L
Sbjct: 121 IWGVMAKPSRSSVFLLVKARLLSLMVVLAIGFVLLVSLLLSVIVNSLIAFASDWLPVPAP 180
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ ++ + + + LP + + G T + G L Y+
Sbjct: 181 LLAGVETVVSLAVVTLLFGTIFRVLPDVILRWKDVALGAFVTAALFTFGRSLIALYLAKT 240
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ ++ Y S++ L+++ + + GA
Sbjct: 241 AP-ASTYGAAGSLVLLLLWVNYSSLILLFGAAFT 273
>gi|313123266|ref|YP_004033525.1| ribonuclease bn-like family enzyme [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|312279829|gb|ADQ60548.1| Ribonuclease BN-like family enzyme [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
Length = 304
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/276 (18%), Positives = 111/276 (40%), Gaps = 9/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + + + + + I+ L S+FP ++ N + + D +
Sbjct: 12 VRRFLTTLSSVVSQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHL--ATGPIADYLE 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-- 125
+P +A+ I + +L + + A+ A + S V A+RI +NR Y V
Sbjct: 70 MIFPSDVARYIIPIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKEL 129
Query: 126 ----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R ++ + L +I++ V V L ++ +F + + + R
Sbjct: 130 KLGFWHFIWNRTLTVIFSALMVTMFIILALVVVFGQEVLHFLAPYFNLPLAWIDKLSSYR 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + IG+ +++ P K ++LPG I T W + LF+ Y+ F
Sbjct: 190 WLVLLVLMLIGVYYLNAVAPNVHFK-KALLPGTIVTVAGWEALSYLFSFYLKNFPVKWEN 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L +L + + G +N S+ +
Sbjct: 249 YGIVGTFIIFMLWLNLLAILLLFGTAVNVSLDQLRY 284
>gi|307544875|ref|YP_003897354.1| ribonuclease BN [Halomonas elongata DSM 2581]
gi|307216899|emb|CBV42169.1| ribonuclease BN, putative [Halomonas elongata DSM 2581]
Length = 309
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/265 (15%), Positives = 98/265 (36%), Gaps = 4/265 (1%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + F+ G +A + + LLS+ P L + + + V+ +
Sbjct: 25 WRVLTSFLRNRGILLAGGVGYNVLLSIVPLFALLVVLLAGVVDERQLMGVLSIQVRHLTP 84
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR---VVEMRSWY 129
A+ + D + +L + + FSS L +L + RS +
Sbjct: 85 AYAEVVLDAVRSLLDS-RDAIGILGIPVLLVFSSFAFRMLEDALAIIFHAPDTHTDRSVW 143
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ L+ + ++L+ L+ ++ + + A L + + + +
Sbjct: 144 VSVLMPYAFMLVLGAGLLSLTLMVSLVNAVNAVWMALLGRELPLSGLSGPMLNLTSFVGV 203
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ ++ +P + + L G + W +L Y S + +Y LA+++
Sbjct: 204 FLLFSAIYKVMPVVRIALHRALVGGFVAALLWEGARLLLIFYFTNLSFVNAVYGSLATLI 263
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
L+ L + + +LGA++ A +
Sbjct: 264 VILLILEVGAIILLLGAQVIAELER 288
>gi|169630761|ref|YP_001704410.1| hypothetical protein MAB_3682c [Mycobacterium abscessus ATCC 19977]
gi|169242728|emb|CAM63756.1| Conserved hypothetical protein [Mycobacterium abscessus]
Length = 342
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/281 (11%), Positives = 94/281 (33%), Gaps = 9/281 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFV 59
R F FD I E + + +G A+ I+ + ++FP ++ + GF+ + +
Sbjct: 15 RARFPW-FDHIMRMQERYGKVNGNFFAAGITYFTVFALFPLMMVAFAVMGFVLSRRPDTI 73
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + GA + + + ++ L AA+ + +R +L+
Sbjct: 74 AELRGRISGAISGEVGNQLIN-LMDTAIASRTSLGIAGLATAAWAGLGWMANVRAALSAM 132
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLLL 175
+ ++ +S L ++ + ++ A+ + + +
Sbjct: 133 WEQPNDSENFVKGKLSDLLALGSTFVALALTIAVTAVGDEKTILRILGWMGLHDVAIPSV 192
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ I + + ++ LP + S + + I + + + + Y+
Sbjct: 193 LLKVVTIAIATVLSWALFTWMIARLPRERLPFSSSVRAGLIAAIGFELFKQVASIYLS-V 251
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + ++ +VF Y+ + A+
Sbjct: 252 IMHGPAGSTFGPVLGIMVFAYITARLLLYATAWAATSDENR 292
>gi|325684541|gb|EGD26704.1| putative ribonuclease BN [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 304
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 110/274 (40%), Gaps = 9/274 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + + + I+ L S+FP ++ N + + D +
Sbjct: 14 RFLTTLSSVVSQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHL--ATGPIADYLEMI 71
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM---- 125
+P +A+ I + +L + + A+ A + S V A+RI +NR Y V
Sbjct: 72 FPSDVARYIIPIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKELKL 131
Query: 126 --RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ R ++ + L +I++ V V L ++ +F + + + R
Sbjct: 132 GFWHFIWNRTLTVIFSALMVTMFIILALVVVFGQEVLHFLAPYFNLPLAWIDKLSSYRWL 191
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++ + IG+ +++ P K ++LPG I T W + LF+ Y+ F Y
Sbjct: 192 VLLVLMLIGVYYLNAVAPNVHFK-KALLPGTIVTVAGWEALSYLFSFYLKNFPVKWENYG 250
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ + + +++L +L + + G +N S+ +
Sbjct: 251 IVGTFIIFMLWLNLLAILLLFGTAVNVSLDQLRY 284
>gi|78049549|ref|YP_365724.1| putative ribonuclease BN [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78037979|emb|CAJ25724.1| putative ribonuclease BN [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 347
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/286 (17%), Positives = 98/286 (34%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + F+E D A+ +S ALLS+ ++
Sbjct: 38 KHLSRLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEA 96
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ + A+ I P G S L ++ L+ +LN
Sbjct: 97 LVQQIGQLAGGSAAEVAQTIIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLI 156
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 157 FRTDKQRLDGLMAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 210
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI T
Sbjct: 211 ----AVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIAT 266
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA + A + +
Sbjct: 267 AAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 311
>gi|297561757|ref|YP_003680731.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
gi|296846205|gb|ADH68225.1| ribonuclease BN [Nocardiopsis dassonvillei subsp. dassonvillei DSM
43111]
Length = 336
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 102/272 (37%), Gaps = 14/272 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA---GFLGAHQFVPTVIDVVF 67
++ + F + +A+ + L+S+ ++ + FV + +
Sbjct: 28 LVLRTVRAFARDRVVGLAAESAFFTLISLPALMLGLLGALGPLTVVLGEDFVEEIRLWIL 87
Query: 68 GAW-----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
P+ + + + L G+ +++ L + + S + S+ +Y +
Sbjct: 88 DLTARVLTPDTVDSVVEPLVDDFLGGVPGGVLSVTFLVSLWSGSRAMNVFIRSITISYGL 147
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E+R W R+++F L + +++ V VA P + + + +
Sbjct: 148 DELRGWVRQRVLAFVAYLGGLLFAILLLPVLVAGPDLVNRLLPM------TVGRLNLFYW 201
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
L + ++ ++ + LPG + + + G+V Y+ T+Y
Sbjct: 202 PTVALLAVAAVTLLYALSVPVRTPLWRHLPGALLAALVLITGSVALRVYLDASFGQVTIY 261
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
LA+ + L +L+++ + ++G+ NA +
Sbjct: 262 GSLAAPIAILAWLFVMAIAVLVGSSFNAEIDA 293
>gi|113955387|ref|YP_731728.1| YihY family protein [Synechococcus sp. CC9311]
gi|113882738|gb|ABI47696.1| YihY family protein [Synechococcus sp. CC9311]
Length = 310
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/295 (13%), Positives = 104/295 (35%), Gaps = 19/295 (6%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPT 61
+ ++ A + + D +++ + L S+FP ++ ++A +
Sbjct: 6 RLRRLVRSLWRACLRWAKCDCVDLSAAFAYYTLQSIFPILLISLSIASWFLGRQDALESK 65
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+I G P + + ++Q++ + + + + R S
Sbjct: 66 IIAYASGVLPPSAVVIVQNTLMQLVRQGFGAGLLGAGVLLLTAGNVYLTLQRGSARLWEG 125
Query: 122 VVEMRS-----------WYITRLISFGYVLLASVTLVIMSF------VFVAIPLALAYVR 164
V+ + + RL +F V+L + +V+ + A L+
Sbjct: 126 VIVPQQRNLPFKLQAVQFIRIRLEAFFVVILIGLLVVLDQLSANVRMIPTAALTELSVAI 185
Query: 165 KFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
+ A + + ++ GR+ L + + + LP+ + ++PG + V
Sbjct: 186 PWLGAFLSHIPVLQFGRLMVPFLGFSVSALSLQFLLPSRRVPFKPLIPGSLLIGFLLTVL 245
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + I++ Y + S++ ++++M+GV G + + +R
Sbjct: 246 NLAVSRSILSLGARYQAYGVIGSVLVLTLWVWMVGVVIYFGQCWSVELAKASFRH 300
>gi|292492584|ref|YP_003528023.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
gi|291581179|gb|ADE15636.1| ribonuclease BN [Nitrosococcus halophilus Nc4]
Length = 294
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 92/273 (33%), Gaps = 2/273 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I F G +A I+ LLSV P + + +
Sbjct: 16 LRFLLQVIAGFRVNQGLLLAGAIAYYTLLSVVPMFALILVGLSQVVDPDQLLETTNDYLS 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A+ +T+EI L K + + L +FSS L +++ +
Sbjct: 76 LLAPGQAEALTEEIAGFLEN-WKIIGIVGFLVLLFFSSMAFTVLENAMSIIFFHRVAIHR 134
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA-TML 187
+ + + + + V + A + LGN+ + IY +L
Sbjct: 135 RHFLVSAILPYCYLFLLGLGLFVVSLVSSGLHALDERSVTLLGNIFGGYYAVGIYVLGLL 194
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ L ++L +P + L G + + W + + Y T S + +Y A+
Sbjct: 195 GEILLLTSLYLVMPLGRIVFSHALIGGVVATLLWEITRQVLVWYFSTLSFVNIIYGSFAT 254
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ L+ L + + GA++ A ++K
Sbjct: 255 AVMILLSLEAAAIIVLFGAQVIAEYERIDTQEK 287
>gi|284008991|emb|CBA75907.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 307
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 98/274 (35%), Gaps = 11/274 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ A E F + G + I+ + LS+ P ++F GF+ + +I
Sbjct: 31 FIAHLIRAAERFNDRMGNQFGAAITYFSFLSLIPVLMFSFAATGFILASNPDLLEKLIRG 90
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + + A Y N V LR ++ R +
Sbjct: 91 ISKSISDPTLAQTLERSIDTAIRQRTAVGLTGLAIALYSGVNWVNNLRQAILAQSRDIWE 150
Query: 126 RS------WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA--LGNLLLII 177
R+ + L F +++ + LVI + A A + + L I
Sbjct: 151 RNEDEKESIFFRYLRDFLFLIGLLIALVITITLTSIAGSAQATLVSLLHLDSIEWLRPIW 210
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ +++A ++ +++ LP + + +S++ G + I + + + T + ++
Sbjct: 211 TIVGLTISIMANYLLFLWIFWILPHQQFRRISLIKGTLIAAIGFEILKSIMTWVLPNLAS 270
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S A S++ + F Y + A A+
Sbjct: 271 -SPSGAAFGSVIGLMAFFYFFARLTLFCAAWIAT 303
>gi|313892387|ref|ZP_07825979.1| YihY family protein [Dialister microaerophilus UPII 345-E]
gi|313119246|gb|EFR42446.1| YihY family protein [Dialister microaerophilus UPII 345-E]
Length = 281
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 47/258 (18%), Positives = 105/258 (40%), Gaps = 4/258 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I ++ F+++D A A+ + +L + PF+VF N F A Q VI P
Sbjct: 14 IKHMVKRFIKDDVTAFAAESTYYFILGLVPFLVFFTNAILFFAAPQI--QVIIKFLHYLP 71
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-RSWYI 130
+ + + + I +++ + I A + SS G+ + ++++ + ++W
Sbjct: 72 QQLEVSMAENIYRIIQGRSTVWLAIGLFGALWTSSQGINVIIRAMDKIFFKNRNIQNWIT 131
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ S + LL + +L++ + V + + +F L I + + +
Sbjct: 132 VSIKSLLFTLLITFSLILSLGMIVFANALIYVIAYYFGIPEMFLEIWNIAKYAIPFIMMI 191
Query: 191 IGLIFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L + F PA K + IL +F ++ ++ +YI+ S Y L ++
Sbjct: 192 FSLAAFYRFAPAKKCATWPVILVTSLFVTGILLLLTGIYGYYILEISKMGATYGSLIGLV 251
Query: 250 TCLVFLYMLGVFFILGAE 267
++ + + + G+E
Sbjct: 252 VLFIWFRLASMVILTGSE 269
>gi|166710400|ref|ZP_02241607.1| ribonuclease BN [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 320
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 97/286 (33%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + F+E D A+ +S ALLS+ ++
Sbjct: 11 KHLSRLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEA 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ V A I P G S L ++ L+ +LN
Sbjct: 70 LVQQVAQLAGGSAADVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLI 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 130 FRTDKERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 183
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI T
Sbjct: 184 ----AVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGRYAIGVYIAT 239
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA + A + +
Sbjct: 240 AAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 284
>gi|56552587|ref|YP_163426.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ZM4]
gi|241762169|ref|ZP_04760252.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260753757|ref|YP_003226650.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis NCIMB 11163]
gi|56544161|gb|AAV90315.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ZM4]
gi|241373419|gb|EER63019.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258553120|gb|ACV76066.1| ribonuclease BN [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 340
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 57/313 (18%), Positives = 117/313 (37%), Gaps = 39/313 (12%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R+ + F II + +G+ A + + ALL++FPF++ +A +G
Sbjct: 19 RKRYAAFFRIIKQVASGVI-NNGFPHAGNFAYMALLTLFPFMILTIIVASTIGRGAAGFA 77
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ A P ++ ++ I QVL+ + L SAL + + S + ++R L R Y
Sbjct: 78 AVRSFLSALPPNVSSQLSGPIFQVLSTKSGSLIWWSALVSLWSVSGFIASIRELLYRTYH 137
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN--------- 172
+ + RL + + A + + I+ + V I + F +
Sbjct: 138 MEPPTEFIRYRLGAMAINIGAVLMMFIILSIQVLIATLQNVFSQRFGWVMEYAKAALPHI 197
Query: 173 -----------------------------LLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+L I + I +L + ++F + P
Sbjct: 198 SLSDNHSLIDQLNLIGLTSDRIHAFFEHITILSIISRVISGGLLFGALYVLFYSITPPQY 257
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ PG T W + +++ + Y+ Y GLA + L++ +++G+ +
Sbjct: 258 RKARYYKWPGAFLTAFWWQMVSMILPIALNNMLDYNRSYGGLAGSVIVLIYFWIIGLGLV 317
Query: 264 LGAELNASMIIYY 276
+G LNA++
Sbjct: 318 VGIHLNATLAFDR 330
>gi|58583750|ref|YP_202766.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58428344|gb|AAW77381.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 338
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 98/286 (34%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + F+E D A+ +S ALLS+ ++
Sbjct: 29 KHLSRLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEA 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ V A+ I P G S L ++ L+ +LN
Sbjct: 88 LVQQVAQLAGGSAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLI 147
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 148 FRTDKERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 201
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI T
Sbjct: 202 ----AVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGRYAIGVYIAT 257
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA + A + +
Sbjct: 258 AAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 302
>gi|294814594|ref|ZP_06773237.1| Putative membrane protein, ribonuclease BN-like family
[Streptomyces clavuligerus ATCC 27064]
gi|326442982|ref|ZP_08217716.1| ribonuclease BN family membrane protein [Streptomyces clavuligerus
ATCC 27064]
gi|294327193|gb|EFG08836.1| Putative membrane protein, ribonuclease BN-like family
[Streptomyces clavuligerus ATCC 27064]
Length = 328
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/265 (10%), Positives = 87/265 (32%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + +A+ I+ + L++FP + A +A L + +
Sbjct: 17 HAWRSYLTLERAHWARLAAAITFLSFLALFPLLTVAAAVAAALIGADRAGRLEARISEQV 76
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV--EMRSW 128
P + + ++ A + ++ + ++R L + + + ++
Sbjct: 77 PGISDQLDFGSLV----ANAGTVGLVAGAFLLVTGIGWIGSMRDCLRAVWGLDDEDRGNF 132
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + G +L T ++ A+ + + + +
Sbjct: 133 LLRKAKDTGVLLGLGATALVSLAASALGTSAVGWGAERLGVERGGAGGVLLAVAAIAIAV 192
Query: 189 L--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F+ L+++ LP + +L + I + + +L + Y+ + S +Y
Sbjct: 193 VADFLMLLYLLTLLPGVRPGRRPLLVAALLGAIGFELLKLLLSGYMQQVAAKS-LYGAFG 251
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 252 VPVALLLWINFTAKLLLYCAAWTAT 276
>gi|329889838|ref|ZP_08268181.1| ribonuclease BN-like family protein [Brevundimonas diminuta ATCC
11568]
gi|328845139|gb|EGF94703.1| ribonuclease BN-like family protein [Brevundimonas diminuta ATCC
11568]
Length = 309
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 90/272 (33%), Gaps = 6/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ ++ A D +S ALL++FP I + V
Sbjct: 12 RLWLRLMTRAFSRSWGRDVMLYTGGVSFFALLALFPAIAILIGFYKAVLTIGQVSEQAAA 71
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRV 122
+ P +EI ++ A+ + SA+A Y + G +AL LN +
Sbjct: 72 LADVIPSAARTLFLNEIDRLANASARTVSAQSAIALVIGAYAAHRGFKALLAGLNLIHDE 131
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++ +++F L A V I+S V L L + +G
Sbjct: 132 TNPLGFFKFNMLAFLVALAAFVLFTIVSGAVVTSRLMEHAYADQ---PVGWLALPLDGLW 188
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A L L + +++ + A + + + G + + + L T Y+ Y
Sbjct: 189 PALGLWLGLTMLYRYAMAHAKRVAWKAAIIGGLVATVMSTFFSWLCTIYVEQIVHLGATY 248
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ +++ L++L G + I
Sbjct: 249 GSVGAVVVLLIWLSWNVNAVFYGGAFATELEI 280
>gi|284989615|ref|YP_003408169.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284062860|gb|ADB73798.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 355
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/274 (15%), Positives = 105/274 (38%), Gaps = 9/274 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVV 66
++ + + +D + ++ + LS+ P ++ + G++G + V +
Sbjct: 29 RLVRRTMGNAWNDDIFTESAAAAFWQTLSLPPLLLGLFGILGYVGGAFGPDTIAAVQQWI 88
Query: 67 FGAWPEVIA-----KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V + + I + VL+ + ++ + + + S+ + + ++ RA+
Sbjct: 89 IDLTGGVFSRNALDEIIAPTVADVLSTARAEVISVGFVLSFWSGSSAMASFVDAITRAHD 148
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E+R+ R +S L+ VT +++ + P + + + +
Sbjct: 149 QYEVRNLIWQRTLSMLMYLVGLVTGILVLPLLALGPERVLPLLPD-SWQHSAGTAVDTVY 207
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L L + L ++ K LPG + + ++ G+ Y+ +
Sbjct: 208 YPVLGLVLLLALTTLYRVALPLKPPWYRGLPGALLAALVFLAGSSGLRLYLDWLTGSGYT 267
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA+ + L+ + + ILGA+LNA++
Sbjct: 268 YGALAAPIAFLLATFFIAFAIILGAQLNAAIQAL 301
>gi|255321533|ref|ZP_05362691.1| ribonuclease BN [Campylobacter showae RM3277]
gi|255301389|gb|EET80648.1| ribonuclease BN [Campylobacter showae RM3277]
Length = 276
Score = 93.2 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/267 (14%), Positives = 93/267 (34%), Gaps = 12/267 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVF 67
I A+ ++ AS +S +LS+ P ++ +L + + + + + +F
Sbjct: 13 LKIWLTAMLKIKDKQLLHYASSLSFHTMLSIIPVLLISLSLFTQMPSFSVYYAKIKEFIF 72
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
I++ I L + L + A + S +NR + R
Sbjct: 73 AQLLPSNQDAISNYIETFLQNSS-SLGILGLGAIIFTSIMFFADYEYVINRIMHT-QSRK 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ + + + LA + L + ++ L + N L
Sbjct: 131 FWNSLSAYWTLITLAPLGLGLSFYLSNLFQDMLN---------SSAYTKWINFLSIFPYL 181
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ +L + + + L + W +G +F Y TY ++Y +
Sbjct: 182 IIWAIFCVTYLISINRQITLKNALFSSFVASLIWYLGKNIFVFYAANNKTYLSIYGSFSV 241
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
++ V++Y+ + F+ G +L A +
Sbjct: 242 VLLFFVWIYVSWIIFLYGVKLCAYLEK 268
>gi|322368510|ref|ZP_08043078.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
gi|320551794|gb|EFW93440.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
Length = 347
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/253 (17%), Positives = 94/253 (37%), Gaps = 15/253 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
EE+ MA I+ + +S+ P ++ + +G+ +I + P + +
Sbjct: 3 EENIKFMAGSIAYHSFVSLLPVLLLLTLIVSAVGSETLARRLIQDIGSYLPASANIFLQN 62
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
I + + + L + + AL + Y V S+
Sbjct: 63 AISGAPSPGDSLVVVLVLL---WGTFRIFRALDAAFADIYDVERKTSFRDELEDG----- 114
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + +++ V + + A + P L ++L L I + ++
Sbjct: 115 VVVLVALVLVVVTIGVTSATISTPQRLPFDEYLAE-------GVSILVLGIAFLPMYYVF 167
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P +I ILPGV + W V +F Y + +++Y + I+ +V+LY+ +
Sbjct: 168 PNIDVEIGEILPGVAIAAVGWQVLHSVFHMYAQVSAYNTSLYGTVGKILLVIVWLYVGSI 227
Query: 261 FFILGAELNASMI 273
+ GA +NA +
Sbjct: 228 VILFGAAVNAVLA 240
>gi|292656690|ref|YP_003536587.1| ribonuclease BN-like protein [Haloferax volcanii DS2]
gi|291372769|gb|ADE04996.1| ribonuclease BN-like protein [Haloferax volcanii DS2]
Length = 352
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 90/277 (32%), Gaps = 16/277 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M + + E MA I+ A +S+ P + G
Sbjct: 1 MNPRMTRALTLGRAIVYEVRTERLTFMAGSIAYGAFVSLLPLFLLVLAAVSATGDSGLRE 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI V+ I E+ + L + AL + + L + + Y
Sbjct: 61 GVIAVIQSVLTPGAGDVIVAELES--STQLASLSVVGALVLVWGTLRIFRGLDTAFSDIY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ L ++ S+ +V + + A+P + W
Sbjct: 119 ESEAANTFADQLLDGIVVLVTVSLAVVAGALIESALPALDGALG-------------WVV 165
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ LF+ ++ P + ++PG + + LF Y+ FS+ +
Sbjct: 166 YRGLLVAVLFVTFYPMYYIFPDENVTSLEVVPGTLVAAVGLTTFESLFRLYVE-FSSRTP 224
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +A I+ L +LY G+ +LGA +NA +
Sbjct: 225 ESSVVAGILVLLTWLYFSGLVILLGAAVNAVLSNRSR 261
>gi|160880810|ref|YP_001559778.1| ribonuclease BN [Clostridium phytofermentans ISDg]
gi|160429476|gb|ABX43039.1| ribonuclease BN [Clostridium phytofermentans ISDg]
Length = 266
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/274 (17%), Positives = 104/274 (37%), Gaps = 17/274 (6%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + I I+ F E D A+ + + + ++
Sbjct: 4 KILNHILAFIQRFNEHDITGSAAKATYYL----------LLSFFPLCLLLLPLFDDTRIL 53
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P +A + D + LA + + +S + AL + AY +
Sbjct: 54 TIFLPSSVAVLLEDIVKPELAFQTTS-----IVIILWSASASIWALMTGIYTAYTGEKKL 108
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
R+ + + + L++ V + + ++ + F L ++ R+ +
Sbjct: 109 KLIQGRIRAILLIFILVAALLLCVSVTIFSKSLIYWIIEDFVHLSY--GLMNGLRLVILI 166
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L ++ +I ++ F P K ++ SI G I T I WV+ F Y+ F+ YS +Y +
Sbjct: 167 LIIYFIVICLYQFTPNLKVRVRSISIGAIITAIGWVITTWGFEVYMKLFNNYSALYGSIG 226
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ + ++LY++ + + GAE+N + K+
Sbjct: 227 AFLGLTLWLYIVSIVLLCGAEINVMLSERRNEKE 260
>gi|167646668|ref|YP_001684331.1| ribonuclease BN [Caulobacter sp. K31]
gi|167349098|gb|ABZ71833.1| ribonuclease BN [Caulobacter sp. K31]
Length = 330
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/280 (15%), Positives = 94/280 (33%), Gaps = 6/280 (2%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ + ++ A++ D +S LL+VFP + L L +
Sbjct: 33 HWVREILRVMGLALQRLWGRDVMLYVGGVSFFILLAVFPGLAILIGLFSLLLTPEQAAFQ 92
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA---AYFSSNGVEALRISLNRA 119
D + P E+ ++ P + + SA+ Y + G +AL L+
Sbjct: 93 ADKLSLLMPSGARPIFQSELARLSHAPERAISAQSAVVLVIGLYAAHRGFKALLAGLSFI 152
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + R + ++ ++ A L +MS VF+ L + + A + + W
Sbjct: 153 HDEEDQRGFLGFNFMALVVLVAAFALLFVMSGVFLTFRLLSSTLGLRPLAGVSWIQSEWT 212
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ + + + P + + G + V + Y+ +
Sbjct: 213 WASAGLLVGMTLIYRYAMSRAP---VGWRASMSGGAAAAVMCVFMSWASAFYVEQVAHLG 269
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y +++++ L++L G L M I +
Sbjct: 270 ATYGSISAVIIFLIWLSWSVNAVFYGGALATEMEIALDER 309
>gi|188574977|ref|YP_001911906.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188519429|gb|ACD57374.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 320
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 98/286 (34%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + F+E D A+ +S ALLS+ ++
Sbjct: 11 KHLSRLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEA 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ V A+ I P G S L ++ L+ +LN
Sbjct: 70 LVQQVAQLAGGSAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLI 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 130 FRTDKERLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 183
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI T
Sbjct: 184 ----AVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGRYAIGVYIAT 239
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA + A + +
Sbjct: 240 AAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 284
>gi|167724455|ref|ZP_02407691.1| putative ribonuclease [Burkholderia pseudomallei DM98]
Length = 270
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/250 (18%), Positives = 90/250 (36%), Gaps = 5/250 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYMLG 259
L++LY
Sbjct: 261 VLLMWLYFSA 270
>gi|186472434|ref|YP_001859776.1| ribonuclease BN [Burkholderia phymatum STM815]
gi|184194766|gb|ACC72730.1| ribonuclease BN [Burkholderia phymatum STM815]
Length = 311
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/269 (15%), Positives = 97/269 (36%), Gaps = 4/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ F + G +A I+ ALLS+ P ++ A + + + +
Sbjct: 25 RFALQVIKAFRKNQGLLLAGAIAYYALLSIVPLLILVAIAFSHFVGEKLLLDTLTRLLEW 84
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMR 126
++ I +E+ L + + +FSS L +L+ + R
Sbjct: 85 LVPGQSRAIVNELANFL-AHRSVIGWFLVVTMIFFSSLAFTVLENALSIIFVHRVAIRRR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ ++ ++ + + L + +++++ V ++ + F + L +
Sbjct: 144 HFLLSAILPYLFSLSLGIGVLLVTLVSSSLQAVASDSVVLFGHVIPLTGATRVVLYLFGL 203
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L ++L +P ++ + L G + + W + + Y T S S +Y L
Sbjct: 204 AGEIFVLTAIYLVIPVGRTTLRHALFGAVAAAVLWEITRRVLVWYFATLSQVSVVYGSLT 263
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + L L L + GA+L A
Sbjct: 264 TAIVVLFSLEALATLMLFGAQLIAEYERL 292
>gi|46205254|ref|ZP_00048800.2| COG1295: Predicted membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 204
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+DI + F ++ ++A+ ++ LLS+FP I G + + + +
Sbjct: 74 WWDIAMRVYQEFNKDRVLSVAAGVTFYTLLSLFPAIAALVTCYGLVADVNTINVHLASLH 133
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLF---TISALAAAYFSSNGVEALRISLNRAYRVVE 124
G PE I +++ ++ + L S + + ++ ++A+ +LN Y E
Sbjct: 134 GVLPESAIDIIGEQVKRIATKGSGTLGLTFFTSLTLSLWSANAAMKAMFDALNVVYEEEE 193
Query: 125 MRSWYITRLIS 135
R+++ +
Sbjct: 194 KRNFFWLNVRR 204
>gi|271962809|ref|YP_003337005.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270505984|gb|ACZ84262.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 311
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 98/272 (36%), Gaps = 10/272 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVP 60
D + + + + G +A ++ A LS FP I + GF + +
Sbjct: 23 RVRWPWVDHLIRTVHRYQIQSGDRLAGAVTYFAFLSFFPIIALAFAVFGFFLSVRPDAIR 82
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T+ + P + + +I I + Y V+ALR +L
Sbjct: 83 TLQQAIDQYLPGLADQLPIQQIAD----SRASAGVIGLVGLLYAGLGAVDALRGALREIS 138
Query: 121 RVVEMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LII 177
E ++++ +L ++L +T++ V A V ++ +++ I
Sbjct: 139 MTTEPPLNFFLAKLRDLAALILVGITMIASVLVGGFATQASGTVSEWLGLSQSMIGSGSI 198
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
W + ++LA + + + ++ ++ +L G + +++ + L +
Sbjct: 199 WFAGLAVSILADTVLFVIILRWMGRSRQPFRVVLRGALLGALAFGLLKQLAALILSRTLN 258
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ +Y A ++ L+++ + + A
Sbjct: 259 -NPIYGVFAVMVGLLIWINLSARVILYAAAWT 289
>gi|188993400|ref|YP_001905410.1| Putative ribonuclease BN [Xanthomonas campestris pv. campestris
str. B100]
gi|167735160|emb|CAP53372.1| Putative ribonuclease BN [Xanthomonas campestris pv. campestris]
Length = 315
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 50/286 (17%), Positives = 96/286 (33%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + F+E D A+ +S ALLS+ ++
Sbjct: 11 KHLTRVQRSLPMALFNRFLEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEA 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ + A+ I P G S L ++ L+ +LN
Sbjct: 70 LVQQIAQLAGGSAAEVADTVIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLI 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 130 FRTDKQRLDGIMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 183
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI
Sbjct: 184 ----AVGYVTTLALYSLAFAFLYRYLPDRTVNWRQAFVGGVITSLLFALGRYAIGMYIAK 239
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA L A + +
Sbjct: 240 AAPGSA-YGSMGTLVILLVWMYYASVVFFIGALLTAVIDERVRSHR 284
>gi|300712573|ref|YP_003738386.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299126257|gb|ADJ16595.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 279
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/257 (20%), Positives = 91/257 (35%), Gaps = 19/257 (7%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F E++ +A I+ SA +S+ P ++F F+ Q VIDV + I
Sbjct: 17 FSEKNITFLAGSIAYSAFVSLVPLLMFVLLAVSFV-DPQLQQQVIDVATNNISPSVGGVI 75
Query: 79 TDEILQVLAVPAK---GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
I Q A I L + S + + + Y S+
Sbjct: 76 EVMIEQQSGAGAGSTITASIIGILTLVWGSLKVFRGIDTAFSEIYETTARESFTGQIKNG 135
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
++ ++ +V + A + + I ++ L I
Sbjct: 136 LLMLVTLTLGIVAVVVAT------------NIVAFFSFVPFIEFVVPLVLVVGLVIAFFP 183
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ P + +LPG +F I W + VLF Y S + +ASI+ + +L
Sbjct: 184 MYYLFPEIDVEPRDVLPGTLFGAIGWAILQVLFQVYASLGGGDSNL---IASILLLVTWL 240
Query: 256 YMLGVFFILGAELNASM 272
Y V +LGA +NA +
Sbjct: 241 YFSAVILLLGAVINAVL 257
>gi|238854937|ref|ZP_04645267.1| YihY family protein [Lactobacillus jensenii 269-3]
gi|260664223|ref|ZP_05865076.1| methionine aminopeptidase Map [Lactobacillus jensenii SJ-7A-US]
gi|282931649|ref|ZP_06337142.1| putative ribonuclease [Lactobacillus jensenii 208-1]
gi|313472424|ref|ZP_07812916.1| putative YihY family protein [Lactobacillus jensenii 1153]
gi|238832727|gb|EEQ25034.1| YihY family protein [Lactobacillus jensenii 269-3]
gi|239529703|gb|EEQ68704.1| putative YihY family protein [Lactobacillus jensenii 1153]
gi|260562109|gb|EEX28078.1| methionine aminopeptidase Map [Lactobacillus jensenii SJ-7A-US]
gi|281304260|gb|EFA96369.1| putative ribonuclease [Lactobacillus jensenii 208-1]
Length = 286
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 51/274 (18%), Positives = 101/274 (36%), Gaps = 8/274 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + + I+ L S+FP I+ N+ V V + +
Sbjct: 7 WRHFFKLLSKRMSRGEINQGSIVIAYYLLFSMFPIIIIAGNIMPLFHLKSGV--VEEYLI 64
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P +A I + VL + G + L A + S+ A+RIS+NR Y V +
Sbjct: 65 YGLPAKVADFIMPIVKAVLQKQSTGYISFGVLIALWSFSSLTNAMRISMNRIYGVRQQEL 124
Query: 128 WYITRLISF------GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ V L++++ L V+ F + I+ +
Sbjct: 125 RFSFGRKLLERGVVVLITGSMIVLLMLLTIALTFGQEILNSVKAFLGISYLGIESIFTYK 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + + + + + LP + + +I PGV I W + LF Y+ F
Sbjct: 185 WLVLIVVMLVVIAYFNFALPNVQKRKRAIWPGVFVNLIGWAGLSYLFGLYLSHFKLSFEN 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y + + + +++L + + F+LG +NA+
Sbjct: 245 YGIVGTFIIFMLWLNLSSLLFLLGVCVNATFDEL 278
>gi|257388488|ref|YP_003178261.1| ribonuclease BN [Halomicrobium mukohataei DSM 12286]
gi|257170795|gb|ACV48554.1| ribonuclease BN [Halomicrobium mukohataei DSM 12286]
Length = 263
Score = 92.8 bits (229), Expect = 5e-17, Method: Composition-based stats.
Identities = 35/250 (14%), Positives = 80/250 (32%), Gaps = 14/250 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I+ + + + +A+ I+ A +S+ P ++ +A LG F V+ V+
Sbjct: 2 SIVRSVVTLARDRNVTFLAAGIAYYAFVSIVPLLLLAIAVASTLGGQAFADRVVAVLGRM 61
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+T + + L + L + + Y S
Sbjct: 62 LSASGQDLVTGALTD--TAGRGTASLVGFLVLLWSGLKLFRGLDQAFDEVYAAEVHTSLL 119
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
V+ ++ + V + + ++ A ++ +
Sbjct: 120 QQVRNGLVVVVGIALAVGTAVLVGI-----------ALSIQPWEIPLVNVFGTVALVVVI 168
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ + ++ LP + ILPG + WV+ + F Y + Y Y L +++
Sbjct: 169 TLAFLPIYYVLPPVDVSLREILPGAVIAAGGWVLLQLGFRIYAASAGQY-AAYGILGAVL 227
Query: 250 TCLVFLYMLG 259
+ +LY
Sbjct: 228 LFVTWLYFAS 237
>gi|326334108|ref|ZP_08200335.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
gi|325948084|gb|EGD40197.1| ribonuclease BN [Nocardioidaceae bacterium Broad-1]
Length = 307
Score = 92.8 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/270 (11%), Positives = 86/270 (31%), Gaps = 6/270 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH--QF 58
+R+ F + ++ EH+ E A I+ LS FP + G +
Sbjct: 14 LRDRFPALDRVV-RTQEHYGEVGASQQAGAITYFGFLSTFPILALAFFAVGQIAKVYGGA 72
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+++ + P ++ + + A + + A Y ++ LR +L
Sbjct: 73 ESDLVEAIDQVLPGLVGDGAGQLKIADIERAAGAVGIVGAFGLLYAGLGFIDGLRKALEA 132
Query: 119 AYRVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ V E + + ++ ++L + +++ I V + +
Sbjct: 133 VFLVPEEEQPGFLMAKVRDLAALILLGLIMLVAVAFTGLIRTFSVNVLDWIGLDEGFGWL 192
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I + + A + + P + G + I + V + ++ +
Sbjct: 193 IVLLTLVLGLAANTVLFFAMFHLAPQKDIPKRPLWAGAVLGAIGFEVLKQA-STLLLKAT 251
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ + +V+++ + + A
Sbjct: 252 QGQPAFQAFGIALILVVWIHYTSMVILYAA 281
>gi|299140346|ref|ZP_07033509.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
gi|298597680|gb|EFI53855.1| ribonuclease BN [Acidobacterium sp. MP5ACTX8]
Length = 319
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 96/271 (35%), Gaps = 2/271 (0%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + + + + A ++ +LS+FPFIV L+ + + V+ +
Sbjct: 43 WGQVKALGLYMTKTEVHTYAFSVAAQVILSLFPFIVLMLTLSQKVFHSAKMFDVVGEMMT 102
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + K S + ++ L ++LN + V + RS+
Sbjct: 103 HFLPNNQDFVMRNMRVLAYAHTKTKLV-SVVMLFITATGVFLPLEVALNSVWGVRKNRSY 161
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+++S G + + + + ++++ I +A
Sbjct: 162 LQNQVVSIGLAVGVAALAMSSVALSAGQRTVMSWIFFGHTDGMVFNFIAHIFMKLCATIA 221
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
++ LP K ++LP I + W L+ + + ++Y
Sbjct: 222 SIGLFFLIYWVLPNRKIPARAVLPTAIIVGLLWEGAKYLYVLALPHL-DFRSVYGPFEVS 280
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++ ++ G+ + GA ++A+ +
Sbjct: 281 VSLIMWAFISGLLLLAGAYVSATRQALRETR 311
>gi|322369825|ref|ZP_08044387.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
gi|320550161|gb|EFW91813.1| ribonuclease BN [Haladaptatus paucihalophilus DX253]
Length = 262
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/264 (17%), Positives = 96/264 (36%), Gaps = 13/264 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I ++ E + +A+ + A +S+FP ++ + F+G +F +ID
Sbjct: 7 IRSVVDIVRERNVTFLAASFAYYAFVSLFPLVLLALAVGTFVGGQEFSNMLIDAASRFLS 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ A + + G +S + + S L I+ Y+
Sbjct: 67 DEGATVLDRTLQN--TSGTAGASVVSIVILLWSSLKLFRGLVIAFEEVYQTFPDVGIVEQ 124
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + + +M V + +L F A+ + L++ ++
Sbjct: 125 VKKGLATLVAVVLGVALMVVVGTVLGSSLVTSIPFVGAIASSGLLLGLVFVFLP------ 178
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ LP K + LPG +F + W+V F +++ Y L I+
Sbjct: 179 ----LYYVLPPVKMSLREALPGTLFAALGWLVLQAGFQYFLGGSGKYGLT-GILGVIIVF 233
Query: 252 LVFLYMLGVFFILGAELNASMIIY 275
L +LY GV ++GA +N +
Sbjct: 234 LTWLYFAGVILLVGAVVNLVVADR 257
>gi|307824393|ref|ZP_07654618.1| ribonuclease BN [Methylobacter tundripaludum SV96]
gi|307734377|gb|EFO05229.1| ribonuclease BN [Methylobacter tundripaludum SV96]
Length = 314
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/278 (13%), Positives = 100/278 (35%), Gaps = 6/278 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
+ ++ ++ ++ + + ++ L S+ P +V +AG F GA + +
Sbjct: 29 YVLLSPSLTAWLAHRAASKGAAVAFYTLFSMTPILVLTIAVAGYFFGAEAAQGEITVQMQ 88
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A+ I + + + I+ L +++ L+ SL+ + + +
Sbjct: 89 ALVGPNGAQAINAVLAAARNSESGIVASAIATLLLLLGATSVFVELKDSLDEMWGTDKPQ 148
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF---PALGNLLLIIWNGRIY 183
+ ++ L+ + V ++ + + A V + + L++
Sbjct: 149 ASSLSVLLKTRVLCFGLVLVLAFLLLVSLVISAALAVLQQYVFGGLWSLAALVLSPLVSL 208
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ + ++ LP A G +FT + + +G Y+ S ++ +
Sbjct: 209 ISFGVIASLFAVIYKMLPEAPLAWQDAWFGALFTALLFSLGKYGIGVYLGN-SGVTSSFG 267
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S++ L+++Y F GAE + + +P
Sbjct: 268 AAGSVIALLLWVYYSAQIFFFGAEFTRQFALRFGSLRP 305
>gi|328464131|gb|EGF35603.1| ribonuclease BN-like family protein [Lactobacillus rhamnosus MTCC
5462]
Length = 215
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 50/189 (26%), Positives = 88/189 (46%)
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
GL I A+A + +S GV L++ N+ Y V +++ I RL+S + + +
Sbjct: 1 GGLLGIGAIATLWAASLGVTGLKMGFNQVYGVEATQNFIIQRLLSMLMTFTLIIVMGAIL 60
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
F L ++ + L R T+ ALFI ++F+ FLP K K+ ++
Sbjct: 61 IAFAFGRQFLEWLIPLLRLDTSWLRTFNTLRWPITVTALFIIIMFLDYFLPNVKIKMWTV 120
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
LPG FT I W++ A F+ Y+ F T Y + + + +++L + + GA +NA
Sbjct: 121 LPGTAFTVIGWLLIAQAFSLYMHYFGTRYLSYGTIGTFIAIMLWLNFSALVLLWGAVINA 180
Query: 271 SMIIYYWRK 279
Y+ +
Sbjct: 181 LTAEYFIGR 189
>gi|332638354|ref|ZP_08417217.1| integral membrane protein [Weissella cibaria KACC 11862]
Length = 313
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/261 (17%), Positives = 104/261 (39%), Gaps = 7/261 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ LLS+ P ++ +AG +G + + ++ P+ I +
Sbjct: 24 LSRANLNMVGPTITYYTLLSLVPVLMSVGAIAGLVGINA--QELNSMLREQLPKNIMSIL 81
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
I VL+ G+ + S + + +S+ + +R + N + V E S +TR+ SF +
Sbjct: 82 GPIITSVLS-GGVGILSFSIVITIWGASSVLAVIRKAFNAVHDVPERVSGMLTRVFSFLW 140
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+++ +T ++ +P +A + P L + + L++ + +
Sbjct: 141 LMVILLTAGVLMGASAMMPAIIAAL----PFDMPWLDKLAKQSWLFALFGLWVLMCVFNF 196
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
LPA + +++ G + + F+ Y Y L S++ +V+L ++
Sbjct: 197 ALPAKRLPWKALVAGSGIEVLLLLALNAGFSFYAQFAVKSVGFYQSLGSLLVLMVYLNLV 256
Query: 259 GVFFILGAELNASMIIYYWRK 279
G ++ L A +
Sbjct: 257 GTIMVVAQILIAWFADLFAAH 277
>gi|289666290|ref|ZP_06487871.1| ribonuclease BN [Xanthomonas campestris pv. vasculorum NCPPB702]
gi|289670010|ref|ZP_06491085.1| ribonuclease BN [Xanthomonas campestris pv. musacearum NCPPB4381]
Length = 320
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 98/286 (34%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + F+E D A+ +S ALLS+ ++
Sbjct: 11 KHLSRLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEA 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ V A+ I P G S L ++ L+ +LN
Sbjct: 70 LVQQVAQLAGGSAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLI 129
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 130 FRTDKQRLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 183
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI T
Sbjct: 184 ----AVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFALGRYAIGVYIAT 239
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA + A + +
Sbjct: 240 AAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 284
>gi|297571823|ref|YP_003697597.1| ribonuclease BN [Arcanobacterium haemolyticum DSM 20595]
gi|296932170|gb|ADH92978.1| ribonuclease BN [Arcanobacterium haemolyticum DSM 20595]
Length = 414
Score = 92.4 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 41/274 (14%), Positives = 107/274 (39%), Gaps = 11/274 (4%)
Query: 1 MREYFCIVFDI-IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQ 57
+ ++++ A + G+ +A I+ SAL ++ + + G +
Sbjct: 5 INAIITWIYELRFMRAYGRYGWARGYLLAGGIAYSALFAIAGALTIAFTAFSYTLGGNKE 64
Query: 58 FVPTVIDVVFGAWPE-----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
T+ + V + P + + D ++ P IS L + +++ + AL
Sbjct: 65 LQQTLFETVNSSLPGILKLDGSSSGLLDPNDLIIENPINMASIISLLVLLWSAASLMTAL 124
Query: 113 RISLNRAYRV-VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
RI++ Y + R + +L+ L+ + ++ + V + G
Sbjct: 125 RIAILGMYGITYLPRPFVKAKLLDLSGALMIGIGALVTVSLVTVSTQFSEIVLDWMGIPG 184
Query: 172 NLL-LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ +I+ G + +L +F+ + A + ++ G + ++ + +L T
Sbjct: 185 VVGNYLIYIGTLLIALLVDTGIFMFLFSVMCGAHPPLKDLVRGSLLAGVASSILRILGTT 244
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ + S + + A A+I+T L+++ +L ++
Sbjct: 245 VVSSVSE-NALLAPFAAIITLLIWVNLLAQVTLV 277
>gi|295699538|ref|YP_003607431.1| ribonuclease BN [Burkholderia sp. CCGE1002]
gi|295438751|gb|ADG17920.1| ribonuclease BN [Burkholderia sp. CCGE1002]
Length = 300
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 4/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ ++ F G +A ++ ALLS+ P ++ + + Q V + +
Sbjct: 18 RFLLQTLKAFRANQGLLLAGAVAYYALLSIVPLLILIVIVLSRVVPQQLVLDALSHLLRW 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN---RAYRVVEMR 126
+ + E+ L + + L +FSS L +++ VV+ R
Sbjct: 78 LVPGQSAALVRELSNFL-QHRAVIGWVLLLTMLFFSSLAFTVLENAMSLIFVHRVVVKRR 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I+ L+ + Y++ V L+I++FV A+ A + F +L +
Sbjct: 137 HFLISALLPYCYIMFLGVGLLIVTFVSSALDTIGAEGLQLFGLHVSLRGFTRVMLYLLGL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L V+L +P + + L G + + W V + Y T S S +Y L
Sbjct: 197 AGEIFVLTSVYLVMPVGRPSLKHALIGGVVAGVLWEVTRHVLVWYFATLSQVSLVYGSLT 256
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L+ L + GA++ + +
Sbjct: 257 MAIVILLSFEWLATLLLFGAQVISQYERF 285
>gi|209520668|ref|ZP_03269420.1| ribonuclease BN [Burkholderia sp. H160]
gi|209498906|gb|EDZ99009.1| ribonuclease BN [Burkholderia sp. H160]
Length = 300
Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 50/269 (18%), Positives = 101/269 (37%), Gaps = 4/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ ++ F G +A ++ ALLS+ P ++ + + Q V + +
Sbjct: 18 RFLLQTLKAFRANQGLLLAGAVAYYALLSIVPLLILIVIVLSRVVPQQLVLDALAHLLRW 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN---RAYRVVEMR 126
+ + E+ L + + L +FSS L +++ VV+ R
Sbjct: 78 LVPGQSAALVRELSNFL-QHRTAISWVLLLTMIFFSSLAFTVLENAMSLIFVHRVVVKRR 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I+ L+ + Y+L V L+I++ V A+ A + F +L +
Sbjct: 137 HFLISALLPYCYILFLGVGLLIVTIVSSALEAIGAEGLQLFGLHVSLQGFTRVVLYLFGL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ L V+L +P + I L G + + W + + Y T S S +Y L
Sbjct: 197 VGEIFVLTSVYLVMPVGRPSIRHALIGGVVAGVLWEITRHVLVWYFATLSHVSVVYGSLT 256
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L+ L + GA++ + +
Sbjct: 257 MAVVILLSFEWLATLLLFGAQVISQYERF 285
>gi|167899031|ref|ZP_02486432.1| putative ribonuclease [Burkholderia pseudomallei 7894]
Length = 269
Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 90/249 (36%), Gaps = 5/249 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPE 72
DA + F + AMA+ I+ + S+ P +V +AG F GA V V
Sbjct: 22 DAFKRFSADRCTAMAASIAFYSAFSLAPTLVMVIAVAGWFFGADAARGEVFSHVHELIGN 81
Query: 73 VIAKPITDEILQVLAVPA--KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + + + IS A +S +L +L+ + R+ +
Sbjct: 82 EAAAGVQTIVENAHRSGSRGGTAALISFAMLALGASATFASLNTALSVIWPATGARASSV 141
Query: 131 TRLISFGYV-LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
L+ + + + + V + + A+ ++ ++ ++I + + L
Sbjct: 142 LGLVRIRLISFGLVLGVAFLLIVSLVLDTAITFIGRWLWGASPYVVIGNLLQFSIGIAVL 201
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ FLP A+ + G I + + + G LF Y+ T S + S
Sbjct: 202 AFAFGTLMKFLPDARVSNRDAMTGGIVSAVLFSAGKKLFALYLAHAGTASA-FGAAGSFA 260
Query: 250 TCLVFLYML 258
L++LY
Sbjct: 261 VLLMWLYFS 269
>gi|104773673|ref|YP_618653.1| hypothetical protein Ldb0557 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513669|ref|YP_812575.1| ribonuclease BN-like family protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|103422754|emb|CAI97387.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
gi|116092984|gb|ABJ58137.1| Ribonuclease BN-like family enzyme [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 304
Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/276 (17%), Positives = 110/276 (39%), Gaps = 9/276 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V + + + + + I+ L S+FP ++ N + + D +
Sbjct: 12 VRRFLTTLSSVVSQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHLD--TGPIADYLE 69
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-- 125
+P +A+ I + +L + + A+ A + S V A+RI +NR Y V
Sbjct: 70 MIFPSDVARYIIPIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKEL 129
Query: 126 ----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R ++ + L ++++ + V L ++ +F + + + R
Sbjct: 130 KLGFWHFIWNRTLTVIFSALMVTMFILLALIVVFGQEVLHFLAPYFNLPLAWIDKLSSYR 189
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ + IG+ +++ P K ++ PG I T W + LF+ Y+ F
Sbjct: 190 WLVLLVLILIGVYYLNAVAPNVHFK-KALFPGTIVTVAGWEALSYLFSFYLKNFPVKWEN 248
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y + + + +++L +L + + G +N S+ +
Sbjct: 249 YGIVGNFIIFMLWLNLLAILLLFGTAVNVSLDQLRY 284
>gi|282860934|ref|ZP_06270000.1| ribonuclease BN [Streptomyces sp. ACTE]
gi|282564670|gb|EFB70206.1| ribonuclease BN [Streptomyces sp. ACTE]
Length = 306
Score = 92.0 bits (227), Expect = 8e-17, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 94/265 (35%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E V +A+ I+ + L++FP I GA + L + + + +
Sbjct: 21 HAWRSYETLVRVHWARLAAAITFLSFLALFPLIAVGAAVGAALLTDKQLNKIEKQLAEQV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR--VVEMRSW 128
P + + D ++ A + ++ L + + ++R L + + +
Sbjct: 81 PGISDQLGIDNLV----AHAGTVGLVAGLLLLFTGVGWIGSMRECLRAVWEKDDADQGNP 136
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATM 186
+ +L G ++ + V A+ + + ++ + +
Sbjct: 137 VVRKLKDAGLLIGLGGAALATVAVSTIGSTAIGWTADQLGIPEDGAGGVLLRVAALVVAV 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
A F+ L+++ LP + + + + + + +L Y+ ++ S MY
Sbjct: 197 GADFLLLLYLLTLLPGVEPPRHRLFVAGLVGAVGFELLKLLLGSYMKGVASKS-MYGAFG 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ ++ A A+
Sbjct: 256 VPIALLLWINFSAKLLLVCAAWTAT 280
>gi|152967016|ref|YP_001362800.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151361533|gb|ABS04536.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 361
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 47/282 (16%), Positives = 98/282 (34%), Gaps = 16/282 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+ V ++ + V +A+ ALLS+ P + G+LG V
Sbjct: 60 RVWRDVRALVAGTVGACVRFRVTGLAAEGGFFALLSLPPLVFGVVASLGYLGRWLGAEDV 119
Query: 63 IDVVFGAWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
A I V L ++ L + + S +
Sbjct: 120 AAARGQLARITEAVFTSRAISDVILPTFDSVTTAGRADLTLLAFLVSVWSGSRALNVHVD 179
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++ Y + R TRL+S L+A + V++ + + P L L L
Sbjct: 180 TIAIMYGLGGHRGIVRTRLLSLSTYLVALLVGVVVVPLVLVGPRLLQE------WLPEHL 233
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ ++ + ++ +S+ +PG + + W V + + +
Sbjct: 234 RVLSQLYWPVVLVLSVSCVTTLYHLATPVRSRWWRDVPGALLALLGWFVVSAVLRWSLSL 293
Query: 235 F--STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+++Y LA+ + LV+ Y L + ++GA LN+++
Sbjct: 294 SVAGPSTSIYGPLAAPIVVLVWFYFLAIAVLIGAALNSAVDR 335
>gi|121604512|ref|YP_981841.1| putative ribonuclease BN [Polaromonas naphthalenivorans CJ2]
gi|120593481|gb|ABM36920.1| putative ribonuclease BN [Polaromonas naphthalenivorans CJ2]
Length = 311
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 94/267 (35%), Gaps = 4/267 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ F G +A ++ ALLS+ P ++ A + + + G
Sbjct: 31 FALQIIKGFRANQGLLLAGAVAYYALLSIVPLLILIAIALSHVVDQDALLASLGRYIGWL 90
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMRS 127
+ I E+ L + + + + +FSS L +++ + R
Sbjct: 91 APGESNVIVKELTNFL-AHREVMGWVLLVTMLFFSSLAFTVLENAMSVIFLHRVAIRRRH 149
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ ++ ++ + Y+ + ++++ V + +F +L +
Sbjct: 150 FLVSAVLPYCYIFCLGLGFLLVTLVAASFQALGDKSIEFLGWSWSLSGFSGVLLYLLGLT 209
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L V+L +P + + L G + + W V + Y T S +Y L +
Sbjct: 210 GEIFVLTSVYLVMPVGQLSLRRALIGGVTAALLWEVTRHVLVWYFATLSQVGVVYGSLTT 269
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
+ L+ L + +LGA++ +
Sbjct: 270 AIVVLLSLEIAATLLLLGAQVISEYER 296
>gi|291447192|ref|ZP_06586582.1| membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291350139|gb|EFE77043.1| membrane protein [Streptomyces roseosporus NRRL 15998]
Length = 330
Score = 92.0 bits (227), Expect = 9e-17, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 95/265 (35%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ I+ + L++FP I GA +A L + + + T+ D +
Sbjct: 32 HAWRSYERLDRVHWARLAAAITFISFLALFPLIAVGAAIAAALLSDKQLDTIKDKLADQV 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SW 128
P + + D ++ A + ++ + V ++R L + + +++ +
Sbjct: 92 PGISDQLGIDGLV----ANAGTVGLVAGALLLFTGVGWVGSMRECLRAVWELDDVQEANP 147
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ ++ ++ V +A+ + +
Sbjct: 148 VVAKVKDAVLLVGLGGAVLATVAVSSIGSVAVGRTADLIGIPEGGAGGVLLRVAALVVAV 207
Query: 189 L--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F+ L+++ LP + ++ + + + + +L Y+ + S MY
Sbjct: 208 VADFLLLLYLLTLLPGVEPPRRRLVVAALLGAVGFELLKLLLGSYMREVAGKS-MYGAFG 266
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 267 VPIALLLWINFTAKLLLFCAAWTAT 291
>gi|111656939|ref|ZP_01407757.1| hypothetical protein SpneT_02001818 [Streptococcus pneumoniae
TIGR4]
Length = 269
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/252 (20%), Positives = 104/252 (41%), Gaps = 5/252 (1%)
Query: 30 HISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVP 89
++ L+S+FP ++ N+ + V + + P + + + +VL P
Sbjct: 15 AVAYYWLISIFPLLLVVVNILPYFQIP--VGEFLGFMKDVLPPSLYEGVEKIAREVLTQP 72
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
+ GL + S L+A + S + L+ + N+AY V + R +++S +
Sbjct: 73 STGLLSFSVLSALWSFSKSMNFLQKAFNKAYGVEKSRGLISHQMLSLLVSFGLQLLFAFA 132
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA-AKSKIM 208
F+ + + LA + ++ G + + LF L+ ++ FLP + KI
Sbjct: 133 LFLILFGQMILALLAHYWTKDGIIYQALQGLAGPLIYALLFAILVMLYYFLPNLSNRKIS 192
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI--MTCLVFLYMLGVFFILGA 266
LPG F + + LF+ Y+ + + L S+ + + + ++ ILGA
Sbjct: 193 YTLPGSAFVLLVILGLLTLFSSYLNYYVHHLVDVRILGSVLLVVMMFWFILIAKIVILGA 252
Query: 267 ELNASMIIYYWR 278
+NASM
Sbjct: 253 VINASMQSLKDP 264
>gi|126660037|ref|ZP_01731159.1| serum resistance locus; BrkB [Cyanothece sp. CCY0110]
gi|126618715|gb|EAZ89462.1| serum resistance locus; BrkB [Cyanothece sp. CCY0110]
Length = 275
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/274 (13%), Positives = 94/274 (34%), Gaps = 18/274 (6%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPEVIAKPITDE 81
M + +S A+ S+FP ++ ++ G + ++ P + +
Sbjct: 1 CIEMGAALSYYAIFSLFPILLVILSITGLILGPDTNAYTQILVFAKRGLPLEAYRIVEST 60
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS------ 135
++Q+ + G I +S AL ++++ ++V + +
Sbjct: 61 LVQL-NESSLGAGIIGFSILFITASRIFRALGRAVDKIWKVYHHNYTRNGWIWTIINFIQ 119
Query: 136 ---------FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
L V+L+ + V + + + + + + ++ T
Sbjct: 120 NQIIAFLLVLSSTALLLVSLLSNIALKVFLKIIKNVEQVITWFRVDEAFLWNSLQLGVTF 179
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L ++ ++ LPA K K I G + + + + L ++ ++ Y +
Sbjct: 180 FLLTSVVMVLYKTLPATKVKWSDIWIGALISVSLFSLLQSLVSNGVIRIGEQFRAYGIVG 239
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M L+++++ F LG E + +K
Sbjct: 240 GFMVLLLWIFLTCQIFFLGCEFTYVYTHLFGSRK 273
>gi|224437776|ref|ZP_03658723.1| tRNA-processing ribonuclease BN [Helicobacter cinaedi CCUG 18818]
gi|313144222|ref|ZP_07806415.1| tRNA-processing ribonuclease BN [Helicobacter cinaedi CCUG 18818]
gi|313129253|gb|EFR46870.1| tRNA-processing ribonuclease BN [Helicobacter cinaedi CCUG 18818]
Length = 294
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 85/264 (32%), Gaps = 12/264 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+E F +V+D + +++ A+ +S + ++ P ++ ++ L Q
Sbjct: 17 QEVFTLVWDKLKSIWNFVADKELSFYAASLSFYTIFAIIPLLMIFFSIFVNLPNFQSQIE 76
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I + + + L + L + S +
Sbjct: 77 QIRTLILSNILPTHTEVISSYLDTFMQNSSALGMMGLGYTLIASIMFFRNYEY-IAAKMF 135
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R ++ + ++ + + L V L + + L +
Sbjct: 136 NSTPRKFFDSLVMYWTMITLFPVVLAFSIYFSGEVQKTLKGTAD-----------LSVLF 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L +I + KI+++L + T W++ F +Y+ TY ++
Sbjct: 185 DLIPYLLTWIMFFLLFKLSANKPLKILALLVSSVLTTAVWLITKWGFVYYVFYNETYKSV 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILG 265
Y ++ + ++++Y+ + G
Sbjct: 245 YGPISIFLFMMLWIYISWFVLLYG 268
>gi|262067435|ref|ZP_06027047.1| ribonuclease BN [Fusobacterium periodonticum ATCC 33693]
gi|291378798|gb|EFE86316.1| ribonuclease BN [Fusobacterium periodonticum ATCC 33693]
Length = 416
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 91/262 (34%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L+ + GA ++ I +
Sbjct: 22 VKRAYEKYKGANSSFWVTSLSFYTILAIVPILAILVSLSSWFGAKDYIIDQIKDIAPLKG 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + ++ + L + + + S N + + + RS
Sbjct: 82 ETLELLTDFSNNLLMDARSNVLAGVGFIFLGSTFIKMFSLIEESFNEIWHIKKSRSLIRK 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + + ++ + + + ++ + + + + ++ I
Sbjct: 142 ISDYISFFIFLPLLFITLNGLSLFF----------LSKIKDIGFLYYLIKNLLPLFSMTI 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ L +P K+ L I +++++ +F YST+Y + I
Sbjct: 192 FFTALFLVMPNTTVKVFPALVASIIVSVAFLMFQYIFILLQFLLIGYSTVYGSFSVIFIF 251
Query: 252 LVFLYMLGVFFILGAELNASMI 273
++++ + ILG ++ +
Sbjct: 252 IIWIRIFWFIVILGVHISYLIQ 273
>gi|116071444|ref|ZP_01468713.1| serum resistance locus BrkB-like protein [Synechococcus sp. BL107]
gi|116066849|gb|EAU72606.1| serum resistance locus BrkB-like protein [Synechococcus sp. BL107]
Length = 313
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/297 (14%), Positives = 111/297 (37%), Gaps = 20/297 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVP 60
++ F ++ A + + + +++ + L S FP ++ ++A G +
Sbjct: 7 KQAFRRFVLSLWHASQRWNDASCVDLSAAFAYFTLQSFFPLLLIALSVAARIFGRTDSLD 66
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I V P + + ++A + + +SN L+ +R +
Sbjct: 67 QLIIFVAQILPPSAVDLVDSTLRGLVAQGFGA-GLFGVVVLVFTASNAYLTLQRGADRLW 125
Query: 121 R------------VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+++ + TRL +F +L +V ++ L A++
Sbjct: 126 SAILPPASMDIPVSMQVYQFLRTRLEAFFIILAIAVLILTDQIAAGFRWLPEAFIGNLDY 185
Query: 169 ALGNLLLIIW------NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ +L+L++ G+I AL + + + LP+ + IM ++PG I +
Sbjct: 186 YIPSLMLLVRESPIVSIGQILLPASALSLMALLLQRVLPSRRVPIMPLIPGSILIGLGLS 245
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + + +V+ Y + ++ ++++++GV G + + +
Sbjct: 246 LLNISLSLSLVSLGNRFQAYGVIGGVLVLTLWVWLVGVIVYFGQCWSVELAASRIKH 302
>gi|189218115|ref|YP_001938757.1| Ribonuclease BN family enzyme [Methylacidiphilum infernorum V4]
gi|189184973|gb|ACD82158.1| Ribonuclease BN family enzyme [Methylacidiphilum infernorum V4]
Length = 297
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/278 (16%), Positives = 99/278 (35%), Gaps = 6/278 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+F++ AI + + + M + +S L S+ P I+ ++A F V I
Sbjct: 2 RFLFNLFKGAIWRWTKHNDSKMGAALSCYILFSIIPLILVLVSVASFFVDPVKVNQEIIF 61
Query: 66 VFGAWPEVIAKPIT---DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+F + I + + + +S L+ SLN + +
Sbjct: 62 IFLQILGEESINILKNYQIHASIGFWRNPQTSLTVIFSLVFGASGAFIELQKSLNEIWEI 121
Query: 123 VEMRS--WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + F + ++ +++ + L L I G
Sbjct: 122 GPGKEAGLWHVVRKQFLSFFIVFLSGLLLLLFLLLSTTFLETATFIREFSPGLKKYIPEG 181
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+A++LA F+ ++ LP AK + G F+ + +G L + S ++
Sbjct: 182 IQFASLLAEFLIFSLLYKILPDAKVYFKDVWFGAAFSTLLIFLGKSLL-WIALRKSAVAS 240
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y S++ L++++ F GAEL+ + R
Sbjct: 241 IYGAGGSVIMLLLWIFYCSQIFFFGAELSREYALLKAR 278
>gi|309812533|ref|ZP_07706281.1| YihY family protein [Dermacoccus sp. Ellin185]
gi|308433511|gb|EFP57395.1| YihY family protein [Dermacoccus sp. Ellin185]
Length = 368
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 21/268 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
I FV++ G +A+ I+ LS+FP ++ ++ GF+ G + ++D V P
Sbjct: 23 VIYKFVDDQGAYLAALITYYGFLSIFPLLLLLQSVLGFVIDGDDRLRQQILDSVLAQIPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + I + + I A+ A Y +A++ + N + V
Sbjct: 83 LGPSLHSASIESL--TGSVSAIVIGAIVALYGGLGVAQAIQHTSNHCWAVPRNSRPN--- 137
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
++M AI + L L L + + ++
Sbjct: 138 -------------PILMRVRSGAIIMFLGAALIAIGILPTLWKPLQSWAWLLNVVFGTGI 184
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST-MYAGLASIMTC 251
+ + A + PG F +W T + F ST Y I+T
Sbjct: 185 FLLLMKMTNARGEGWGRLAPGAFFISFAWQFFVANSTTFTNIFGARSTGTYGTYGGILTL 244
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L+ Y++ + F++G E+N + + + +
Sbjct: 245 LLASYLMSLSFVIGTEINVVLHKHLYPR 272
>gi|325918192|ref|ZP_08180341.1| putative membrane protein [Xanthomonas vesicatoria ATCC 35937]
gi|325535599|gb|EGD07446.1| putative membrane protein [Xanthomonas vesicatoria ATCC 35937]
Length = 322
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/286 (17%), Positives = 98/286 (34%), Gaps = 19/286 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + + + F+E D A+ +S ALLS+ ++
Sbjct: 15 KHVSRLQRSVPMALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQDA 73
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRA 119
++ V A+ I P G S L ++ L+ +LN
Sbjct: 74 LVQQVAQLAGGSAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLI 133
Query: 120 YRVVEMR-----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+R + R +W R+ SFG +L L++ A+ + A + P
Sbjct: 134 FRTDKQRLDGLMAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP------ 187
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
T+ + F++ +LP G + T + + +G YI T
Sbjct: 188 ----AVGYVTTLALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFALGRYAIGVYIAT 243
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ S Y + +++ LV++Y V F +GA + A + +
Sbjct: 244 AAPGSA-YGSMGTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 288
>gi|295093026|emb|CBK82117.1| Predicted membrane protein [Coprococcus sp. ART55/1]
Length = 330
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 54/276 (19%), Positives = 120/276 (43%), Gaps = 9/276 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ +++ + + ++ A A+ + LLS+FP + +L +
Sbjct: 3 LKKRIVLIYHKVRLFMAEMNKDQVAAFAAQSAFFLLLSLFPLAMTLLTFVKYLPFTET-- 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRA 119
V++++ +PE I ++ + L T + + + +S G A+ L
Sbjct: 61 QVLEIIKELFPEEINSNFEFMFAEIFDSKSSLLATTATILLTVWSASKGTMAIGRGLTFM 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYV------RKFFPALGNL 173
+ ++++ R I Y L+ V LV + +++ + ++ + + F + +
Sbjct: 121 AGKEDSVNYFLRRAIHTLYTLIFCVMLVAVMVIYILGDVVVSKMLVRLDSVERFQLVDTV 180
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+ +I LF +I + LP + +I + +PG FT I W++ + + YI
Sbjct: 181 ANILSIVKIAFAPTVLFGVMIVAYWALPVERVRIKTAVPGAAFTTILWMLLSFGVSSYIN 240
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ MY LAS++ ++LYM ++GAE+N
Sbjct: 241 IVGINTYMYGSLASVILLALWLYMCMYVMLIGAEIN 276
>gi|285017226|ref|YP_003374937.1| hypothetical protein XALc_0414 [Xanthomonas albilineans GPE PC73]
gi|283472444|emb|CBA14949.1| hypothetical protein XALc_0414 [Xanthomonas albilineans]
Length = 314
Score = 91.6 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/274 (18%), Positives = 95/274 (34%), Gaps = 19/274 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
F E D A+ +S ALLS+ ++ Q +I +
Sbjct: 35 LARRFTEIDLMTQAASLSFYALLSLA-PLLVLLLWLTASLYPQAQQALIAQIGQLAGNGA 93
Query: 75 AKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
I P G S L ++ L+ +LN +R + +
Sbjct: 94 RDVAQTVIDNAKHQPNIGSLAGLWSTLLLFVGATAVFAQLQNALNLIFRTDKQQLDGFLP 153
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ SFG V L+I + + +A A + P ++T+
Sbjct: 154 WLKKRVFSFGVVFALGFLLLISMILTTVLQVAFARMPSLLP----------AVGYFSTLA 203
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ ++ +LP + + + G T +V+G YI T + S Y + +
Sbjct: 204 IYVLAFAVLYHYLPDRRVEWRQAIIGGAITACLFVIGRYAIGVYIATAAPGSA-YGSMGA 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ LV++Y V F +GA + A + ++P
Sbjct: 263 PVILLVWIYYATVVFFVGALITAVIDERQRARRP 296
>gi|294495615|ref|YP_003542108.1| ribonuclease BN [Methanohalophilus mahii DSM 5219]
gi|292666614|gb|ADE36463.1| ribonuclease BN [Methanohalophilus mahii DSM 5219]
Length = 281
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 101/275 (36%), Gaps = 5/275 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + + H+ E+DG ++ +S ++S+ ++F ++ + + + + I
Sbjct: 7 LFRETLSHWNEDDGMTSSAALSFYLIVSLPAILLFSVSVGSYFLKARHLESAIIGYIDLM 66
Query: 71 PEVIAKPITDEILQV--LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMR 126
+ + +L TIS L + N + ++ + V E
Sbjct: 67 AGDTLIHMVEILLNQIPDIASLTAGATISFLLLVWAGGNLFRQFKKIIDNMWGVSSTESD 126
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ SF V+ V ++ + L L L I+ ++
Sbjct: 127 WLHNFLKKSFASVIGVFVVGFLLVLNTLVEAFFLMGYGLLSELLPFNLRILQYASSFSNF 186
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L + I+V+ LP A+ + +L G FT + F Y+ +T+Y +
Sbjct: 187 LILLMLFIYVYRVLPEARIDMRYVLEGSFFTVSLITIAKYFFAFYLSH-GNITTVYGAIG 245
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
SI+ L+++Y + AE+ R+KP
Sbjct: 246 SIIGFLLWVYFSFIAVTFAAEMINVRSKNVSREKP 280
>gi|311743490|ref|ZP_07717296.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
gi|311312620|gb|EFQ82531.1| ribonuclease BN [Aeromicrobium marinum DSM 15272]
Length = 361
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/250 (15%), Positives = 90/250 (36%), Gaps = 12/250 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ + ++ G +A+ I+ + +++FP ++ ++ GFL G ++D +P
Sbjct: 45 VVYKYFDDQGPYLAAIIAYYSFIAIFPILLISTSVLGFLLQGDPGLSDRLLDTALSQFPI 104
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
V + E + G + +LAA Y + ++ + + N A+ V +R
Sbjct: 105 VGDQLGRPE----GLTGSTGAIVVGSLAALYGALGLGQSTQNAANIAWSVPRN-----SR 155
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
F L + + L + I + + + I +
Sbjct: 156 ANPFLMRLKSLILLATAGVGILVIAVGSSVLANAQSINETFSDEINLALRIVGFVLSVGI 215
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLASIMTC 251
+ + A + + +L G T W + Y+ +T S+M A ++
Sbjct: 216 FWALFRLVSAGRGRWPYLLAGAAVTAGLWQLLQWAGQAYVSNVINTASSMNGTFALVLGL 275
Query: 252 LVFLYMLGVF 261
+ F+Y+ +
Sbjct: 276 IAFIYVAALM 285
>gi|162454801|ref|YP_001617168.1| putative tRNA processing ribonuclease BN [Sorangium cellulosum 'So
ce 56']
gi|161165383|emb|CAN96688.1| putative tRNA processing ribonuclease BN [Sorangium cellulosum 'So
ce 56']
Length = 368
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 101/265 (38%), Gaps = 16/265 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ I +G AS ++ A LS+ P F + + ++ V+ + A P
Sbjct: 32 VWSVIVSLDRHNGPRAASAMAFDAFLSLIPLAAFAGYVLSRV--QRWSDVVVRPILQAAP 89
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+A +++E++++ + + IS + +S+G+ + Y E +
Sbjct: 90 PDVATLVSEELIRL--SQSSAVAPISITGFLWITSSGISTAMGVFDTIYNTRERPWYVRR 147
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + +A+ +A V L L + +
Sbjct: 148 AIAA------------ACVMASLAVVPVVAGVGVLIGTLSGSTGARIVAFALPGGLVICM 195
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
F + + + I PG + T + W + LF+ Y+ T Y+T Y LA++
Sbjct: 196 VAAFFRISIQRPNIERRRIFPGAVLTVVLWSAVSTLFSLYVATLGRYATFYGSLATVAIF 255
Query: 252 LVFLYMLGVFFILGAELNASMIIYY 276
L +L++L + ++G ELNA +
Sbjct: 256 LFWLWLLALALLIGGELNARLERER 280
>gi|323527971|ref|YP_004230123.1| ribonuclease BN [Burkholderia sp. CCGE1001]
gi|323384973|gb|ADX57063.1| ribonuclease BN [Burkholderia sp. CCGE1001]
Length = 300
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/270 (16%), Positives = 98/270 (36%), Gaps = 6/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV-FGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ F G +A ++ ALLS+ P ++ L+ + H +P + ++
Sbjct: 18 RFTLETLKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRVVPQHVLLPALGHLLRW 77
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN---RAYRVVEM 125
P + + + + + + +FSS L +++ V+
Sbjct: 78 LVPGQSRALVHELANFL--AHRAVIGWVLFVTMLFFSSLAFTVLENAMSLIFVHRVVIRR 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ L+ + Y+L + +I++ V + A F +L
Sbjct: 136 RHFLLSALLPYCYILFLGIGALIVTVVSTGLEAVGAEGVDLFGTYVSLQGPSRVLLYLLG 195
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L +++ +P + + L G I + W + + Y T S S +Y L
Sbjct: 196 LAGEIFVLTSIYMVMPVGRPSLKHALFGGIVAAVLWEITRHVLVWYFATLSQVSVVYGSL 255
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L L L + GA++ A +
Sbjct: 256 TMAIVILFSLEWLATLLLFGAQVIAQYERF 285
>gi|300784460|ref|YP_003764751.1| tRNA-processing ribonuclease BN [Amycolatopsis mediterranei U32]
gi|299793974|gb|ADJ44349.1| tRNA-processing ribonuclease BN [Amycolatopsis mediterranei U32]
Length = 340
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 96/270 (35%), Gaps = 7/270 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVID 64
D I A +++ G+ + I+ +LLS+ P ++ +++ GF+ + T++
Sbjct: 20 RWLDHIARATNRYIDAGGYHYVASITYFSLLSLVPLLMVASSVGGFVLATQPHLLDTLVH 79
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + T+ + + + + Y N + ALR SL +
Sbjct: 80 AIVSTLPGGLGDKATELLTGFVE-QRTSVGVVGLGIGLYSGWNWMNALRDSLTALWGQNR 138
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNGR 181
+ LL +++SF AL L + ++
Sbjct: 139 SDQSLPRLIAVDLLALLGLTAALLVSFTLTISGTALGSYLLRLAGLDDTSWGHQLVSASS 198
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ A ++ ++V LP K + S + G + + + V + Y+ S
Sbjct: 199 VPLSLAADWLVFLWVLTRLPRQKVGVRSAIRGAVALAVGFEVLKLAGGFYLRLIGD-SPT 257
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
SI+ + F+ ++ + A+
Sbjct: 258 GIAFGSIIGLIFFISLVARLLVFVTAWTAT 287
>gi|294782534|ref|ZP_06747860.1| ribonuclease BN [Fusobacterium sp. 1_1_41FAA]
gi|294481175|gb|EFG28950.1| ribonuclease BN [Fusobacterium sp. 1_1_41FAA]
Length = 416
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 89/262 (33%), Gaps = 10/262 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A E + + + +S +L++ P + +L + GA ++ I +
Sbjct: 22 LKRAYEKYKGANSSFWVTSLSFYTILAIVPILAILVSLGSWFGAKDYIINQIKDIAPLKG 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + ++ + L + + + + N + + + RS
Sbjct: 82 ETLELLTDFSNNLLMDARSNVLAGVGFIFLGSTFIKMFSLIEDAFNEIWHIKKSRSLIRK 141
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + + ++ + + + ++ + + + +L++ I
Sbjct: 142 ISDYISFFIFLPLVFITLNGISLFF----------LAKIKDIGFLYYLIKNILPLLSMTI 191
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
V L +P K+ L I +++ + +F YST+Y + I
Sbjct: 192 FFTAVFLVMPNTTVKVFPALVASIIVSVAFFMFQYIFILLQFLLIGYSTVYGSFSVIFIF 251
Query: 252 LVFLYMLGVFFILGAELNASMI 273
++++ + ILG + +
Sbjct: 252 IIWIRIFWFIVILGVHICYLIQ 273
>gi|15827290|ref|NP_301553.1| hypothetical protein ML0687 [Mycobacterium leprae TN]
gi|221229768|ref|YP_002503184.1| hypothetical protein MLBr_00687 [Mycobacterium leprae Br4923]
gi|467174|gb|AAA17332.1| u0308aa [Mycobacterium leprae]
gi|13092839|emb|CAC30196.1| putative membrane protein [Mycobacterium leprae]
gi|219932875|emb|CAR70781.1| putative membrane protein [Mycobacterium leprae Br4923]
Length = 313
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 102/278 (36%), Gaps = 10/278 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQF 58
+R F + D + A + F E +G A+ ++ + ++FP ++ ++ G +
Sbjct: 13 LRGRFRWL-DHVVRAHQRFDERNGSFFAAGLTYYTIFALFPMLMVSFSVVGLVLFRRPEL 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T+ D + A + + + D + + + + + AA+ + R +L +
Sbjct: 72 LTTIDDHIRSAVSSQLGQELVDLMNRAIDA-RASVGVVGLATAAWAGLCWMSHFRAALTK 130
Query: 119 AY--RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-- 174
+ ++ S +L ++ V + + V A + +
Sbjct: 131 MWWEHHIDPSSLLRNKLSDLLAMVGTFVVFLTTLALTVLSHQAPMAAILRCIGITHFFVF 190
Query: 175 -LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+I + + L ++ ++ +LP +++ + G + + + + + + Y+
Sbjct: 191 GVIFQGASVLVSTLVSWLLFTWMIAWLPRKSVNLVASMRGGLIAAVGFELFKQVGSIYLQ 250
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
S + ++ +VF Y + A A+
Sbjct: 251 IVL-RSPAGSVFGPVLGVMVFSYFTAYLVLFAASWAAT 287
>gi|317968038|ref|ZP_07969428.1| serum resistance locus BrkB-like protein [Synechococcus sp. CB0205]
Length = 301
Score = 91.3 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 100/293 (34%), Gaps = 19/293 (6%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVP 60
+ + + A + ED +++ + +L S FP ++ +AG +
Sbjct: 6 RRWRAIVKPFWKAYRLWDREDCVDLSAAFAYHSLQSFFPILLIALGVAGLVLGRMDGLAD 65
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI V P ++ +L++ G I + S+N +L+ +R +
Sbjct: 66 QVIAVADQFLPPSALPLVSTTLLRLY-KQGTGAGLIGVIFLVISSTNAYLSLQRGADRLW 124
Query: 121 R---VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
++ + + F + S+ +V++ FV + +R P LLL
Sbjct: 125 GFRPILTPPENWKKPVWKFIRNRIESLVVVVLIGFFVVLDQITTNLRLLKPGSWRLLLES 184
Query: 178 WN-------------GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
W + +++ + F+P + + ++PG + +
Sbjct: 185 WLPAKLHLWAPVPLLVDLGISVIISCSLAFVLLAFMPTRRVPLRPLIPGSLLIGSALTAL 244
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +++ Y + ++ ++++++ + G L+
Sbjct: 245 NLALGRSLISLGARFQAYGVIGGVLVLSLWVWLVALVVYYGMALSVVCSKRRE 297
>gi|258646090|ref|ZP_05733559.1| YihY family protein [Dialister invisus DSM 15470]
gi|260403466|gb|EEW97013.1| YihY family protein [Dialister invisus DSM 15470]
Length = 283
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 105/272 (38%), Gaps = 5/272 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I I+ ++++D + AS S +L + PF++F N F A Q I +
Sbjct: 13 FIKCLIKRYIDDDVGSFASEASYCFILGLIPFMIFLVNCILFFAAPQL--DTILDLLQYL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR-AYRVVEMRSWY 129
P A + + I +++A + AA + +S G L +++ ++ ++SW
Sbjct: 71 PAQFAASMEENIARIIAGRSTIWLFAGLGAAVWTASQGTAVLVRGMDKIFFQDRNIQSWL 130
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN-GRIYATMLA 188
L + + + +++ + V + V+ + L ++ +W R +
Sbjct: 131 KVSLKACFFTVFLVFAMILSLTLIVFANAVIFLVQDYIMDLPSVFWQVWRPSRYAIPFVV 190
Query: 189 LFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + L + + P K I+P + + + +YI+ S Y L
Sbjct: 191 MSLSLSAFYRYAPNRYITKWTRIIPASFLVAAALLFLTAGYGYYILHISGMGVTYGSLIG 250
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ +++++ + G + + R+
Sbjct: 251 LIFLFLWIHLAVQIILAGGAVIMAWEDMRHRR 282
>gi|269303063|gb|ACZ33163.1| YihY family protein [Chlamydophila pneumoniae LPCoLN]
Length = 430
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 96/268 (35%), Gaps = 1/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I +I+ + + A +S LL+ P +VF L+ L + + + F
Sbjct: 24 LLQAIIQSIKVLLHNEASKEACVLSYYGLLTCVPILVFFLRLSQHLFTNLNWKEWLIIKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + I + + S + + +L LN+ +R
Sbjct: 84 PDYKKPIVAIVEAAY-HATESNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTSWTPI 142
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ F L++ + +I+ ++ I + +L + + ++ + L
Sbjct: 143 SLKRLVSYFVITLVSPMIFIIVCGSWIYITQIMPIQYAKLFSLSHSMTALYFISRFVPYL 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L++ L + FLP + S L + W+V F V+ YS Y L +
Sbjct: 203 LLYLALFCCYAFLPRVAIQKTSALISTLIIGSVWIVFQKAFFSLQVSIFNYSFTYGALVA 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + L+ LY+ + ++ G L +
Sbjct: 263 LPSFLLLLYIYAMIYLFGGALTFIIQNR 290
>gi|91787411|ref|YP_548363.1| ribonuclease BN [Polaromonas sp. JS666]
gi|91696636|gb|ABE43465.1| ribonuclease BN [Polaromonas sp. JS666]
Length = 321
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 97/284 (34%), Gaps = 6/284 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP- 60
R ++ + A++ ++E DG M++ +S +LS+ P +V + G+ +
Sbjct: 31 RHRLQHIYRPLRRAVDQWIEADGLRMSAAMSFYGILSLAPLLVLLVAVLGWWVEQSVIEI 90
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRA 119
+++D + A+ + + ++ A ++ L+ + R
Sbjct: 91 SLVDQIRSVVGAQGAQVVQQALSSAREPSQGIAASLFAFGLLLSGATGVFSELQDAFERL 150
Query: 120 YRVVEMRSWYITRLISFGYVL---LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+R + + L + + + V + + L + + +
Sbjct: 151 WRQGSGKPPQQKWWYTASLRLRGVAYILAIGFLLLVSLVVSTLLNLLSGWAGGYWPVEKF 210
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ A+ + + K + ++ G + + VG L Y+ T +
Sbjct: 211 AYAINEVASFGFSVALFVALMRMSAGPKPALRYLVRGAAVGALLFAVGKHLMAFYLSTAA 270
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
S Y S++ L+++Y +L A + + ++
Sbjct: 271 VVSA-YGAAGSLVVILMWIYFSSAVLLLAASIARAWADEARERE 313
>gi|322385717|ref|ZP_08059361.1| ribonuclease BN [Streptococcus cristatus ATCC 51100]
gi|321270455|gb|EFX53371.1| ribonuclease BN [Streptococcus cristatus ATCC 51100]
Length = 306
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/273 (20%), Positives = 108/273 (39%), Gaps = 5/273 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ + + + + ++ L+S+FP ++ AN+ + ++ +
Sbjct: 12 EFLRAFFHFYQASEADITSIAVAYYFLISIFPLLLIAANILPYFQIRP--DELLVALKDL 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I + VL P+ GL +IS L+A + S + L+ + N+ Y + R
Sbjct: 70 LPESLYLTIAKVVRDVLTKPSTGLLSISILSALWTFSQSMTFLQKAFNKCYGTKQGRGLI 129
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ +F L V L + + + + + + F+ L + L L
Sbjct: 130 WERIFAFIMSLGLQVLLGLSLVLTLFGRMLVGILYDFWHFDRGLYQQLLTMTEPTIYLML 189
Query: 190 FIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTY--STMYAGLA 246
F+ LI ++ LP K I +LPG + LFT YI + + G
Sbjct: 190 FLSLILLYFSLPNVKIPKIRYVLPGATLVLVIIYSLMNLFTVYIEAYLDRFLDVRFVGSV 249
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + + ++ I+GA LNAS+ +
Sbjct: 250 VVVIIMFWFILIAKVLIVGAVLNASIQSRFVSH 282
>gi|239943732|ref|ZP_04695669.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
gi|239990181|ref|ZP_04710845.1| putative integral membrane protein [Streptomyces roseosporus NRRL
11379]
Length = 319
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 95/265 (35%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ I+ + L++FP I GA +A L + + + T+ D +
Sbjct: 21 HAWRSYERLDRVHWARLAAAITFISFLALFPLIAVGAAIAAALLSDKQLDTIKDKLADQV 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR--SW 128
P + + D ++ A + ++ + V ++R L + + +++ +
Sbjct: 81 PGISDQLGIDGLV----ANAGTVGLVAGALLLFTGVGWVGSMRECLRAVWELDDVQEANP 136
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ ++ ++ V +A+ + +
Sbjct: 137 VVAKVKDAVLLVGLGGAVLATVAVSSIGSVAVGRTADLIGIPEGGAGGVLLRVAALVVAV 196
Query: 189 L--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ F+ L+++ LP + ++ + + + + +L Y+ + S MY
Sbjct: 197 VADFLLLLYLLTLLPGVEPPRRRLVVAALLGAVGFELLKLLLGSYMREVAGKS-MYGAFG 255
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 256 VPIALLLWINFTAKLLLFCAAWTAT 280
>gi|300870971|ref|YP_003785842.1| ribonuclease BN [Brachyspira pilosicoli 95/1000]
gi|300688670|gb|ADK31341.1| ribonuclease BN, putative [Brachyspira pilosicoli 95/1000]
Length = 539
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/242 (13%), Positives = 86/242 (35%), Gaps = 9/242 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
+F ++ +I AI F ++D A+ ++ LS P ++ G + +Q + +
Sbjct: 32 RFFINLYRVITFAITDFFKDDCTIRAASLTYLVTLSFIPALIVGLFVLRIFNIYQNIFIL 91
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I + + I ++ +S + ++ SL + +RV
Sbjct: 92 IFDWMEKNAPFYEPMVRQILNIADNTDLASFGIIGVISTLISASLILHNIQKSLIKIWRV 151
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
S + ++L V++ I + +AL Y+ ++
Sbjct: 152 KIRTSIPRVAVNYIALLILIPVSIGISFTLITYSSIALYYLP---------AIVRILISW 202
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
++A+ + ++F ++ +P K + L + I+ + ++ + Y ++
Sbjct: 203 VTPVIAMSLLVLFSYVLVPQTKVNWSNALISSVLVAIAIITLFSVYFKLNINVKNYKQIF 262
Query: 243 AG 244
Sbjct: 263 DS 264
Score = 39.3 bits (90), Expect = 0.73, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A I L+ LY++ + + GAEL S+ +
Sbjct: 366 AFAQIPVLLLLLYIVWIIILFGAELTYSLQYFR 398
>gi|84625563|ref|YP_452935.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84369503|dbj|BAE70661.1| ribonuclease BN [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 299
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 95/275 (34%), Gaps = 19/275 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F+E D A+ +S ALLS+ ++ ++ V
Sbjct: 1 MALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEALVQQVAQLAGG 59
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A+ I P G S L ++ L+ +LN +R + R
Sbjct: 60 SAAEVAQTIIRNATDQPGVGSLAGLWSTLLLFIGATAVFAQLQNALNLIFRTDKERLDGL 119
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG +L L++ A+ + A + P T
Sbjct: 120 MAWLKKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP----------AVGYVTT 169
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + F++ +LP G + T + + +G YI T + S Y +
Sbjct: 170 LALYSLAFAFLYRYLPDRTVDWRQAFLGGVITALLFTLGRYAIGVYIATAAPGSA-YGSM 228
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ LV++Y V F +GA + A + +
Sbjct: 229 GTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 263
>gi|331091481|ref|ZP_08340319.1| hypothetical protein HMPREF9477_00962 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404037|gb|EGG83587.1| hypothetical protein HMPREF9477_00962 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 271
Score = 90.9 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 7/270 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+++ + ++ + A A+ + +LS+ P I+ L + +
Sbjct: 1 MKKWLKKINQLLAADAN----DHTSAYAAMSAFFFVLSLIPIILLLLTLVQYTSLTKV-- 54
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ V P+ I I + QV + + I+ L A + + GV A+ LN Y
Sbjct: 55 DVMSAVAQVVPDSITPTILAIVNQVY-NQSAAVIPITILVALWSAGRGVLAVTSGLNWIY 113
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E R+++ R+ + Y +L V +V+ V +V P ++ +
Sbjct: 114 DSRETRNYFYLRIRATFYTVLFIVVIVLTLVVLGFGNSISLFVEAHIPLASHITKFMIEI 173
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
R A AL + + ++ FLP + K +S LPG +FT + W++ + + Y+ F +
Sbjct: 174 RTIAAFFALLVFSLCIYKFLPNRRDKFLSQLPGSLFTSVGWLLTSFFVSKYMEIFKGFED 233
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
MY L +I+ +++LY +LG ++N
Sbjct: 234 MYGSLTTIVLIMLWLYFSMYIMLLGGKVNV 263
>gi|327405552|ref|YP_004346390.1| ribonuclease BN [Fluviicola taffensis DSM 16823]
gi|327321060|gb|AEA45552.1| ribonuclease BN [Fluviicola taffensis DSM 16823]
Length = 311
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 95/275 (34%), Gaps = 9/275 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVP 60
+ + V + F E + + ++ A+ ++ P I + + +G +
Sbjct: 9 KLSWKEVLQLFKTTFVEFFGEKSFFHGAALAYYAVFAIIPIIYLAVISFGSIMGQEAILK 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ ++ + I D + +V + L + +A + SS + +LR+S+N
Sbjct: 69 LIKTLLEEQVGMKDSSGILDFLSEVHFEKSSVILNIVGIIALMFSSSALISSLRMSINEF 128
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL----- 174
Y + T+++ + L SV ++ + + + + +
Sbjct: 129 YDIHVKIDDRKTQILYTILIKLGSVFMLAVFGISIVLLYTGETIFMSISGELYESLHLQQ 188
Query: 175 -LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
I+ + I V+ +L K L G + T VG + Y+
Sbjct: 189 KWIMNLIEHLVAIGINTILFSIVYKYLHDGKVLWKLALSGGLLTSCLLYVGQIGLKFYLT 248
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ S M +++ L ++Y LGA+
Sbjct: 249 KYFFGSQM-GIAGTLLIFLAWMYYSSQIIFLGAKF 282
>gi|300782773|ref|YP_003763064.1| tRNA-processing ribonuclease BN [Amycolatopsis mediterranei U32]
gi|299792287|gb|ADJ42662.1| tRNA-processing ribonuclease BN [Amycolatopsis mediterranei U32]
Length = 336
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/276 (16%), Positives = 105/276 (38%), Gaps = 8/276 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--F 58
+R + + D + A + F E G A+ I+ ++LSVFP + + G + H
Sbjct: 13 LRRKYPWL-DHLIRANDAFTERYGNHYAAAITYFSVLSVFPLFMVAFAVVGLVVNHDKTI 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + D + + PE + + + L G+ L A Y + LR +L
Sbjct: 72 IMKITDGINNSVPEGLKDLVNGIVKGALD-SGGGIGIFGLLIALYSGIGWMSNLRDALTA 130
Query: 119 AYR-VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG--NLLL 175
+ + + L ++ V L++ + ++ + ++
Sbjct: 131 QWGQEKQPQPLVKQTLKDLVALIGLGVALIVSFALTAVGGGVGQFLLELVGLEHATWAIV 190
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ I + A + ++V LP + + S + G + + +V+ + + Y+ +
Sbjct: 191 LLRGATIVLGLAANTLVFLWVIARLPREQVALRSAVKGAVVAAVGFVILQQVGSLYLASV 250
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ S A ++ LVF ++ F +L A+
Sbjct: 251 TK-SPSAALFGPVIGLLVFANLVSRFLLLITAWTAT 285
>gi|32267229|ref|NP_861261.1| tRNA-processing ribonuclease BN [Helicobacter hepaticus ATCC 51449]
gi|32263282|gb|AAP78327.1| tRNA-processing ribonuclease BN [Helicobacter hepaticus ATCC 51449]
Length = 295
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/265 (10%), Positives = 86/265 (32%), Gaps = 14/265 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVP 60
R F I+++ I + +++ A+ +S + ++ P ++ ++ L Q +
Sbjct: 18 RSLFDILWNKIKSIWDFVADKELSFYAASLSFYTVFAIIPLLMIVFSIVMNLPNFQSQIE 77
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++ I+ + + + L + S +
Sbjct: 78 QIRTLILSNILPTHTDVISSYLDTFMKNSS-ALGMMGLGYTLVASIMFFRNYEY-IAAKM 135
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R ++ + L+ + + L + L + + L +
Sbjct: 136 FNSTPRKFFDSLLMYWTMITLFPIVLAFSIYFSGEVQKTLKGTAD-----------LSLL 184
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L + + K++++ + T W++ F +Y+ TY +
Sbjct: 185 FDLIPYLLTWAMFFLLFKLSANKPLKLLALFSSSLLTTSVWLLTKWAFVYYVFYNQTYKS 244
Query: 241 MYAGLASIMTCLVFLYMLGVFFILG 265
+Y +A + ++++Y+ + G
Sbjct: 245 VYGPIAIFLFMMLWIYVSWFVLLYG 269
>gi|256545458|ref|ZP_05472820.1| hypothetical protein HMPREF0078_1077 [Anaerococcus vaginalis ATCC
51170]
gi|256398854|gb|EEU12469.1| hypothetical protein HMPREF0078_1077 [Anaerococcus vaginalis ATCC
51170]
Length = 293
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/278 (19%), Positives = 105/278 (37%), Gaps = 12/278 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
I+ IE D +AS +S L + P ++ NL + VI
Sbjct: 13 FIFTLIERAKSHDIMTLASSLSYYFLSAAIPMLLVLLNLVT--KYMKGNEDVIVEFIELL 70
Query: 71 PEVIAKPITDEILQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE I I + ++ + L TI+ + A + +S GV + +++N AY + + S
Sbjct: 71 PETIRGVILMLVKSIINSSSVSTLSTITLIFALWSASKGVSKIILAINVAYGLEDDHSMI 130
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA---------LGNLLLIIWNG 180
++ F Y + L+ + + + L + L+ ++
Sbjct: 131 KNKIFGFLYTFILIFILIFLFLLRIYSNGILNLIENVLQLVNSSFSLEEFTWLINLVSGI 190
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++ L + + K G I T I + + ++ ++ S S
Sbjct: 191 LPPIILILGLSLLYKCAPYNNSIKISFKDAFVGSISTTIMITITSFAYSFFLNNMSNMSV 250
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y LA I+ LV++ + + ILGAE+ A+ + +
Sbjct: 251 IYGALAGIIALLVWMLLFSLTIILGAEIIAAYMKTKNK 288
>gi|319785806|ref|YP_004145281.1| ribonuclease BN [Pseudoxanthomonas suwonensis 11-1]
gi|317464318|gb|ADV26050.1| ribonuclease BN [Pseudoxanthomonas suwonensis 11-1]
Length = 311
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/273 (18%), Positives = 98/273 (35%), Gaps = 19/273 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ FVE D A+ +S LLS+ ++ +++D + E
Sbjct: 24 LVKRFVEADLMTQAASLSFYTLLSLA-PLLVLLLWLTASLYPPAQQSLVDQIGALAGEQA 82
Query: 75 AKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR-----S 127
A I + P G S ++ L+ +LN +R + +
Sbjct: 83 AVVAETIIRNADSQPDVGSLAGLASTGLLFVGATVVFAQLQGALNLIFRTGGEKLGGLGA 142
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
W R+ S G VL L++ A+ L A + P T++
Sbjct: 143 WLRKRVFSLGVVLALGFLLIVSMIATTALQLVFARIPSLLP----------VVGYVTTLV 192
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ F++ FLP + L G + T + + +G L Y+ + S Y + +
Sbjct: 193 LYALAFAFLYHFLPDRRVDWRQALLGGVITSVLFALGRYLIGLYLAQAAPGSA-YGSMGA 251
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ L+++Y + F GA + A + ++
Sbjct: 252 LVLLLLWMYYAALVFFAGALITAVIDERMHARQ 284
>gi|310829421|ref|YP_003961778.1| putative ribonuclease BN [Eubacterium limosum KIST612]
gi|308741155|gb|ADO38815.1| putative ribonuclease BN [Eubacterium limosum KIST612]
Length = 272
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/274 (18%), Positives = 111/274 (40%), Gaps = 2/274 (0%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + I E D W + + +S +++ FP I+F N G QF
Sbjct: 1 MKNKTSKLTEFIIFMAEDMDRTDFWGICAQMSFYIIMAFFPLIIFLINFVGRF-IVQFKD 59
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ D++ P++ + I + A I L +F++ A+ +N+ Y
Sbjct: 60 YLFDILKEYLPQLSYDYVRTLIDTLTKNLADN-NYILVLFTFFFATLAARAIMTGMNQNY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
E RS L+SF + +L +++++++ +V Y+ ++++
Sbjct: 119 GNHESRSHLKIWLLSFLFTILFAISIILIISAYVFSEAISEYILVRLGIDQFNIILMNIF 178
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+++ V++ P + + M LPG +F+ + + +F ++ + Y+
Sbjct: 179 TFIFSLVTSIFLFTCVYVLAPDRQLRFMQGLPGAVFSTLGINIAFRIFLMFMNHSTKYTL 238
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+Y + LV +Y + V LG ++N
Sbjct: 239 LYGNFGGLFALLVGIYFVCVILNLGGKINVFFSR 272
>gi|254516314|ref|ZP_05128373.1| ribonuclease BN [gamma proteobacterium NOR5-3]
gi|219674737|gb|EED31104.1| ribonuclease BN [gamma proteobacterium NOR5-3]
Length = 298
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/272 (18%), Positives = 105/272 (38%), Gaps = 8/272 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
++ + ++ ++++ F+ ED A+ +S + + S+ ++ +A G
Sbjct: 3 KKTLTFYWQVLTESLDRFLAEDMPTHAAALSYNMIFSLPSMLLIVLWVAAVFYGEAAVSN 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVL-AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + E A+ I + ++ P+ I+ L YF++ LR +LN
Sbjct: 63 AIFAELGSLVGESGAQQIMATLDELHIHEPSWEASAIAILVLLYFATTVYHVLRKALNHL 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+V S +++ ++A L I+SF+ V + A V K L +
Sbjct: 123 AQVKAPASLHLSIWRLLRIRIIAVALLSIVSFLMVIFLMLDALVVKVDSYLAGFSGPLAA 182
Query: 180 GR-----IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ A I +LP + G + T ++ G L + I +
Sbjct: 183 YLDMVDAYVLNLCATTILFALYIRYLPDVRLAWRDTWFGALLTAFLYLQGKALISLVIGS 242
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
S +++Y SI+ ++++Y F+ GA
Sbjct: 243 -SEAASVYDAAGSILVLMLWVYYAAAIFLFGA 273
>gi|124265235|ref|YP_001019239.1| BrkB-like serum-resistance protein [Methylibium petroleiphilum PM1]
gi|124258010|gb|ABM93004.1| BrkB-like serum-resistance protein [Methylibium petroleiphilum PM1]
Length = 294
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 12/270 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDVVFG 68
+ A + E+ A+ ++ L S+ P +V +AG + G ++ +
Sbjct: 8 RVAVRAWTLWAEQRIGRTAAALAFYTLFSLAPILVIATAVAGAVWGREAVQGDLVTQLSR 67
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRAYRVVEMRS 127
+ + + I T++A+ A + +S LR + + +R
Sbjct: 68 VVGTEGGRLLQEMIANAYRSTRGAWATLAAVGATLFGASAVFAELRAAFEQLWRRDGAPD 127
Query: 128 WYITRLIS---------FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ RL++ V+ L+ V + +
Sbjct: 128 LPLGRLLAALVSARLRGVAVVIGIGFVLLASLVVNSLLVSLGGAFTPMLAGGLLQAGWLL 187
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + + + + + +F +++ L + Y+ S
Sbjct: 188 VLPWLVSFAVTVTMVALLLRVMLPVRLPRRQLGGVAVFGALAFEAAKGLVSVYLGH-SAV 246
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+ + S+ LV+LY++ +L A L
Sbjct: 247 VSTFGAAGSVAILLVWLYVVACVVLLCAVL 276
>gi|28199523|ref|NP_779837.1| ribonuclease BN [Xylella fastidiosa Temecula1]
gi|71898168|ref|ZP_00680354.1| Ribonuclease BN [Xylella fastidiosa Ann-1]
gi|182682256|ref|YP_001830416.1| ribonuclease BN [Xylella fastidiosa M23]
gi|28057638|gb|AAO29486.1| ribonuclease BN [Xylella fastidiosa Temecula1]
gi|71732142|gb|EAO34198.1| Ribonuclease BN [Xylella fastidiosa Ann-1]
gi|182632366|gb|ACB93142.1| ribonuclease BN [Xylella fastidiosa M23]
gi|307578531|gb|ADN62500.1| ribonuclease BN [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 292
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 94/275 (34%), Gaps = 19/275 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F E D A+ +S ALLS+ ++ T+I +
Sbjct: 24 MALVNRFNEIDLLTQAASLSFYALLSLA-PLLVLLLWLTASLYPAAQATLITQIEQLAGN 82
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + A P G S L ++ L+ +LN + + R
Sbjct: 83 SAATVAKTILQNATAQPTFGTLAGLWSTLLLFIGATAVFAQLQNALNLIFHTDQRRLEGI 142
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG VL L+I A+ + ++ P +T
Sbjct: 143 KAWLKKRVFSFGVVLALGFLLIISMVATTALQVVFTHLPSMLP----------TIGYLST 192
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ + F++ +LP G T + +G YI T + S Y +
Sbjct: 193 LVLYTLAFAFLYRYLPDRTVNWRQAYIGGAITACLFTLGRYAIGLYISTAAPGSA-YGSM 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ LV++Y V F +GA L A + K
Sbjct: 252 GALVIMLVWMYYTSVVFFIGALLTAVIDERLRDHK 286
>gi|71274629|ref|ZP_00650917.1| Ribonuclease BN [Xylella fastidiosa Dixon]
gi|71899299|ref|ZP_00681460.1| Ribonuclease BN [Xylella fastidiosa Ann-1]
gi|170730894|ref|YP_001776327.1| ribonuclease BN [Xylella fastidiosa M12]
gi|71164361|gb|EAO14075.1| Ribonuclease BN [Xylella fastidiosa Dixon]
gi|71730925|gb|EAO32995.1| Ribonuclease BN [Xylella fastidiosa Ann-1]
gi|167965687|gb|ACA12697.1| ribonuclease BN [Xylella fastidiosa M12]
Length = 292
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/275 (19%), Positives = 94/275 (34%), Gaps = 19/275 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F E D A+ +S ALLS+ ++ T+I +
Sbjct: 24 MALVNRFTEIDLLTQAASLSFYALLSLA-PLLVLLLWLTASLYPAAQATLITQIEQLAGN 82
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + A P G S L ++ L+ +LN + + R
Sbjct: 83 SAATVAKTILQNATAQPTFGTLAGLWSTLLLFIGATAVFAQLQNALNLIFHTDQRRLEGI 142
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG VL L+I A+ + ++ P +T
Sbjct: 143 KAWLKKRVFSFGVVLALGFLLIISMVATTALQVVFTHLPSMLP----------TIGYLST 192
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
++ + F++ +LP G T + +G YI T + S Y +
Sbjct: 193 LVLYTLAFAFLYRYLPDRTVNWRQAYIGGAITACLFTLGRYAIGLYISTAAPGSA-YGSM 251
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ LV++Y V F +GA L A + K
Sbjct: 252 GALVIMLVWMYYTSVVFFIGALLTAVIDERLRDHK 286
>gi|182414380|ref|YP_001819446.1| ribonuclease BN [Opitutus terrae PB90-1]
gi|177841594|gb|ACB75846.1| ribonuclease BN [Opitutus terrae PB90-1]
Length = 541
Score = 90.5 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 21/205 (10%), Positives = 65/205 (31%), Gaps = 2/205 (0%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + + T+ + + + N + V R + +
Sbjct: 173 RLVQMMNNFINQGRSGSAGTVGFFGLVIIVLLLFKTVEDTFNEIWGVRSGRGVLMRIVYY 232
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAY--VRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + L +V + A + P + ++ + + + L
Sbjct: 233 WTTLTLGAVLFFASVTLLSAGAFFSVFNNALADLPFSAQMAAMLQWSLPALSFTLVALLL 292
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ +P + S G I ++ L Y+ ++Y L + +
Sbjct: 293 TIFYRVIPHTRVFWRSAFTGAIVVAALLMLNHYLAFLYVRRVILTESLYGSLGLPLVMMF 352
Query: 254 FLYMLGVFFILGAELNASMIIYYWR 278
LY+ ++ ++G +++ ++ ++R
Sbjct: 353 GLYIFWLYVLIGGQISYAVQNVHFR 377
>gi|21223222|ref|NP_629001.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289769568|ref|ZP_06528946.1| integral membrane protein [Streptomyces lividans TK24]
gi|7649576|emb|CAB89065.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
gi|289699767|gb|EFD67196.1| integral membrane protein [Streptomyces lividans TK24]
Length = 321
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 100/274 (36%), Gaps = 8/274 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ ++ ++ +++FP + A +A Q + D +
Sbjct: 32 HAWRSYERLDRVKWSRLAAAMTFTSFVALFPLLSLAAAVAAATLNKQQQDKLQDKLAEQI 91
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWY 129
P + + ++ A + ISAL + +EA R L + + E +
Sbjct: 92 PGISDQLNIQGLVD----NAGTVGVISALLLLFTGMGWIEATRGCLRAVWELPDEDENPV 147
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATML 187
+ R G ++ L+I + + ++ + + +++ +L
Sbjct: 148 LHRAKDAGVLVGLGGALLITVGISTVASALVGWIIRTIGLAQGGVGGVLLYVAAFAVAVL 207
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L++V LP + + ++ + + + + +L + YI + S MY
Sbjct: 208 ADFLLLLYVLTLLPGVQPERRRLVVAALIGAVGFELLKLLLSGYIQGVAAKS-MYGAFGV 266
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ L+++ + A A+ +P
Sbjct: 267 PVALLLWINFTAKLVLFCASWTATGSKAQELGEP 300
>gi|57242516|ref|ZP_00370454.1| ribonuclease BN, putative [Campylobacter upsaliensis RM3195]
gi|57016801|gb|EAL53584.1| ribonuclease BN, putative [Campylobacter upsaliensis RM3195]
Length = 277
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 91/268 (33%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ F ++ + +++ ++ +S ++LS+ P + ++ + + +
Sbjct: 1 MKRVFKLLLAL--------RDKEILNYSASLSFYSILSLIPILFVCFSVFTQIPSFEAHY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + + + L + L + +A A+ S +NR
Sbjct: 53 ERAKSVIFTFLIPAQQDLVASYLDTFLKNSVNLGIMGLIAMAFTSLAFFSGYDFVINRIT 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ L AS++ V + L L++ I
Sbjct: 113 QNEPK-------------GLWASISSYWTLLTLVPLGLGLSFYVSSLIQKTLDDYHIGFN 159
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L F+ + + ++ W G LF +Y+V TY++
Sbjct: 160 FFEILPFVIIWALFFISYSSSLHQVSLKNLALTSFCAGAIWYAGKNLFVYYVVYNKTYTS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ V ++ G ++
Sbjct: 220 VYGSFSTILFFFIWIYISWVIYLYGLKI 247
>gi|325125320|gb|ADY84650.1| Predicted membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 304
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/264 (17%), Positives = 108/264 (40%), Gaps = 9/264 (3%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+ + + + I+ L S+FP ++ N + + D + +P +A+ I
Sbjct: 24 SQGEIFQSSIVIAYYILFSIFPIVIIVGNALPWFHLD--TGPIADYLEMIFPSDVARYII 81
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM------RSWYITRL 133
+ +L + + A+ A + S V A+RI +NR Y V + R
Sbjct: 82 PIVDTLLKSNSTSYISFGAIMALWSMSCMVNAVRIGMNRLYGVHNKELKLGFWHFIWNRT 141
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ + L ++++ + V L ++ +F + + + R ++ + IG+
Sbjct: 142 LTVIFSALMVTMFILLALIVVFGQEVLHFLAPYFNLPLAWIDKLSSYRWLVLLVLILIGV 201
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+++ P K ++ PG I T W + LF+ Y+ F Y + + + ++
Sbjct: 202 YYLNAVAPNVHFK-KALFPGTIVTVAGWEALSYLFSFYLKKFPVKWENYGIVGNFIIFML 260
Query: 254 FLYMLGVFFILGAELNASMIIYYW 277
+L +L + + G +N S+ +
Sbjct: 261 WLNLLAILLLFGTAVNVSLDQLRY 284
>gi|330444602|ref|YP_004377588.1| ribonuclease BN family protein [Chlamydophila pecorum E58]
gi|328807712|gb|AEB41885.1| ribonuclease BN family protein [Chlamydophila pecorum E58]
Length = 430
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/261 (16%), Positives = 87/261 (33%), Gaps = 1/261 (0%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
A + + A +S LLS P +VF L+ +L ++ + + F + E I
Sbjct: 31 AFKILWRNESTKEACTLSYYGLLSCIPILVFFLRLSQYLFSNIQWQEWLVLKFPDYKEPI 90
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + S + + +L LN+ +R +
Sbjct: 91 HAIVEAA-RNSSGSNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTPVSRQRLIA 149
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+L++ + +I+ +V I + + + + I+ + L++ L
Sbjct: 150 YLIIILISPMIFIILCGAWVYITQIMPLQYPLLFKINSSITAIYLFSRLVPYVILYLTLF 209
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ FLP S L + W+V F YS Y L ++ + L+
Sbjct: 210 CLFSFLPRVFVDKPSALISSLIVGSIWIVFQKAFFCLQALLFNYSFTYGALVALPSVLLL 269
Query: 255 LYMLGVFFILGAELNASMIIY 275
LY ++ G L +
Sbjct: 270 LYSYATIYLFGGALTFVIQNR 290
>gi|326795827|ref|YP_004313647.1| ribonuclease BN [Marinomonas mediterranea MMB-1]
gi|326546591|gb|ADZ91811.1| ribonuclease BN [Marinomonas mediterranea MMB-1]
Length = 274
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/271 (16%), Positives = 92/271 (33%), Gaps = 9/271 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-HQFVPTVIDVV 66
+ +I+ ++++ F A+ ++L++LL+ P I + A T+I +
Sbjct: 10 LINIMKESVKRFNNSATSQKAAQLTLASLLAAVPIITIIFGILSLTPALSSLESTLIGFI 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + +L + AK L + + + S+ + + + R
Sbjct: 70 ESNLAPGSSNEVITYLLSF-SDQAKNLSLAGFATLLLTALLLLNSFENSVQSIWGIHDKR 128
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S L + + L + L + + A L I
Sbjct: 129 SIKDKLLTYWAILTLGPILLAASL-------SLYGTLISYQLAGIELSQFIDKLFDIGKF 181
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L+ ++ P S I L S ++ LF ++ F+ Y +Y A
Sbjct: 182 LIYTFMLLLLNYLAPNTNSSIKLSLICSAIGAFSLILLNTLFANFAQFFANYQVIYGAFA 241
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ LV+L V + LNA++ Y
Sbjct: 242 ALPIFLVWLQASWVIVLATICLNATLHEYRQ 272
>gi|315639085|ref|ZP_07894253.1| YihY family protein [Campylobacter upsaliensis JV21]
gi|315480861|gb|EFU71497.1| YihY family protein [Campylobacter upsaliensis JV21]
Length = 277
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/268 (13%), Positives = 91/268 (33%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ F ++ + +++ ++ +S ++LS+ P + ++ + + +
Sbjct: 1 MKRIFKLLLAL--------RDKEILNYSASLSFYSILSLIPILFVCFSVFTQIPSFEAHY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V + + + L + L + +A A+ S +NR
Sbjct: 53 ERAKSVIFTFLIPAQQDLVASYLDTFLKNSVNLGIMGLIAMAFTSLAFFSGYDFVINRIT 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ L AS++ V + L L++ I
Sbjct: 113 QNEPK-------------GLWASISSYWTLLTLVPLGLGLSFYVSSLIQKTLDDYHIGFN 159
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L F+ + + ++ W G LF +Y+V TY++
Sbjct: 160 FFEILPFVIIWALFFISYSSSLHQVSLKNLALTSFCAGAIWYAGKNLFVYYVVYNKTYAS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ V ++ G ++
Sbjct: 220 VYGSFSTILFFFIWIYISWVIYLYGLKI 247
>gi|114705097|ref|ZP_01438005.1| hypothetical protein FP2506_09171 [Fulvimarina pelagi HTCC2506]
gi|114539882|gb|EAU43002.1| hypothetical protein FP2506_09171 [Fulvimarina pelagi HTCC2506]
Length = 286
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/274 (16%), Positives = 96/274 (35%), Gaps = 4/274 (1%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDV 65
+ + AI + + ++ + IS AL S+ P ++ +AG F G V+D
Sbjct: 3 KIARLFKAAILGWWNDRALSLGAAISFYALFSLGPVLLASVTIAGLFFGQDATRLAVVDE 62
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFT-ISALAAAYFSSNGVEALRISLNRAYRVVE 124
A + + ++ + L+ LN +R
Sbjct: 63 AGALIGADAAGALDSMLSAATQFGTGWFSVLFGIGMFFVLATGAIVELQDDLNIIFRSEP 122
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIY 183
+ T + L +TL + + + I L + + +L ++I I
Sbjct: 123 KYGDFWTIVRGRLISLALVLTLGFLLLISLVIDAGLTALSNYILDRFEDLTVLILGLNIL 182
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ A + LP + + ++++ G T +G YI S ++ Y
Sbjct: 183 FSWAAGTTLFALIFRLLPDKRLEWLTVIVGAALTAALLEIGKFAIGLYIGQ-SGITSTYG 241
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
AS++T L++++ F+ GAE + +
Sbjct: 242 SAASLVTILLWIFYTCQIFLFGAEFTWAYSVERG 275
>gi|218667673|ref|YP_002426315.1| YihY family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519886|gb|ACK80472.1| YihY family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 262
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/265 (19%), Positives = 101/265 (38%), Gaps = 11/265 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF-VPTVIDVV 66
+F I+ A F +D A ++ + L + P V G +L +G V D+V
Sbjct: 1 MFYRIFRAWHGFWNDDCIDRAGLLAYTTLFGLIPLAVLGFSLWNLVGFSLLHRAQVDDLV 60
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
++ I ++ + A A+ + + A+ N + V
Sbjct: 61 LRSFVPQTGGAILRQVNSIAARGAQMGLFGLLGLGI-TAILLLHAVERHFNAIWGVTPTC 119
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
W +L LV I L ++ L ++ L+ T
Sbjct: 120 LWCR--------ILRYMAMLVAGPLGIALILPLLGPLQPLLVYLAHIPLLPPVLSHVLTF 171
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + + ++ LP+A ++ + G + T I + + ++ Y+ FST+ T+Y L
Sbjct: 172 LVVTVMMGLLYKILPSAPTRWQDVFLGGVSTAILFEISKMVLAGYL-QFSTFETLYGALG 230
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L++LYM + GAE+ A+
Sbjct: 231 AFPVFLLWLYMAWASVLFGAEMAAA 255
>gi|15618112|ref|NP_224397.1| hypothetical protein CPn0188 [Chlamydophila pneumoniae CWL029]
gi|33241526|ref|NP_876467.1| hypothetical protein CpB0191 [Chlamydophila pneumoniae TW-183]
gi|4376458|gb|AAD18341.1| CT132 hypothetical protein [Chlamydophila pneumoniae CWL029]
gi|33236034|gb|AAP98124.1| hypothetical protein CpB0191 [Chlamydophila pneumoniae TW-183]
Length = 430
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 96/268 (35%), Gaps = 1/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I +I+ + + A +S LL+ P +VF L+ L + + + F
Sbjct: 24 LLQAIIQSIKVLLHNEASKEACVLSYYGLLTCVPILVFFLRLSQHLFTNLNWKEWLIIKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + I + + S + + +L LN+ +R
Sbjct: 84 PDYKKPIVAIVEAAY-HATESNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTSWTPI 142
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ F L++ + +I+ ++ I + +L + + ++ + L
Sbjct: 143 SLKRLVSYFVITLVSPMIFIIVCGSWIYITQIMPIQYAKLFSLSHSMTALYFISRFVPYL 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L++ L + FLP + S L + W+V F V+ YS Y L +
Sbjct: 203 LLYLALFCCYAFLPRVAIQKTSALISTLIIGSVWIVFQKAFFSLQVSIFNYSFTYGALVA 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + L+ LY+ + ++ G L +
Sbjct: 263 LPSFLLLLYIYTMIYLFGGALTFIIQNR 290
>gi|260434985|ref|ZP_05788955.1| YihY family protein [Synechococcus sp. WH 8109]
gi|260412859|gb|EEX06155.1| YihY family protein [Synechococcus sp. WH 8109]
Length = 284
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 95/274 (34%), Gaps = 20/274 (7%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+++ + L S FP ++ ++A G + V+ V P + +
Sbjct: 1 MDLSAAFAYFVLQSFFPLLLIALSVAARVFGRTDSLDNVLASVTQVLPPSATSLVDSTLR 60
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY------------RVVEMRSWYIT 131
++ + + +SN L+ +R + ++ + T
Sbjct: 61 GLVDQGFGA-GILGVVVLLLTASNAYLTLQRGADRLWSEILPESSIGLSWWQQVVQFCRT 119
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW------NGRIYAT 185
R+ +F V SV ++ V L + + L+ + GRI
Sbjct: 120 RVEAFLTVFAISVLIIFQQLVLSVGQLPEEILGVLDGVIPGLMGFVRSSPILPLGRIIVP 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L L + + + LP+ + + ++PG + + + IV+ Y +
Sbjct: 180 ALILSLMAWLLQVVLPSRRVPSIPLIPGSLLIGFGLAFLNKILSLSIVSLGNRYQAYGVI 239
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ ++++++GV G L+ ++ K
Sbjct: 240 GSVLVLTLWVWLVGVILYFGQCLSVELVAVRLAK 273
>gi|73670039|ref|YP_306054.1| ribonuclease RN [Methanosarcina barkeri str. Fusaro]
gi|72397201|gb|AAZ71474.1| ribonuclease RN [Methanosarcina barkeri str. Fusaro]
Length = 276
Score = 89.7 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 51/277 (18%), Positives = 111/277 (40%), Gaps = 11/277 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVI 63
V +++ I+ ++E++ ++ ++ +LS+ ++F ++ FL + +I
Sbjct: 3 LGYVRNLVTRTIKEWMEDNAMTYSAALAYYFVLSLPALLLFSVSIGSIFLKSENLQSKII 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRV 122
+ + GA E I I ++ + + + I + + +SN L+ L RA+ +
Sbjct: 63 NNLQGAVDERIINMIILLFERIPEINSLSISALIGFIFLLWSASNVFRQLKNFLERAWDI 122
Query: 123 VEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + + ++SF V+L L + F+ + A ++F P +
Sbjct: 123 KPVESNNIKDFIRDAIMSFFIVILFGGLLAMSIFIEGFVYAASNLFQQFLPFSPLIADYT 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ + L L + I V+ LP + SI G T + +G + +I S
Sbjct: 183 GSI---VSFLILVLFFILVYRVLPDRSFDLKSIFVGAFVTAVLVTIGKYVIVLFIAY-SN 238
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ +Y + SI+ + Y + LGAE
Sbjct: 239 PTDVYGAIGSIIGLFLLFYYSSIMITLGAEFTKVYSE 275
>gi|254526818|ref|ZP_05138870.1| ribonuclease BN family protein [Prochlorococcus marinus str. MIT
9202]
gi|221538242|gb|EEE40695.1| ribonuclease BN family protein [Prochlorococcus marinus str. MIT
9202]
Length = 304
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 97/293 (33%), Gaps = 21/293 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
M+ + ++ A E + + D +++ + L S FP ++ ++A +
Sbjct: 1 MQRSSTWILKSLWGACERWSKSDCVDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + ++ + A+ + + N +L+
Sbjct: 61 DQQIIAIAAQLLPPSVVDLVETTLFNLIDQGFGA-GILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-----L 160
N A+RV R + + ++ + + + L
Sbjct: 120 LWEDEIPSKKANAAWRVQASRFLRNRVEAFLIVFFIGFLMVLDQISANLRMIPSNVLENL 179
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ L L ++ G+ ++ + + + LP+ K + +LPG I
Sbjct: 180 SKSNNLISDLLLKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGSFLIGIG 239
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + I++ Y + + +++++LGV G + +
Sbjct: 240 LTTLNLAVSKSILSLGARFQAYGFIGGFLVLTLWVWLLGVILYFGQCWSVVIA 292
>gi|209526823|ref|ZP_03275343.1| ribonuclease BN [Arthrospira maxima CS-328]
gi|209492694|gb|EDZ93029.1| ribonuclease BN [Arthrospira maxima CS-328]
Length = 257
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 100/256 (39%), Gaps = 11/256 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVI 63
V ++ + I + ++ +A+ ++ + S+ P ++ +AG + VI
Sbjct: 3 LATVKSLLKETITEWQKDKVPILAAALAYYMVFSLAPLLMIVIAVAGSIVGEAVAQKEVI 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + E A I + I + + I + + ++ L+ SLN + V
Sbjct: 63 EQLETLMGEQGASVIANAIQSQFQPSSSIITTIIGVVTLLFAATTIFAQLKESLNIIWHV 122
Query: 123 VEM-----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ +R++S VL+ + L++ + + ++ K L +I
Sbjct: 123 EVRPGQGIWEFIRSRILSVIMVLIVGLLLLMSLGISSFLAGMSDWLDKVVSIPSLLRSLI 182
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
NG + + + I ++ LP K + G T I +++G L + Y+ +T
Sbjct: 183 DNG---VSFILITILFGQIYRILPDVKIAWSDVAVGSGITAILFIIGRTLISFYLGR-AT 238
Query: 238 YSTMYAGLASIMTCLV 253
++ Y +S + L+
Sbjct: 239 VASAYGAASSFVVLLL 254
>gi|312864831|ref|ZP_07725062.1| YihY family protein [Streptococcus downei F0415]
gi|311099958|gb|EFQ58171.1| YihY family protein [Streptococcus downei F0415]
Length = 322
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 52/268 (19%), Positives = 107/268 (39%), Gaps = 6/268 (2%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++H+ + + ++ LL++FP IV AN+ +L +P V+ + P I
Sbjct: 17 LKHYRSAEIDLSSIAVAYYLLLTIFPLIVIAANIFPYLDID--LPDVLSFLRANLPSEIY 74
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + A P+ G+ ++ LA + S + +L+ + N+AY V + R + ++
Sbjct: 75 ANVAGIVRNLFATPSNGILGVATLAGFWTMSRSLTSLQKAFNKAYDVSQHRDVVVGHIVG 134
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
L + +++ + L+ ++ + +L ++IGL
Sbjct: 135 IVASFFILFLLTFALLLSTLSDGVYQAALQRKYDVPSGLIKLLLHLNRPIMVLVVWIGLT 194
Query: 195 FVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST--YSTMYAGLASIMTC 251
++ LP K + I +PG I + I + L Y+ + G I
Sbjct: 195 VLYFILPNVKIRKIRYTIPGTILSAIVIIFMTGLVGDYVTHTFNNLVDIKFFGSIIIFII 254
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + +L I GA LNA+ K
Sbjct: 255 MFWFVLLARILITGAVLNATTQELVTGK 282
>gi|15835723|ref|NP_300247.1| hypothetical protein CPj0188 [Chlamydophila pneumoniae J138]
gi|8978561|dbj|BAA98398.1| CT132 hypothetical protein [Chlamydophila pneumoniae J138]
Length = 430
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 96/268 (35%), Gaps = 1/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I +I+ + + A +S LL+ P +VF L+ L + + + F
Sbjct: 24 LLQAIIQSIKVLLHNEASKEACVLSYYGLLTCVPILVFFLRLSQHLFTNLNWKEWLIIKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + I + + S + + +L LN+ +R
Sbjct: 84 PDYKKPIVAIVEAAY-HATESNIGLVLVGSFYVFCWAGILMLLSLEDGLNKIFRDSWTPI 142
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ F L++ + +I+ ++ I + +L + + ++ + L
Sbjct: 143 SLKRLVSYFVITLVSPMIFIIVCGSWIYITQIMPIQYAKLFSLSHSMTALYFISRFVPYL 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L++ L + FLP + S L + W+V F V+ YS Y L +
Sbjct: 203 LLYLALFCCYAFLPRVAIQKTSALISTLIIGSVWIVFQKAFFSLQVSIFNYSFTYGALVA 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + L+ LY+ + ++ G L +
Sbjct: 263 LPSFLLLLYIYTMIYLFGGALTFIIQNR 290
>gi|317509129|ref|ZP_07966755.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
gi|316252565|gb|EFV12009.1| ribonuclease BN family protein [Segniliparus rugosus ATCC BAA-974]
Length = 328
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 87/266 (32%), Gaps = 9/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAW 70
A+E + + A+ ++ ++LS+FP I+ G + G + + + + + +
Sbjct: 1 MRAVERYQDRKADFFAAGVTYYSVLSLFPVIMVGFAILGQVLIQNPELLEHIKERITSMA 60
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+AK + I + + T+ + + ALR SL + ++
Sbjct: 61 QGGLAKQLNQLIDSAI-ASRTTVGTVGLALGLWSGLGWMAALRESLTQLWQQDPDSEANW 119
Query: 131 -----TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ L++ LA V + + + + L A V+ +
Sbjct: 120 FKTKFSDLLAMASFGLALVVVFGLITLSKSSWLVKALVKVGLGDWSGGQGFLTIVSTVLA 179
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+A ++ FV LP + + I + + L + +
Sbjct: 180 TIAAWLLFTFVIARLPRKSVALADASQAGLLGAILFQIFLELAWLLLKGVTN-GPAGKTF 238
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
I+ +VF + + A+
Sbjct: 239 GPILGLMVFFFFTVRIVLFATAWAAT 264
>gi|302382887|ref|YP_003818710.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
gi|302193515|gb|ADL01087.1| ribonuclease BN [Brevundimonas subvibrioides ATCC 15264]
Length = 308
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 48/273 (17%), Positives = 83/273 (30%), Gaps = 7/273 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ A D +S ALL+VFP I + + V +
Sbjct: 16 RLSVRAFTRSWGRDVMLYTGGVSFFALLAVFPAIAILIGFYKAVLSIAQVGEQAAALADV 75
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEMR 126
P EI ++ A+ + T SA A Y + G +AL LN + E
Sbjct: 76 MPHAARAIFRAEIERLSNASARTVSTQSAFALIVGAYAAHRGFKALLAGLNLIHDETEPH 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++ L++F L A ++S V L + L +W
Sbjct: 136 GFFKFNLLAFFVALFAFALFTVVSGAVVTSRLLDHAGPAAASSGFMPLDGLWPALGLGLG 195
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L L H + G + + +V + L Y+ + Y +
Sbjct: 196 LTLLYRYAMSHR----DPVAWGPSITGGVVATLMSMVSSWLCAIYVEQIAQLGATYGSVG 251
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+++ L++L G M I +
Sbjct: 252 AVVVLLIWLSWNVNAIFYGGAFATEMEIASRAR 284
>gi|16752852|ref|NP_445122.1| hypothetical protein CP0579 [Chlamydophila pneumoniae AR39]
gi|7189491|gb|AAF38397.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
Length = 430
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/268 (16%), Positives = 96/268 (35%), Gaps = 1/268 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ I +I+ + + A +S LL+ P +VF L+ L + + + F
Sbjct: 24 LLQAIIQSIKVLLHNEAXKEACVLSYYGLLTCVPILVFFLRLSQHLFTNLNWKEWLIIKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + I + + S + + +L LN+ +R
Sbjct: 84 PDYKKPIVAIVEAAY-HATESNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTSWTPI 142
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ F L++ + +I+ ++ I + +L + + ++ + L
Sbjct: 143 SLKRLVSYFVITLVSPMIFIIVCGSWIYITQIMPIQYAKLFSLSHSMTALYFISRFVPYL 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L++ L + FLP + S L + W+V F V+ YS Y L +
Sbjct: 203 LLYLALFCCYAFLPRVAIQKTSALISTLIIGSVWIVFQKAFFSLQVSIFNYSFTYGALVA 262
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ + L+ LY+ + ++ G L +
Sbjct: 263 LPSFLLLLYIYTMIYLFGGALTFIIQNR 290
>gi|241766670|ref|ZP_04764514.1| ribonuclease BN [Acidovorax delafieldii 2AN]
gi|241363008|gb|EER58679.1| ribonuclease BN [Acidovorax delafieldii 2AN]
Length = 344
Score = 89.3 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/271 (12%), Positives = 84/271 (30%), Gaps = 6/271 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAW 70
+ + + + DG+ M++ +S +LS+ P +V + G +L ++ +
Sbjct: 65 LRRVVWLWADADGFRMSAAMSFYGMLSLAPLLVLLVAVLGWWLDRDSLQQGIVAQIGTIV 124
Query: 71 PEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
A I + A L T+ L + ++ L+ +L R +
Sbjct: 125 GAQGAAVIRQTLRSAQAPEQGLLASTLGFLVLLFGATGVFGELQSALQRLWTHGRGEVPP 184
Query: 130 ITRLISFGYVL---LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
S L + + V + + L + + ++
Sbjct: 185 QPWWHSVSLRLRGVAYVLAFGFLLLVSLVVTTLLNLFAGWAGRWLPMAPLLRLLNEATAF 244
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + K ++ + G + + G + Y+ T + S Y
Sbjct: 245 AVCAALFVGLMRMSAGPKPRLRFLWLGAVIGASLFTAGRHVLAVYLSTAAVVSA-YGAAG 303
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
S++ L+++Y ++ A +
Sbjct: 304 SLVVLLMWIYFSAAVLLVSAACARAYEEARG 334
>gi|307725727|ref|YP_003908940.1| ribonuclease BN [Burkholderia sp. CCGE1003]
gi|307586252|gb|ADN59649.1| ribonuclease BN [Burkholderia sp. CCGE1003]
Length = 300
Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/269 (16%), Positives = 95/269 (35%), Gaps = 4/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ ++ F G +A ++ ALLS+ P ++ + + + +
Sbjct: 18 RFTLETLKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRVVPQHLLLPALGHLLQW 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMR 126
++ + E+ L + + + +FSS L +++ + R
Sbjct: 78 LVPGQSRALVQELANFL-AHRAVIGWVLFVTMLFFSSLAFTVLENAMSLIFVHRVAIRRR 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ ++ L+ + Y+L V +I++ V + A FF +L +
Sbjct: 137 HFLLSALLPYCYILFLGVGALIVTVVSSGLEAVGAEGFDFFGTYVSLQGPSRVLLYLLGL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +++ +P + I L G I + W + + Y T S S +Y L
Sbjct: 197 AGEIFVLTSIYMVMPVGRPSIRHALFGGIVAAVLWEITRHVLVWYFATLSQVSVVYGSLT 256
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L L L + GA++ A +
Sbjct: 257 MAIVILFSLEWLATLLLFGAQVIAQYERF 285
>gi|170690518|ref|ZP_02881685.1| ribonuclease BN [Burkholderia graminis C4D1M]
gi|170144953|gb|EDT13114.1| ribonuclease BN [Burkholderia graminis C4D1M]
Length = 300
Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/269 (17%), Positives = 97/269 (36%), Gaps = 4/269 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
DA++ F G +A ++ ALLS+ P ++ + + + + +
Sbjct: 18 RFTLDALKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRIVPQHVLLSALGHLLQW 77
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN---RAYRVVEMR 126
+K + E+ L + + + +FSS L +++ V+ R
Sbjct: 78 LVPGQSKALVHELANFL-AHRAVVGWVLFVTMLFFSSLAFTVLENAMSLIFVHRVVIRRR 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ ++ L+ + Y+L V +I++ V + A F +L +
Sbjct: 137 HFLLSALLPYCYILFLGVGALIVTVVSSGLEAVGAAGIDLFGTYVSLQGASRVLLYLLGL 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +++ +P + + L G I + W + + Y T S S +Y L
Sbjct: 197 AGEIFVLTSIYMVMPVGRPSLKHALFGGIVAAVLWEITRHVLVWYFATLSQVSVVYGSLT 256
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L L L + GA++ A +
Sbjct: 257 MAIVILFSLEWLATLLLFGAQVIAQYERF 285
>gi|157412450|ref|YP_001483316.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9215]
gi|157387025|gb|ABV49730.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9215]
Length = 304
Score = 89.3 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 97/293 (33%), Gaps = 21/293 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
M+ + ++ A E + + D +++ + L S FP ++ ++A +
Sbjct: 1 MQRSSTWILKSLWGACERWSKSDCVDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + ++ + A+ + + N +L+
Sbjct: 61 DQQIIAIAAQLLPPSVVDLVETTLFNLIDQGFGA-GILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-----L 160
N A+RV R + + ++ + + + L
Sbjct: 120 LWEDEIPSKKANAAWRVQASRFLRNRVEAFLIVFFIGFLMVLDQISANLRMIPSNVLENL 179
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ L L ++ G+ ++ + + + LP+ K + +LPG I
Sbjct: 180 SKSNNLISDLLLKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGSFLIGIG 239
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + I++ Y + + +++++LGV G + +
Sbjct: 240 LTTLNLAVSKSILSLGARFQAYGFIGGFLVLTLWVWLLGVILYFGQCWSVVIA 292
>gi|258650769|ref|YP_003199925.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
gi|258553994|gb|ACV76936.1| ribonuclease BN [Nakamurella multipartita DSM 44233]
Length = 298
Score = 88.9 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 87/224 (38%), Gaps = 2/224 (0%)
Query: 57 QFVPTVIDVVFGAWPEVIAK-PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ V + + + +A I + + +L + ++ + + + S+ + A S
Sbjct: 68 EIREQVNVFLHTIFNQEVADNLIGNTVDVILNSSQTDVVSVGLIISLWAGSSAMTAFVES 127
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ AY E R + R + G + A ++M + P L + +
Sbjct: 128 IAIAYGQHEFRHPVLERFFALGLYVGALAAGIVMVPLLAIGPDYLPRLFPP-DWRSAVSE 186
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
II + L + L ++ P K + M LPG ++ + Y+
Sbjct: 187 IIGWLYYPGLAIGLILLLTTLYKVAPKDKHRWMRGLPGAFLAAAVFLTASTGLRLYLSYV 246
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y LA+ +T L+F Y + + I+GA+ N +++ YY +
Sbjct: 247 YEHGLTYGALATPITFLLFYYFISMAIIIGAQFNNALLEYYPPR 290
>gi|296395158|ref|YP_003660042.1| ribonuclease BN [Segniliparus rotundus DSM 44985]
gi|296182305|gb|ADG99211.1| ribonuclease BN [Segniliparus rotundus DSM 44985]
Length = 365
Score = 88.9 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 93/272 (34%), Gaps = 8/272 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVI 63
+ A+E + + A+ ++ ++LS+FP I+ G + G + + + +
Sbjct: 37 WPPLAHLVRAVERYQDRKADFFAAGVTYYSVLSLFPLIMIGFAILGQVLIQNPEMLDHIK 96
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + +AK + ++++ + T+ + + A+R SL + ++
Sbjct: 97 DRITSTAQGGLAKQL-NQLIDAAIASRGTVGTVGLGLGLWSGLGWIAAIRESLTQLWQQE 155
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL----AYVRKFFPALGNLLLIIWN 179
E + S + LL+ +++ F + + + A R ++
Sbjct: 156 EDDKNWFATKFSDLFALLSFGLALVVVFGLITLSKSSWLSKAIGRVGLGDWSGAQSVVTI 215
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
LA ++ FV LP + + + + + L + +
Sbjct: 216 ASTVLATLAAWVLFSFVISRLPRKAVALRDAFEAGLIGAVLFEIFLELAWLLLKGVTN-G 274
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
I+ +VFL+ + A+
Sbjct: 275 PAGKTFGPILGFMVFLFFTARILLFSTAWAAT 306
>gi|78778484|ref|YP_396596.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9312]
gi|78711983|gb|ABB49160.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9312]
Length = 306
Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/293 (12%), Positives = 98/293 (33%), Gaps = 21/293 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
M+ V + A E + + D +++ + L S FP ++ ++A +
Sbjct: 1 MQRSLAWVLKSFWGACERWSKSDCIDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I V P + + + + ++ + A+ + + N +L+
Sbjct: 61 DQQIISVAAQVLPPSVVELVETTLFNLIDQGFGA-GILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-----L 160
+N A+R R + + ++ + + + L
Sbjct: 120 LWEDELPSKKVNAAWREQASRFLRNRIEAFLIVFFIGFLMVLDQISANLRMIPSNVLENL 179
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ L L ++ G+ ++ + + + LP+ K + +LPG I I
Sbjct: 180 SKSNNLISDLLLKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGSILIGIG 239
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + I++ Y + + +++++LGV G + +
Sbjct: 240 LTTLNLAVSKSILSLGARFQAYGFIGGFLVLTLWVWLLGVILYFGQCWSVVIA 292
>gi|320106965|ref|YP_004182555.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
gi|319925486|gb|ADV82561.1| ribonuclease BN [Terriglobus saanensis SP1PR4]
Length = 331
Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 92/245 (37%), Gaps = 2/245 (0%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + + + D A ++ + +LS+FPFIV L+ + + V + +
Sbjct: 60 LLALLHYLGQTDVHTYAFSVAANVILSLFPFIVLLLTLSRRVFHSAAMEGVAGEMMHYFL 119
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + Q+LA P KG+ S + S+ L ++LN + V + R++
Sbjct: 120 PTGQDFVMRNM-QLLAHPQKGVQIFSVFMLLFSSTGVFLPLEVALNNVWHVKKNRNYLQN 178
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+++S G + LAY+ ++ N +LA +
Sbjct: 179 QIVSLGLAFAVGALAMASIAFTAGQQTLLAYLFFGHTQNATYRVVSQNFMHLLAVLAGIL 238
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ LP K M++LP I + W L+ H + + +Y +
Sbjct: 239 LFFLIYWILPNRKVPAMAVLPTAIVIGLLWEACKELYIHVLPWL-DFQRVYGPFYISVGL 297
Query: 252 LVFLY 256
+++ +
Sbjct: 298 MMWAF 302
>gi|296139552|ref|YP_003646795.1| ribonuclease BN [Tsukamurella paurometabola DSM 20162]
gi|296027686|gb|ADG78456.1| ribonuclease BN [Tsukamurella paurometabola DSM 20162]
Length = 404
Score = 88.9 bits (219), Expect = 7e-16, Method: Composition-based stats.
Identities = 41/279 (14%), Positives = 99/279 (35%), Gaps = 9/279 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFVPTVIDVV 66
I + I ++ ++ + LS+ P ++ L G++ + + +
Sbjct: 43 RIFWRTIVKSWDDSIIGQSAQAAFWQTLSLPPLLLGLLGLTGYVANWFGPDTIGVIQGKI 102
Query: 67 FGAWPEVIAK-----PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
V + I + VL+ + +I + A + S+ + + S+ A+
Sbjct: 103 LSFSESVFTESVVTEIIGPMVSGVLSEGRFDIVSIGFIIALWAGSSALSSFVDSICMAHD 162
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+R+ R + + V V+ + P + + +I G
Sbjct: 163 QHTVRNPVHQRFFAVLLYVEFLVIAVLTLPLVALGPTLIVKYMP-ASWHPAVARLIDVGY 221
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + L L ++ +PG + +++ + Y+ +T
Sbjct: 222 LPFVVALLVGALALLYRQALPRPLPWYRQVPGAALAALIFLIASTGLRVYLSLIATRGYS 281
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y LA+ + L+F + LG ++GAE NA++ + ++
Sbjct: 282 YGALATPIAFLLFTFFLGFAVMVGAEFNAALQARWPARE 320
>gi|329907332|ref|ZP_08274642.1| Ribonuclease BN [Oxalobacteraceae bacterium IMCC9480]
gi|327546993|gb|EGF31887.1| Ribonuclease BN [Oxalobacteraceae bacterium IMCC9480]
Length = 288
Score = 88.9 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 52/278 (18%), Positives = 105/278 (37%), Gaps = 12/278 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTV 62
V ++ ++++ +M + ++ + S+ P ++ +LAG GA +
Sbjct: 2 RLRDVGPLLNTTFTSWLDDYAPSMGAALAYYTMFSIAPLLLIVISLAGLVFGADAVRGEI 61
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + G E A+ I + V + + ++ L+ +LNR +R
Sbjct: 62 VGQLSGMMGEAGARAIEGLLKSVSDPSDNIPATLLGLVLLLIGATTVFGELQDALNRIWR 121
Query: 122 VVEMRSWY------ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
V + TRL+SFG +L L+I + A+ + F L
Sbjct: 122 VPPRKVRSGLLEVLRTRLLSFGMILGIGFLLMISLVLSAALTALSRWWGPLFAQWETLAS 181
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + ++ +P + +L G + T + +G L YI T
Sbjct: 182 LVDLL---LGLGMSTAVFALIYKLIPRMQVGWRDVLIGAVVTAFMFTLGKYLIGLYIGT- 237
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
S S+ + S++ LV++Y F+LGAE +
Sbjct: 238 SGVSSAFGAAGSLVVVLVWVYYSAQIFLLGAEFTWAYA 275
>gi|154174119|ref|YP_001408500.1| ribonuclease BN [Campylobacter curvus 525.92]
gi|112802713|gb|EAU00057.1| ribonuclease BN [Campylobacter curvus 525.92]
Length = 274
Score = 88.6 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 42/273 (15%), Positives = 96/273 (35%), Gaps = 12/273 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVF 67
I A +++ AS +S +LS+ P ++ +L + + + + + +F
Sbjct: 13 LKIWLSAAVKIKDKELLHYASSLSFHTMLSIIPVLLISLSLFTQMPSFSVYYAKIKEFIF 72
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ I++ I L + L + A + S +NR R
Sbjct: 73 AQLLPSNQEAISNYIETFLQNSS-SLGILGLGAIIFTSIMFFADYEYVINRIMHT-SGRK 130
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ + + + LA + L + ++ L + N L
Sbjct: 131 FWNSLSAYWTLITLAPLGLGLSFYLSNLFQDMLNA---------STYTKWINFLSIFPYL 181
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ +L + ++L + W +G +F Y V TY ++Y +
Sbjct: 182 IIWAIFCVTYLISINRSLALKNVLFSSFVASLIWYLGKSIFVFYAVNNKTYLSIYGSFSV 241
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ V++Y+ + F+ G +L A + K+
Sbjct: 242 VLLFFVWIYVSWIIFLYGVKLCAYLEKVGEIKE 274
>gi|54025740|ref|YP_119982.1| hypothetical protein nfa37700 [Nocardia farcinica IFM 10152]
gi|54017248|dbj|BAD58618.1| hypothetical protein [Nocardia farcinica IFM 10152]
Length = 374
Score = 88.6 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 1/205 (0%)
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
++ I + VL + ++ + + + S+ + ++ A+ + R R+
Sbjct: 118 SELIQPTVTDVLGRGRGAVVSVGFVLSLWAGSSAMATFVDAIVEAHDQQDARHPVWQRVF 177
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + V V + + P + + L ++ + A L L +GL
Sbjct: 178 ALLLYVQFLVAAVFILPLVALGPSLIGRILPGA-WREPGLRLVDSFYYPAVGLLLIVGLT 236
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + G + + ++ + Y+ + Y LA+ + L+F
Sbjct: 237 TLYKAALHRSLPWHRLFGGALVAGVFFMAASEGLRRYLSWVTATGVSYGALATPIAFLLF 296
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
+ LG ILGAE NA++ ++ +
Sbjct: 297 TFFLGFAVILGAEFNATVQEFWPAR 321
>gi|284166459|ref|YP_003404738.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284016114|gb|ADB62065.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 258
Score = 88.6 bits (218), Expect = 9e-16, Method: Composition-based stats.
Identities = 37/252 (14%), Positives = 87/252 (34%), Gaps = 14/252 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
+ + +A+ I+ A +S P ++ +A F+G V ++ + ++
Sbjct: 12 RDRNLTFLAAGIAYYAFVSTIPLLLLAVTIASFVGGQALADRVASMLSQQLSSSGQQMVS 71
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ + + + L + + Y S +
Sbjct: 72 QALTNP--SGRAAASVVGFFGVVWSALKLFRGLDQAFDEIYADEVDVSLLGQVWDGIVVI 129
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+ ++++ ++ V A+ + + ++ L I + ++
Sbjct: 130 VGIALSVALVVAVGAALSILNLQI-----------PFANVLGSLVLIVVLAIAFLPIYYV 178
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
LP + S+LPG I I WV+ + F Y Y Y + +++ + +LY
Sbjct: 179 LPPMDVSVRSVLPGTIVAAIGWVLLQIGFRIYAANAGKY-AAYGVIGAVLLFVTWLYFGS 237
Query: 260 VFFILGAELNAS 271
+ +LGA +NA
Sbjct: 238 IVILLGAAVNAV 249
>gi|126695448|ref|YP_001090334.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9301]
gi|126542491|gb|ABO16733.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9301]
Length = 304
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 101/293 (34%), Gaps = 21/293 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
M+ + ++ A E + + D +++ + L S FP ++ ++A +
Sbjct: 1 MQRSSTWILKSLWGACERWSKSDCVDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + + +++ + A+ + + N +L+
Sbjct: 61 DQQIIAIAAQLLPPSVVELVETTLFKLIDQGFGA-GILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-----L 160
+N A+RV + + + ++ + + + L
Sbjct: 120 LWEDEIPSKKVNAAWRVQASKFLRNRVEAFLIVFFIGFLMVLDQISANLRMIPSNVLENL 179
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ L + L ++ G+ ++ + + + LP+ K + +LPG I
Sbjct: 180 SKSNNLISDLLSKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGSFLIGIG 239
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + I++ Y + + +++++LGV G + +
Sbjct: 240 LTTLNLAVSKSILSLGVRFQAYGFIGGFLVLTLWVWLLGVILYFGQCWSVVIA 292
>gi|304413602|ref|ZP_07395046.1| ribonuclease BN-like domain-containing hypothetical protein
[Candidatus Regiella insecticola LSR1]
gi|304283693|gb|EFL92087.1| ribonuclease BN-like domain-containing hypothetical protein
[Candidatus Regiella insecticola LSR1]
Length = 314
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 95/272 (34%), Gaps = 12/272 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A++ F + G + I+ ++LS+ P ++ + GF + +I+ +
Sbjct: 24 HIIRAVDRFNDRLGSQFGAAITYFSVLSLIPMLMLSFAVTGFFLASNPFLLTELIEKIVN 83
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYRVVEMR- 126
+ + I+ + A Y + + + LR ++ R V R
Sbjct: 84 SVSDPTLATTLKNIVNTAVKQRTTVGLTGLSIALYSGISWIGSLLREAIRAQSRDVWERS 143
Query: 127 -----SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWN 179
+Y + F ++ + L+I + A + + L ++
Sbjct: 144 SDDKEKFYFRYIKDFISLIGLLIALIITLSLTSIAGSAQVMIINTLGLNGIEWLRPLMTL 203
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ A + I++ LP + ++L G + + + + + T + ++ S
Sbjct: 204 VTLAISITANCLLFIWILWILPRHHPQKKALLRGTLIAALGFEIIKFVMTMMLPYLTS-S 262
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ + F Y + + A+
Sbjct: 263 PSGAVFGPILGLMAFFYFFARLTLFCSAWIAT 294
>gi|284044882|ref|YP_003395222.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283949103|gb|ADB51847.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 320
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 88/268 (32%), Gaps = 18/268 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
++ F ++ +A+ I+ S+FP ++ + G++ G ++ ++D G +P
Sbjct: 26 VVKKFSDDQAGHLAALIAYYGFFSIFPLLLVLVTVLGYVLAGNQEWYDRIVDSTLGQFP- 84
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
I ++I I +L A + A + ++++ + +
Sbjct: 85 ----VIGEDIQIGALRGDTAALVIGSLGALWAGLGVTLAAQRAMDQVWDIPHRERRDFFM 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
G ++L + + V G + + T+L
Sbjct: 141 ARLRGLLVLGVLGAL----------NIAITVGVGLLVGGLDSVGVKASGFALTLLLDVGL 190
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTC 251
L + + G+ + W L Y+ + S Y A ++
Sbjct: 191 FWASFRLLTHKEIPTRDLWMGIFLAAVGWAALQTLGAIYVNKVVARASATYGFFAIVIGL 250
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L +LY+ G + AE N + W +
Sbjct: 251 LSWLYLGGQILLYAAEANVVRVRRLWPR 278
>gi|118471083|ref|YP_887086.1| hypothetical protein MSMEG_2755 [Mycobacterium smegmatis str. MC2
155]
gi|118172370|gb|ABK73266.1| conserved hypothetical protein [Mycobacterium smegmatis str. MC2
155]
Length = 330
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/275 (16%), Positives = 103/275 (37%), Gaps = 13/275 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLGAHQFVP 60
+ I + ++ ++ ++ + LS+ P + + A L G
Sbjct: 15 IRHIAKRTLSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYIAPLFGPETLPTIQN 74
Query: 61 TVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + P V+ + I I ++ + +I + + + S+ V A S+ A
Sbjct: 75 QLITAANSFFSPNVVNEIIEPTIRDIVKGARGEVVSIGFVISLWAGSSAVSAFVDSIVEA 134
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + G ++ V + + + P + + P + +
Sbjct: 135 HDQTPLRHPVRQRFYALGLYVVMLVGAIAAAPLVALGP---RKIAEQLPDSWD--NALHY 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A A+ + + ++ +L G + + ++V V Y+ ++
Sbjct: 190 GYYPALFFAVALFVTVLYRVSLPEPLPTHRLLLGTVLATVVFLVTTVGLRVYLTWITSTG 249
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y LA+ + L+F + LG ++GAELNA++
Sbjct: 250 YTYGALATPIAFLLFAFFLGFAIMIGAELNAAIQE 284
>gi|254417765|ref|ZP_05031489.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
gi|196183942|gb|EDX78918.1| Ribonuclease BN-like family [Brevundimonas sp. BAL3]
Length = 321
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/266 (18%), Positives = 89/266 (33%), Gaps = 8/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A D +S ALL+VFP I + V + P
Sbjct: 26 RAFTRSWGRDVMLYTGGVSFFALLAVFPAIAILIGFYKLGLSINEVSAQAAALSDLLPRA 85
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEMRSWYI 130
DEI ++ A+ + T SA A Y + G +AL LN + E ++
Sbjct: 86 AQTIFRDEIARLSNASARTISTQSAFALFVGAYAAHRGFKALLAGLNLIHDETEPHGFFK 145
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L++F + A ++S V + LL + + L L
Sbjct: 146 FNLLAFFVAVFAFALFTVVSGAVVTARILAHTASPMTDQFDGGLLPLDA---FLPALGLA 202
Query: 191 IGLIFVHLFLPAAK--SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+GL ++ + + + + + G + + V+ + L Y+ + Y + ++
Sbjct: 203 VGLTLLYRYAMSHRSPVAWLPAITGGLVATLMSVISSWLCAIYVEQIAPLGATYGSVGAV 262
Query: 249 MTCLVFLYMLGVFFILGAELNASMII 274
+ L++L G M I
Sbjct: 263 VVLLIWLSWNVNAIFYGGAFATEMEI 288
>gi|119513701|ref|ZP_01632699.1| hypothetical protein N9414_21923 [Nodularia spumigena CCY9414]
gi|119461650|gb|EAW42689.1| hypothetical protein N9414_21923 [Nodularia spumigena CCY9414]
Length = 186
Score = 88.6 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 102 AYFSSNGVEALRISLNRAYRVV--EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
+ +S + + ++ +++ + R ++ +L+S G + + V SF+ L
Sbjct: 1 IWTASGAISTAMAAFDQIHQIPSEKQRPFWKAKLVSLGLTIATILLFVFASFLVFISDLL 60
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L V +L LL + R + + V+ + P+ + ++PG I +
Sbjct: 61 LGMVVNETSSLIFLLHLWQLLRWPLALGIIATAFSLVYRYGPSVWNSGTPMMPGAISASV 120
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
SW + + LF Y+ F Y+ +Y + +++ +++L+M ++G +LN S+
Sbjct: 121 SWAILSALFRTYVANFGNYNKVYGAVGAVIVLMLWLWMSAAVMLIGDQLNVSVGE 175
>gi|269795867|ref|YP_003315322.1| hypothetical protein Sked_25840 [Sanguibacter keddieii DSM 10542]
gi|269098052|gb|ACZ22488.1| predicted membrane protein [Sanguibacter keddieii DSM 10542]
Length = 375
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 106/284 (37%), Gaps = 10/284 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ A+ + + +G + I+ SA+ SVF + G + + + +VI
Sbjct: 31 WWKTTRLARALTRYGQVNGALLCGGIAYSAIFSVFAGLTIGFTVFMRFLGNNDELLDSVI 90
Query: 64 DVVFGAWPEVIAKP-------ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
D V A P ++ + D V + +S + + + + A+++++
Sbjct: 91 DSVNTALPGMLQTVSGDSTTGLIDPQELVTSTSLSVASIVSVVVLLVSAISCMGAVQVAV 150
Query: 117 NRAYRVVEMRSWYIT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ + + ++ G ++ + ++ + + + + +++ G
Sbjct: 151 RAMFGLPPGVGNPVLVKVRQLGGFVVIGLAVLASAVIGIVVGSVSSWLLDLLGLEGTGRY 210
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ + L + + L A +L G + + + V L T + +
Sbjct: 211 LLPVLGLLVAFLVDVGTFVLIVRLLSAVHPARRDLLLGAVVAAVGFGVIRFLGTSVVASS 270
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + + A+I+T L+++ + + A ++A + + K
Sbjct: 271 ASTNPVLTSFAAIITLLIWINLSARILLTAAAISADLPLELLEK 314
>gi|284163552|ref|YP_003401831.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284013207|gb|ADB59158.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 391
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/265 (15%), Positives = 93/265 (35%), Gaps = 14/265 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + E MA I+ +A LS+ P ++ + +G ++ + A
Sbjct: 11 VLRAIVHELKVERVTFMAGSIAYNAFLSLLPLLLLLLTIISSVGDEGLERGLLSITRAAL 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
A + +E+ A + A +L ++ + Y ++
Sbjct: 71 TPGAADVLVEELQTSTAGASLLGLAALLWGA----LRIFRSLDMAFSDIYESQAENTFLD 126
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
++ + + ++ + A L LLL++ G M
Sbjct: 127 QLRDGLVVLVSVAAVVAVVIVLESLGGGLEAVGGTAGWLLHRLLLVVATGVALVPM---- 182
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+LF K ++ +LPGV T + V F Y+ + + L+ ++
Sbjct: 183 -----YYLFPDEPKITVVEVLPGVGVTAVGLVTAESAFRLYVEY-GSTNAENGLLSGVIV 236
Query: 251 CLVFLYMLGVFFILGAELNASMIIY 275
+ +LY+ G+ ++GA +NA +
Sbjct: 237 LMTWLYVSGLVILVGAAVNAVLSNR 261
>gi|123965342|ref|YP_001010423.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9515]
gi|123199708|gb|ABM71316.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. MIT 9515]
Length = 314
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 100/293 (34%), Gaps = 21/293 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
M+ + ++ A E + + D +++ + L S FP ++ ++A +
Sbjct: 12 MQRSSTWIIKSLWGACERWSKSDCIDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + + +++ + A+ + + N +L+
Sbjct: 72 DQEIISIAAQILPPSVVELVETTLFKLIDQGFGA-GILGAMFLLFTAGNAYLSLQRGSDR 130
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-----L 160
+N A++ R + + ++ + + L
Sbjct: 131 LWEDELPSRRVNSAWQEQASRFLRNRIEAFLIVFFVGFLMVLDQISANLRMIPTTVLENL 190
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ F L L ++ G+ ++ + + + LP+ K + ++PG I I
Sbjct: 191 SKSSNIFSDLFMKLPLLQVGKFAFPLIGFSLMALLLQALLPSRKVPLKPLIPGSILIGIG 250
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + I++ Y + + +++++LGV G + +
Sbjct: 251 LTTLNLAVSKSILSLGVRFQAYGFIGGFLVLTLWVWLLGVILYFGQCWSVVIA 303
>gi|118594377|ref|ZP_01551724.1| hypothetical protein MB2181_01875 [Methylophilales bacterium
HTCC2181]
gi|118440155|gb|EAV46782.1| hypothetical protein MB2181_01875 [Methylophilales bacterium
HTCC2181]
Length = 407
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/267 (16%), Positives = 96/267 (35%), Gaps = 7/267 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVF 67
+ I + + F + A + IS L + P ++ L+ +L + + +
Sbjct: 16 YFIFQEILSSFKRHNFLATNASISFFTLFAFIPLVLLILFFLSQWLSSSALALEKMQHIT 75
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
++ I E+ +V + A + S+ ALR S N + +
Sbjct: 76 ALLLPEMSNRIMAEVGKVSSTKASW-GALWITILFLGSTPLTSALRSSFNNIFSAARKHT 134
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ ++ V V L I + + + + A + + P + + +
Sbjct: 135 YLKNKVRDLLAVTAIMVLLFIYTSINIYLVQASNFFTDYVPLIEK-----NFLTSLLSFI 189
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L I + F K+ I G + T I W + F+++ Y + G+ +
Sbjct: 190 LLVIVVSFFFKIFIPVKTYSQYIFYGALVTSICWFGLSNTFSYFTSISEYYGVFFGGMRN 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
+ L++LY+ ++GAE+ A+
Sbjct: 250 LFISLIWLYLNTAALLIGAEVIAAFHK 276
>gi|326381943|ref|ZP_08203636.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395]
gi|326199369|gb|EGD56550.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395]
Length = 353
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 99/271 (36%), Gaps = 7/271 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVI 63
+ + ++ + G A A+ IS +LS+ P ++ +A F+ + +
Sbjct: 22 WGLLAHVIATLDRYNHRRGNAYAAAISFIGILSLVPVMMVSFAIAAFVLVWNPTLLTDIT 81
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
D + P + + + I +A + I ++AA + +R L +
Sbjct: 82 DAIVEHVPGALGEQLNSVIDSAIASRRT-VGVIGLISAALAGIGWMTLMRNGLTEMWGGR 140
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-- 181
R+ + ++ G + + + + + L F + + + + +
Sbjct: 141 VKRNAVLAKVYDLGTFAVLGLLFLTTIAMNIVSTGPLGRQILEFVGIPDSGVTSFLLKAS 200
Query: 182 -IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + A ++ I V ++P + +I+ + T + + + + + Y+ + S
Sbjct: 201 SVIIAVSATWVLFIVVLAWMPRCAVSVRAIVWPALGTAVIFEILKSVSSLYLQSVLG-SP 259
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
I+ +VF Y+ + A +A+
Sbjct: 260 AGTAFGPIIGVMVFAYLASRIVLYAAAWSAA 290
>gi|325844530|ref|ZP_08168226.1| YihY family protein [Turicibacter sp. HGF1]
gi|325489063|gb|EGC91448.1| YihY family protein [Turicibacter sp. HGF1]
Length = 309
Score = 88.2 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 119/273 (43%), Gaps = 7/273 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E + + + I+ + ++++ P +V L +L +++ +
Sbjct: 7 LEFLKKLSEQLKKREIKGLPEQIAFNLVMAIVPLLVVIVQLGTYL---SLNTDLVEYLIM 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A+ K + + + P+ + + ++ + S G + + N Y+V M+
Sbjct: 64 AYAPNELKLLLMNLFSTTSTPSGNIFFLITTGISFMWLISKGFYGIAAAANTTYQVPYMK 123
Query: 127 SWYITRLISFGYVL--LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
Y+ R+ SF V+ + S+ LV + +F + L + +LLLI +
Sbjct: 124 FAYLERIFSFLIVIFMILSLALVTVFALFGQGLIILIFKLLNIHIQSHLLLIFNIIKSLI 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L F + + P+ K ++ I+PG + T I W V ++ FT Y + Y+ Y
Sbjct: 184 SFLGYFSFFLSLFYLAPSIKMRVGEIIPGALVTSIGWSVSSIGFTFYANHIANYNKFYGS 243
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L+ I+ L +L++LG ++G ++N + Y+
Sbjct: 244 LSVIIMLLFWLFILGYTIMIGLQVNYILKRDYF 276
>gi|293374361|ref|ZP_06620688.1| YihY family protein [Turicibacter sanguinis PC909]
gi|292647024|gb|EFF65007.1| YihY family protein [Turicibacter sanguinis PC909]
Length = 309
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/273 (19%), Positives = 119/273 (43%), Gaps = 7/273 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ + E + + + I+ + ++++ P +V L +L +++ +
Sbjct: 7 LEFLKKLSEQLKKREIKGLPEQIAFNLVMAIVPLLVVIVQLGTYL---SLNTDLVEYLIM 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A+ K + + + P+ + + ++ + S G + + N Y+V M+
Sbjct: 64 AYAPNELKLLLMNLFSTTSTPSGNIFFLITTGISFMWLISKGFYGIAAAANTTYQVPYMK 123
Query: 127 SWYITRLISFGYVL--LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
Y+ R+ SF V+ + S+ LV + +F + L + +LLLI +
Sbjct: 124 FAYLERIFSFLIVIFMILSLALVTVFALFGQGLIILIFKILNIHIQSHLLLIFNIIKSLI 183
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ L F + + P+ K ++ I+PG + T I W V ++ FT Y + Y+ Y
Sbjct: 184 SFLGYFSFFLSLFYLAPSIKMRVGEIIPGALVTSIGWSVSSIGFTFYANHIANYNKFYGS 243
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
L+ I+ L +L++LG ++G ++N + Y+
Sbjct: 244 LSVIIMLLFWLFILGYTIMIGLQVNYILKRDYF 276
>gi|256785675|ref|ZP_05524106.1| integral membrane protein [Streptomyces lividans TK24]
Length = 310
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/274 (14%), Positives = 100/274 (36%), Gaps = 8/274 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ ++ ++ +++FP + A +A Q + D +
Sbjct: 21 HAWRSYERLDRVKWSRLAAAMTFTSFVALFPLLSLAAAVAAATLNKQQQDKLQDKLAEQI 80
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWY 129
P + + ++ A + ISAL + +EA R L + + E +
Sbjct: 81 PGISDQLNIQGLVD----NAGTVGVISALLLLFTGMGWIEATRGCLRAVWELPDEDENPV 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATML 187
+ R G ++ L+I + + ++ + + +++ +L
Sbjct: 137 LHRAKDAGVLVGLGGALLITVGISTVASALVGWIIRTIGLAQGGVGGVLLYVAAFAVAVL 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
A F+ L++V LP + + ++ + + + + +L + YI + S MY
Sbjct: 197 ADFLLLLYVLTLLPGVQPERRRLVVAALIGAVGFELLKLLLSGYIQGVAAKS-MYGAFGV 255
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ L+++ + A A+ +P
Sbjct: 256 PVALLLWINFTAKLVLFCASWTATGSKAQELGEP 289
>gi|255027017|ref|ZP_05299003.1| transport protein [Listeria monocytogenes FSL J2-003]
Length = 141
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 67/135 (49%)
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
+ + V ++ + L N R T++ +F+ F++ P +S
Sbjct: 2 VGATLLLLVFGQQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLYWVAPNRRS 61
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++S+LPG +F+ I W V ++ F +Y+ F YS Y + I+ +++ Y+ G+ ++G
Sbjct: 62 TLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYLTGIILMIG 121
Query: 266 AELNASMIIYYWRKK 280
ELNA++ I +K+
Sbjct: 122 GELNATLAIRKKKKE 136
>gi|15609844|ref|NP_217223.1| hypothetical protein Rv2707 [Mycobacterium tuberculosis H37Rv]
gi|15842245|ref|NP_337282.1| hypothetical protein MT2780 [Mycobacterium tuberculosis CDC1551]
gi|31793879|ref|NP_856372.1| hypothetical protein Mb2726 [Mycobacterium bovis AF2122/97]
gi|121638582|ref|YP_978806.1| putative transmembrane alanine and leucine rich protein
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148662548|ref|YP_001284071.1| putative alanine and leucine rich transmembrane protein
[Mycobacterium tuberculosis H37Ra]
gi|148823896|ref|YP_001288650.1| hypothetical protein TBFG_12721 [Mycobacterium tuberculosis F11]
gi|167970070|ref|ZP_02552347.1| conserved alanine and leucine rich transmembrane protein
[Mycobacterium tuberculosis H37Ra]
gi|215404672|ref|ZP_03416853.1| hypothetical protein Mtub0_13498 [Mycobacterium tuberculosis
02_1987]
gi|215412513|ref|ZP_03421247.1| hypothetical protein Mtub9_14225 [Mycobacterium tuberculosis
94_M4241A]
gi|215428135|ref|ZP_03426054.1| hypothetical protein MtubT9_17773 [Mycobacterium tuberculosis T92]
gi|215431646|ref|ZP_03429565.1| hypothetical protein MtubE_13438 [Mycobacterium tuberculosis
EAS054]
gi|215446960|ref|ZP_03433712.1| hypothetical protein MtubT_13872 [Mycobacterium tuberculosis T85]
gi|218754443|ref|ZP_03533239.1| hypothetical protein MtubG1_13884 [Mycobacterium tuberculosis GM
1503]
gi|219558716|ref|ZP_03537792.1| hypothetical protein MtubT1_15977 [Mycobacterium tuberculosis T17]
gi|224991074|ref|YP_002645763.1| putative transmembrane alanine and leucine rich protein
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253798211|ref|YP_003031212.1| hypothetical protein TBMG_01267 [Mycobacterium tuberculosis KZN
1435]
gi|254232812|ref|ZP_04926139.1| hypothetical protein TBCG_02645 [Mycobacterium tuberculosis C]
gi|254365365|ref|ZP_04981410.1| conserved transmembrane alanine and leucine rich protein
[Mycobacterium tuberculosis str. Haarlem]
gi|254551763|ref|ZP_05142210.1| hypothetical protein Mtube_15112 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260187724|ref|ZP_05765198.1| hypothetical protein MtubCP_17074 [Mycobacterium tuberculosis
CPHL_A]
gi|260206016|ref|ZP_05773507.1| hypothetical protein MtubK8_17140 [Mycobacterium tuberculosis K85]
gi|289448362|ref|ZP_06438106.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis CPHL_A]
gi|289553508|ref|ZP_06442718.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis KZN 605]
gi|289570883|ref|ZP_06451110.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis T17]
gi|289575405|ref|ZP_06455632.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289746509|ref|ZP_06505887.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289751360|ref|ZP_06510738.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis T92]
gi|289754809|ref|ZP_06514187.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289758835|ref|ZP_06518213.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289762878|ref|ZP_06522256.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294994202|ref|ZP_06799893.1| hypothetical protein Mtub2_06728 [Mycobacterium tuberculosis 210]
gi|297635315|ref|ZP_06953095.1| hypothetical protein MtubK4_14385 [Mycobacterium tuberculosis KZN
4207]
gi|297732311|ref|ZP_06961429.1| hypothetical protein MtubKR_14534 [Mycobacterium tuberculosis KZN
R506]
gi|298526177|ref|ZP_07013586.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306776986|ref|ZP_07415323.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu001]
gi|306780889|ref|ZP_07419226.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu002]
gi|306785514|ref|ZP_07423836.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu003]
gi|306790110|ref|ZP_07428432.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu004]
gi|306794194|ref|ZP_07432496.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu005]
gi|306798612|ref|ZP_07436914.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu006]
gi|306804471|ref|ZP_07441139.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu008]
gi|306807492|ref|ZP_07444160.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu007]
gi|306968766|ref|ZP_07481427.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu009]
gi|306973101|ref|ZP_07485762.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu010]
gi|307080810|ref|ZP_07489980.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu011]
gi|307085402|ref|ZP_07494515.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu012]
gi|313659644|ref|ZP_07816524.1| hypothetical protein MtubKV_14539 [Mycobacterium tuberculosis KZN
V2475]
gi|2181998|emb|CAB09467.1| PROBABLE CONSERVED TRANSMEMBRANE ALANINE AND LEUCINE RICH PROTEIN
[Mycobacterium tuberculosis H37Rv]
gi|13882536|gb|AAK47096.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31619473|emb|CAD94911.1| PROBABLE CONSERVED TRANSMEMBRANE ALANINE AND LEUCINE RICH PROTEIN
[Mycobacterium bovis AF2122/97]
gi|121494230|emb|CAL72708.1| Probable conserved transmembrane alanine and leucine rich protein
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124601871|gb|EAY60881.1| hypothetical protein TBCG_02645 [Mycobacterium tuberculosis C]
gi|134150878|gb|EBA42923.1| conserved transmembrane alanine and leucine rich protein
[Mycobacterium tuberculosis str. Haarlem]
gi|148506700|gb|ABQ74509.1| putative conserved alanine and leucine rich transmembrane protein
[Mycobacterium tuberculosis H37Ra]
gi|148722423|gb|ABR07048.1| conserved alanine and leucine rich transmembrane protein
[Mycobacterium tuberculosis F11]
gi|224774189|dbj|BAH26995.1| putative transmembrane alanine and leucine rich protein
[Mycobacterium bovis BCG str. Tokyo 172]
gi|253319714|gb|ACT24317.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis KZN 1435]
gi|289421320|gb|EFD18521.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis CPHL_A]
gi|289438140|gb|EFD20633.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis KZN 605]
gi|289539836|gb|EFD44414.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289544637|gb|EFD48285.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis T17]
gi|289687037|gb|EFD54525.1| conserved hypothetical protein [Mycobacterium tuberculosis 02_1987]
gi|289691947|gb|EFD59376.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis T92]
gi|289695396|gb|EFD62825.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289710384|gb|EFD74400.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|289714399|gb|EFD78411.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|298495971|gb|EFI31265.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308214643|gb|EFO74042.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu001]
gi|308326290|gb|EFP15141.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu002]
gi|308329818|gb|EFP18669.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu003]
gi|308333461|gb|EFP22312.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu004]
gi|308337456|gb|EFP26307.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu005]
gi|308341129|gb|EFP29980.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu006]
gi|308346086|gb|EFP34937.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu007]
gi|308348955|gb|EFP37806.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu008]
gi|308353653|gb|EFP42504.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu009]
gi|308357500|gb|EFP46351.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu010]
gi|308361454|gb|EFP50305.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu011]
gi|308365048|gb|EFP53899.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis SUMu012]
gi|323718701|gb|EGB27863.1| alanine and leucine rich membrane protein [Mycobacterium
tuberculosis CDC1551A]
gi|326904323|gb|EGE51256.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis W-148]
gi|328457984|gb|AEB03407.1| conserved alanine and leucine rich membrane protein [Mycobacterium
tuberculosis KZN 4207]
Length = 324
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 108/281 (38%), Gaps = 13/281 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQ 57
+ + ++ I + ++ ++ ++ + + LS+ P ++ A +A G
Sbjct: 7 KPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDT 66
Query: 58 FVPTVIDVVFGAW----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
+ A P V+ + I I + + ++ L + + S+ + A
Sbjct: 67 LPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFV 126
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
++ A+ +R R + ++ V LV + V V P ++ +L
Sbjct: 127 DAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMVVGPRKVSE-----HIPESL 181
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ G A +L L +G+I ++ ++ G + +++ + Y+
Sbjct: 182 ANLLRYGYYPALILGLTVGVILLYRVALPVPLPTHRLVLGAVLAIAVFLIATLGLRVYLA 241
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ Y LA+ + L+F + G +LGAELNA++
Sbjct: 242 WITRTGYTYGALATPIAFLLFAFFGGFAIMLGAELNAAVQE 282
>gi|94971210|ref|YP_593258.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
gi|94553260|gb|ABF43184.1| ribonuclease BN, putative [Candidatus Koribacter versatilis
Ellin345]
Length = 269
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/260 (18%), Positives = 97/260 (37%), Gaps = 6/260 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTVIDVVFGAWP 71
+D I + E + A ++ +A+LS FPF+V + + Q VI ++ P
Sbjct: 8 WDTIRYMTETEVHTYAFSVAANAILSFFPFVVLMLTICRRAFHSQQMYEVVISLLRDYLP 67
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I + + LA S S+ L ++LN+ + + + RS+
Sbjct: 68 SNQDFVIKNM--RFLASAHGKAQVFSLAMLLVTSTGIFLPLEVALNKVWGIHKNRSYLAN 125
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+L+S G L + + L V + + I +LA +
Sbjct: 126 QLLSLGLALACGTLAMGSVALTAGNLKMLGVVVGYQNFVARGTSFI--VMKSIAILATML 183
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ LP K +++P I ++ + + +Y A +T
Sbjct: 184 IFFLIYWILPNGKVPWRAVMPAAIIAGAFTEAAKYIYILLLPWL-DFQAVYGPFAISVTL 242
Query: 252 LVFLYMLGVFFILGAELNAS 271
+++ Y+ G+ + GA L+AS
Sbjct: 243 MIWAYVSGMLLLGGAHLSAS 262
>gi|296125224|ref|YP_003632476.1| ribonuclease BN [Brachyspira murdochii DSM 12563]
gi|296017040|gb|ADG70277.1| ribonuclease BN [Brachyspira murdochii DSM 12563]
Length = 583
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/232 (14%), Positives = 79/232 (34%), Gaps = 12/232 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++++ + +I AI F ++D A+ ++ LS P ++ G + +Q +
Sbjct: 33 IQKFLVNTYRVITFAITDFFKDDCTIRAAALTYLVTLSFIPALIVGLFILRIFNIYQNIF 92
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
VI + + I ++ ++ + +++ SL + +
Sbjct: 93 LVIFDWMEKNAPFYEPMVRQILNIADNTNLASFGIIGIISTIVSTALILHSIQKSLIKIW 152
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV S + L + + I + + L + LI
Sbjct: 153 RVKITTSIPRVVANYIALLFLIPILIGISFTLITYTSINLHNLP---------ALIKILL 203
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+++ I ++F ++ +P K + I I+ + LF+ Y
Sbjct: 204 SWVTPIISTSILILFSYVLVPQTKVNWSNAAISSILVAIAII---TLFSVYF 252
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A I L+ LY++ + + GAEL S+ +
Sbjct: 409 SFAQIPVLLLLLYIVWIIILFGAELTYSIQYFR 441
>gi|197105078|ref|YP_002130455.1| ribonuclease BN [Phenylobacterium zucineum HLK1]
gi|196478498|gb|ACG78026.1| ribonuclease BN [Phenylobacterium zucineum HLK1]
Length = 304
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 78/270 (28%), Gaps = 6/270 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
A+ D +S +L++FP + + V P+
Sbjct: 28 RALTRLWGRDVMLYTGGVSFFVMLAIFPALAILMGAYSLFFDPAQAARQAEHVARIMPDA 87
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRVVEMRSWYI 130
E+L++ V + + S +A Y + G +AL L+ + + R +
Sbjct: 88 ARLIFQKEMLRLSQVSHEAISLQSGVALVIGGYAAHRGFKALLAGLSFIHDEDKPRGFVG 147
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L++ ++ L +S VF + L W +
Sbjct: 148 FNLLALWVLIAVFAGLGALSAVFFVFRILGETFDLRPLRGALWLYSEWTWASAGMTAGMT 207
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ P + G + + Y+ + Y +A+++
Sbjct: 208 FIYRWAMSSDP---VDWRASTLGGAAAAGLCIFASWALGFYVEQIAQLGATYGSVATVVI 264
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L++L G L + + ++
Sbjct: 265 FLIWLSWNVNAVFFGGALATEVELALHTRR 294
>gi|226366211|ref|YP_002783994.1| hypothetical protein ROP_68020 [Rhodococcus opacus B4]
gi|226244701|dbj|BAH55049.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 390
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 96/283 (33%), Gaps = 9/283 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF---LGAHQFVPT 61
+I ++ + A+ + LS+ P ++ + G+ V
Sbjct: 23 LRRALSVIGRTASKAWDDSIFGKAATAAFWQTLSLPPLLLGLLGMLGYVGGWFGPDTVDI 82
Query: 62 VIDVVFGAWPEVIAK-----PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ + V + I + VL + ++S L + + S+ + S+
Sbjct: 83 IQSKIVNFSGTVFSDSVVEQIIRPTVGDVLERGRPEIVSLSFLLSLWAGSSAISTFVDSI 142
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
A+ E R R+ + ++ + V + P + V I
Sbjct: 143 VEAHGQQEARHPVWQRVFALLLYVMFLILAVFTLPLVALGPTLVGRVLPE-SWRTIGTEI 201
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ L L +GL ++ +L G + + ++ + Y+ +
Sbjct: 202 VDTFYYPGVGLLLIVGLTTLYKVALPRSLPWHRLLGGALVAGVFFLGASTCLRRYLSWVA 261
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+F + LG +LGAE NA++ ++ +
Sbjct: 262 GTGYTYGALATPIAFLLFTFFLGFAVVLGAEFNATVQEFWPAR 304
>gi|91204478|emb|CAJ70978.1| unknown protein [Candidatus Kuenenia stuttgartiensis]
Length = 588
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/223 (13%), Positives = 85/223 (38%), Gaps = 2/223 (0%)
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ + + + + + V + L I +F N + + S
Sbjct: 219 ERIESSVLSIPSNISLNAFLYKKQIMHFVDRTSFRYLGAIGLTFLLFFVINTIGNIEASF 278
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
N +++ + RS + + + + ++ + + + + +G +
Sbjct: 279 NDIWKIKKSRSVFRKFTDYTSIMFVFPILILTSTTITAVLTN--EKLVTLLNKIGFGKIY 336
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ ++ ++AL++ I V++FLP + +++ + G I + + V + + +
Sbjct: 337 LSTLGLFLPIVALWMAFISVYIFLPNTRVRVIPGIIGGIIGGTLFYILQVFYFKSQIGLA 396
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y+ +Y A++ L++L M + GA ++ + + K
Sbjct: 397 RYNLIYGAFAAVPFFLLWLQMSWNVVLFGAVISYVIQNIRFIK 439
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 27/69 (39%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
V + F E AS ++ +++S+ P + F +++ LGA + + I+
Sbjct: 35 LRRVVKFCALVVSEFTEGRCLLKASALTFISIVSLIPLMAFVLSVSKGLGAEKVLDQKIN 94
Query: 65 VVFGAWPEV 73
P
Sbjct: 95 TNIFNLPGG 103
>gi|302558858|ref|ZP_07311200.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
gi|302476476|gb|EFL39569.1| integral membrane protein [Streptomyces griseoflavus Tu4000]
Length = 305
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/269 (11%), Positives = 92/269 (34%), Gaps = 8/269 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + E +A+ ++ + +++FP + A + + T+
Sbjct: 16 RLMLTHAWRSYERLDRVHWTRLAAAMTFRSFVALFPLLTVAAAVGAATLSQDQQNTLQRK 75
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-E 124
+ P + + ++++ A + I+ + + A+R L + + E
Sbjct: 76 IADQVPGISDQLNIGDLVE----NAGTIGLIAGAVLLFTGISWAGAMRECLRAVWELPDE 131
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRI 182
+ ++ + G ++ ++I + + ++
Sbjct: 132 EENPFLRKGKDAGILVGLGGAVLITLAASTVASAMVGRISDAIGLEKGGWGGIVLHVAAF 191
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ A F+ L++V LP + ++ + I + + +L + Y+ + S MY
Sbjct: 192 AVAVGADFLLLLYVLTLLPGVEPARRRLIVAALTGAIGFELLKLLLSGYMQGVAAKS-MY 250
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 251 GAFGVPVALLLWINFTAKLVLFCAAWTAT 279
>gi|111023775|ref|YP_706747.1| hypothetical protein RHA1_ro06817 [Rhodococcus jostii RHA1]
gi|110823305|gb|ABG98589.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 390
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 96/283 (33%), Gaps = 9/283 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF---LGAHQFVPT 61
+I ++ + A+ + LS+ P ++ + G+ V
Sbjct: 23 LRRALSVIGRTASKAWDDSIFGKAATAAFWQTLSLPPLLLGLLGMLGYVGGWFGPDTVDI 82
Query: 62 VIDVVFGAWPEVIAK-----PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ + V + I + VL + ++S L + + S+ + S+
Sbjct: 83 IQSKIINFSGTVFSDSVVEQIIRPTVGDVLERGRPEIVSLSFLLSLWAGSSAISTFVDSI 142
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
A+ E R R+ + ++ + V + P + V I
Sbjct: 143 VEAHGQQEARHPVWQRVFALLLYVMFLILAVFTLPLVALGPTLVGRVLPEA-WRTIGTEI 201
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ L L +GL ++ +L G + + ++ + Y+ +
Sbjct: 202 VDTFYYPGVGLLLIVGLTTLYKVALPRSLPWHRLLGGALVAGVFFLGASTCLRRYLSWVA 261
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+F + LG +LGAE NA++ ++ +
Sbjct: 262 GTGYTYGALATPIAFLLFTFFLGFAVVLGAEFNATVQEFWPAR 304
>gi|288921677|ref|ZP_06415946.1| ribonuclease BN [Frankia sp. EUN1f]
gi|288346946|gb|EFC81254.1| ribonuclease BN [Frankia sp. EUN1f]
Length = 299
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 95/266 (35%), Gaps = 9/266 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVF 67
D A + + + G A+ + A LS FP + ++ GF+ + +
Sbjct: 23 DHAVRAYQRYTGDGGDRCAASTTYFAFLSFFPIMALAFSVLGFVVDAYPDAQAKFTEQIN 82
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I + LA + S +++RI +++ E +
Sbjct: 83 DYLPGLADRLDVATIGRAKVGAGLIGLAGLLLAGLAWVSALRDSIRIIWHQSL---EAGN 139
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + R+ + +TL + V A ++ GN G + +
Sbjct: 140 FVMRRIRDVAILAGLGLTLAVSLVVTSLATSATDAFLRWIGLAGNTAAAWVTGLLALGVA 199
Query: 188 ALF--IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ +F+ +LP ++ +L + + + +L T + ++ + +Y
Sbjct: 200 LVIDMAVFVFIFRYLPERTNRDR-VLRAALLGAVGVELLKILGTWLVGQTTS-NPVYGTF 257
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ L+++ ++ + + A +
Sbjct: 258 AVIVGLLIWINIMMRWMLFVAAWAVT 283
>gi|294666747|ref|ZP_06731982.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
gi|292603492|gb|EFF46908.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
10535]
Length = 299
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 95/275 (34%), Gaps = 19/275 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F+E D A+ +S ALLS+ ++ ++ +
Sbjct: 1 MALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEALVQQIGQLAGG 59
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A+ I P G S L ++ L+ +LN +R + R
Sbjct: 60 SAAEVAQTVIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGL 119
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG +L L++ A+ + A + P T
Sbjct: 120 MAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP----------AVGYVTT 169
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + F++ +LP G + T + + +G YI T + S Y +
Sbjct: 170 LALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSA-YGSM 228
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ LV++Y V F +GA + A + +
Sbjct: 229 GTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 263
>gi|294626489|ref|ZP_06705088.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292599179|gb|EFF43317.1| ribonuclease BN [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 299
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 95/275 (34%), Gaps = 19/275 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F+E D A+ +S ALLS+ ++ ++ +
Sbjct: 1 MALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEALVQQIGQLAGG 59
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A+ I P G S L ++ L+ +LN +R + R
Sbjct: 60 SAAEVAQTVIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGL 119
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG +L L++ A+ + A + P T
Sbjct: 120 MAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP----------AVGYVTT 169
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + F++ +LP G + T + + +G YI T + S Y +
Sbjct: 170 LALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSA-YGSM 228
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ LV++Y V F +GA + A + +
Sbjct: 229 GTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 263
>gi|21244599|ref|NP_644181.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
gi|21110279|gb|AAM38717.1| ribonuclease BN [Xanthomonas axonopodis pv. citri str. 306]
Length = 299
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/275 (18%), Positives = 95/275 (34%), Gaps = 19/275 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F+E D A+ +S ALLS+ ++ ++ +
Sbjct: 1 MALLNRFIEIDVMTQAASLSFYALLSLA-PLLVLLLWLTASLYPPAQEALVQQIGQLAGG 59
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A+ I P G S L ++ L+ +LN +R + R
Sbjct: 60 SAAEVAQTVIRNATDQPGVGSLAGVWSTLLLFIGATAVFAQLQNALNLIFRTDKQRLDGL 119
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG +L L++ A+ + A + P T
Sbjct: 120 MAWLQKRVFSFGVILALGFLLIVSMIATTALQVVFARLPSVLP----------AVGYVTT 169
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ + F++ +LP G + T + + +G YI T + S Y +
Sbjct: 170 LALYSLAFAFLYRYLPDRTVDWRQAFLGGVITAVLFALGRYAIGVYIATAAPGSA-YGSM 228
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ LV++Y V F +GA + A + +
Sbjct: 229 GTLVILLVWMYYASVVFFVGALITAVIDERVRSHR 263
>gi|83815069|ref|YP_445387.1| YihY family protein [Salinibacter ruber DSM 13855]
gi|83756463|gb|ABC44576.1| YihY family protein [Salinibacter ruber DSM 13855]
Length = 369
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/273 (15%), Positives = 90/273 (32%), Gaps = 12/273 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
E+ + A I+ L+++ P ++ + G L V + P
Sbjct: 29 LYLELSEKHVFLWAQAIAFKVLVTIVPIVILATGVVGRVLQGKDAFTAVTRFIRELLPGS 88
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-------EALRISLNRAYRVVEMR 126
++ + D + Q+ A + S + A ++ ++
Sbjct: 89 QSQQLIDFLTQLQDASATIVGIGGIGLFLSAMSLFITLRIAVSNAFEQDWHQERSLLWGY 148
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + +I G + L +V L + FV + ++ A IW + +
Sbjct: 149 LFDVRMVIQVGGLFLMTVGLSVSLPSFVNEVIIGQFLGSEQWAQWLWGRAIWITGLLLPL 208
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS---TYSTMYA 243
L ++ +P + S L G + + W FT Y + +
Sbjct: 209 LLTTTMFFQLYYLVPQPSPRKRSALAGALLAAVLWETAKQAFTFYATYVGYGTGTEALGS 268
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ + ++Y GV ++GA + AS+ +
Sbjct: 269 TFGLIVAFVFWVYFSGVVLMIGAVV-ASLQEHR 300
>gi|317124332|ref|YP_004098444.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
gi|315588420|gb|ADU47717.1| ribonuclease BN [Intrasporangium calvum DSM 43043]
Length = 352
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 99/264 (37%), Gaps = 7/264 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
Y A + + + +G +A+ + A S+FP + + GF+ G + + D + G
Sbjct: 16 YRAWKRYGDANGDLLAAGVGYFAFFSIFPALALAFTVFGFVLQGRPDLLAAIADSMNGYL 75
Query: 71 PEV-IAKPITDEILQVLAVPAKGLFTISA---LAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + D I+ + A + L + + + A+R + + +
Sbjct: 76 PGMVRTESNPDGIISLAAPQSSTLTITGIVSVVTLLFSGLGWISAMRTGIRGVFGLDASP 135
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
++T + VLL + S + ++ LA + ALG +++ + +
Sbjct: 136 GSFVTAKLRDLGVLLTLGLGIAASAIMTSVVGGLAVEIAGWVALGGNAVLVTVVGLLVGV 195
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + ++ + L ++ G + + F ++ +T + + +A
Sbjct: 196 VFDTLLMVVLIRMLSGVPLPWANVRNGAVVGAVLLTAMKY-FGGVLIERATANPLLGAVA 254
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+ L +L ++ +L + A
Sbjct: 255 VAVGLLFWLNLMSRVVLLASAWAA 278
>gi|21323718|dbj|BAB98344.1| tRNA-processing ribonuclease BN [Corynebacterium glutamicum ATCC
13032]
Length = 385
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 91/263 (34%), Gaps = 18/263 (6%)
Query: 32 SLSALLSVFPFIVFGANLAGFLGAHQFVPTV---IDVVFGAWPEVIAKPITDEILQVLAV 88
+ ++LS+ P ++ G ++ A + D V PE + + I +
Sbjct: 81 TFFSILSIAPAVLLGYSVITIFLASDSTEILNLVRDEVNQYVPEDQSHVVNGVIDSIAGS 140
Query: 89 PAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
A G + + A + SS V A N Y E R+ + L + +
Sbjct: 141 AAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRSEGRTLIKRWAMLLFLNLALLLGI 200
Query: 147 VIMSFVFVAIPLALAYVRKFF-----------PALGNLLLIIWNGRIYATMLALFIGLIF 195
+I+ +V + + + I R + L + +
Sbjct: 201 IIILVSWVLNETLVMGIFAPIAEPLHLTNVLSFLTDRFMPIWIWVRFPVIVGVLIMFVAT 260
Query: 196 VHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P A+ K + G + ++ V Y F+ +S+ Y + S++ +
Sbjct: 261 LYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFYFTLFAAFSS-YGAVGSLLAVFIA 319
Query: 255 LYMLGVFFILGAELNASMIIYYW 277
L++ + I+G +++ +
Sbjct: 320 LWVFNICLIIGLKIDVEISRAKQ 342
>gi|309389373|gb|ADO77253.1| ribonuclease BN [Halanaerobium praevalens DSM 2228]
Length = 424
Score = 87.0 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 110/280 (39%), Gaps = 10/280 (3%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ----FVP 60
F ++ I + E D + A + LS+ PF++F + +
Sbjct: 17 FDLIILFIKRVYQKAKENDIFIHAMGMVYITTLSIVPFLIFSFYIITIFNFFGKVNIIID 76
Query: 61 TVIDVVFGAWPEVIAKPITDEIL-QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V ++ + + D + +L V + L TIS ++ + + + ++ N
Sbjct: 77 EVKSLILTNLAAGTGESLIDYLEVYILNVDLEQLGTISFVSLIFIIVFMLARVEMTFNNI 136
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + E R + + + ++ L + ++ ++ + + + L + N
Sbjct: 137 WNLKEHRDLFKRFVSFWTFITLGTFSITLLLTLSLLFVEKYLGL-----WLSGDQISQSN 191
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ F+ I ++ F+P K + + +F+ + +++ L+ Y TY+
Sbjct: 192 ILSHILFSFNFLFFISIYYFVPNTDVKPKAAILAGLFSGLLFILSKNLYAIYTANIITYN 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y L+ I L++LY++ + +LGA ++ + K
Sbjct: 252 QIYGPLSIIPIFLLWLYLIWLIILLGAVISYVLQNISSLK 291
>gi|33860655|ref|NP_892216.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33633597|emb|CAE18554.1| similar to serum resistance locus BrkB [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
Length = 308
Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 99/293 (33%), Gaps = 21/293 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
++ + ++ A E + + D +++ + L S FP ++ ++A +
Sbjct: 6 IQRSTTWIIKSLWGACERWSKSDCIDLSAAFAYYTLQSFFPILLISLSIASWFLGKQDGL 65
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I V P + + + + ++ + A+ + + N +L+
Sbjct: 66 DQQIISVAAQILPPSVVELVETTLFNLIDQGFGA-GILGAMFLLFTAGNAYLSLQRGSDR 124
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-----L 160
+N A++ R + + ++ + + +
Sbjct: 125 LWEDQLPSRRINSAWQEQASRFLRNRIEAFLVVFFIGFLMVLDQISANLRMIPTTVLEKI 184
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ F L ++ G+ ++ + + + LP+ K + ++PG I I
Sbjct: 185 SNSSNFISEFIIKLPLLQVGQFALPLVGFSLMALLLQALLPSRKVPLKPLIPGSILIGIG 244
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + I++ T Y + + +++++LGV G + +
Sbjct: 245 LTTLNLAVSKSILSLGTRFQAYGFIGGFLVLTLWVWLLGVVLYFGQCWSVVIA 297
>gi|300712103|ref|YP_003737917.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299125786|gb|ADJ16125.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 271
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/254 (16%), Positives = 92/254 (36%), Gaps = 15/254 (5%)
Query: 20 VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPIT 79
E+ A+ + A S+ P ++ + + + I+ V G I I
Sbjct: 18 REQHVTVTAAGLGYYAFNSLVPLLLLVTIAISIVYDPETTASAIESVSGLRATEIEPVIA 77
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+ A GL A Y + +A+ ++ + Y + RS +
Sbjct: 78 EVTGNGGARTRAGLIAAGIFA--YSTVTMFQAVNMAFSEIYGTRKRRSGLRKGTDTLLIF 135
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
+ + ++ V VA+ L + + + + A F+ + ++
Sbjct: 136 ATVLIAVSLIGAVGVALV------------LRVDSVAVSVLSVPLLLGAFFLAFLPMYYR 183
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P + +PG F+ ++W + A+ F Y T + +Y +++ L +LY+ G
Sbjct: 184 FPGQSVTLGEAMPGAAFSAVAWTLSALFFRVYAATADSV-ALYGIAGAVLLVLTWLYLGG 242
Query: 260 VFFILGAELNASMI 273
+ + GA NA +
Sbjct: 243 LILLFGAIFNAVLA 256
>gi|120403444|ref|YP_953273.1| ribonuclease BN [Mycobacterium vanbaalenii PYR-1]
gi|119956262|gb|ABM13267.1| ribonuclease BN [Mycobacterium vanbaalenii PYR-1]
Length = 344
Score = 86.6 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 103/277 (37%), Gaps = 13/277 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFVPTVI 63
+ I A+ ++ ++ ++ + LS+ P ++ A +A G V
Sbjct: 23 IRHITIRALSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYVAPLFGPDTLVTIQS 82
Query: 64 DVV----FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+V P V+++ I + ++ + ++ + + + S+ + A S+ A
Sbjct: 83 QLVSLAGRFFSPNVVSEIIEPTVRDIVRGARGEVVSLGFVISLWAGSSAISAFVDSITEA 142
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + G ++ V ++ + P +A + +
Sbjct: 143 HDQTPLRHPVRQRFYALGLYVVMLVGAIVAAPFLALGPRKVAEF-----IPDSWDSALQF 197
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+AL + + ++ +L G + +++ Y+ ++
Sbjct: 198 AYYPVLFVALVVSVNLLYRVSLPKPLPSHRLLLGSVLAAAVFLIATWGLRVYLTWITSTG 257
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y LA+ + L+F + LG ++GAELNA++ +
Sbjct: 258 YTYGALATPIAFLLFAFFLGFAIMIGAELNAAIEEEF 294
>gi|329942897|ref|ZP_08291676.1| ribonuclease BN-like family protein [Chlamydophila psittaci Cal10]
gi|332287490|ref|YP_004422391.1| putative inner membrane protein [Chlamydophila psittaci 6BC]
gi|313848069|emb|CBY17067.1| putative inner membrane protein [Chlamydophila psittaci RD1]
gi|325507308|gb|ADZ18946.1| putative inner membrane protein [Chlamydophila psittaci 6BC]
gi|328815157|gb|EGF85146.1| ribonuclease BN-like family protein [Chlamydophila psittaci Cal10]
gi|328914738|gb|AEB55571.1| ribonuclease BN, putative [Chlamydophila psittaci 6BC]
Length = 430
Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 88/263 (33%), Gaps = 1/263 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ A + + A +S L S P +VF L+ L A+ + V
Sbjct: 23 RIIRSFLLAPRVLLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFANLDWKEWLLVK 82
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + I + + + S + + +L LN+ +R
Sbjct: 83 FPDYKGPILAIVEAAYHSTTST-IGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTP 141
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L++ + +I+ ++ I + +L + + ++
Sbjct: 142 ISIQRLISYLIITLVSPMIFIIVCGSWIYITQIMPVEYARLFSLSHSITALYVFSRLTPY 201
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+++ L + FLP + + L + W++ +F V YS Y L
Sbjct: 202 FFIYLALFCCYAFLPRVAVQKTAALIASLTAGTIWIMFQKVFFCLQVYLFNYSFTYGALV 261
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
++ + L+ LY+ + ++ G
Sbjct: 262 ALPSFLLLLYLYAMIYLFGGAFT 284
>gi|302536385|ref|ZP_07288727.1| integral membrane protein [Streptomyces sp. C]
gi|302445280|gb|EFL17096.1| integral membrane protein [Streptomyces sp. C]
Length = 296
Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/265 (10%), Positives = 90/265 (33%), Gaps = 9/265 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + E +A+ I+ + L++FP I A + L + + + + +
Sbjct: 24 HAWRSYERLDRVHWTRLAAAITFISFLALFPLITVAAAVGAALLSQEQLDKLQKSLAEQV 83
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR--VVEMRSW 128
P + + + ++ A + ++ + + ++R L + + +
Sbjct: 84 PGISDQLDLEGLV----ANAGTVGLVAGALLLFTGIGWIGSMRDCLRAVWEKDDEDEGNP 139
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN--LLLIIWNGRIYATM 186
++ + +L + + V A+ + ++ +
Sbjct: 140 FLRKGKDGLVLLGLGGAALASAAASVIGASAVGKSAELLGIPREGAGGALLRAAAFGVGV 199
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+A F+ L+++ LP + ++ + + + +L + Y+ + S MY
Sbjct: 200 VAAFLLLLYLLTLLPGVEPPRGRLVQAALIGAAGFELLKLLLSGYMRGVAAKS-MYGAFG 258
Query: 247 SIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 259 VPIALLLWISFTTKLLLFCAAWTAT 283
>gi|90417468|ref|ZP_01225391.1| hypothetical protein GB2207_07317 [marine gamma proteobacterium
HTCC2207]
gi|90330709|gb|EAS45988.1| hypothetical protein GB2207_07317 [marine gamma proteobacterium
HTCC2207]
Length = 321
Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 70/183 (38%), Gaps = 6/183 (3%)
Query: 98 ALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
+ + + + N + R L+ + + L + L + + +
Sbjct: 1 MAIILVTALLMLSNIEKTFNHIWATTGSRKGLAGFLVYWAILSLGPLLLAVGMIMSTCLM 60
Query: 158 LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
V + + L ++ Y L ++ +++ +P K +++ G + T
Sbjct: 61 SLRLMVTE-----VDSLGLVALLFSYLPWLLTWLAFTLLYVAVPNCKVRVVYAAFGGLIT 115
Query: 218 WISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ + LF + S Y+ +Y A I L+++Y+L + + GAEL S+ + +
Sbjct: 116 TLLFETAKALFGQLVAH-SIYTNVYGAFAVIPLFLIWIYLLWMLILFGAELVRSLETFQY 174
Query: 278 RKK 280
+ +
Sbjct: 175 QGR 177
>gi|294507267|ref|YP_003571325.1| YihY family protein [Salinibacter ruber M8]
gi|294343595|emb|CBH24373.1| YihY family protein [Salinibacter ruber M8]
Length = 375
Score = 86.2 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 90/273 (32%), Gaps = 12/273 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVFGAWPEV 73
E+ + A I+ L+++ P ++ + G L V + P
Sbjct: 35 LYLELSEKHVFLWAQAIAFKVLVTIVPIVILATGVVGRVLQGKDAFTAVTRFIRELLPGS 94
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV-------EALRISLNRAYRVVEMR 126
++ + D + Q+ A + S + A ++ ++
Sbjct: 95 QSQQLIDFLTQLQDASATIVGIGGIGLFLSAMSLFITLRIAVSNAFEQDWHQERSLLWGY 154
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + ++ G + L +V L + FV + ++ A IW + +
Sbjct: 155 LFDVRMVVQVGGLFLMTVGLSVSLPSFVNEVIIGQFLGSEQWAQWLWGRAIWITGLLLPL 214
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS---TYSTMYA 243
L ++ +P + S L G + + W FT Y + +
Sbjct: 215 LLTTTMFFQLYYLVPQPSPRKRSALAGALLAAVLWETAKQAFTFYATYVGYGTGTEALGS 274
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
I+ + ++Y GV ++GA + AS+ +
Sbjct: 275 TFGLIVAFVFWVYFSGVVLMIGAVV-ASLQEHR 306
>gi|329121368|ref|ZP_08249994.1| YihY family protein [Dialister micraerophilus DSM 19965]
gi|327469777|gb|EGF15243.1| YihY family protein [Dialister micraerophilus DSM 19965]
Length = 265
Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/255 (17%), Positives = 103/255 (40%), Gaps = 4/255 (1%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
++ F+++D A A+ + +L + PF+VF N F A Q VI P+ +
Sbjct: 1 MVKRFIKDDVTAFAAESTYYFILGLVPFLVFFTNAILFFAAPQI--QVIIKFLHYLPQQL 58
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-RSWYITRL 133
+ + I +++ + I A + SS G+ + ++++ + ++W +
Sbjct: 59 EVSMAENIYRIIQGRSTVWLAIGLFGALWTSSQGINVIIRAMDKIFFKNRNIQNWITVSI 118
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
S + LL + +L++ + V + + +F L + + + L
Sbjct: 119 KSLLFTLLITFSLILSLGMIVFANALIYVIAYYFGIPEMFLEMWNIAKYAIPFTMMIFSL 178
Query: 194 IFVHLFLPAAK-SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ F PA K + IL +F ++ ++ +YI+ S Y L ++
Sbjct: 179 AAFYRFAPAKKCATWPVILVTSLFVTGILLLLTGIYGYYILEISKMGATYGSLIGLVVLF 238
Query: 253 VFLYMLGVFFILGAE 267
++ + + + G+E
Sbjct: 239 IWFRLASMVILTGSE 253
>gi|261367968|ref|ZP_05980851.1| YihY family protein [Subdoligranulum variabile DSM 15176]
gi|282569951|gb|EFB75486.1| YihY family protein [Subdoligranulum variabile DSM 15176]
Length = 281
Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 58/279 (20%), Positives = 115/279 (41%), Gaps = 4/279 (1%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ ++I+ + F+ ++ A +L L + FP +++ L + +
Sbjct: 1 MKQSMERAKEMIFAILGPFLGQNLPIFAGCATLFLLTASFPLLIWVLVLVNHMPDYSVTD 60
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ F I + D + + A + + +A+ Y +S+G+ A++ L R
Sbjct: 61 LAELMYQFLPQVPEIQDTVLDVLNNLSAQSTTFVASFAAITTLYSASSGMFAVQKGLQRL 120
Query: 120 YRVVEMRSWYITRLISFGYVL---LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ I + V L +V L+ AL + L
Sbjct: 121 TPGARFTLYDRLLAIVYTIVFEGLLLAVLLLQGLSSIFRPLSALLATNARWRWLIEWFRH 180
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
N + LF+ ++ ++ F+P K + LPG IFT + W+V + +F+ YIV F
Sbjct: 181 WINFSDLIAIPVLFVLILLIYTFVPGGKRSLRGQLPGTIFTTVGWLVFSRIFSFYIVHFW 240
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
S +Y L +I+ +++L ++ LGA LNA++
Sbjct: 241 KLSYIYGSLTAIILMILWLDIIINLLFLGAALNAALHRR 279
>gi|299533766|ref|ZP_07047137.1| ribonuclease BN [Comamonas testosteroni S44]
gi|298718182|gb|EFI59168.1| ribonuclease BN [Comamonas testosteroni S44]
Length = 326
Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 13/276 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ D+++ +++ DG M++ +S +LS+ P ++ L G+ +V T
Sbjct: 13 RRLAHPLQPLIDSVQLWLQADGLRMSAAMSFYGMLSLAPLLLAVVGLLGWWLDRSYVEST 72
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL----- 116
+I + E A+ + + L ++ L + GV +
Sbjct: 73 LISQIQSVVGERAAQLVKSALASAQNANQGSLASVLGLVMMLSGATGVFVELQASLDKLW 132
Query: 117 -----NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+R S I+RL YV+ L++ + AI + + +
Sbjct: 133 SMGEESRPQENKPWWSMAISRLWGLSYVVGLGFLLLVSMVLSTAIQMITKWANDELQLV- 191
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
L ++ + + + K +L G + + +G Y
Sbjct: 192 PLGPLMGLINEGLSFCIAVLLFWGLMRMGTGIKPVTRYLLLGSLTGAALFTIGKQALAWY 251
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ T + S Y S++ L++ Y + A
Sbjct: 252 LSTAAVVSA-YGAAGSLVVVLMWFYFTSAILLFSAA 286
>gi|91778791|ref|YP_553999.1| ribonuclease BN [Burkholderia xenovorans LB400]
gi|91691451|gb|ABE34649.1| Ribonuclease BN [Burkholderia xenovorans LB400]
Length = 300
Score = 86.2 bits (212), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 93/268 (34%), Gaps = 4/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ I+ F G +A ++ ALLS+ P ++ + + T + +
Sbjct: 19 FLLQTIKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRVVPQHVLLTALAHLLQWL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + E+ L + + L +FSS L +++ + +
Sbjct: 79 VPGQSNALVRELANFL-AHRAVIGWVLLLTMIFFSSLAFTVLENAMSIIFVHRVVVRRRH 137
Query: 131 TRLISFG---YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L + Y+L V L+I++FV + A F +L + +
Sbjct: 138 FLLSAMLPYCYILFLGVGLLIVTFVSSGLEAIGAEGMDLFGLHVSLQGLSRAVLYLLGLA 197
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L ++L +P + + L G + + W + + Y T S S +Y L
Sbjct: 198 GEVFVLTSIYLVMPVGRPSLKHALFGGVVAAVLWEITRHVLVWYFATLSQVSVVYGSLTM 257
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L L L + GA++ + +
Sbjct: 258 AIVILFSLEWLATLLLFGAQVISQYERF 285
>gi|295835818|ref|ZP_06822751.1| integral membrane protein [Streptomyces sp. SPB74]
gi|295825721|gb|EFG64428.1| integral membrane protein [Streptomyces sp. SPB74]
Length = 315
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/217 (17%), Positives = 83/217 (38%), Gaps = 6/217 (2%)
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
F +D + I I + + + +I + A + S V ++
Sbjct: 46 FEQHFLDATRTVLSDQGVHDIARPIFEDVTRGRPDVISIGFVFALWSGSRAVNVFIDTIT 105
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
Y + +R TRL+SFG ++ + I + VA P + +V + ++
Sbjct: 106 VMYGLDGVRGIVATRLLSFGLFIVGLLICSIALPLMVAGPDTVVHVLPWSG------TVV 159
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ + L ++ +S + +PG WVV + Y+ +
Sbjct: 160 QILYWPVVIVLGVVFLTTLYHVSVPVRSPWIEDVPGSFVALAMWVVCSFALRIYLTSTIE 219
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T+Y LA+ + L+++ + ++GA +NA++
Sbjct: 220 GPTIYGSLAAPVAVLLWIGVSAFAVLVGAAMNAAIDR 256
>gi|225874668|ref|YP_002756127.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
gi|225794226|gb|ACO34316.1| YihY family protein [Acidobacterium capsulatum ATCC 51196]
Length = 305
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/249 (18%), Positives = 93/249 (37%), Gaps = 2/249 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + E+ + A ++ +A+LS+FPFIV ++ + Q + V+ +
Sbjct: 22 WWPHVKSLAEYLTRTEVHTYAFSVAANAILSLFPFIVMLFMMSRQVFHSQAMTAVVGDMV 81
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ + + + +L P + S + SS+ L ++LN+ + V + RS
Sbjct: 82 SYFLPANQEFVVRNMA-LLVHPRGRVQVFSIVMLLISSSSVFLPLEVALNQVWGVKKSRS 140
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + ++IS G + + V+ A LA+V I
Sbjct: 141 YVVNQVISLGLAMAVGLLAVVSVAFTAAQNTVLAFVFFGHTHNFIFNGIAHFFLGITAAF 200
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
V+ LP K + +LP I T + W L+ + S Y A
Sbjct: 201 LSVSIFFLVYWVLPNRKLPVRVVLPTAIVTGLLWDGAKELYVMLLPWLDLRSA-YGPFAV 259
Query: 248 IMTCLVFLY 256
+T +++ +
Sbjct: 260 SVTLMMWAF 268
>gi|297626415|ref|YP_003688178.1| ribonuclease_BN [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922180|emb|CBL56748.1| Ribonuclease_BN [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 476
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 95/271 (35%), Gaps = 10/271 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF---LGAHQFVPTVIDVVF 67
++ A + + G A I+ ++L+ P ++F + G + + V +V
Sbjct: 41 HLWRANDRYNNRLGNQFAGGITYFSVLASVPVLMFAFSGLGLTLTVIRPALLDDVKGIVV 100
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR------ 121
+ + L+ + + I+ + A + + + ++ ++ +R
Sbjct: 101 ANLYPGPMRDTVLQYLEQYLYHWQTVGLIAIVVALWAGAGWMGNVKSAIRAMWRPEFDMT 160
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVR-KFFPALGNLLLIIWNG 180
+ + + + + L + V+++ V + L ++
Sbjct: 161 EDKHFFFVEVAVNALLLLGLIVLVGVLLAANTVFTGWGSELLGLAHLGELRISAGLLRLI 220
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ A++L + I + LP S S+L G + + V + T F+ +
Sbjct: 221 SLSASLLGGWALFICMFRVLPQTHSSWRSVLRGSAVAAVLFWVMQAVATQLAGVFAHNRS 280
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A+++ L+FL + + A A+
Sbjct: 281 AALWGATLIVGLLFLNLFARLLLYVAAWIAT 311
>gi|262202174|ref|YP_003273382.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
gi|262085521|gb|ACY21489.1| ribonuclease BN [Gordonia bronchialis DSM 43247]
Length = 426
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 99/285 (34%), Gaps = 9/285 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLS----ALLSVFPFIVFGANLAGFLG---A 55
+ + + + + ++ + + + +AG+ G
Sbjct: 91 PVLRNLHRLAWRTTVNAWDHGIVGWSAQAAFWQALSLPPLLLGLLGSVGYIAGWFGPDTV 150
Query: 56 HQFVPTVIDVVFGAWPEVIA-KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+I + E + IT + VL GL ++ + + + S+ V
Sbjct: 151 DVIYERIISFADRTFSESVVNDLITPTVDNVLNRGRVGLVSLGFVLSLWAGSSAVSCFIS 210
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
S+ A+ E+R+ R+ + + V + + P L +
Sbjct: 211 SIVHAHDQHEVRNPVWQRIFALLLYIGFLCAAVPLLPLVALGPNYLHDIVPQSWDPIITT 270
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
LI + ++L L + HL LP ++ G + + + + + + Y+
Sbjct: 271 LIDVGYFPFVSVLLLGVLTTLYHLALPNP-LPWHRLMGGAVLAGMVFWIASYILRIYLTA 329
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y LA+ + L+F + LG +LGAE NA++ + K
Sbjct: 330 VTRADYSYGALATPIAFLLFAFFLGFAIVLGAEFNAAVQALWPAK 374
>gi|145640209|ref|ZP_01795793.1| ribonuclease BN [Haemophilus influenzae R3021]
gi|145274795|gb|EDK14657.1| ribonuclease BN [Haemophilus influenzae 22.4-21]
Length = 208
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 83/210 (39%), Gaps = 9/210 (4%)
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++F + + + + I Q + +K + + ++ + + + +LN + +
Sbjct: 1 MIFTNFAPSASDMVGEYIDQFVLN-SKKMSAVGIISLIAVALMLINNIDRTLNSIWHNSQ 59
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
RS + I + + L + + + + I + L +
Sbjct: 60 SRSPLSSFAIYWMILTLGPLIIGVSIGISSYIKIMFEQSEHLSLGLK--------LLSFV 111
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + ++ +P K KI G I + +G FT YIVTF +Y +Y
Sbjct: 112 PFLFTWFIFTLIYAVVPNKKVKIKHSAYGAFLAAIFFTLGKQAFTWYIVTFPSYQLIYGA 171
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMII 274
+A++ L+++ + + ++GA+L +++
Sbjct: 172 MATLPIMLLWIQISWLVVLVGAQLASTLDE 201
>gi|241896654|ref|ZP_04783950.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
gi|241870135|gb|EER73886.1| ribonuclease BN [Weissella paramesenteroides ATCC 33313]
Length = 311
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 61/270 (22%), Positives = 115/270 (42%), Gaps = 6/270 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++ I+ D +S I+ LLS+FP IV L +LG + T + A
Sbjct: 24 KLVATIIDVTSRVDIITASSSIAYFGLLSIFPAIVILGTLLPYLGLK--IDTALKYAQTA 81
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
PE + I I +L+ G+ + S + + S V ++RI+ N Y V
Sbjct: 82 VPESVFTFIEPIIRSILSQNGVGVLSASIIITLWSLSRVVSSIRIAQNGIYNVQANSVAI 141
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R IS ++++ ++ + V + I + + + P N++ I + + +L L
Sbjct: 142 FDRFISMFWLII----ILAIIGVLLIIASVGSNILEALPISSNIVYQIESAKRLVVILGL 197
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FIG + LP K +I+ IL G I + A F Y+ + T Y L+S +
Sbjct: 198 FIGAFLFNTLLPIKKPRIIWILIGTIIQITLVIWLAKAFGWYVNIAAQAFTFYQALSSAI 257
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L+++ + + ++G + A + + +
Sbjct: 258 ILLLWINFIALASLIGTIITAILEELFPPR 287
>gi|319760991|ref|YP_004124928.1| ribonuclease bn [Alicycliphilus denitrificans BC]
gi|317115552|gb|ADU98040.1| ribonuclease BN [Alicycliphilus denitrificans BC]
Length = 299
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 36/272 (13%), Positives = 96/272 (35%), Gaps = 8/272 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
+ A++ +++ +G M++ +S +LS+ P ++ + G+ ++ +++ V G
Sbjct: 18 LLRAVQLWLDAEGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWVDKAYLESSLVAQVQGVM 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV------E 124
E A+ + + A L +I+ + GV A S V
Sbjct: 78 GERGAEVVRMALASAKAPAQGWLASIAGFVLLLSGATGVFAELQSALARLWVHGRAAPER 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
W++ L G + ++ +++ + ++ + + +++
Sbjct: 138 KPWWHMASLRLRGLAYVLAIGFLLLISLVLSTAIKVLATWAGALLPFGAGVLLQFVNEAV 197
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + K + ++ G + G L Y+ T + S Y
Sbjct: 198 AFAVAVLLFVGLMRIGSGPKPPLSCLVLGAAVGAALFTAGKQLLAWYLSTAAVVSA-YGA 256
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
S++ L+++Y + GA ++
Sbjct: 257 AGSLVVLLMWIYFSSAVLLFGASCARALDEAR 288
>gi|145295109|ref|YP_001137930.1| hypothetical protein cgR_1052 [Corynebacterium glutamicum R]
gi|140845029|dbj|BAF54028.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 368
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 91/263 (34%), Gaps = 18/263 (6%)
Query: 32 SLSALLSVFPFIVFGANLAGFLGAHQFVPTV---IDVVFGAWPEVIAKPITDEILQVLAV 88
+ ++LS+ P ++ G ++ A + D V PE + + I +
Sbjct: 64 TFFSILSIAPAVLLGYSVITIFLASDSTEILNLVRDEVNQYVPEDQSHVVNGVIDSIAGS 123
Query: 89 PAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
A G + + A + SS V A N Y E R+ + L + +
Sbjct: 124 AAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRSEGRTLIKRWAMLLFLNLALLLGI 183
Query: 147 VIMSFVFVAIPLALAYVRKFF-----------PALGNLLLIIWNGRIYATMLALFIGLIF 195
+I+ +V + + + I R + L + +
Sbjct: 184 IIILVSWVLNETLVMGIFAPIAEPLHLTNVLSFLTDRFMPIWMWVRFPVIVGVLIMFVAT 243
Query: 196 VHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P A+ K + G + ++ V Y F+ +S+ Y + S++ +
Sbjct: 244 LYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFYFTLFAAFSS-YGAVGSLLAVFIA 302
Query: 255 LYMLGVFFILGAELNASMIIYYW 277
L++ + I+G +++ +
Sbjct: 303 LWVFNICLIIGLKIDVEISRAKQ 325
>gi|62185159|ref|YP_219944.1| putative inner membrane protein [Chlamydophila abortus S26/3]
gi|62148226|emb|CAH63985.1| putative inner membrane protein [Chlamydophila abortus S26/3]
Length = 430
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 1/262 (0%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ A + + A +S L S P +VF L+ L A+ + V F
Sbjct: 24 IIRSFLLAPRVLLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFANLDWKEWLLVKF 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ I + + + S + + +L SLN+ +R
Sbjct: 84 PDYKGPILAIVEAAYHSTTSN-IGLVLVGSFFVFCWAGILMLLSLEDSLNKIFRTGWTPI 142
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ F L++ + +I+ ++ I + +L + + ++
Sbjct: 143 SIQRLISYFIITLVSPMIFIIVCGSWIYITQIMPVEYAKLFSLSHSITALYVFSRLTPYF 202
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ L + FLP + + L + W+ +F V YS Y L +
Sbjct: 203 FIYFALFCCYAFLPRVSVQKTAALVASLTAGTIWITFQKVFFCLQVYLFNYSFTYGALVA 262
Query: 248 IMTCLVFLYMLGVFFILGAELN 269
+ + L+ LY+ + ++ G
Sbjct: 263 LPSFLLLLYLYAMIYLFGGAFT 284
>gi|19552177|ref|NP_600179.1| hypothetical protein NCgl0913 [Corynebacterium glutamicum ATCC
13032]
gi|62389842|ref|YP_225244.1| hypothetical protein cg1086 [Corynebacterium glutamicum ATCC 13032]
gi|41325177|emb|CAF19658.1| putative membrane protein [Corynebacterium glutamicum ATCC 13032]
Length = 368
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 91/263 (34%), Gaps = 18/263 (6%)
Query: 32 SLSALLSVFPFIVFGANLAGFLGAHQFVPTV---IDVVFGAWPEVIAKPITDEILQVLAV 88
+ ++LS+ P ++ G ++ A + D V PE + + I +
Sbjct: 64 TFFSILSIAPAVLLGYSVITIFLASDSTEILNLVRDEVNQYVPEDQSHVVNGVIDSIAGS 123
Query: 89 PAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTL 146
A G + + A + SS V A N Y E R+ + L + +
Sbjct: 124 AAAGQVGVAVGVITALWTSSAYVRAFSRCANAVYGRSEGRTLIKRWAMLLFLNLALLLGI 183
Query: 147 VIMSFVFVAIPLALAYVRKFF-----------PALGNLLLIIWNGRIYATMLALFIGLIF 195
+I+ +V + + + I R + L + +
Sbjct: 184 IIILVSWVLNETLVMGIFAPIAEPLHLTNVLSFLTDRFMPIWIWVRFPVIVGVLIMFVAT 243
Query: 196 VHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
++ + P A+ K + G + ++ V Y F+ +S+ Y + S++ +
Sbjct: 244 LYYWAPNARPWKFRWLSLGSFLAIVGILLAGVGLNFYFTLFAAFSS-YGAVGSLLAVFIA 302
Query: 255 LYMLGVFFILGAELNASMIIYYW 277
L++ + I+G +++ +
Sbjct: 303 LWVFNICLIIGLKIDVEISRAKQ 325
>gi|330822853|ref|YP_004386156.1| ribonuclease BN [Alicycliphilus denitrificans K601]
gi|329308225|gb|AEB82640.1| ribonuclease BN [Alicycliphilus denitrificans K601]
Length = 299
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/272 (13%), Positives = 96/272 (35%), Gaps = 8/272 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
+ A++ +++ +G M++ +S +LS+ P ++ + G+ ++ ++I V G
Sbjct: 18 LLRAVQLWLDAEGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWVDKAYLESSLIAQVQGVM 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV------E 124
E A+ + + A L +I+ + GV A S V
Sbjct: 78 GERGAEVVRMALASAKAPAQGWLASIAGFVLLLSGATGVFAELQSALARLWVHGRAAPER 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
W++ L G + ++ +++ + ++ + + +++
Sbjct: 138 KPWWHMASLRLRGLAYVLAIGFLLLISLVLSTAIKVLATWAGALLPFGAGVLLQFANEAV 197
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + K + ++ G + G L Y+ T + S Y
Sbjct: 198 AFAVAVLLFVGLMRIGSGPKPPLSCLVLGAAVGAALFTAGKQLLAWYLSTAAVVSA-YGA 256
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
S++ L+++Y + GA ++
Sbjct: 257 AGSLVVLLMWIYFSSAVLLFGASCARALDEAR 288
>gi|317470319|ref|ZP_07929712.1| ribonuclease BN family protein [Anaerostipes sp. 3_2_56FAA]
gi|316902227|gb|EFV24148.1| ribonuclease BN family protein [Anaerostipes sp. 3_2_56FAA]
Length = 212
Score = 85.9 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 51/212 (24%), Positives = 98/212 (46%)
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ PE + + I + + + + + +S G+ ++ LN + + E
Sbjct: 1 MNYYLPEQYSVSLVAVINSLYGKITTTYMSFTIITLLWSASKGILSMMTGLNTIHEIPEK 60
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R++++ R IS Y+ +V ++I V + L + +F+P L N ++ R
Sbjct: 61 RNYFVLRFISTMYIAFIAVAVLIGIIVLLFGNTLLNQLYQFYPFLSNQHIVFLLIRFGIA 120
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
F+ ++ FLP+ K ++PGVIF+ W++ + LF+ Y F +S MY GL
Sbjct: 121 FFIFFLVFFIMYRFLPSEHFKARQVMPGVIFSSAGWIILSSLFSIYFDNFKFFSIMYGGL 180
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
I+ L +LY + +GAELN ++ +
Sbjct: 181 TGILLTLFWLYFCMMILFIGAELNQYIMKNHK 212
>gi|311894391|dbj|BAJ26799.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 341
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/272 (12%), Positives = 91/272 (33%), Gaps = 16/272 (5%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ ++ + ++ G +A+ I+ +S+ P ++ + GF+ G + V+D
Sbjct: 23 FVVGVVKKYGDDRGGLLAALITYYGFVSLVPLLLLLSTALGFVLHGHPEAQRAVLDSALA 82
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P +I + + V + + Y + + L+ ++ + V +R
Sbjct: 83 DFP-IIGDQLRGNVHSVR--GSGLALVVGVAGLLYGALGIAQVLQHAMAEVWNVPGVRRP 139
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + + F + L L+ G + + +
Sbjct: 140 GY----------WSRLGRSLALFGVLGGGLLLSTAAAALVGAALGGPAARVGGLLLSAVL 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLAS 247
+ + L + ++LPG + + V + + +Y A+
Sbjct: 190 NSLLFLACLRILTPKEVAARALLPGSLLAGPLFTVLQAFGAVLVAHQLRHATAVYGFFAT 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L +LY+ + AE N + W +
Sbjct: 250 VIGLLSWLYLAAQVTVYAAESNTVLARRLWPR 281
>gi|328461932|gb|EGF34140.1| hypothetical protein AAULH_03626 [Lactobacillus helveticus MTCC
5463]
Length = 282
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 50/252 (19%), Positives = 101/252 (40%), Gaps = 8/252 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + I+ L S+FP I+ N+ + + +P+ ++ I
Sbjct: 23 LSQGEIIDSSIVIAYYILFSIFPIIIIIGNVLPLFHIDTA--PIAKYLNLIFPDQVSSFI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITR 132
I +L + G + + A + SN V A+R+ NR Y V ++ ++ TR
Sbjct: 81 MPIINSLLKTTSTGYISFGIILAIWSFSNLVNAIRLGENRLYGVHQVELKLSMLNFLWTR 140
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
LI + L + + V L + F + + I++ R L + +
Sbjct: 141 LIMVIFTTLMIIIFTAVGVVLAFGQELLDLMDAIFKIPVHEVGKIFSYRYPVIFLIIILA 200
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ +++ LP K K I PGV T W+ + LF+ Y+ F Y + + + +
Sbjct: 201 VFYLNYVLPNIKLKKRVIWPGVFVTSCGWIALSFLFSFYLHNFPITWKNYGIVGTFIIFM 260
Query: 253 VFLYMLGVFFIL 264
++L + + F +
Sbjct: 261 LWLNIASLLFFI 272
>gi|323357076|ref|YP_004223472.1| hypothetical protein MTES_0628 [Microbacterium testaceum StLB037]
gi|323273447|dbj|BAJ73592.1| predicted membrane protein [Microbacterium testaceum StLB037]
Length = 399
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 98/270 (36%), Gaps = 13/270 (4%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
HF++ +G+ +A+ +S L +VF + G G+ + +I ++ P
Sbjct: 53 RVWRHFLQHNGFLLAAGMSYQGLFAVFSALYLSFAAVGIWLGGSKAAIDGLIGIINSYIP 112
Query: 72 EVIAK---PITDEILQVLAVPAKGLFTISALAAA---YFSSNGVEALRISLNRAYRV-VE 124
+I+K D++ V K L A+AA + + V R ++ + + +
Sbjct: 113 GLISKNGLVQPDKVEAVAQESGKLLGITGAIAAIVVIWTAIGFVTFTRRAVRDTFGLPFD 172
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI-- 182
MR++ + + F LL + L++ + + A+ V R
Sbjct: 173 MRNYVLLKARDFVASLLFGLALLVGALLGSITTGAVDLVFGILGWDRETPGWTIGARAVS 232
Query: 183 -YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ L + FL PG + VV + +V T + +
Sbjct: 233 ALVAFGVNTVALASLFRFLTGTTLTWRRAWPGALVGAGGMVVLQIGAGFLLVYTPT-NPL 291
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A+++ L++ +G+ ++ A A
Sbjct: 292 LGTFAALIGFLLWFRFIGIVILVSAAWIAV 321
>gi|264676371|ref|YP_003276277.1| ribonuclease BN [Comamonas testosteroni CNB-2]
gi|262206883|gb|ACY30981.1| ribonuclease BN [Comamonas testosteroni CNB-2]
Length = 326
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 13/276 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ D+++ +++ DG M++ +S +LS+ P ++ L G+ +V T
Sbjct: 13 RRLAHPLQPLIDSVQLWLQADGLRMSAAMSFYGMLSLAPLLLAVVGLLGWWLDRSYVEST 72
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL----- 116
+I + E A+ + + L ++ L + GV +
Sbjct: 73 LISQIQSVVGERAAQVVKSALASAQNANQGSLASVLGLVMMLSGATGVFVELQASLDKLW 132
Query: 117 -----NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+R S I+RL YV+ L++ + AI + + +
Sbjct: 133 SMGEESRPQENKPWWSMAISRLWGLSYVVGLGFLLLVSMVLSTAIQMITKWANDELQLV- 191
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
L ++ + + + K +L G + + +G Y
Sbjct: 192 PLGPLMGLINEGLSFGIAVLLFWGLMRMGTGIKPVTRYLLLGSLTGAALFTIGKQALAWY 251
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ T + S Y S++ L++ Y + A
Sbjct: 252 LSTAAVVSA-YGAAGSLVVVLMWFYFTSAILLFSAA 286
>gi|325110756|ref|YP_004271824.1| ribonuclease BN [Planctomyces brasiliensis DSM 5305]
gi|324971024|gb|ADY61802.1| ribonuclease BN [Planctomyces brasiliensis DSM 5305]
Length = 283
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 55/276 (19%), Positives = 106/276 (38%), Gaps = 7/276 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+F +I I ++ A+ I+ +L ++ P +VF +AG + + Q I
Sbjct: 2 IRSLFGMIRQIIANWSLHQNSRNAAAIAYFSLFTLAPILVFATMIAGMVISEQAAEYEIR 61
Query: 65 VVFGAWPEVIAKPITDEI--LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +W + I D I L S L Y +S+ V LR++LN +
Sbjct: 62 NLLSSWIGASGQQIADSIFTNAHFFKHGPVLIIASTLVLIYGASSSVAQLRLALNGIFDE 121
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF----PALGNLLLIIW 178
E +L++V++++ + VA+ +A + L L I
Sbjct: 122 SERVDVDSRMHSFLIGRVLSAVSMIVFILLIVALLIAGVALHSQSALLKQWGSTLPLTIG 181
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
++ + V+ +LP K + G +F + + +G F Y+ S
Sbjct: 182 LVSTAVSVSIQTVLFALVYQYLPPLKRWDRTTWIGALFAAVLFELGRWGFGIYLARSSVA 241
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ Y +I+ LV+ + +LGAE+ A +
Sbjct: 242 NA-YGPSNAIVAFLVWTFFATQSLLLGAEVKAFLSQ 276
>gi|312139428|ref|YP_004006764.1| ribonuclease bn [Rhodococcus equi 103S]
gi|325672683|ref|ZP_08152379.1| ribonuclease BN [Rhodococcus equi ATCC 33707]
gi|311888767|emb|CBH48079.1| putative ribonuclease BN [Rhodococcus equi 103S]
gi|325556560|gb|EGD26226.1| ribonuclease BN [Rhodococcus equi ATCC 33707]
Length = 369
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/285 (14%), Positives = 99/285 (34%), Gaps = 9/285 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA---HQFV 59
F ++ ++ + ++ + LS+ P ++ G++G V
Sbjct: 11 RPFKRCAQVVGRTASKAWDDSIFGKSATAAFWQTLSLPPLLLGLLGSLGYVGGWFGPNTV 70
Query: 60 PTVIDVVFGAWPEVIAK-----PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ + V ++ I + VL + ++ L + + S+ +
Sbjct: 71 EIIQSKIITFSHTVFSENVVDQIIQPTVGDVLGRGRPEIISVGFLLSLWAGSSAISTFVD 130
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
S+ A+ + R R+ + + + V + P + V
Sbjct: 131 SIVEAHGQQDARHPVWQRVFALLLYVGFLILAVFTLPLVALGPTIIGRVLPE-SWHTVGT 189
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
++ A L L IGL ++ +L G + + ++ + + Y+
Sbjct: 190 EMVDAFYYPAVGLLLIIGLTTLYKVALPKSLPWHRLLGGALLAGVFFMAASTILRWYLSA 249
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ Y LA+ + L+F + LG +LGAE NA++ ++ +
Sbjct: 250 IAGTGYTYGALATPIAFLLFTFFLGFAVVLGAEFNATIQEFWPAR 294
>gi|296171840|ref|ZP_06852939.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295893924|gb|EFG73693.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 330
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/277 (16%), Positives = 110/277 (39%), Gaps = 13/277 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLGAHQFVP 60
++ + + ++ ++ ++ + LS+ P + + A L G
Sbjct: 13 IWRLSVRTLAKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAPLFGPDTLTAIEK 72
Query: 61 TVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++I + + P V+ + I I V A + ++ L + + S+ + A ++ A
Sbjct: 73 SIISAIRSFFSPSVVNEIIEPTIRDVTANARGEVVSVGFLISMWAGSSAISAYVDAVVEA 132
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R RL + ++ V +V + V V P ++ +L ++
Sbjct: 133 HDQTPLRHPVRQRLFALFLYVVMLVFVVCAAPVLVVGPRKVSE-----HIPYDLANVLRY 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A +L L +G++ ++ +L G + +++ + Y+ ++
Sbjct: 188 GYYPALILGLLVGVVILYRVALPEPLPTHRLLFGAVLATAVFLIATLGLRVYLGWITSTG 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y LA+ + L+F + G +LGAE NA++ +
Sbjct: 248 YTYGALATPIAFLLFAFFGGFAVMLGAEFNAAIQEEF 284
>gi|55378011|ref|YP_135861.1| ribonuclease BN-like [Haloarcula marismortui ATCC 43049]
gi|55230736|gb|AAV46155.1| ribonuclease BN-like [Haloarcula marismortui ATCC 43049]
Length = 345
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 47/275 (17%), Positives = 90/275 (32%), Gaps = 20/275 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR +++ + E MA I+ A F I+ L
Sbjct: 1 MRFSRARTEEVLRALVHEIRAERLTFMAGSIAYHA----FLSILPLLLLVLTFVQRTENV 56
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T+ + G V+ + I Q L + + + S L + + Y
Sbjct: 57 TLRASIVGIMEAVLTTQASGIIQQGLTEADASVSALGVGFLLWGSLRIFRGLDTAFSDIY 116
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
++ ++ +V ++ S + +P + +
Sbjct: 117 ETGASNTFLDQLGDGLVLLVTVAVAILSASALGSVLPETGS------------GPLWTVA 164
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
LF+ ++ P + +PGV F I V VLFT + + +
Sbjct: 165 SGLVRAAGLFVVFYPMYYIFPDTDVSPLEAVPGVAFAAIGLTVAQVLFTAFKSGSTGGNI 224
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
+ ASI+ L +LY++G+ +LGA +NA +
Sbjct: 225 I----ASILVLLSWLYIIGLVILLGAAINAVLSNR 255
>gi|305431753|ref|ZP_07400920.1| YihY family protein [Campylobacter coli JV20]
gi|304444837|gb|EFM37483.1| YihY family protein [Campylobacter coli JV20]
Length = 268
Score = 85.5 bits (210), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 96/257 (37%), Gaps = 13/257 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I+ + + +++ A+ +S +LS+ P + ++ + + + + A+
Sbjct: 4 IFAILSNLRDKEILNYAAALSFYTILSLIPILFVCFSVFTQISSFKAYYEKAKQIIFAFL 63
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I L + L + +A + S +NR + E + + +
Sbjct: 64 IPAQQDIVAAYLDTFLNNSVNLGIVGLIAMTFTSLAFFSGYDFVINRITK-SEPKGLWQS 122
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + L + L + ++ I AL + F +
Sbjct: 123 ISSYWTLLTLVPLGLGLSFYISGLIQKALDDYKIGFNFFE------------ILPFVIIW 170
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
GL F+ K + S++ W +G LF +YIV TY+++Y ++I+
Sbjct: 171 GLFFISYSSSIQKGTLKSLIFVSFAAGAIWYIGKNLFVYYIVYNKTYASVYGSFSTILFF 230
Query: 252 LVFLYMLGVFFILGAEL 268
+++Y+ + ++ G ++
Sbjct: 231 FIWIYISWIVYLFGIKI 247
>gi|89898267|ref|YP_515377.1| tRNA-processing ribonuclease BN [Chlamydophila felis Fe/C-56]
gi|89331639|dbj|BAE81232.1| tRNA-processing ribonuclease BN [Chlamydophila felis Fe/C-56]
Length = 430
Score = 85.5 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/263 (14%), Positives = 87/263 (33%), Gaps = 1/263 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ A + + + A +S L S P +VF L+ L + + V
Sbjct: 23 RIVRSFLLAPKVLLRNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFVNLDWKEWLLVK 82
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + I + + + S + + +L LN+ +R
Sbjct: 83 FPDYKGPILAIVEAAYRSTTSN-IGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTP 141
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ L++ + +I+ ++ I + +L + + ++
Sbjct: 142 ISIQRLVSYLIITLVSPMIFIIVCGSWIYITQIMPVQYARLFSLSHSITALYVFSRLTPY 201
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +++ L + FLP + + + W++ +F YS Y L
Sbjct: 202 LFIYLALFCFYAFLPRVSVQKTAAFISALTAGTLWIIFQKVFFCLQFYLFNYSFTYGALV 261
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
++ + L+ LY+ + ++ G
Sbjct: 262 ALPSFLLLLYLYAMIYLFGGAFT 284
>gi|319946746|ref|ZP_08020980.1| ribonuclease BN [Streptococcus australis ATCC 700641]
gi|319746794|gb|EFV99053.1| ribonuclease BN [Streptococcus australis ATCC 700641]
Length = 322
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 49/284 (17%), Positives = 113/284 (39%), Gaps = 7/284 (2%)
Query: 1 MREYFCIV--FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M+++ + I + ++ + + ++ L+S+ P ++ AN+ +
Sbjct: 1 MKKFLKWLGQRPFIKGFLRFYMASESDITSIAVAYYLLISILPLLLIAANILPYFQIRPT 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
++ + P + + + I VL P+ GL + S ++A + SS + L+ + N+
Sbjct: 61 --QILLTLREVLPASMYRIVLQVISSVLTKPSTGLLSFSIISALWVSSQCIAYLQRAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+Y V + R +R+ S + + + + + V + F ++ L +
Sbjct: 119 SYGVEKERGIIWSRIFSILISFALQGLFGLSLVLTMFGRMIIRSVYEIFKFDESIYLRLL 178
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
N + LF+ L+ ++ LP K + PG IF + +F Y+ + T
Sbjct: 179 NISGPSVYFLLFLTLLLLYYTLPNIKIPKFRYVFPGAIFVTAVLYLTLNIFWKYVDHYIT 238
Query: 238 YSTMYAGLASIM--TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
S++ + + ++ I+G LNAS+ +
Sbjct: 239 SFLDARFFGSVLLAIIMFWFILVAKVLIIGCILNASIQYAIEAR 282
>gi|218460242|ref|ZP_03500333.1| putative ribonuclease protein [Rhizobium etli Kim 5]
Length = 150
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 92/150 (61%), Positives = 116/150 (77%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG LA FLGA QF
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALASFLGADQFSS 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T I ++F WPE IAKP+ D++LQVL + GL TIS LAAAYF+SNGVEALRISLNRAY
Sbjct: 61 TAIHLIFDTWPEAIAKPLADQVLQVLTIQRGGLLTISVLAAAYFASNGVEALRISLNRAY 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMS 150
RV E R+WY TRL S GYVL+A + +S
Sbjct: 121 RVQETRAWYFTRLASLGYVLIAVIIFAAIS 150
>gi|307720260|ref|YP_003891400.1| ribonuclease BN [Sulfurimonas autotrophica DSM 16294]
gi|306978353|gb|ADN08388.1| ribonuclease BN [Sulfurimonas autotrophica DSM 16294]
Length = 274
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 93/281 (33%), Gaps = 12/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFV 59
M E V I + FV+++ A+ +S + ++ P ++ + + ++
Sbjct: 1 MNEKLTTVIKQIKIFVSSFVDKELTLFAASLSFYTIFTIIPLLLIIMAILTSMPTFTEYY 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ +F V + + +I L +K + I +A S + NR
Sbjct: 61 EKIQGFIFSNLMPVNSDTVMFQINGFLQNSSK-MGAIGFIAILVSSLLFFKNFEYIANRI 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ T S I V I +A + L N
Sbjct: 120 FHAKS-----RTLWESITTYWTLLTLTPIALGVSFYITGYIAALMASNSFTSGL-----N 169
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ ++ + AK + I + V F +Y+ +Y+
Sbjct: 170 ILPLVPYIIIWGLFFLIFQIAANAKINPKASAISSFIISIIFSVSKNAFIYYVFLNKSYT 229
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
TMY A +M +++Y+ + F+ G +L + Y +K+
Sbjct: 230 TMYGSFAILMFLFLWIYVSWIIFLYGLKLCHIIDEIYKKKQ 270
>gi|57168097|ref|ZP_00367236.1| ribonuclease BN, putative [Campylobacter coli RM2228]
gi|57020471|gb|EAL57140.1| ribonuclease BN, putative [Campylobacter coli RM2228]
Length = 268
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/257 (15%), Positives = 96/257 (37%), Gaps = 13/257 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I+ + + +++ A+ +S +LS+ P + ++ + + + + A+
Sbjct: 4 IFAILSNLRDKEILNYAAALSFYTILSLIPILFVCFSVFTQISSFKAYYEKAKQIIFAFL 63
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ I L + L + +A + S +NR + E + + +
Sbjct: 64 IPAQQDIVAAYLDTFLNNSVNLGIVGLIAMTFTSLAFFSGYDFVINRITK-SEPKGLWQS 122
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + L + L + ++ I AL + F +
Sbjct: 123 ISSYWTLLTLVPLGLGLSFYISGLIQQALDGYKIGFNFFE------------ILPFVIIW 170
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
GL F+ K + S++ W +G LF +YIV TY+++Y ++I+
Sbjct: 171 GLFFISYSSSIQKGTLKSLIFVSFAAGAIWYIGKNLFVYYIVYNKTYASVYGSFSTILFF 230
Query: 252 LVFLYMLGVFFILGAEL 268
+++Y+ + ++ G ++
Sbjct: 231 FIWIYISWIVYLFGIKI 247
>gi|183982020|ref|YP_001850311.1| hypothetical protein MMAR_2006 [Mycobacterium marinum M]
gi|183175346|gb|ACC40456.1| conserved membrane protein [Mycobacterium marinum M]
Length = 324
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/275 (15%), Positives = 108/275 (39%), Gaps = 13/275 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLGAHQFVP 60
++ I + ++ ++ ++ + LS+ P + + A L G
Sbjct: 13 IWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAPLFGQDTLPAIEK 72
Query: 61 TVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
T+I + + P V+ + I I + A + ++ L + + S+ + + ++ A
Sbjct: 73 TIISMTHRFFSPSVVDEIIEPTIRDITANARGEVVSVGFLISLWAGSSAISSYVDAIVEA 132
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + ++ + +VI + V V P ++ N+ ++
Sbjct: 133 HDQTPLRHPVRQRFFALFLYVVGLLFIVISAPVAVMGPRKVSE-----HIPDNMSNLMHY 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A + L +G+I ++ ++ G + +++ + Y+ +
Sbjct: 188 GYYPALIAVLTVGVIILYRVSLPVPLPTHRLILGAVLAMAVFLIATLGLRFYLGWITHTG 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L++ + L+F + G ++GAELNA++
Sbjct: 248 YTYGALSTPIAFLLFAFFGGFAVMIGAELNAAIQE 282
>gi|254775220|ref|ZP_05216736.1| hypothetical protein MaviaA2_11191 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 340
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/273 (13%), Positives = 96/273 (35%), Gaps = 18/273 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+I + + ++ G +A+ I+ AL+S+FP ++ G + G V+
Sbjct: 17 VIVGVVYKYNDDQGGYLAALITYYALVSLFPLLLLLTTGLGVILAGRPDLQAQVLHSTLS 76
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P I ++ + I A Y +A++ +++ + V + +
Sbjct: 77 EFP-----VIGSQLHHPEGLSGGAAGVIVGLAGALYGGLGVGQAVQNAMDSVWAVPKHKR 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + V +++ V + +A + A L + G ++
Sbjct: 132 PNP---------IRSRVRSLLLLLVLGSAAIAATLLAAAGQATAGLGFLGKAGLALTSVA 182
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY-STMYAGLA 246
+ + + A + PG + + W + Y+ S + A
Sbjct: 183 INALICLVLFRLTTARALSYRQVWPGAVAAALVWQLLQWFGAGYVAHVVKRASATNSVFA 242
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L FL++ ++ AE+N ++ + +
Sbjct: 243 LVLGALAFLFLASTVLVVCAEVNVVLVERLYPR 275
>gi|123967648|ref|YP_001008506.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. AS9601]
gi|123197758|gb|ABM69399.1| serum resistance locus BrkB-like protein [Prochlorococcus marinus
str. AS9601]
Length = 304
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 99/293 (33%), Gaps = 21/293 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQF 58
M+ + ++ A E + + D +++ + L S FP ++ ++A +
Sbjct: 1 MQRSSTWILKSLWGACERWSKSDCVDLSAAFAYYTLQSFFPILLISLSIASWFLGKQEGL 60
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS--- 115
+I + P + + + + ++ + A+ + + N +L+
Sbjct: 61 DQQIIAIAAQILPPSVVELVETTLFNLIDQGFGA-GILGAMFLLFTAGNAYLSLQRGSDR 119
Query: 116 ----------LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-----L 160
+N A+RV + + + ++ + + + L
Sbjct: 120 LWEDEIPSKKVNAAWRVQASKFLRNRVEAFLIVFFIGFLMVLDQISANLRMIPSNVLENL 179
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ L L ++ G+ ++ + + + LP+ K + +LPG I
Sbjct: 180 SKSNNLISDLLLKLPLLQVGQFAIPLIGFSLMALLLQALLPSRKVPLKPLLPGAFLIGIG 239
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ + I++ Y + + +++++LGV G + +
Sbjct: 240 LTTLNLAVSKSILSLGVRFQAYGFIGGFLVLTLWVWLLGVILYFGQCWSVVIA 292
>gi|160895707|ref|YP_001561289.1| ribonuclease BN [Delftia acidovorans SPH-1]
gi|160361291|gb|ABX32904.1| ribonuclease BN [Delftia acidovorans SPH-1]
Length = 331
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 96/268 (35%), Gaps = 10/268 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVF 67
+++A++ +++ DG M++ +S +LS+ P ++ L G+ +V +ID V
Sbjct: 30 LRAMWNAVQLWLDADGLRMSAAMSFYGILSLAPLLLLLVGLLGWWVDRSYVEHQLIDQVQ 89
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-----ALRISLNRAYRV 122
E A+ + + L ++ + GV AL
Sbjct: 90 DVIGERGAQVVRGALESAQRPDEGRLASLFGFILLMSGATGVFVELQSALEKLWTSNGEP 149
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP---ALGNLLLIIWN 179
++ + L + L + V +A+ A+ + + + L +I
Sbjct: 150 PPPKAVWWRMAALRLRGLTYVLALGFLLLVSMALSTAIQLITNWAGTKLQMQPLGPLISL 209
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + + + K ++ ++ G I + + +G Y+ T + S
Sbjct: 210 INECVSFGIAVLLFVGLMRIGSGPKPRLRYLIFGAIVGALLFTLGKQALAWYLSTAAVVS 269
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAE 267
Y S++ L+++Y +L A
Sbjct: 270 A-YGAAGSLVVLLMWIYFSSAILLLSAA 296
>gi|118618670|ref|YP_907002.1| hypothetical protein MUL_3347 [Mycobacterium ulcerans Agy99]
gi|118570780|gb|ABL05531.1| conserved membrane protein [Mycobacterium ulcerans Agy99]
Length = 324
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/275 (15%), Positives = 108/275 (39%), Gaps = 13/275 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLGAHQFVP 60
++ I + ++ ++ ++ + LS+ P + + A L G
Sbjct: 13 IWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAPLFGQDTLPAIEK 72
Query: 61 TVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
T+I + + P V+ + I I + A + ++ L + + S+ + + ++ A
Sbjct: 73 TIISMTHRFFSPSVVDEIIEPTIRDITANARGEVVSVGFLISLWAGSSAISSYVDAIVEA 132
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + ++ + +VI + V V P ++ ++ ++
Sbjct: 133 HDQTPLRHPVRQRFFALFLYVVGLLFIVISAPVAVMGPRKVSE-----HIPDSMSNLMHY 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A + L +G+I ++ ++ G + +++ + Y+ +
Sbjct: 188 GYYPALIAVLTVGVIILYRVSLPVPLPTHRLILGAVLAMAVFLIATLGLRFYLGWITHTG 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L++ + L+F + G ++GAELNA++
Sbjct: 248 YTYGALSTPIAFLLFAFFGGFAVMIGAELNAAIQE 282
>gi|254821654|ref|ZP_05226655.1| hypothetical protein MintA_17092 [Mycobacterium intracellulare ATCC
13950]
Length = 333
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 106/277 (38%), Gaps = 13/277 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSA-------LLSVFPFIVFGANLAGFLGAHQFVP 60
++ I A+ ++ ++ ++ + LL + + + A L G +
Sbjct: 13 IWRITLRALSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGTMAYVAPLFGPDMLPNILR 72
Query: 61 TVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + P V+ + I + + + + ++ + + + S+ + A S+ A
Sbjct: 73 QLLSTAHSVFSPSVVNEIIEPTVRDIASNARGEVVSLGFIISLWAGSSAISAFVDSVVEA 132
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + ++ V +V + + V P + L ++
Sbjct: 133 HDQTPLRHPVRQRFFALFLYVVMLVVVVATAPLVVVGPRKVEE-----HIPLGLSNVLRY 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A ++ L +G++ ++ ++ G + +V + Y+ ++
Sbjct: 188 GYYPALIIGLTLGVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYLRWITSTG 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L++ + L+F + G +LGAELNA++ +
Sbjct: 248 YTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEF 284
>gi|221069523|ref|ZP_03545628.1| ribonuclease BN [Comamonas testosteroni KF-1]
gi|220714546|gb|EED69914.1| ribonuclease BN [Comamonas testosteroni KF-1]
Length = 326
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 13/276 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ D+++ +++ DG M++ +S +LS+ P ++ L G+ +V T
Sbjct: 13 RRLTQPLQPLIDSVQLWLQADGLRMSAAMSFYGMLSLAPLLLAVVGLLGWWLDRSYVEST 72
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL----- 116
+I + E A+ + + L ++ L + GV +
Sbjct: 73 LISQIQSVVGERAAQVVKSALASAQNANQGSLASVLGLVMMLSGATGVFVELQASLDKLW 132
Query: 117 -----NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+R S I+RL YV+ L++ + AI + + +
Sbjct: 133 SMGEESRPQENKPWWSMAISRLWGLSYVVGLGFLLLVSMVLSTAIQMITKWANDELQLV- 191
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
L ++ + + + K +L G + + +G Y
Sbjct: 192 PLGPLMGLINEGLSFGIAVLLFWGLMRMGAGIKPSTRYLLLGSLTGAALFTIGKQALAWY 251
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAE 267
+ T + S Y S++ L++ Y + A
Sbjct: 252 LSTAAVVSA-YGAAGSLVVVLMWFYFTSAILLFSAA 286
>gi|168703991|ref|ZP_02736268.1| hypothetical protein GobsU_30944 [Gemmata obscuriglobus UQM 2246]
Length = 282
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/256 (11%), Positives = 78/256 (30%), Gaps = 6/256 (2%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQV 85
+++ ++ LS+ P ++ +AG G ++ A + I++
Sbjct: 1 LSAALAYYTTLSLSPLLLAVVAIAGLAYGPEAARGEIVAQFRDTIGVEAASFVEQLIIKS 60
Query: 86 LAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRS---WYITRLISFGYVLL 141
+ + ++ + +S ++ +LN ++V L
Sbjct: 61 SSKSDGIVAAIVAGGVLLFGASGVFSDMQSALNTIWKVPGHEVKGGILSIVKDRLLSFSL 120
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
++ V + + L + + + + +LP
Sbjct: 121 VCGAAFLLLTSLVVTAILAGINSRVAGWLPGMDALAQVVNFVFNFVLTAALFAMIFKWLP 180
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ G T + + +G L Y+ + + Y + + LV++Y +
Sbjct: 181 ETTLSWRDVGIGAAVTALLFSLGRYLIGLYLGK-AAVGSTYGAAGAFVVLLVWIYYSTMI 239
Query: 262 FILGAELNASMIIYYW 277
+ GAEL +
Sbjct: 240 LLFGAELTFVYAQRFG 255
>gi|291288185|ref|YP_003505001.1| cyclic nucleotide-binding protein [Denitrovibrio acetiphilus DSM
12809]
gi|290885345|gb|ADD69045.1| cyclic nucleotide-binding protein [Denitrovibrio acetiphilus DSM
12809]
Length = 425
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/266 (15%), Positives = 98/266 (36%), Gaps = 3/266 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPT 61
+YF F I A F + A+ + LLS+ P ++ + FL +
Sbjct: 15 KYFLDFFQKISLAYNFFNRNELRNHAAACAYYMLLSLIPLVLLLLYIFDTFLNRYPAFSD 74
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
I V + E I + ++ + + + S + +++ + + +
Sbjct: 75 DIFTVLSMFNEKITPEMFEKF-GISKAAGSAIGIFGIFNLLFSSRLILGSIQRAFSIIFP 133
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R++ + IS G + A + ++++ + Y+ L + +
Sbjct: 134 AEKKRNFLLENAISLGILPAAFILVLLIGVFNSTKDIIYKYLELNNINLEIIQPLFNAAA 193
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ F+ + F++ +LP K + L G + + + + + +T
Sbjct: 194 LILPASTGFVIVYFIYRYLPVRKPGTGNALKGALLFMVIFAGSRSVAVVVFKHIAG-NTA 252
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAE 267
Y L S++ L++ Y + + F+ A+
Sbjct: 253 YGLLGSLIIVLIWSYFVFLLFLFCAQ 278
>gi|124268665|ref|YP_001022669.1| ribonuclease BN family protein [Methylibium petroleiphilum PM1]
gi|124261440|gb|ABM96434.1| ribonuclease BN family protein [Methylibium petroleiphilum PM1]
Length = 306
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 95/283 (33%), Gaps = 6/283 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFV 59
M E F ++ A ++++ + A+ ++ + S+ P ++ + G + G
Sbjct: 1 MPELLRDWFAVVRSAARYWLDSQAFVYAAALAFFTVFSIAPVVIVAVAVIGLVLGEQAAQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAK-GLFTISALAAAYFSSNGVEALRISLNR 118
++ + A + + + ++ L+ SLN
Sbjct: 61 GQLMAQLEAVIGAQAAGFVQSAVAGARFERNGLWPTLLGFGLILLGATTVFAQLQKSLNA 120
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP---ALGNLLL 175
+ V S L+ VL +V L I + V++ L++A L
Sbjct: 121 IWSVAPSPSRNTLLLLVKTRVLSLTVVLAIGFVLLVSLLLSVAVRAVMVFAEAWLPVPAW 180
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ I ++ + + + LP + G T + +G L Y+
Sbjct: 181 TLGLLDIGLSLGVVTLLFAAMFRILPDVVLAWRDVWMGAAVTAGLFTIGRSLIALYLTHT 240
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+T S Y S++ LV++ + + GA + + R
Sbjct: 241 ATGSA-YGAAGSLVLLLVWVNYSSLILLFGAAFTRAHLEARGR 282
>gi|257460362|ref|ZP_05625463.1| ribonuclease BN [Campylobacter gracilis RM3268]
gi|257441693|gb|EEV16835.1| ribonuclease BN [Campylobacter gracilis RM3268]
Length = 277
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 90/264 (34%), Gaps = 12/264 (4%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEVI 74
+ + AS +S +L++ P ++ ++ L + + + ++ +F +
Sbjct: 18 FFRLYDTELMHHASSLSFHTILALLPVLMVSLSVFMQLPSFKGYYDKIMGFIFSNFLPAN 77
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I + +A L A S + R E RS++ +
Sbjct: 78 QASMAHYIEEFMANG-LSLGVTGFCAVLVTSVLFFGDFEAIIARISHSPE-RSFFKSLST 135
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + LA V L ++ + L N L ++
Sbjct: 136 YWTLMTLAPVGLGASFYISGELQELLN---------KTEFTSWINLLKILPYLIVWGIFA 186
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ + + ++L + I W + ++F Y+ TY ++Y + + ++
Sbjct: 187 ITYATAINREIRAKAVLASSLVASILWWLSRLVFAQYVFYNKTYLSIYGSFSVALFFFLW 246
Query: 255 LYMLGVFFILGAELNASMIIYYWR 278
+Y+ +F++ G + + + R
Sbjct: 247 IYISWIFYLYGVKFCVFLDAKFKR 270
>gi|241895345|ref|ZP_04782641.1| conserved hypothetical protein [Weissella paramesenteroides ATCC
33313]
gi|241871319|gb|EER75070.1| conserved hypothetical protein [Weissella paramesenteroides ATCC
33313]
Length = 320
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 8/255 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + I+ ALLS+ P ++ +A G + +I ++ P I +
Sbjct: 30 FKRGNLKMVGPTITYYALLSMVPILMSVGAVASLAGMNA--SELITLLSEQLPSNIMSIL 87
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
I VL G+ + S L + +S+ + +R S N Y V E S +TR+ SF +
Sbjct: 88 APIIQSVL-KGGVGILSFSILTTIWAASSVLAIIRKSFNAVYDVPERVSGLLTRVFSFLW 146
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+++ + S V V + A+ L I R T+ L++ + +
Sbjct: 147 LMVILI-----SAVVVMLVSAILPAIIAAIPGIGWLEFITKQRWIITLAGLWVMMCVFNA 201
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
LPA + + ++ G I ++ F Y Y L S++ +V+L ++
Sbjct: 202 ALPAKRIALKPLIIGSGVEVILMIILNYSFGWYAKFTVKNVGFYQSLGSLLVLIVYLNLI 261
Query: 259 GVFFILGAELNASMI 273
G ++G L A +
Sbjct: 262 GTIMVIGQILIAWLE 276
>gi|41407780|ref|NP_960616.1| hypothetical protein MAP1682c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396134|gb|AAS03999.1| hypothetical protein MAP_1682c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 340
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 98/273 (35%), Gaps = 18/273 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+I + + ++ G +A+ I+ AL+S+FP ++ G + G V+
Sbjct: 17 VIVGVVYKYNDDQGGYLAALITYYALVSLFPLLLLLTTGLGVILAGRPDLQAQVLHSTLS 76
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P I ++ + I A Y +A++ +++ A+ V + +
Sbjct: 77 EFP-----VIGSQLHHPEGLSGGAAGVIVGLAGALYGGLGVGQAVQNAMDSAWAVPKHKR 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + + +++ V + +A + A L + G A++
Sbjct: 132 PNP---------IRSRLRSLLLLLVLGSAAIAATLLAAAGQATAGLGFLGKAGLALASVA 182
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY-STMYAGLA 246
+ + + A + PG + + W + Y+ S + A
Sbjct: 183 INALICLVLFRLTTARALSYRQVWPGAVAAALVWQLLQWFGAGYVAHVVKRASATNSVFA 242
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L FL++ ++ AE+N ++ + +
Sbjct: 243 LVLGALAFLFLASTVLVVCAEVNVVLVERLYPR 275
>gi|206890928|ref|YP_002249079.1| YihY family protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742866|gb|ACI21923.1| YihY family protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 265
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/259 (21%), Positives = 119/259 (45%), Gaps = 7/259 (2%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
++ F ++G ++S ++ ++LS+ P +F N+ + + V + + I
Sbjct: 13 LKDFYNDEGVFLSSSLAFFSILSIIPLSMFIVNILMNILQEERVVKFVYSKLITFFPAIE 72
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ E+ ++LA +K + +IS + FS A+ SLN+ ++ + R + ++ L+S
Sbjct: 73 LHMIKELRKILA--SKEISSISLILYGVFSLQLFTAIEFSLNKIFKTAKKRHFIMSLLMS 130
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
F +LL + T+ L + + +L+ + + + +F+
Sbjct: 131 FFIILLITFTVAASFAFT-----YLIRIFQPMIFSELSILLGFFLKYLLPFVLMFVITTL 185
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ LP K K+ SIL G + T + + +F Y+V +T+Y L++ + L++L
Sbjct: 186 LYKILPNKKIKLSSILIGALITTVLIEIAKYVFAFYVVKIIKINTLYGSLSTFLALLMWL 245
Query: 256 YMLGVFFILGAELNASMII 274
+ FI GAEL ++
Sbjct: 246 FYGWAVFIYGAELIKNIEK 264
>gi|331006336|ref|ZP_08329649.1| Ribonuclease BN [gamma proteobacterium IMCC1989]
gi|330419857|gb|EGG94210.1| Ribonuclease BN [gamma proteobacterium IMCC1989]
Length = 219
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/215 (13%), Positives = 71/215 (33%), Gaps = 7/215 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-P 60
R VFD + F+++ A+ ++ L ++ P + ++ + A V
Sbjct: 11 RYITREVFDFARNLGREFIDKGCQKNAAALTYMTLFALVPLLTVTYSMFSVIPAFSGVGD 70
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ V+F + + + + + A+ L I + + + + N +
Sbjct: 71 QLQGVIFDNFVPETGEEVKGYLSDF-SNQARNLTGIGVGMLVVTAYLMLTNIEKAFNGIW 129
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + R + L+ + + L L V + V+++ + L +
Sbjct: 130 GVKQARKGLSSFLLYWAVLSLGPFLLGAGLLVSTYLLSLRLVVQEY-----DQLGVTPLL 184
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+L + + +P + + L G
Sbjct: 185 FQIIPLLMTTMAFTLLFAAVPNCRVPMRYALFGGF 219
>gi|309790243|ref|ZP_07684813.1| ribonuclease BN [Oscillochloris trichoides DG6]
gi|308227707|gb|EFO81365.1| ribonuclease BN [Oscillochloris trichoides DG6]
Length = 262
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/257 (12%), Positives = 84/257 (32%), Gaps = 9/257 (3%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
++ + ++ AL S+FP I+ ++ G + Q ++ E + IT +
Sbjct: 1 MSLGASLAYYALFSLFPLILVILSIVGAVLDPQQFAVQQRILSLIGSEQVRGLITQTLQN 60
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITRLISFGY 138
+ + G I + +S AL + + + +
Sbjct: 61 L-NSSSVGAGLIGFITLLMGASGIFGALEKAFAAIWETGAEESAGGILQTILKAVQQKLL 119
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ + + + + + + K L L + ++ L + +
Sbjct: 120 AFGLVLGSAFLMLLSIISTVLVTALSKLTTTLPGQALFWQVVQFSLSLALLSLAFATIFK 179
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
F+P K + + + + + + Y+ + Y + S+M + ++Y+
Sbjct: 180 FIPRCKVLWRDVWLAALISALLFTGLQKVVGIYLGQAN--YASYGVVGSVMALMFWIYLS 237
Query: 259 GVFFILGAELNASMIIY 275
+ +LG L+ +
Sbjct: 238 SLVILLGGVLSFVYARH 254
>gi|294631035|ref|ZP_06709595.1| integral membrane protein [Streptomyces sp. e14]
gi|292834368|gb|EFF92717.1| integral membrane protein [Streptomyces sp. e14]
Length = 319
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 92/269 (34%), Gaps = 8/269 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ + + E +A+ ++ + +++FP + A + + T+
Sbjct: 28 RLMLTHAWRSYERLDRVKWTRLAAAMTFVSFVALFPLLTVAAAVGAATLSGAQQRTLEGK 87
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ +P + + + A A + I+ N V +R L + + +
Sbjct: 88 IAQQFPGLGNELDIASL----AQNAGTVGIIAGAVLLLTGVNWVGQVRDCLRAVWELADP 143
Query: 126 RSWYIT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
I RL G ++ +++ A+ +V + + +
Sbjct: 144 DENPILARLKDAGVLVGLGGAVLVTFAASAVASAAVGWVSRQIGLDEHGWGSVVLRVAAF 203
Query: 185 TMLAL--FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ L F+ L++V LP + +L + + + + +L + YI + + MY
Sbjct: 204 VVAVLADFLVLLYVLTLLPGVEPPRRRLLVAALVGAVGFELLKLLLSGYIQGVAAKN-MY 262
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ L+++ + A A+
Sbjct: 263 GAFGVPVALLLWINFTCKLVLYCAAWTAT 291
>gi|296156021|ref|ZP_06838860.1| ribonuclease BN [Burkholderia sp. Ch1-1]
gi|295893527|gb|EFG73306.1| ribonuclease BN [Burkholderia sp. Ch1-1]
Length = 300
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/268 (15%), Positives = 92/268 (34%), Gaps = 4/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ ++ F G +A ++ ALLS+ P ++ + + + +
Sbjct: 19 FVLQTLKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRVVPQHVLLAALAHLLQWL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + E+ L + + L +FSS L +++ + +
Sbjct: 79 VPGQSNALVRELANFL-AHRAVIGWVLLLTMIFFSSLAFTVLENAMSLIFVHRVVVRRRH 137
Query: 131 TRLISFG---YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L + Y+L V L+I++FV + A F +L + +
Sbjct: 138 FLLSAMLPYCYILFLGVGLLIVTFVSSGLEAIGAEGIDLFGLHVSLQGLSRAVLYLLGLA 197
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L +++ +P + + L G + + W + + Y T S S +Y L
Sbjct: 198 GEIFVLTSIYMVMPVGRPSLKHALFGGVVAAVLWEITRHVLVWYFATLSQVSVVYGSLTM 257
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L L L + GA++ + +
Sbjct: 258 AIVILFSLEWLATLLLFGAQVISQYERF 285
>gi|76800751|ref|YP_325759.1| hypothetical protein NP0192A [Natronomonas pharaonis DSM 2160]
gi|76556616|emb|CAI48187.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
Length = 435
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/281 (17%), Positives = 93/281 (33%), Gaps = 12/281 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ + + ++ + +A+ ++ L+S+ P +V A +G Q +
Sbjct: 1 MKRHVDRTVAVTRGVVDGARSDRITFLAASLAYYGLVSLVPLLVLALVAASVVGEGQLIE 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
++ V A E + D + A G + + L I+ + Y
Sbjct: 61 ALVVAVGDALGEQAGDVLGDALTG--AAGRGGATLLGLAVFLWSGLKLFRGLDIAFSEVY 118
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
S + +V + + V +A + + G
Sbjct: 119 GTAGP--------ESLLSGIRNAVVTLGAVGLGVTATVAAGAAIAVLGVDAAVEGVALVG 170
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +AL + + ++ FLP + +PG F I W F Y Y
Sbjct: 171 TLGL-FVALTVAFLPLYYFLPGTDVSLSEAVPGAAFAAIGWTALQTGFRIYAGATDAY-A 228
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
Y L ++ + FLY+ + +LGA LNA + P
Sbjct: 229 AYGILGGVLLLVTFLYLGALVLLLGAVLNAVLAGRSPPSDP 269
>gi|269126031|ref|YP_003299401.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
gi|268310989|gb|ACY97363.1| ribonuclease BN [Thermomonospora curvata DSM 43183]
Length = 300
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/276 (17%), Positives = 103/276 (37%), Gaps = 14/276 (5%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
I + ++ +A+ + ALLS+ P ++ + G L TV D+
Sbjct: 14 IAWRLVKGTAVAGFRHRVTGLAAEAAFFALLSLPPLVIGLISTMGHLRGALAGETVADIR 73
Query: 67 FGAW--------PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ +T I +V+ L ++S L + + S ++
Sbjct: 74 AWLIRQAHKILAGPAVDDVVTPLIDEVIRGGGVDLISVSFLLSLWAGSRATNVYVDTITI 133
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY + +R TRL +F L+ V++ + VA P + L +
Sbjct: 134 AYGLSGLRGVIRTRLRAFTLYLIGLAVAVVVIPLLVAGPALVRQA------LPVGEAFVR 187
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+ + L ++ ++ + +PG + W++G+V Y+ +
Sbjct: 188 LLYWPVVVTLSIMFLATLYHMSVPVRTSWLRTVPGAVLALAIWILGSVALRVYLAGSLSG 247
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+++ L + + + +LY+ + ++GA LNA +
Sbjct: 248 VSVHGSLGAPIAVMAWLYVTALAVLIGAMLNAEIDR 283
>gi|330719410|ref|ZP_08314010.1| ribonuclease BN-like family protein [Leuconostoc fallax KCTC 3537]
Length = 283
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/262 (18%), Positives = 102/262 (38%), Gaps = 5/262 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + + LL+ FP ++ A + F V +ID + P I+K +
Sbjct: 25 WQRSQISYVGPTFAYYVLLTAFPILIGVAMMLSFTNIDNTV--LIDNLRNILPPNISKIL 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ +L + LF+I+ + A + S + R + N V E S +TR SF +
Sbjct: 83 LPILTSILNNRSVSLFSITIILAIWSISRVIAIFRKAFNAIAGVEEKISSLLTRAFSFIW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L+ + + V + L + A L W + + ++ + + +
Sbjct: 143 LLVIILLFGVFLIVGNVSVVVLQNFPAWSFADTILAQSQWIVSLGSWLMLVLLNFLLPTK 202
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
A++K+ +L G + FT Y Y ++SI+ L++L ++
Sbjct: 203 ---EARTKLRYVLVGSFIEVGLLTLLNKGFTFYAKFALGRYDFYQSISSIIVVLIWLNLI 259
Query: 259 GVFFILGAELNASMIIYYWRKK 280
+ G + + ++WR+K
Sbjct: 260 ASILVAGYVIIHWLSEFHWREK 281
>gi|227497374|ref|ZP_03927606.1| membrane protein ribonuclease BN family protein [Actinomyces
urogenitalis DSM 15434]
gi|226833245|gb|EEH65628.1| membrane protein ribonuclease BN family protein [Actinomyces
urogenitalis DSM 15434]
Length = 411
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 94/265 (35%), Gaps = 9/265 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ + + G +A I+ + L SVF + G ++ Q V+
Sbjct: 47 WWNRSRLGRMLARYGNVRGGLLAGGIAYTGLFSVFAGLAIGVSVLMATIGRHPQIRDAVL 106
Query: 64 DVVFGAWPEVIAKPITDEILQVL----AVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
D + P V+ ++ + + L Y + + AL+ +
Sbjct: 107 DSIGSLLPGVVDDGSGGGLVSIDQLTLDSALNLGSVLGLLTMLYSAMGLMGALKNGVRAM 166
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +V + + ++ L + V+ + + + A+A F P+ + +
Sbjct: 167 FGIVTLPHNPVVNQLANLAGFLVIMVAVLATAMASVLTSAVAGAMDFLPSWLSGPGV--K 224
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A + G++ + + L + ++ G +++ + T + + S+ +
Sbjct: 225 AATLALSFLIDAGVLALIIRLSGPRVPRRDLVAGAAIGALAFGALRQVGTSAVGSVSS-N 283
Query: 240 TMYAGLASIMTCLVFLYMLGVFFIL 264
M A A+++ +++L++ +
Sbjct: 284 PMLASFAALVVLILWLHLASRVVLY 308
>gi|41408921|ref|NP_961757.1| hypothetical protein MAP2823 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254776040|ref|ZP_05217556.1| hypothetical protein MaviaA2_15410 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41397280|gb|AAS05140.1| hypothetical protein MAP_2823 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 333
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 104/277 (37%), Gaps = 13/277 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN----LAGFLGAHQFVPTVI 63
++ I + ++ ++ ++ + LS+ P ++ +A G +
Sbjct: 13 IWRITLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGLLGTLAYVAPLFGPDMLPSILR 72
Query: 64 DVVFGAW----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ A P V+ + I + + + ++ L + + S+ + A S+ A
Sbjct: 73 QLISTAHSVFSPSVVNEIIEPTVRDIANNARGEVVSLGFLISLWAGSSAISAFVDSVVEA 132
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + ++ V +V + + V P + L ++
Sbjct: 133 HDQTPLRHPVRQRFFALFLYVVMLVGVVATAPLVVVGPRKVGE-----HIPLGLSNVLRY 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A ++ L I ++ ++ ++ G + +V + Y+ ++
Sbjct: 188 GYYPALIVGLTIAVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYLRWITSTG 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L++ + L+F + G +LGAELNA++ +
Sbjct: 248 YTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEF 284
>gi|145224526|ref|YP_001135204.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|315444857|ref|YP_004077736.1| hypothetical protein Mspyr1_32900 [Mycobacterium sp. Spyr1]
gi|145217012|gb|ABP46416.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|315263160|gb|ADT99901.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length = 323
Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/275 (14%), Positives = 101/275 (36%), Gaps = 13/275 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVF----GANLAGFLGAHQFVPTVI 63
+ I+ + ++ +A ++ + LS+ P ++ A +A G +
Sbjct: 23 IRHIVARTLGKSWDDSIFAESAQAAFWCALSLPPLLLGMLGSLAYVAPLFGPDTLLTIEN 82
Query: 64 DVVF----GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ P V+ + I + ++ + ++ + + + S+ + A S+ A
Sbjct: 83 QLISLAGKFFSPNVVGEIIEPTVRDIVNGARGEVVSLGFVISLWAGSSAISAFVDSITEA 142
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + G ++ + ++ + P +A + +
Sbjct: 143 HGQTALRHPVRQRFYALGLYVVMLIGAIVTAPFLALGPRKVAEF-----IPDSWDDALRF 197
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+AL + + ++ +L G + ++V Y+ ++
Sbjct: 198 AYFPVLFVALAVAVNVLYRVSLPKPLPTHRLLTGSLLAAGVFLVATWGLRVYLTWITSTG 257
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y LA+ + L+F + LG ++GAELNA++
Sbjct: 258 YTYGALATPIAFLLFAFFLGFAIMIGAELNAAIEE 292
>gi|318040575|ref|ZP_07972531.1| serum resistance locus BrkB-like protein [Synechococcus sp. CB0101]
Length = 312
Score = 83.9 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/299 (13%), Positives = 104/299 (34%), Gaps = 21/299 (7%)
Query: 1 MREYFCI--VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAH 56
MR V + + + + ED +++ + L S+FP ++ +A + A
Sbjct: 1 MRRSGWWRSVVRLCWRSYRLWDREDCVDLSAAFAYHTLQSIFPILLIALGVASRVLGSAD 60
Query: 57 QFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
++++ P + I + Q++ G + A S+N +L+
Sbjct: 61 NVSDQLLELADQVLPASVIPVIRSTLNQLI-RQGTGAGLVGAGFLLVSSTNAYLSLQRGA 119
Query: 117 NRAYRVVE---MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+R + + + F L ++ LV + FV + +R P L
Sbjct: 120 DRLWGFRPCLLPIDHWTRPVWRFIRARLEAIALVTLIGFFVVLDQLTTNLRLLSPGSWRL 179
Query: 174 LLIIWNGRIY-------------ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+L W ++L + LP + S++PG + +
Sbjct: 180 MLQSWLPSWLHLWAPVPMAVDFGLSLLIACSLAFALLAILPTRHVPVRSLIPGSMLIGLV 239
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ V+ +++ + Y + ++ ++++++G+ G ++ + +
Sbjct: 240 LTIFNVVLGRSLLSLGSRFQAYGVIGGVLLLSLWVWLVGLVVYFGTAVSVVVSRRREGE 298
>gi|170017722|ref|YP_001728641.1| hypothetical protein LCK_01373 [Leuconostoc citreum KM20]
gi|169804579|gb|ACA83197.1| Predicted membrane protein [Leuconostoc citreum KM20]
Length = 292
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 11/272 (4%)
Query: 1 MREYFCIVFDIIYDAIEH--FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++ F I++ + A+ F + + ALL++FP I+ L +Q
Sbjct: 5 MKKQFDIIYKRYHLAVLKDLFDRAQIGYVGPTFAYYALLTIFPTIMSVVMLISITNVNQ- 63
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+I VV P+ I + + VL+ L + S + S + R+S NR
Sbjct: 64 -KDMIAVVSSILPQNIQAIVLPILRSVLSSTHLTLLSFSVPFTLWTVSQVLAVFRMSFNR 122
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
V E S +TR+ SF ++LL ++ + + + Y+ + II
Sbjct: 123 IADVEEHISGLLTRVWSFLWLLLIIAAFGVLMIGSNILAIVVRYIPG-----SQVQNIII 177
Query: 179 NGRIYATMLALFIGLIFVHLFLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+G + L +F+ L+ ++ FLP ++ I + G I + V FT Y
Sbjct: 178 SGSKWFIWLGMFLLLVMLNYFLPTKMGRAPIKWVALGSFIELIMLNLLNVGFTWYAQVGI 237
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
Y + SI+ L++L ++G +LG L
Sbjct: 238 KQYNFYQSIGSIIVLLIWLNLIGTILVLGYVL 269
>gi|119899352|ref|YP_934565.1| exoribonuclease II [Azoarcus sp. BH72]
gi|119671765|emb|CAL95679.1| exoribonuclease II [Azoarcus sp. BH72]
Length = 314
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 93/283 (32%), Gaps = 6/283 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M+ + + +++ + A+ ++ + SV P ++ ++ G LG
Sbjct: 1 MKTALRYWSGVAKTTVRLWLDAQVFVHAAALAFFTVFSVAPVVIVVVSIVGTVLGERAAQ 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
+ + + A + + + L A +++ ++ +LN
Sbjct: 61 GEIAEQLQSVIGAEAAAAVQTAVEGSRIERSGILPTLAGIGALLLGATSVFGQMQTALNA 120
Query: 119 AYRVVEMRSWYITRL---ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+ V + L + + ++ + A V L
Sbjct: 121 IWGVAPKPTRSSVWLLIKARLLSLTVVLAIGFVLLVSLLLSVAVQAVVTFAQDWLPIPGG 180
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ +++ + + + LP +L G T + + +G L Y+ T
Sbjct: 181 LLVGLDSVVSLVVVTLLFATIFRVLPDVVLGWRDVLLGAFATALLFSLGRGLIATYLSTT 240
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+T ++ Y S++ L+++ + + GA + + R
Sbjct: 241 AT-ASTYGAAGSLVLLLMWVNYSSLILLFGAAFTRAHVEARGR 282
>gi|92119385|ref|YP_579114.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
gi|91802279|gb|ABE64654.1| ribonuclease BN, putative [Nitrobacter hamburgensis X14]
Length = 301
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 103/281 (36%), Gaps = 6/281 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFG-ANLAGFLGAHQFVP 60
R+ F I+ F G +A ++ LLS+ P ++ L+ + + +
Sbjct: 9 RKIFKQPGAFALAVIKQFRANQGVLLAGAVAYYTLLSLVPLLILILMALSHIVPEDRLLS 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
T+ + + P A + + + + + I + +FS+ L +++ +
Sbjct: 69 TLSEYLEFVVPGQSAALVQEV--RTFLAQKQVVGGILFVTMLFFSALAFTILENAMSVIF 126
Query: 121 RVV---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ R + ++ ++ + ++L + L+I++ + +L I
Sbjct: 127 YHRVKIKRRHFLVSAVMPYLFILFLGIGLLIVTVLSGVFQFLGTRSIVLLGQTRSLDQIS 186
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
++ + + ++ +P + + + G + + W + + Y T S
Sbjct: 187 MFFLYVIGVIGEMLLITAIYFVMPVGRLSLRHAMIGGVMAALLWELTRHILAWYYTTMSQ 246
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y L + + L+ + + + ++GA++ A
Sbjct: 247 IQLVYGSLTTAIAVLLSVEIGALILLIGAQVIAEYERVSRE 287
>gi|118465303|ref|YP_881928.1| hypothetical protein MAV_2739 [Mycobacterium avium 104]
gi|118166590|gb|ABK67487.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 324
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 95/272 (34%), Gaps = 18/272 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGA 69
I + + ++ G +A+ I+ AL+S+FP ++ G + G V+
Sbjct: 2 IVGVVYKYNDDQGGYLAALITYYALVSLFPLLLLLTTGLGVILAGRPDLQAQVLHSTLSE 61
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P I ++ + I A Y +A++ +++ + V + +
Sbjct: 62 FP-----VIGSQLHHPEGLSGGAAGVIVGLAGALYGGLGVGQAVQNAMDSVWAVPKHKRP 116
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + V +++ V + +A + A L + G ++
Sbjct: 117 NP---------IRSRVRSLLLLLVLGSAAIAATLLAAAGQATAGLGFLGKAGLALTSVAI 167
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY-STMYAGLAS 247
+ + + A + PG + + W + Y+ S + A
Sbjct: 168 NALICLVLFRLTTARALSYRQVWPGAVAAALVWQLLQWFGAGYVAHVVKRASATNSVFAL 227
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L FL++ ++ AE+N ++ + +
Sbjct: 228 VLGALAFLFLASTVLVVCAEVNVVLVERLYPR 259
>gi|72162286|ref|YP_289943.1| hypothetical protein Tfu_1887 [Thermobifida fusca YX]
gi|71916018|gb|AAZ55920.1| similar to membrane protein [Thermobifida fusca YX]
Length = 433
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 81/203 (39%), Gaps = 6/203 (2%)
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + + + L G+ +++ L + + S + ++ AY + MR +
Sbjct: 156 EAVQTTVEPLVDDFLGGAHGGVLSLTFLVSLWSGSRAMSVFIEAITIAYGLEGMRGYLRR 215
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
RL++F L A + +++ VA P AL + L + G L
Sbjct: 216 RLLAFVAYLGALLFALVVLPAVVAGPDALRAL------LPAADTYLHLGYWPLVGLLSLG 269
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
++ ++ ++ ++ LPG I + + G V Y+ +Y L + +
Sbjct: 270 SIVALYTLSVPVRTSLVRQLPGAIAAVLILLCGTVGLRLYLEASFGQVNLYGPLTAPIII 329
Query: 252 LVFLYMLGVFFILGAELNASMII 274
+++LY+ + + G+ LNA +
Sbjct: 330 VIWLYLTALAVLAGSSLNAEIDA 352
>gi|118462877|ref|YP_882777.1| hypothetical protein MAV_3600 [Mycobacterium avium 104]
gi|118164164|gb|ABK65061.1| conserved hypothetical protein [Mycobacterium avium 104]
Length = 333
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 104/277 (37%), Gaps = 13/277 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN----LAGFLGAHQFVPTVI 63
++ I + ++ ++ ++ + LS+ P ++ +A G +
Sbjct: 13 IWRITLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGLLGTLAYVAPLFGPDMLPSILR 72
Query: 64 DVVFGAW----PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ A P V+ + I + + + ++ L + + S+ + A S+ A
Sbjct: 73 QLISTAHSVFSPSVVNEIIEPTVRDIANNARGEVVSLGFLISLWAGSSAISAFVDSVVEA 132
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + ++ V +V + + V P + L ++
Sbjct: 133 HDQTPLRHPVRQRFFALFLYVVMLVGVVATAPLVVVGPRKVGE-----HIPLGLSNVLRY 187
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A ++ L I ++ ++ ++ G + +V + Y+ ++
Sbjct: 188 GYYPALIVGLTIAVMILYRVALPEPLPSHRLILGAMLATTVFVTATLGLRFYLRWITSTG 247
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y L++ + L+F + G +LGAELNA++ +
Sbjct: 248 YTYGALSTPIAFLLFAFFGGFAIMLGAELNAAVQEEF 284
>gi|256372749|ref|YP_003110573.1| ribonuclease BN [Acidimicrobium ferrooxidans DSM 10331]
gi|256009333|gb|ACU54900.1| ribonuclease BN [Acidimicrobium ferrooxidans DSM 10331]
Length = 350
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 87/276 (31%), Gaps = 13/276 (4%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVID 64
+ I + + F E++ A ++ S+ P ++ +A + V V
Sbjct: 19 KLLAIAFAIVRKFGEDNASTWALLVAYYGFASLVPLLLVAVTVASIVFAHHPNLVHDVAH 78
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ P + A+ + + LA + + + + A + ++ + V
Sbjct: 79 SAIASIPVLGAQFASRVRVHALASHSIIGLVVGIAGLIWGAQGVASAAQNAMANVWNVP- 137
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ F L ++ ++ + + +A + + ++I + A
Sbjct: 138 -----LVDRPGFLPRTLRNLGILAVLGLGALATSVIAALATGLGHTAVITVVIVVATVAA 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYA 243
+G + ++ G I + W + + + + S Y
Sbjct: 193 NAGLYVLGFRLLTPAA----IATGDLVTGAIVASVVWSILQQIGGVLVTHDLAHASATYG 248
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + + + + AELN ++ W +
Sbjct: 249 VFGIVLGLIAWFSIATEATLYAAELNVVLVRRLWPR 284
>gi|108799147|ref|YP_639344.1| ribonuclease BN [Mycobacterium sp. MCS]
gi|119868262|ref|YP_938214.1| ribonuclease BN [Mycobacterium sp. KMS]
gi|126434755|ref|YP_001070446.1| ribonuclease BN [Mycobacterium sp. JLS]
gi|108769566|gb|ABG08288.1| ribonuclease BN [Mycobacterium sp. MCS]
gi|119694351|gb|ABL91424.1| ribonuclease BN [Mycobacterium sp. KMS]
gi|126234555|gb|ABN97955.1| ribonuclease BN [Mycobacterium sp. JLS]
Length = 321
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 102/276 (36%), Gaps = 13/276 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLGAHQFVP 60
V + + ++ ++ ++ + LS+ P + + A L G
Sbjct: 15 VRRTLVRTLSKSWDDSIFSESAQAAFWCALSLPPLLLGMLGSLAYIAPLFGPDVLPTIEN 74
Query: 61 TVIDVVFGAWPEVIA-KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + + + I + ++ + ++ + + + S+ + A S+ A
Sbjct: 75 QLIRTANSFFSSNVVNEIIAPTVSDIVKGARGEVVSLGFVISLWAGSSAISAFVDSIVEA 134
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + G ++ V V + + P +A + ++
Sbjct: 135 HDQTPLRHPVRQRFYALGLYVVMLVFAVGTAPLLALGPRKVAAL-----IPDEWDAVLRF 189
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A L+L + + ++ ++ G I + ++V + Y+ ++
Sbjct: 190 GYWPALFLSLLVAVNILYRVSLPKPLPSHRLILGSILATVVFLVTTLGLRVYLTWITSTG 249
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
Y LA+ + L+F + LG ++GAELNA++
Sbjct: 250 YTYGALATPIAFLLFAFFLGFAIMIGAELNAAVEEQ 285
>gi|325972595|ref|YP_004248786.1| ribonuclease BN [Spirochaeta sp. Buddy]
gi|324027833|gb|ADY14592.1| ribonuclease BN [Spirochaeta sp. Buddy]
Length = 413
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 88/270 (32%), Gaps = 5/270 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + +++D AS + S LL++ P + F LG + +
Sbjct: 8 QQNLKRLGKFFSIVFRQAMKDDILNAASGLVYSTLLAIVPALTFMFTFFKALGVLEPLTD 67
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ G A +L A L + ++ + + ++NR YR
Sbjct: 68 FLSQWLGELAGSQAGGELMLLLDRYTRNATSLGVVGLVSFLITMVLLINKVWSAINRIYR 127
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R+ ++++AS+ L V + + ++ R
Sbjct: 128 SSRSRNPLKRFAGYVTFLIIASLLLAAYVSVQSVMASWYLDL-----LGVSIGRWSSVLR 182
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
A L + I L + F+P K + + G + + + + T + +S +
Sbjct: 183 TLAPSLIVAIILFLLIYFVPNTKVRFDAAFLGSLAGVVFIGIFSKFTTILTAMATNFSVI 242
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y A++ L F Y+ EL
Sbjct: 243 YGSFAAVFLFLFFCYVFWATVFFSVELAYV 272
>gi|225619115|ref|YP_002720341.1| ribonuclease BN [Brachyspira hyodysenteriae WA1]
gi|225213934|gb|ACN82668.1| Ribonuclease BN, Ribonuclease BN-like family [Brachyspira
hyodysenteriae WA1]
Length = 552
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 75/224 (33%), Gaps = 12/224 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ II A+ F ++D A+ ++ LS P ++ G + +Q + I
Sbjct: 4 YRIIVFAVTDFFKDDCTIRAAALTYLVTLSFIPTLIVGLFILRIFNIYQNIFVFIFDWME 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + I ++ + + +++ SL + +RV S
Sbjct: 64 KNAPFYEPMVRQILNIADNTDLASFGIIGIISTVVSVALILHSIQRSLIKIWRVKIKTSI 123
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L + + I + ++L + LI +++
Sbjct: 124 PRVAANYIALLFLIPILIGISFTLITYTSISLHSLP---------ALIKILLSWVTPIIS 174
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ ++F+++ +P K + + ++ + LF+ Y
Sbjct: 175 TSLLVLFLYVLVPQTKVNWSNATISSVLVAMAII---TLFSVYF 215
>gi|296128867|ref|YP_003636117.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
gi|296020682|gb|ADG73918.1| ribonuclease BN [Cellulomonas flavigena DSM 20109]
Length = 344
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/271 (12%), Positives = 90/271 (33%), Gaps = 6/271 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ A F + G + I+ ++L SVF + G + + TV+
Sbjct: 56 WWQATRVARANARFGQAGGGLLTGGIAYTSLFSVFAGLTIGYTAFMAVLGNNAELRETVL 115
Query: 64 DVVFGAWPE----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ A P + + V+ ++ + + + ALR ++
Sbjct: 116 LTISEALPGIIDTGDGTGLLEPDELVMTAGLSVAGVVAFGVLLFSAISATSALRTAVRAM 175
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + + +L G + ++ +++ + + + + A ++ +++
Sbjct: 176 FGAHDAVTIVAGKLRELGGFVGIALAVLLSAVLGIVVTTAADWLLGALGISDGSGVVLRV 235
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
I + + + V L +L G V VL T + +
Sbjct: 236 VGIVVAFVVDALVFVMVVRVLAGQAPPRRDLLHGAGIAAAGLGVVRVLGTSVVAGSVQAN 295
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ A A ++ L+++ ++ +L A A
Sbjct: 296 PVLASFALVVVLLLWINLIARIVLLAAAWTA 326
>gi|120608926|ref|YP_968604.1| ribonuclease BN [Acidovorax citrulli AAC00-1]
gi|120587390|gb|ABM30830.1| ribonuclease BN [Acidovorax citrulli AAC00-1]
Length = 334
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 42/278 (15%), Positives = 93/278 (33%), Gaps = 13/278 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAW 70
+ A+ +++ DG M++ +S +LS+ P ++ + G+ ++ T +I V
Sbjct: 29 LVRAVNLWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDKSYLETNLIAQVQSVM 88
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEMRSWY 129
E A+ + + L +I+ ++ L+ +L R + +
Sbjct: 89 GERGAEVVKLALSSAREPSEGRLASIAGFVLLLSGATGVFVELQSALERLWTSGHPPATD 148
Query: 130 ITRLIS--------FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
YVL L+I V AI + + P ++
Sbjct: 149 NKAWWRMASLRLRGLAYVLAIGFLLLISLVVSTAIHVVANWASARLPFASG--PLLQLVN 206
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ + + K + ++ G + I + VG L Y+ T + S
Sbjct: 207 ELVAFGIAVLLFVGLMRIGTGPKPPMACLVFGAVVGAILFTVGKQLLALYLATAAVVSA- 265
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y S++ L+++Y + A ++
Sbjct: 266 YGAAGSLVVLLMWIYFSSAVLLFSASCARALQEARAEH 303
>gi|291277438|ref|YP_003517210.1| putative ribonuclease BN [Helicobacter mustelae 12198]
gi|290964632|emb|CBG40486.1| putative ribonuclease BN [Helicobacter mustelae 12198]
Length = 277
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/266 (9%), Positives = 82/266 (30%), Gaps = 13/266 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFV-EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV 59
MR + + + E++ + A+ +S + ++ P + ++ L + Q+
Sbjct: 1 MRRFTQKIQKNLSMVYNFLTHEQEIFYYAASLSFYTIFAIIPLLFIIFSILSHLPSFQYR 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ V ++ I I + +L + A + + + + S +R
Sbjct: 61 LEDVRNVIFSYIIPIDSDILNNMLNDFMINAPKMGMVGFVYIIFTSLFFFRNYEFITSRM 120
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + + + ++ Y R ++ +I+
Sbjct: 121 FNSKPRKILDSLMVHWLLITFFPIMIMIFF------------YGRHELKSILTNPFLIFL 168
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
A + + + + ++ W F +Y+ Y
Sbjct: 169 SIKIAPWIVNCLFFMMLFQISANKTLNKKILIFSSFLCASMWQFFKWAFFYYVTYNKAYP 228
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
++Y ++ + ++++Y+ + G
Sbjct: 229 SLYGSISILPIFMLWIYISWTILLFG 254
>gi|284165429|ref|YP_003403708.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284015084|gb|ADB61035.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 260
Score = 83.2 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 83/263 (31%), Gaps = 14/263 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + D +A+ + A +S+ P ++ + LG +I V P
Sbjct: 7 LTAVYRTASDRDISFLAAAFAYYAFVSLIPLVLLALVVGSLLGGEDAAQRLITVAGDFLP 66
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ +TD + ++ AA+ + L ++ ++ Y V S
Sbjct: 67 AAGEELVTDALT--TESGRAEATVVALAVAAWGALKVFRGLSLAFDKVYDEVAEESLVDQ 124
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ + +M + +L + L +
Sbjct: 125 LRDGLVVIVAGAGATALMIV-----------IGTIVGFAAEVLPFAGVLSWLTLLTGLVL 173
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ ++ LP + +LPG I W V F Y Y Y + ++
Sbjct: 174 VFLPIYYVLPPIPVEFTDVLPGAAVAAIGWTVLQAGFQLYAANAGQYQA-YGAVGVVLLF 232
Query: 252 LVFLYMLGVFFILGAELNASMII 274
+ +LY G+ + GA LN +
Sbjct: 233 VTWLYFAGMLILFGAVLNVVLSE 255
>gi|284166479|ref|YP_003404758.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284016134|gb|ADB62085.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 278
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 87/271 (32%), Gaps = 17/271 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+ + + + E + MA I+ +A LS+ P ++ +AG +G ++ +
Sbjct: 4 RRSYAVAREVVAVIDEHNVTFMAGSIAHAAFLSLLPLLLLLFLVAGAVGNEYLTEQLVAM 63
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + A G I ++ + + + + Y E
Sbjct: 64 ARDHLSPAGQGLVYEALT--HASERGGASLIGLVSLLWGMLRIFRGVTTAFDELYADGEN 121
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + ++ T+ ++
Sbjct: 122 SFPEKVVNGAVVFAVILIATVGAGFGATT--------------LASVDHPVVQAATPIGL 167
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+AL I ++ P + LPG + WVV +F Y+ +T +
Sbjct: 168 FVALSIAFFPMYYVFPDPDVSVREALPGTLIAAGGWVVLETVFGIYVGLVNTVG-TFETF 226
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+++ L++LY + ++GA +N + +
Sbjct: 227 GAVILLLIWLYGNALILLVGAAVNVVIGGHR 257
>gi|260903887|ref|ZP_05912209.1| putative tRNA-processing ribonuclease [Brevibacterium linens BL2]
Length = 346
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/263 (15%), Positives = 92/263 (34%), Gaps = 6/263 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ A++ F E G + I+ +L+V P +F GF+ + VV
Sbjct: 28 HLMRAVKRFGERLGNQFGAAITYFLVLAVMPIAMFTFASLGFVLDVLKPELLPVVVEQIE 87
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-----VVEM 125
+V E L+ + + I+ LAA Y + L ++ V+E
Sbjct: 88 AQVGGSSSLTEQLESFLTSWQSVGIIAILAALYTGQGFIGNLGAAVRAQLHADFDDVIED 147
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+S+ L + +L + L++ + V + + G ++ T
Sbjct: 148 KSFVKKFLNNVVTLLGLIIGLLLTVALTVVGAGLGSVISDLLSLPGWARALLVIIPPLIT 207
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
A ++ +F+ LP + + G + +++ + F +V + +
Sbjct: 208 FGAAWLIFMFLFTMLPDHPVGKRAKIRGSLIGALAFTILIN-FATVLVDLFSGNKAAGVF 266
Query: 246 ASIMTCLVFLYMLGVFFILGAEL 268
SI+ ++ + + + A
Sbjct: 267 GSIIAIMLTMNVFARIILFVAAW 289
>gi|326384456|ref|ZP_08206136.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395]
gi|326196801|gb|EGD53995.1| ribonuclease BN [Gordonia neofelifaecis NRRL B-59395]
Length = 325
Score = 82.8 bits (203), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 85/222 (38%), Gaps = 1/222 (0%)
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ P V+ I + VL + ++S + + + S+ + S+
Sbjct: 63 TQRIISFSTHAFTPSVVNDLIEPTVENVLGRGRVTIMSVSFVMSLWAGSSAMSCFVSSIV 122
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A+ E+R R+ + ++ V+ V++ + P L + + ++
Sbjct: 123 HAHGQHEIRHPVWQRIFALLIYMVFLVSGVLVLPLVALGPTYLHEILPDA-WDPAVSDLV 181
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
G + L L+ ++ F +LPG + + + + + Y+ +
Sbjct: 182 DWGYFPFVGVLLIGALVTLYRFALPYPMPWHRLLPGALLAGVFFWIATYVLRFYLTALTR 241
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y LA+ + L+F + LG +LGAE+NAS+ + +
Sbjct: 242 AGYTYGALATPIAFLLFTFFLGFAIVLGAEMNASIEELWPAR 283
>gi|237753082|ref|ZP_04583562.1| tRNA-processing ribonuclease BN [Helicobacter winghamensis ATCC
BAA-430]
gi|229375349|gb|EEO25440.1| tRNA-processing ribonuclease BN [Helicobacter winghamensis ATCC
BAA-430]
Length = 268
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/268 (11%), Positives = 85/268 (31%), Gaps = 9/268 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F++ D AS +S + ++ P ++ +L L + +
Sbjct: 2 LLRYLYAFLKGDLLYFASSLSFYTIFALLPMLLVVFSLVATLPDFKEYIESFKSLIIENF 61
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + L + L + L A S + + + + R ++ +
Sbjct: 62 IPTHSDVFLQYLDGFLKNSTKLGGMGLLYAFITSILFFRNYQNITTKIFH-SKGRGFWDS 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + + L + ++ F+ L + + ++I
Sbjct: 121 LSVYWTCMTLFPLGVLFSIFLSAKAYAYLDGLG--------YSTYLAWLFRLIPYFLIWI 172
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ K + L + T + W F +Y+ Y T+Y + ++
Sbjct: 173 VFFMLFKISANTKISTKNTLLSSLITALLWSFCKWGFVYYVFYNKAYLTLYGSFSIVLFL 232
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+++Y+ + G L+ + + ++
Sbjct: 233 FIWVYLSWAILLFGMGLSRGIDEMFVKE 260
>gi|15837034|ref|NP_297722.1| BrkB protein [Xylella fastidiosa 9a5c]
gi|9105274|gb|AAF83242.1|AE003894_7 BrkB protein [Xylella fastidiosa 9a5c]
Length = 269
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 56/275 (20%), Positives = 94/275 (34%), Gaps = 19/275 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F E D A+ +S ALLS+ ++ T+I +
Sbjct: 1 MALVNRFTEIDLLTQAASLSFYALLSLA-PLLVLLLWLTASLYPAAQATLITQIEQLAGN 59
Query: 73 VIAKPITDEILQVLAVPAKG--LFTISALAAAYFSSNGVEALRISLNRAYRVVEMR---- 126
A + A P G S L ++ L+ LN + + R
Sbjct: 60 SAATVAKTILQNATAQPTFGTLAGLWSTLLLFVGATAVFAQLQNVLNLIFHTDQRRLEGI 119
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+W R+ SFG VL L+I A+ +A ++ P +T
Sbjct: 120 KAWLKKRVFSFGVVLALGFLLIISMVATTALQVAFTHLPSMLP----------TIGYLST 169
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + F++ +LP G T + +G YI T + S Y +
Sbjct: 170 LLLYTLAFAFLYRYLPDRTVNWRQAYIGGAITACLFTLGRYAIGLYISTAAPGSA-YGSM 228
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+++ LV++Y V F +GA L A + K
Sbjct: 229 GALVIMLVWMYYTSVVFFIGALLTAVIDERLRDHK 263
>gi|225163949|ref|ZP_03726239.1| ribonuclease BN [Opitutaceae bacterium TAV2]
gi|224801442|gb|EEG19748.1| ribonuclease BN [Opitutaceae bacterium TAV2]
Length = 541
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/204 (13%), Positives = 68/204 (33%), Gaps = 1/204 (0%)
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + + + L + N + V RSW + +
Sbjct: 183 ELVKLIDGFIDGSKSSTAGVVGVLTLIVIVVQLFTTVENVFNEIWGVRRGRSWVMRVVYY 242
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKF-FPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L +V A + + F + ++ +++ L I L
Sbjct: 243 WTVLTLGAVLFFAAVTALSAGAFFSFFAQNMPFGIGTTIAAVLRWALPSLSIVLLMIILT 302
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ F+P + +S L G + + L Y+ + + L + +
Sbjct: 303 LFYKFIPNTRVLWLSALVGAVVVAGLVMANNYLAFLYLSKVIQQRSFFGSLGILPILMFG 362
Query: 255 LYMLGVFFILGAELNASMIIYYWR 278
LY+ +F +LG +++ ++ ++R
Sbjct: 363 LYIFWLFILLGGQVSYAVQNVHFR 386
Score = 36.2 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 34/279 (12%), Positives = 83/279 (29%), Gaps = 15/279 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R I+ I +E ++ A+ +S S++L + P + +AGF+ +
Sbjct: 29 LRGLSYAALRILSITITGIIETKAFSRAAALSFSSMLGLGPLVAIAMLVAGFVLDRKDPD 88
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA---AYFSSNGVEALRISLN 117
++ + K I +I Q A+ + A ++ + N
Sbjct: 89 LAVNTLNKII-----KFIAPQITQYEALQNEWNDYDDASFTRSDIVTAATLNVRGQKPEN 143
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
A R + ++ + V V L + + ++
Sbjct: 144 SAQRPASGVPSPEDEATAAPTAAPSAEAAGEEAQVEVNPELVKLIDGFIDGSKSSTAGVV 203
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV---- 233
+ ++ LF + V + + ++ V + + + + F
Sbjct: 204 GVLTLIVIVVQLFTTVENVFNEIWGVRRGRSWVMRVVYYWTVLTLGAVLFFAAVTALSAG 263
Query: 234 ---TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+F + + +I L + +L L
Sbjct: 264 AFFSFFAQNMPFGIGTTIAAVLRWALPSLSIVLLMIILT 302
>gi|313141540|ref|ZP_07803733.1| tRNA-processing ribonuclease BN [Helicobacter canadensis MIT
98-5491]
gi|313130571|gb|EFR48188.1| tRNA-processing ribonuclease BN [Helicobacter canadensis MIT
98-5491]
Length = 278
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 86/266 (32%), Gaps = 9/266 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F++ D A+ +S + ++ P ++ +L L + +
Sbjct: 17 ILYGFLKGDLLYFAASLSFYTIFALLPMLLIVFSLVAALPDFKDYLESFKNLVITNFLPT 76
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + + + L + L A S + + + + + R ++ + +
Sbjct: 77 YSDVFLDYMDSFLANSAKLGGMGLLYAFVTSILFFKNYQFIAGKIFHT-KPRGFWDSLAV 135
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L V ++ ++ L + L + L +
Sbjct: 136 YWTCMTLFPVGILFSIYLSAKAYAYLDVLGYKDFMLW--------LFRLSPYLITWAIFF 187
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ + L + T + W F +Y+ Y T+Y L+ ++ ++
Sbjct: 188 IFFKISANTQIDFKNTLISSLITALLWSFCKWGFVYYVFYNKAYLTLYGSLSILLFLFIW 247
Query: 255 LYMLGVFFILGAELNASMIIYYWRKK 280
+Y+ + G +L+ + + ++
Sbjct: 248 VYLSWAILLFGMKLSYVIGEVFCGER 273
>gi|58698244|ref|ZP_00373163.1| ribonuclease BN, probable , putative [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535216|gb|EAL59296.1| ribonuclease BN, probable , putative [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 241
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 48/242 (19%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 40 FPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA 98
F++ +A + + P+ I + I ++++ P + L T++
Sbjct: 10 VSFLIVLMAVASTFANFLDQYNIGWVFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAI 69
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ A + +S+ +E LR LN+AY+V + + R++S L+ ++ + + +P+
Sbjct: 70 VGAVWTASSTIEGLRTILNKAYKVPVSPPYILRRVLSILQFLVITLIITLTIVFSTLVPM 129
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
+ + + + R LF + +++ LP K + + PG
Sbjct: 130 LIDFSYQG----------LSYTRYLLIEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAV 179
Query: 219 ISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
I W + A F Y+ +F +Y L ++ L+F YML + FI GA+ N + +
Sbjct: 180 ILWTISASAFKQYLKASFDQLDLIYGSLGGVVVSLLFFYMLSLIFIYGAKFNFQLKYFNG 239
Query: 278 RK 279
+
Sbjct: 240 SR 241
>gi|87121310|ref|ZP_01077200.1| tRNA processing ribonuclease BN [Marinomonas sp. MED121]
gi|86163467|gb|EAQ64742.1| tRNA processing ribonuclease BN [Marinomonas sp. MED121]
Length = 278
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 95/270 (35%), Gaps = 7/270 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ +I F + + ++L++LL+ P I + GF + + + +
Sbjct: 13 LKISITLFKQANASLRVYQLTLASLLAAVPIITIIMGILGFTPTLKTMQANMVSLLEKHL 72
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + L + AK L + + + + ++ +++ + R+
Sbjct: 73 APGSSEVILPYLISFSDHAKNLPILGIAILILTALLLLNSCEQAIQSIWQIKQCRNLKER 132
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
L + + L + L + ++ + + + + ++ + F+
Sbjct: 133 LLTYWAMLTLGPILLGLGLSIYATLLTL-------KWQGIEIAEFLGHLANLSSFILYFL 185
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L + P ++I + + +FT + F+ Y +Y A++ T
Sbjct: 186 LLFTFNYLTPNTNTEIKLTALSTFIGTLILSISNYIFTSFAQLFANYQIIYGAFAALPTL 245
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+++L + + A LNA++ K P
Sbjct: 246 IIWLQISWSIVLASACLNAALHKQSLSKDP 275
>gi|85375451|ref|YP_459513.1| hypothetical protein ELI_13120 [Erythrobacter litoralis HTCC2594]
gi|84788534|gb|ABC64716.1| hypothetical protein ELI_13120 [Erythrobacter litoralis HTCC2594]
Length = 245
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/240 (18%), Positives = 80/240 (33%), Gaps = 17/240 (7%)
Query: 41 PFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA 100
P + G + V I + P A+ I ++ V+ P LA
Sbjct: 18 PLLGAIVLAYGIVADPLMVAENIRALSSFLPASAAELIGSQLEGVVEGPDSSKGFGLLLA 77
Query: 101 A---AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
+ + +G AL L+ AY E R + ++ A + L I++
Sbjct: 78 LAISLFGARSGATALMAGLDIAYDTTETRGFVEKNALALLITGGAVLGLGIVALALTVAG 137
Query: 158 LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIF 216
L + + +G + ++ P + PG +
Sbjct: 138 LIGDALG-------------LAASYLVLFSSGALGAVLLYRHAPDRPTATWNRTWPGAVV 184
Query: 217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
W++ LF Y+ F Y+ Y L ++M L +LY+ +LGAELN +
Sbjct: 185 FAALWLLATSLFGFYVANFGNYNATYGSLGAVMVLLTWLYLSAYLLLLGAELNVQVAARR 244
>gi|297158128|gb|ADI07840.1| putative integral membrane protein [Streptomyces bingchenggensis
BCW-1]
Length = 298
Score = 82.4 bits (202), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/271 (13%), Positives = 91/271 (33%), Gaps = 8/271 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ Y + E +A+ I+ + L+ FP I A + + + +
Sbjct: 14 IVRLMRSHAYRSYETLERVHWTRLAAAITFISFLAFFPLIAVAAAIGAATLSADQMRQLE 73
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ P + + +++ A + ++ + + V +LR L + +
Sbjct: 74 KKLAQQVPGISGQLDLSGLIE----NAATIGIVAGVLLLFTGIGWVGSLRECLRAVWELE 129
Query: 124 EMRSW-YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNG 180
E +L + + V A+ + + N ++
Sbjct: 130 EDPGNAVKRKLKDAVVLFGLGGVALASFAVSGFAVTAVGWTARHLGIPENGPGGSLLRVA 189
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A ++A F+ L +V +LP + S++ + + + +L + Y+ + S
Sbjct: 190 AFAAAVVADFVLLCYVLTWLPGVRPPRRSVVVAALIGAVGLELLKLLLSSYLQKVAAKS- 248
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
MY + L+++ + A A+
Sbjct: 249 MYGAFGVPIALLLWINFTAKLTLYCAAWTAT 279
>gi|326692407|ref|ZP_08229412.1| integral membrane protein [Leuconostoc argentinum KCTC 3773]
Length = 289
Score = 82.0 bits (201), Expect = 8e-14, Method: Composition-based stats.
Identities = 51/264 (19%), Positives = 104/264 (39%), Gaps = 9/264 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + ALL+VFP ++ A + Q T++ + P+ +A +
Sbjct: 25 FSRAQINYVGPTFAYYALLTVFPMLMSIAMIVSIANVSQA--TLMTTLNSMLPQDVAAVV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
V+A L + S + S + R+S NR E S +TR SF +
Sbjct: 83 RPIFKSVMASKQVSLLSFSVPFTLWTVSRVIAVFRLSFNRISDTDERISTMLTRFWSFLW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L+ ++ + L + + L L I + + L L++ L+ ++
Sbjct: 143 LLVILAGFGVLLIGGNILTLVVNRLPS-----NQLPLFILHQTRWLIWLGLWLALVMLNY 197
Query: 199 FLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
FLPA ++ ++ G + + V FT Y+ Y ++SI+ L++L
Sbjct: 198 FLPAKSGRAPFKMVMLGSLIELGLLEILNVAFTWYVRFGLKRYDFYQSMSSIIVLLIWLN 257
Query: 257 MLGVFFILGAELNASMIIYYWRKK 280
++ + G L + + +++
Sbjct: 258 LIATILVTGYVLIHWLTVLSAKRQ 281
>gi|224417997|ref|ZP_03656003.1| putative ribonuclease BN [Helicobacter canadensis MIT 98-5491]
gi|253827332|ref|ZP_04870217.1| tRNA-processing ribonuclease BN [Helicobacter canadensis MIT
98-5491]
gi|253510738|gb|EES89397.1| tRNA-processing ribonuclease BN [Helicobacter canadensis MIT
98-5491]
Length = 280
Score = 82.0 bits (201), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 86/266 (32%), Gaps = 9/266 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F++ D A+ +S + ++ P ++ +L L + +
Sbjct: 19 ILYGFLKGDLLYFAASLSFYTIFALLPMLLIVFSLVAALPDFKDYLESFKNLVITNFLPT 78
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ + + + L + L A S + + + + + R ++ + +
Sbjct: 79 YSDVFLDYMDSFLANSAKLGGMGLLYAFVTSILFFKNYQFIAGKIFHT-KPRGFWDSLAV 137
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ + L V ++ ++ L + L + L +
Sbjct: 138 YWTCMTLFPVGILFSIYLSAKAYAYLDVLGYKDFMLW--------LFRLSPYLITWAIFF 189
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ + L + T + W F +Y+ Y T+Y L+ ++ ++
Sbjct: 190 IFFKISANTQIDFKNTLISSLITALLWSFCKWGFVYYVFYNKAYLTLYGSLSILLFLFIW 249
Query: 255 LYMLGVFFILGAELNASMIIYYWRKK 280
+Y+ + G +L+ + + ++
Sbjct: 250 VYLSWAILLFGMKLSYVIGEVFCGER 275
>gi|68536347|ref|YP_251052.1| hypothetical protein jk1267 [Corynebacterium jeikeium K411]
gi|68263946|emb|CAI37434.1| putative membrane protein [Corynebacterium jeikeium K411]
Length = 389
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/287 (18%), Positives = 96/287 (33%), Gaps = 19/287 (6%)
Query: 9 FDII-YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVID 64
+ +I + + +S LL+ P ++ + + Q +
Sbjct: 49 WKVIAKRLYFEIFYNALFDKGATLSFFTLLTGLPTLLAFYAITTLVLDQNRNQVTALTDE 108
Query: 65 VVFGAWPEVIAKPITDEILQVLAV--PAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P+ + V+ + + IS L A + SS V A N Y
Sbjct: 109 FIAENIPDNFQSNAQTVVNTVIGSTEQSITMLVISVLFALFSSSAYVRAFSRMANEMYGR 168
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSF-----------VFVAIPLALAYVRKFFPALG 171
E RS T +G L+ + LV ++ + I L + L
Sbjct: 169 REGRSLVRTWAAMWGITLVLVIGLVFIAGAYFLREDIARPLLDKITEPLNWQGFTTFVLE 228
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTH 230
+ L I R L I + ++ P + +I + G F IS + +L
Sbjct: 229 HFLPIWQYVRWPVIFLVAVILIAILYNGAPNVRFGRIRWLTVGSAFALISITIVGLLLQV 288
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
Y+ F Y +Y L I+ L+ L + +LG +L+A +
Sbjct: 289 YLNNFG-YVGLYGALGGIIVGLIGLVVSNSLLLLGVKLDAEIARTRE 334
>gi|163733662|ref|ZP_02141104.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
gi|161392773|gb|EDQ17100.1| ribonuclease BN, putative [Roseobacter litoralis Och 149]
Length = 112
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 195 FVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
++ + P+ + + G + + W+V + F Y+ F +Y+ + LA ++ L+
Sbjct: 1 MLYRYAPSRDAAEWKWASVGAVVGCLMWIVASAGFAFYVSNFGSYNESFGTLAGVIVLLM 60
Query: 254 FLYMLGVFFILGAELNASMIIY 275
+ ++ +LGAELNA +
Sbjct: 61 WFWISAFIILLGAELNAELEAQ 82
>gi|237751340|ref|ZP_04581820.1| tRNA-processing ribonuclease BN [Helicobacter bilis ATCC 43879]
gi|229372706|gb|EEO23097.1| tRNA-processing ribonuclease BN [Helicobacter bilis ATCC 43879]
Length = 279
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 78/256 (30%), Gaps = 13/256 (5%)
Query: 21 EEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITD 80
+ + A+ +S ++ S+ P + +L + Q ++
Sbjct: 32 NDRIFHYAASLSFYSIFSIIPAFLMFFSLFSLFPSFQDQLQILKQSILDNILPDNAHEFA 91
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+IL K + + L + S R + + + + L
Sbjct: 92 KILDNFLSNGKEMGFVGFLISLISSFIFFRNFDDVAARIFEAKKRGYFDSFIIYWLLITL 151
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + F V + + V I + MLA +I +
Sbjct: 152 IPMFLATSIYFNAVIVDIYSDAV-------------ITKYYSFIPMLATWIAFAMLFRVA 198
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ ++ + I W ++F +Y+ YS +Y ++ IM +++Y+ +
Sbjct: 199 ANKPLRFFVLILASLLGAIVWYGLKIIFFYYMSYNKFYSNIYGSVSIIMFAFLWIYVSWL 258
Query: 261 FFILGAELNASMIIYY 276
+ + + Y
Sbjct: 259 VVLFSMQFCKWLDTKY 274
>gi|256390949|ref|YP_003112513.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256357175|gb|ACU70672.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 355
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/268 (19%), Positives = 99/268 (36%), Gaps = 17/268 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + + +A+ + ALLS+ P + A G+L
Sbjct: 42 RAQARNWWSVTRITFAICMRYRITGLAAEAAFFALLSLPPLAIGLAGTLGYLNGWIGAAR 101
Query: 62 VIDV-------VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
++++ + I + +LA L +I L A + S +
Sbjct: 102 IVEIKHHIEGAAGTMLSGPGVQKIDGLLTNLLANGHPELISIGFLLALWAGSRAMNVYVD 161
Query: 115 SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
++ AY + R TRL++FG +L + + + V P L AL +
Sbjct: 162 TITIAYGLSGRRGIVRTRLLAFGMYMLGLLLGSVALPLLVIGPDLL------VSALPPIT 215
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+I + L L ++ ++ LPG + + W+ G+ L Y+ T
Sbjct: 216 DLIHAVYWPLMLTVLAAFLNTLYHLAVPVRTPWSQDLPGTVLALLLWLGGSALLRDYVST 275
Query: 235 FS----TYSTMYAGLASIMTCLVFLYML 258
+ +++Y GLA+ + LV+LY+
Sbjct: 276 TFSDTKSTNSLYGGLAAAVAILVWLYVT 303
>gi|268316269|ref|YP_003289988.1| ribonuclease BN [Rhodothermus marinus DSM 4252]
gi|262333803|gb|ACY47600.1| ribonuclease BN [Rhodothermus marinus DSM 4252]
Length = 322
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/299 (15%), Positives = 91/299 (30%), Gaps = 20/299 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFV 59
+R + + + + + A I+ L+++ P +V + G L +
Sbjct: 12 LRRIWQTLRYYLVGLYHLLDRKPVFLWAQAIAFKVLVTIVPVLVLATGVLGRILRQERPF 71
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
TV + P + + + Q+ + I L Y + LR L++
Sbjct: 72 QTVARFIRDFLPPYQSDQLIQFLEQLQRA-SGTFTVIGILGLLYATMTLFTTLRGVLSQV 130
Query: 120 YRVVEM--RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI- 176
+ RS L ++ ++ V + I +++ L +
Sbjct: 131 FDEPWHQGRSILRGYLFDLRMMVQVGGLFLLTFGVSLTIQAINVAGQEWLQRLHLDYVWV 190
Query: 177 -------IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
I + L ++ F P + + L G + + W F
Sbjct: 191 QEGWRHIIQVLGLLIPYLLSLAMFFQLYYFTPKPRPPVRGALLGAVVAALLWEAAKTAFA 250
Query: 230 HYIVTF--------STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
Y S S + I+ ++Y GV FILGA L Y +K
Sbjct: 251 FYAARSTFFERFANSGISAIGHVFGLILAFGFWVYYSGVVFILGALLVLLYEKYQRDRK 309
>gi|111223692|ref|YP_714486.1| hypothetical protein FRAAL4293 [Frankia alni ACN14a]
gi|111151224|emb|CAJ62935.1| conserved hypothetical protein; putative membrane protein; putative
Ribonuclease BN domain [Frankia alni ACN14a]
Length = 366
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 99/272 (36%), Gaps = 12/272 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+ I F ++ G +A+ I+ A LS+FP ++ GF+ G V+
Sbjct: 19 FVIAVIYKFADDQGGYLAALITFYAFLSLFPLLLLLTTGLGFVLHGHPDLQEQVVTSTLS 78
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P + + D + + L A S A+ +L+ + V
Sbjct: 79 QFPIIGDQLRDDV---QALKGSGIAVAVGVLGAISGSLGVARAIGNALDTVWAVPRRARP 135
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L S++L+ + + V + L+ V A G L + +
Sbjct: 136 NP------FFARLRSLSLIGLLGLGVLMTTVLSSVTTGASAFGRLAAGFQVLAVVISTAG 189
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLAS 247
++ L A ++ I PG +F + W + L ++YI + +Y
Sbjct: 190 NAGLVLVAFKVLTARSVRVREIAPGAVFAALGWQLVQTLGSYYIAHQLKGSTQVYGLFGL 249
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ + +LY L V +L E+NA + +
Sbjct: 250 VLGLMTWLYFLAVVVVLAMEINAVRAGRLYPR 281
>gi|297623076|ref|YP_003704510.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
gi|297164256|gb|ADI13967.1| ribonuclease BN [Truepera radiovictrix DSM 17093]
Length = 287
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 87/273 (31%), Gaps = 13/273 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
V I A + + + + ++ +LS+ P + + + V I
Sbjct: 3 VLRIFSRAAMVWSSHNAPRLGAALAFYTVLSLAPLLFVAVGMTSVFLSQAEVQAGIIAQV 62
Query: 68 GAWPEVIAKPITDEILQVLAV---------PAKGLFTISALAAAYFSSNGVEALRISLNR 118
I + + + +S + LR SLN
Sbjct: 63 SRAVGEENAAIIAVLELLFRNIFDAYARPTTGVLASLGGFAGVLFGASLVLLELRASLNT 122
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY---VRKFFPALGNLLL 175
+ + + ++ F + SV +V + + + L ++
Sbjct: 123 IWGIQAEVASKREGVLRFLKNRVISVLMVFGLGFSLLVLVVLNTYLSASAALLQGRVPVV 182
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++ ++ +F +FV LP+AK + + G + + + + G L Y+
Sbjct: 183 MLQRLETTLSLGLIFAFFLFVFKVLPSAKVQWREVWLGALVSTLLFAFGRYLIGAYLAN- 241
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
S S+ Y S + L+F++ GA L
Sbjct: 242 SALSSAYGAAGSFVLVLLFVFYSAQILFFGAAL 274
>gi|329937214|ref|ZP_08286813.1| hypothetical protein SGM_2305 [Streptomyces griseoaurantiacus M045]
gi|329303495|gb|EGG47381.1| hypothetical protein SGM_2305 [Streptomyces griseoaurantiacus M045]
Length = 342
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 11/268 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F ++ +A+ ++ A LS+FP ++ + G L V+D G +P
Sbjct: 23 VVYKFFDDQATYLAALLAYYAFLSLFPIMLILVAVLGTLLSHNPGLQQDVLDSALGEFP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
V+ I + I + Y + + + +LN+ + V R
Sbjct: 82 VLGDQIAENIHSFHGN--GLALAAGVAGSLYGALGVAQGAQHALNKIWAVPRYARPDPLR 139
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
G + L+ + L + L V L I ++
Sbjct: 140 SRLKGALFLSVLALGLCL-----TTLLSVTVSDANVFGTRLATGIRVSAAVGAIILNAAL 194
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLASIMTC 251
L + L + + + + W ++Y+ + Y ++
Sbjct: 195 LQLSYRVLTHCRLPLRHMNGAALGGACVWQALQWAGSYYVQDVLRGATATYGMFGIVLGL 254
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++Y+ + F++ AE++A ++ W +
Sbjct: 255 LAWIYLGALVFLMTAEVSAVRVLRLWPR 282
>gi|330720319|gb|EGG98665.1| Ribonuclease BN [gamma proteobacterium IMCC2047]
Length = 239
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 2/207 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + +++ + E A + + LLS+ P + ++ G H +
Sbjct: 28 KVRMVRISRVLFAVLRDLKEGQLTLRAMSLVYTTLLSLVPLLAVSFSVLKAFGVHNQIEP 87
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ + + + I V + L I Y + ++ + + N A+R
Sbjct: 88 LLQNLMTPLGPQGVEITNNIIGFVENMKVGVLGAIGVALLFYTVISLMQKIESAFNYAWR 147
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V ++R+ + VL+ V + S + V+ L + L +I
Sbjct: 148 VTQVRALHQRFSDYLSVVLIGPVLIF--SAIGVSGTLMSNGFVVWLSGFEVLGWLIALLT 205
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIM 208
L + F+++F+P K K
Sbjct: 206 RLLPYLLIIAAFTFIYVFIPNTKVKWC 232
>gi|121592586|ref|YP_984482.1| ribonuclease BN [Acidovorax sp. JS42]
gi|120604666|gb|ABM40406.1| ribonuclease BN [Acidovorax sp. JS42]
Length = 305
Score = 81.2 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 94/274 (34%), Gaps = 12/274 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
+ A++ +++ DG M++ +S +LS+ P ++ + G+ ++ +I V G
Sbjct: 26 LVRAVQMWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDQAYLESNLIAQVRGVM 85
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-----ALRISLNRAYRVVEM 125
E A+ + + L +++ + GV AL E
Sbjct: 86 GERGAEVVRLALASAQEPAEGRLASMAGFVLLLSGATGVFVELQSALERLWAHGQPAPER 145
Query: 126 RSWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++W+ RL YVL L++ + AI + + P ++
Sbjct: 146 KAWWRMASLRLRGLAYVLAIGFLLLVSLVLSTAINVLATWASARLPFGSGT--LLQIVNE 203
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + K ++ G + + VG L Y+ T + S Y
Sbjct: 204 AVAFAVAVALFLGLMRIGSGPKPPTHCLVFGAVVGATLFTVGKQLLALYLSTAAVVSA-Y 262
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
S++ L+++Y + A ++
Sbjct: 263 GAAGSLVVLLMWIYFSSAVLLFSAASARALHETR 296
>gi|117928861|ref|YP_873412.1| ribonuclease BN [Acidothermus cellulolyticus 11B]
gi|117649324|gb|ABK53426.1| ribonuclease BN [Acidothermus cellulolyticus 11B]
Length = 345
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 83/277 (29%), Gaps = 20/277 (7%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ + + + F ++ A ++ ++FP ++ + G+L G +++
Sbjct: 20 LLGVPFATVRKFGDDQAGTQAVLLAYYGFFALFPLLLLLTTILGWLLPGHPGLQNRILNS 79
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLF--TISALAAAYFSSNGVEALRISLNRAYRVV 123
+P I ++ + L + Y + +A + ++N + V
Sbjct: 80 ALANFP-----IIGTQLRGDVHALRGNLLAVIVGIAGLLYGAQGVGQAAQSAMNTVWNV- 133
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R +V + V L +
Sbjct: 134 PFRDRPNFFSRRLRGYAWLAVLGLATLISTVVAGFGAQVFPGALGWLWS---------QS 184
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY-STMY 242
+ L AA + + GV+ + W + Y+ + S +Y
Sbjct: 185 VPFAINLGVFTVIFRVLVAAPLRWRDVRIGVLLAAVFWQGLQIGGGFYVSRTLNHASDVY 244
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A ++ L +LY+ + AE+N + W +
Sbjct: 245 GFFAIVIGLLSWLYLAAELTLFAAEVNVVIRDRLWPR 281
>gi|71905876|ref|YP_283463.1| ribonuclease BN [Dechloromonas aromatica RCB]
gi|71845497|gb|AAZ44993.1| Ribonuclease BN [Dechloromonas aromatica RCB]
Length = 296
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/272 (13%), Positives = 94/272 (34%), Gaps = 2/272 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
+ + F G +A I+ ALLSV P ++ + L + + V+
Sbjct: 17 VLKHPLAFVLRILRGFSGNQGLLLAGAIAYYALLSVVPLLILSVFVLSHLVSQVELLDVL 76
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF--SSNGVEALRISLNRAYR 121
++ + ++ L + + + +G+E +
Sbjct: 77 GRYLEWLVPSQSQAVLADVSGFLQNGIGIGALLLGTMLFFSSLAFSGLEKAMAIIFFHRG 136
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ R + ++ ++ + +V + + L+ ++F ++ F L +
Sbjct: 137 RQKKRHFLVSAVLPYCFVFVLGIALLAVTFASASLQAMAHESIYFLGWEWPLRGVSGLLF 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+L L ++L +P ++ + L G + W + Y+ + S S +
Sbjct: 197 YLLGLLMETAVLTSLYLIIPVGRTLLSHALIGGFSAALLWEALRHVLVWYLTSLSRVSVV 256
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
Y L + + L + + +LGA++ A
Sbjct: 257 YGSLTTAVVALFCMELGATLLLLGAQVIAEYE 288
>gi|296273834|ref|YP_003656465.1| ribonuclease BN [Arcobacter nitrofigilis DSM 7299]
gi|296098008|gb|ADG93958.1| ribonuclease BN [Arcobacter nitrofigilis DSM 7299]
Length = 263
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 85/272 (31%), Gaps = 20/272 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ +F + + ++ F +D A+ +S + S+ P + L
Sbjct: 1 MKKNSKKLFAKLIEILDSFFNDDTTYYAASLSFFTIFSILPIFALIIAIVSNLEQFNDYV 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + L I + + + + +N+ +
Sbjct: 61 DLFINYILNLINPSHSQNFAQEFKNFIANSDKLGNIGIIYMLFVFTMFFKDYEYIVNKIH 120
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + LL ++ + ++
Sbjct: 121 KTKRKSIYASFFFYLLFITLLPAIFAGYIILTTFYNNTIFDFL----------------- 163
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
T++ + + + + L T + + LF +YI+ TY+T
Sbjct: 164 ---LTLMLGWSIFFVLFKLTVNTHISVKAALISSFLTLVVISITKNLFIYYILYNQTYTT 220
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
+Y +A+++ +++Y + F+ G +L ++
Sbjct: 221 LYGSMATLLFTFLWIYTSWIIFLYGIKLCHNL 252
>gi|88856447|ref|ZP_01131105.1| narrowly hypothetical protein [marine actinobacterium PHSC20C1]
gi|88814314|gb|EAR24178.1| narrowly hypothetical protein [marine actinobacterium PHSC20C1]
Length = 355
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/298 (12%), Positives = 104/298 (34%), Gaps = 18/298 (6%)
Query: 1 MREYFCIVFDI-IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQ 57
++ V ++ + H+ E G +++ +S + +VF I G +AG + G
Sbjct: 7 LKPAIAWVLELRVVRVFRHYAENLGPLLSAGLSYQGIFAVFAAIWVGFAVAGVIVQGNPV 66
Query: 58 FVPTVIDVVFGAWPEVIAKP----ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
+ V + + P +I + I+A + + + + R
Sbjct: 67 LLNAVYNFISANIPGLIGDGSGNGAITRETLADSSVLGITGVIAAFGLFFTALGWIASGR 126
Query: 114 ISLNRAYRVVE-MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
++ + + ++ + +L G + + ++I + + VA AL+++ +
Sbjct: 127 DAVRSMFGLEAAETNFLLLKLRDVGLAIGFGLAVLISAVLSVASTAALSWILDLVSINED 186
Query: 173 LL---LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ ++ L + + K + G I + +
Sbjct: 187 SAAARVATQIVAFVIVLILDTATLGVFYRVVSGIKIPFRMLAQGTIIAALLLGALKFSGS 246
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL------NASMIIYYWRKKP 281
+ +T + + A A I+ L++ ++ ++G+ +A + I ++ P
Sbjct: 247 FLLEG-ATRNPLLASFAVIIGLLIWFNLICQIILIGSAWIAVGADDAELDISGEKRHP 303
>gi|78776574|ref|YP_392889.1| ribonuclease BN [Sulfurimonas denitrificans DSM 1251]
gi|78497114|gb|ABB43654.1| tRNA-processing RNAse BN [Sulfurimonas denitrificans DSM 1251]
Length = 277
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/280 (15%), Positives = 98/280 (35%), Gaps = 12/280 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFV 59
++ F +++ + + F+++D A+ +S + ++ P ++ L +
Sbjct: 4 IKGKFLKIYEYVKLFVTSFIDKDLTFYAASLSFYTIFTLIPLLLITLTLFTSMPNFADSY 63
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ + +F V ++ + I L + + IS +A S + N+
Sbjct: 64 EKLQEFIFSNIMPVNSEAVMGHINGFL-QNSLEMSMISFVAVIISSLLFFQNFEYIANKI 122
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ V + W S I I +A + + N+ N
Sbjct: 123 FHVKKRGIWE-----SITTFWTLLTLTPIGLGASFYITGYVASLMAENEYIPNI-----N 172
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
Y L +++ + K + L T I + + F +YI +Y+
Sbjct: 173 ILPYIPYLIIWVLFFLIFQISANTKIDAKASLISSFITAIIFSIAKNGFIYYIFYNKSYA 232
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
TMY + +M +++Y + FI G +L + Y +
Sbjct: 233 TMYGSFSIVMILFLWIYASWIVFIYGLKLCYLINRVYENR 272
>gi|157165667|ref|YP_001466776.1| putative molybdopterin biosynthesis protein [Campylobacter concisus
13826]
gi|112800135|gb|EAT97479.1| ribonuclease BN [Campylobacter concisus 13826]
Length = 273
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 96/255 (37%), Gaps = 9/255 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+++ + A+ +S +LS+ P ++ ++ L + + I + + I
Sbjct: 21 LKDKELFHYAASLSFHTILSIIPILLISFSIFTKLPSFEDYYAKIQDFVFSALLPSNQEI 80
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
LQ + L + +A + S+ +++ R + R ++ +
Sbjct: 81 ISNYLQNFLQNSGNLGIVGFVAMIFTSAMFFSDYEYVVSKVTRASKARGFWSALSSYWTL 140
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ LA + L ++ + L N++ N L +++ +L
Sbjct: 141 ITLAPLGLAGSFYLSSLVQEMLN---------SNVITSSINFLSIVPYLIIWVIFCVTYL 191
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+ K S L + W +G F +Y++ TY ++Y ++++ V++Y+
Sbjct: 192 ISVNDEIKFKSALFSSFAASLVWYLGKSAFVYYVLYNKTYLSVYGSFSAVLFFFVWIYIS 251
Query: 259 GVFFILGAELNASMI 273
+ F+ G + A +
Sbjct: 252 WIIFLYGLKFCAYLS 266
>gi|218460097|ref|ZP_03500188.1| ribonuclease BN [Rhizobium etli Kim 5]
Length = 179
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
E RS LI + L A V+M + +PL L+Y+ LL+ W +
Sbjct: 2 EKRSLVRLNLIGLCFTLCAVFFAVLMVALVGVMPLVLSYLWLDQFKEQMALLLRWPLLLL 61
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+A+ + F PA ++ + G T ++W ++ F+ Y+ F+ Y+ Y
Sbjct: 62 VVAVAVTLVYRFGPSREPA---RVRWMTWGAALTTVTWAAMSLGFSFYLEHFANYNATYG 118
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
L +++ LV++++ V I+GAELNA +
Sbjct: 119 ALGALIGFLVWIWLSVVILIIGAELNAELEHQ 150
>gi|284035019|ref|YP_003384949.1| ribonuclease BN [Spirosoma linguale DSM 74]
gi|283814312|gb|ADB36150.1| ribonuclease BN [Spirosoma linguale DSM 74]
Length = 307
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 99/281 (35%), Gaps = 12/281 (4%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-- 60
+ VF ++ A + D MA + + + P ++ + + L +
Sbjct: 2 KKVVPVFRLLKQAFSNLQANDPIRMAGATAFFSFFGLPPIVIILSRVLSGLFNDHYQRIS 61
Query: 61 -TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+ D + + A + D ++ T +L +S + + N
Sbjct: 62 GQLFDELADLFGSRSANQLEDISERLQLPKPDMALTALSLLLLLIASTTLFTIVK--NSL 119
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII-- 177
++ ++ + L ++ +++ S + +I LAL + + +L ++
Sbjct: 120 NQLWNVKRKTGRQAYRVLGDKLIALAIILGSGLLFSISLALEQLMNQVSSSLSLSSLVYY 179
Query: 178 ----WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
G + ++L + + FLP + PG FT + + G + ++
Sbjct: 180 REIMTLGHQFVSILIRMVWFAILFKFLPDVNIPWRVVWPGAFFTSLLFKFGEWVLNKLLI 239
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
T S+ MY +I+ L+F++ + F GA
Sbjct: 240 T-SSVGPMYGRSGAIILVLLFVFYGALMFYYGAAFTRQYSE 279
>gi|222109390|ref|YP_002551654.1| ribonuclease bn [Acidovorax ebreus TPSY]
gi|221728834|gb|ACM31654.1| ribonuclease BN [Acidovorax ebreus TPSY]
Length = 305
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/274 (15%), Positives = 94/274 (34%), Gaps = 12/274 (4%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAW 70
+ A++ +++ DG M++ +S +LS+ P ++ + G+ ++ +I V G
Sbjct: 26 LVRAVQMWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDQAYLESNLIAQVRGVM 85
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-----ALRISLNRAYRVVEM 125
E A+ + + L +++ + GV AL E
Sbjct: 86 GERGAEVVRLALASAQEPAEGRLASMAGFVLLLSGATGVFVELQSALERLWAHGQPAPER 145
Query: 126 RSWYIT---RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
++W+ RL YVL L++ + AI + + P ++
Sbjct: 146 KAWWRMASLRLRGLAYVLAIGFLLLVSLVLSTAINVLATWASARLPFGSGT--LLQIVNE 203
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + K ++ G + + VG L Y+ T + S Y
Sbjct: 204 AVAFAVAVALFLGLMRIGSGPKPPTHCLVFGAVVGATLFTVGKQLLALYLSTAAVVSA-Y 262
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
S++ L+++Y + A ++
Sbjct: 263 GAAGSLVVLLMWIYFSSAVLLFSAASARALHETR 296
>gi|313683303|ref|YP_004061041.1| tRNA-processing RNAase bn [Sulfuricurvum kujiense DSM 16994]
gi|313156163|gb|ADR34841.1| tRNA-processing RNAse BN [Sulfuricurvum kujiense DSM 16994]
Length = 268
Score = 80.5 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/274 (12%), Positives = 80/274 (29%), Gaps = 14/274 (5%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ I + + AS +S + +V P ++ +L + + I
Sbjct: 3 LKALLRHIRLFFLMLFDREITVYASSLSFYTIFTVVPLLIISLSLIANVPVFEEQYAKIQ 62
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+ + L+ + L I S + +++ ++V +
Sbjct: 63 IFIFENMMPVQTAAVAGYLESFFQNSVQLGVIGFTTMIVSSLLFFQNFEHIVSKIFKVPK 122
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
W L V + MS + ++ +
Sbjct: 123 RGLWDAITTYWTLITLTPIVLIASMSL--------------NAYLVSHVSGAALHALSIF 168
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L L+ ++ A + + W + F Y+ TY+TMY
Sbjct: 169 PFLLLWGIFFVIYHIAVNADVSPKAAAISSFIVAVVWGIAKNSFIQYVFYNKTYATMYGS 228
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
++++ +++Y+ + I G +L + R
Sbjct: 229 FSALIFFFLWIYVSWIIVIYGMKLCYLINRAAQR 262
>gi|326315093|ref|YP_004232765.1| ribonuclease BN [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323371929|gb|ADX44198.1| ribonuclease BN [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 327
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/279 (15%), Positives = 93/279 (33%), Gaps = 14/279 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-VIDVVFGAW 70
+ A+ +++ DG M++ +S +LS+ P ++ + G+ ++ T +I V
Sbjct: 23 LVRAVNLWLDADGLRMSAAMSFYGMLSLAPLLLLLVGVLGWWIDKSYLETNLIAQVQSVM 82
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYF-SSNGVEALRISLNRAYRVVEM---- 125
E A+ + + L +I+ ++ L+ +L R +
Sbjct: 83 GERGAEVVKLALSSAREPSEGRLASIAGFVLLLSGATGVFVELQSALERLWTSGHPPVAD 142
Query: 126 -----RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RL YVL L+I V I + + P ++
Sbjct: 143 NNKAWWRMASLRLRGLAYVLAIGFLLLISLVVSTVIHVVANWASARLPFASG--PLLQLV 200
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + + K + ++ G + I + VG L Y+ T + S
Sbjct: 201 NELVAFGIAVLLFVGLMRIGTGPKPPMACLVFGAVVGAILFTVGKQLLALYLATAAVVSA 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
Y S++ L+++Y + A ++
Sbjct: 261 -YGAAGSLVVLLMWIYFSSAVLLFSASCARALQEARAEH 298
>gi|55379396|ref|YP_137246.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
gi|55232121|gb|AAV47540.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
Length = 379
Score = 80.1 bits (196), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/223 (12%), Positives = 66/223 (29%), Gaps = 18/223 (8%)
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
G F ++ + + D + G + + + L
Sbjct: 20 GGEAFAERIVTAAGDVLTPAASTLLEDALTS--GAGRGGATVLGVGVTLWSALKVFRGLD 77
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ +R Y S + + + LV + + + V
Sbjct: 78 TAFSRVYGTDGPDSIVREIVDGLAALGGIGIALVGLGIIGAFGTVLGVQVA--------- 128
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
A + L + + ++ P + + +PG +F W + F Y
Sbjct: 129 ------LGGLALVPVLAVAFLPLYYLFPDQEMTLREAVPGAVFAGGGWTLLGTGFNVYAA 182
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+Y +Y + ++ + + Y G ++GA +NA++
Sbjct: 183 QADSY-QVYGVIGGVLLLVTWFYFAGQVLLVGAAVNAALADRQ 224
>gi|187919992|ref|YP_001889023.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
gi|187718430|gb|ACD19653.1| ribonuclease BN [Burkholderia phytofirmans PsJN]
Length = 300
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 92/268 (34%), Gaps = 4/268 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F G +A ++ ALLS+ P ++ + + +
Sbjct: 19 FALQTLKAFRANQGLLLAGAVAYYALLSIVPLMILIVIALSRFVPQHVLLAALAHLLQWL 78
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + E+ L+ + + L +FSS L +++ + +
Sbjct: 79 VPGQSNALVHELANFLS-HRAVIGWVLLLTMIFFSSLAFTVLENAMSLIFVHRVVVRRRH 137
Query: 131 TRLISFG---YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
L + Y+L V ++I++FV + A F +L + +
Sbjct: 138 FLLSAMLPYCYILCLGVGILIVTFVSSGLEAIGAEGIDLFGLHVSLQGLSRVVLYLLGLA 197
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L ++L +P + + L G + + W + + Y T S S +Y L
Sbjct: 198 GEVFVLTSIYLVMPVGRPSLKHALFGGVVAAVLWEITRHVLVWYFATLSQVSVVYGSLTM 257
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIY 275
+ L L L +LGA++ + +
Sbjct: 258 AIVILFSLEWLATLLLLGAQVISQYERF 285
>gi|239945205|ref|ZP_04697142.1| putative integral membrane protein [Streptomyces roseosporus NRRL
15998]
Length = 320
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/250 (16%), Positives = 85/250 (34%), Gaps = 14/250 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ ++ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 13 WHLLKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTTTTTVASIERN 72
Query: 69 AWPEVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ V + +I A + S V ++ Y
Sbjct: 73 ILSASQTVLSERGVNDFAKPLLADVTTGARPDVISIGFAIALWSGSRAVNVFIDTITVMY 132
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ R TRL++F ++A + ++ + V P + + +I
Sbjct: 133 GLDGHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP------DRVVEFVPWGTEVIAVL 186
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+L L ++ +S + +PG + WV+G+ L Y+ T
Sbjct: 187 YWPLVILLTIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVEGPT 246
Query: 241 MYAGLASIMT 250
+Y LA+ +
Sbjct: 247 IYGSLAAPIA 256
>gi|242309514|ref|ZP_04808669.1| tRNA-processing ribonuclease BN [Helicobacter pullorum MIT 98-5489]
gi|239524085|gb|EEQ63951.1| tRNA-processing ribonuclease BN [Helicobacter pullorum MIT 98-5489]
Length = 281
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/261 (11%), Positives = 83/261 (31%), Gaps = 9/261 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F++ D A+ +S + ++ P ++ +L L + + +
Sbjct: 23 FLKGDLLYFAASLSFYTIFALLPMLLIVFSLVAALPEFKEYLESFKNLVITNFLPTYSDV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
E + + L + A S + + + + + R ++ + + +
Sbjct: 83 FLEYMDSFLANSTKLGGMGLFYAFVTSILFFKNYQFIAGKIFHT-KPRGFWDSLAVYWTC 141
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ L V ++ ++ L + L L + +
Sbjct: 142 MTLFPVGILFSIYLSAKAYAYLDILGYKDFMLW--------LFRITPYLVTWAIFFVLFK 193
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
+ L +FT + W + F +Y+ Y T+Y + ++ +++Y+
Sbjct: 194 ISANVYISTKNTLLSSLFTALLWSLCKWGFVYYVFYNKAYLTLYGSFSILLFLFIWVYLS 253
Query: 259 GVFFILGAELNASMIIYYWRK 279
+ G L+ + + ++
Sbjct: 254 WAILLFGMSLSRGINEVFIKE 274
>gi|295394814|ref|ZP_06805029.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294972410|gb|EFG48270.1| membrane protein [Brevibacterium mcbrellneri ATCC 49030]
Length = 345
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/262 (14%), Positives = 88/262 (33%), Gaps = 5/262 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ D + F G A+ I+ +L++ P ++F + GF V V
Sbjct: 28 HLKDTVTRFGARLGNQFAAAITYFLVLAIIPILMFAFAILGFTLDVLKPEWVGVVNDWIT 87
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA----YRVVEMR 126
+ +LQ + + + L+A + + + L+ ++ +
Sbjct: 88 ETAPGQDELVAMLQNFLDNWQAVGIVGVLSALFTAQGFIGNLKDAIRAQLTDDMDDIPKE 147
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + +L V + + V + + + G ++ I T+
Sbjct: 148 PFLARTFNNVYTLLGILVLVFLTLTATVLGTGLQSAIASWLDLPGWFAVVFNILTIALTV 207
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
++ +FV +P K + + G + ++ V L T I FS S A
Sbjct: 208 AMNWLLFMFVFTTIPDKKIPMRTRAIGSLTGALALAVLLNLATVLISIFSG-SPTAALFG 266
Query: 247 SIMTCLVFLYMLGVFFILGAEL 268
I+ ++ + + ++ A
Sbjct: 267 PIIAIMLSMNLFIRILLMVAAW 288
>gi|257093614|ref|YP_003167255.1| ribonuclease BN [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
gi|257046138|gb|ACV35326.1| ribonuclease BN [Candidatus Accumulibacter phosphatis clade IIA
str. UW-1]
Length = 287
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/277 (15%), Positives = 98/277 (35%), Gaps = 4/277 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ + F G +A+ I+ ALLSV P ++ L +
Sbjct: 9 QQVLKHPAAFALRTLRSFNGNQGLLLAAAIAYYALLSVVPLLILSVVALSHLVDQAELLA 68
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ ++ E+ + + + + + +FSS L ++ +
Sbjct: 69 TLGRYLEWVVPSQSRAFLAEVSKFME-QRAAVGAVLLVTMLFFSSLAFSVLEKAMTVIFA 127
Query: 122 VV---EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
E R + + ++ + +VLL V L+ ++ VA+ +F +L +
Sbjct: 128 HRAAAERRHFLTSAVLPYCFVLLLGVALLGVTIASVALEAVAQESVRFLGRDWSLRGVAG 187
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
N + A L ++ +P K ++ L G + W V + + + S
Sbjct: 188 NLLYLLGLSAEIGILTAIYRIMPVGKVRLRHALFGGCTATLIWEVIRQVLVWFFSSLSKA 247
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
S +Y LA+ + + + + + GA++ +
Sbjct: 248 SLVYGPLATAVVAMFSMEIAATLLLFGAQVISEYERL 284
>gi|84497794|ref|ZP_00996591.1| hypothetical protein JNB_16943 [Janibacter sp. HTCC2649]
gi|84381294|gb|EAP97177.1| hypothetical protein JNB_16943 [Janibacter sp. HTCC2649]
Length = 340
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 89/268 (33%), Gaps = 15/268 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGAWPE 72
I F ++ + I+ A LS FP ++ + F+ ++D P
Sbjct: 23 VIYKFFDDQAGYLVGLIAYYAFLSFFPLLLIFTTVLSFVLVNYPDLKERMLDSALSEIPI 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ A+ + L+ + +S + A Y +A + ++N + V R+
Sbjct: 83 IGAQLGQPQSLR----GSATGVIVSGVVALYGGLGVGQAFQYAMNTVWGV--PRNVRPNP 136
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ G L +T+++ + I + A FP + + + AT L +
Sbjct: 137 FRARGRSFLLLLTILLFVVLTTGITIVSAKAISSFPVTTQVAVAV------ATFLGTALV 190
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVG-AVLFTHYIVTFSTYSTMYAGLASIMTC 251
A + ++ G I ++W + S+ S ++
Sbjct: 191 FGLGMRRAVALDLGLKNVAVGAIGAALTWQALQSYGVGFVERAVSSTSATNGVFGLVIGL 250
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
F ++ + AE + + + +
Sbjct: 251 FAFFHLAAFGTVFFAEADVVRANHLYPR 278
>gi|296268657|ref|YP_003651289.1| ribonuclease BN [Thermobispora bispora DSM 43833]
gi|296091444|gb|ADG87396.1| ribonuclease BN [Thermobispora bispora DSM 43833]
Length = 315
Score = 79.7 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 6/268 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
D + + + G +A + A LS FP I ++ G+ P ++ ++
Sbjct: 24 RWLDHLVRTHQRYRHCSGDRLAGAFTYFAFLSFFPLIALAFSVFGYFA--AARPEILTIL 81
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A + L+ +A I Y V+A+R +L + R
Sbjct: 82 TKAIYAQLPGLAERLPLEQIADARVPAGIIGLGGLLYAGLGAVDAMRYALREIWMAGLPR 141
Query: 127 S-WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP--ALGNLLLIIWNGRIY 183
+ RL +LL VT + V A V +F +W +
Sbjct: 142 HNPLVGRLRDLVTLLLVGVTALASVAVGGFATSATGTVTGWFGLAGSPWGGAAVWLAGLG 201
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
A +LA + + +L A +L G + + + L + + +Y
Sbjct: 202 AALLADLAIFLVLFGWLAAPSQPFGVVLRGALLGAAGFGLLKQLAVLLLAHTL-RNPVYG 260
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNAS 271
A ++ L+++ + + A A+
Sbjct: 261 TFAVVVGLLLWINLSARVVLYAAAWTAT 288
>gi|121606091|ref|YP_983420.1| ribonuclease BN [Polaromonas naphthalenivorans CJ2]
gi|120595060|gb|ABM38499.1| ribonuclease BN [Polaromonas naphthalenivorans CJ2]
Length = 309
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 101/268 (37%), Gaps = 6/268 (2%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT-V 62
++ ++ A+ ++ DG M++ +S +LS+ P +V + G+ F+ + +
Sbjct: 19 RLQKIYLPLWRAVNQWIAADGMRMSAAMSFYGVLSLAPLLVLLVAVMGWWLDRSFIESSL 78
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA-LRISLNRAYR 121
+ + G E A+ + + ++ A + GV A L+ + R +R
Sbjct: 79 VAQIRGVIGEQGAQVVQQAMTSAKQPSEGITASLFAFGLLLSGATGVFAELQDAFERLWR 138
Query: 122 VVEMRSWYITRLISFGYVL---LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ S L + L + V +A+ + + + + ++W
Sbjct: 139 QGSGETPRQKWWYSASLRLRGVGYILALGFLLLVSLAVSTFSSLLSGWAGTYLPIDKVVW 198
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
++ + + A K + ++ G + I + VG L +Y+ T +
Sbjct: 199 VLNELVSIAFCVALFLGLMRMSSAPKPALRFLVMGSVAGAILFQVGKYLMAYYLSTAAVV 258
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGA 266
S Y S++ L+++Y +L A
Sbjct: 259 SA-YGAAGSLVVILMWIYFSSGVLLLAA 285
>gi|323342957|ref|ZP_08083188.1| hypothetical protein HMPREF0357_11369 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463021|gb|EFY08216.1| hypothetical protein HMPREF0357_11369 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 299
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 92/273 (33%), Gaps = 30/273 (10%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+++ + +E +G ++ S ++ + PFI+ G V
Sbjct: 1 MKKFIKKI----QTVMEMMSSNEGTLFTYALAYSIIVGIAPFIIISVVFVGTYVYD--VS 54
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+I ++ P + P D I Q + L + + +S + + + +
Sbjct: 55 QIIQLLQRYVPADLILPFVDYI-QTSDLSNLWLIVSLLGVSIWVASKSIYSFLLLSSEQD 113
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + + +++ + + +V
Sbjct: 114 GVNINHFFLRILACVYFIMIVLGIMAFGILIGYVP-----------------------FI 150
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ T + + +F + L ++ ++ G T I ++ LF YI +S Y T
Sbjct: 151 NKFTTPIVITFFFVFFYRLLSFKYTRFRDVIWGSAITSIVLILLGRLFFVYINQYSNYQT 210
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+Y LAS+M L+ +++ G +N +
Sbjct: 211 IYGPLASMMILLISGWIIAWVVFFGYCINYVVR 243
>gi|325962568|ref|YP_004240474.1| ribonuclease [Arthrobacter phenanthrenivorans Sphe3]
gi|323468655|gb|ADX72340.1| ribonuclease, putative [Arthrobacter phenanthrenivorans Sphe3]
Length = 384
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/267 (15%), Positives = 103/267 (38%), Gaps = 9/267 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
A H+ + G M++ I + S+ + G ++AG + + T++ V +
Sbjct: 62 MRAFRHYNLQHGPLMSAGIGFNMFFSITGLLTTGFSIAGLVLRSQPALLDTIVSSVAQSA 121
Query: 71 PE----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM- 125
P + + D + TI+A + S + +R L + +
Sbjct: 122 PGLLKVSGGEGLVDPQDLLNPDGLGWTATIAAAVTVFTSLRWIAGMRDGLRGVLELPPLL 181
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYA 184
+ + +L G +LL V LVI + + A +V F + + + +I
Sbjct: 182 VNPVLLKLRDAGTLLLLGVALVISAGASLVFGTAAGWVTDFLRLDEVVAGPLTTSVKIAV 241
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ ++ + + + K ++L G I + + +F+ ++ + + + A
Sbjct: 242 PLVLSWVTAVIMFRLAGSLKLSRRALLEGTILAALGTSILQ-IFSTELLAGAGRNPILAP 300
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ L++ ++ +++ A +A
Sbjct: 301 FAIIIGLLIWFNLVSQVYLIAAGWSAV 327
>gi|34557836|ref|NP_907651.1| putative ribonuclease BN [Wolinella succinogenes DSM 1740]
gi|34483554|emb|CAE10551.1| PUTATIVE RIBONUCLEASE BN EC 3.1 [Wolinella succinogenes]
Length = 269
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/255 (11%), Positives = 81/255 (31%), Gaps = 11/255 (4%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVIDVVFGAWPEVIAKP 77
F + + A+ +S + ++ P ++ +L L Q + + +
Sbjct: 14 FFDAELSFYAASLSFYTIFALIPLLLIVFSLLANLPNFQDQLLELKGFLLSNLMPTNTEV 73
Query: 78 ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFG 137
++ + + + +K L +S + + R ++ + + +
Sbjct: 74 VSLYLDRFMENSSK--LGNMGLVYVLIASLLFFKNYQYIVAKMFNSKPRDFWSSVTVYWT 131
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ L + L + F + L G +++ L +
Sbjct: 132 LMTLLPIGLSLSIFFSTQAQMILEESGYHRLDPG--------VSGIVPAFLVWVMLFVLF 183
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+ + L + T + W+ F Y+ Y T+Y + ++ L+++Y+
Sbjct: 184 KISANKPLTLRASLLSSLLTALVWLFSKWAFVFYVFHNKAYLTLYGSFSILLFFLLWVYL 243
Query: 258 LGVFFILGAELNASM 272
+ G L ++
Sbjct: 244 SWAILLYGMRLCEAL 258
>gi|158314310|ref|YP_001506818.1| putative ribonuclease BN [Frankia sp. EAN1pec]
gi|158109715|gb|ABW11912.1| putative ribonuclease BN [Frankia sp. EAN1pec]
Length = 546
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/270 (17%), Positives = 94/270 (34%), Gaps = 15/270 (5%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F E+ G +A+ I+ LS+FP ++ GF+ G V+ +P
Sbjct: 23 VVYKFAEDQGGYLAALIAFYGFLSLFPLLLLLTTGLGFVLAGHPDIQEQVVSSALSQFPI 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE--MRSWYI 130
+ + +D + I L + + S AL +L+ + V + +
Sbjct: 83 IGDQLRSDV---QALRGSAVAVAIGVLGSIWGSLGVARALGNALDTVWAVPRRSRPNPFF 139
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
R+ SFG + L + +V+ + + A L +++ +L F
Sbjct: 140 ARVRSFGLIGLFGLGVVLTTLLSAITTRAGDLGTGLGAGAQVLAVVLGIAGNTGLILMAF 199
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIM 249
L ILPG + W + T+ + + +Y A ++
Sbjct: 200 -------RLLTVKSVTFGQILPGAAIAALGWQLLQSAGTYLLQYQLQGRTQVYGLFALVL 252
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +LY+L + E+N + +
Sbjct: 253 GLMTWLYLLAAVIVFAMEINTVRAERLYPR 282
>gi|332655162|ref|ZP_08420903.1| YihY family protein [Ruminococcaceae bacterium D16]
gi|332516022|gb|EGJ45631.1| YihY family protein [Ruminococcaceae bacterium D16]
Length = 292
Score = 78.9 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 12/261 (4%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL---QVLA 87
+S +L++FP ++ G L V + P+ I D + +
Sbjct: 33 LSYFLILTLFPLLMCVNFFIGLLPLEP--EDVFFALEPLLPQESLTIILDYLTYVSSIPQ 90
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
+ L S +S + L +++ Y V S L +L +
Sbjct: 91 NQSTPLLLASLFTILLSASAALRTLFQTMDELYEVPRDNSIKRLVLSVVLSLLFLLTLYL 150
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
+ VF A R P + L+ + + + + + + L L +
Sbjct: 151 SIIVVFTGDWFFQALERTLPPKILELIPLHMLASFWTQLRYVLLFCFVLLLVLAVYRLGT 210
Query: 208 MSIL-------PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
L + + ++ V +VLF+ +I S YS +Y LAS++ LV+LY G
Sbjct: 211 PRALHVKGTIRLTALLSALAMVACSVLFSWFIDMSSRYSLVYGSLASLIILLVWLYFCGN 270
Query: 261 FFILGAELNASMIIYYWRKKP 281
++GA + I WR P
Sbjct: 271 ILVIGAVVGQVWIRGRWRGDP 291
>gi|297567055|ref|YP_003686027.1| ribonuclease BN [Meiothermus silvanus DSM 9946]
gi|296851504|gb|ADH64519.1| ribonuclease BN [Meiothermus silvanus DSM 9946]
Length = 266
Score = 78.9 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/274 (16%), Positives = 93/274 (33%), Gaps = 14/274 (5%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVF 67
D + A + + A+ ++ AL S+ P + + G + G + V +
Sbjct: 2 DFLRHAYRLYNQSHIPFFAASLAYYALFSLMPLLFLLVGVFGLVLAGNEALLEAVRQRLS 61
Query: 68 G--AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ +L+ L A L S L + +SN AL ++ + +
Sbjct: 62 EVALLLFPTQPDLAQGLLKFLTSGAAPLTAGSFLVLFWSASNFFAALAYAM---GVIFQT 118
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ RLI+ + L++++ +++ L Y+ L L +
Sbjct: 119 PPGFRNRLIALIAPGALGLGLILLALGGLSLAFILRYLPPELGFLRGSLEHV------LP 172
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + LP + + L G F + W + + S Y Y L
Sbjct: 173 VLVTVGLFYLTYRLLPRPAPRRLHALSGAGFAALVWEGVRLGIPALLPR-SQYELFYGPL 231
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
A + ++ Y+ ++G L + ++ K
Sbjct: 232 AGFLLAMLGFYLSMWILLVGGLLARVLEDWHAPK 265
>gi|240169691|ref|ZP_04748350.1| hypothetical protein MkanA1_10287 [Mycobacterium kansasii ATCC
12478]
Length = 314
Score = 78.9 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/275 (16%), Positives = 108/275 (39%), Gaps = 13/275 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLGAHQFVP 60
++ I + ++ ++ ++ + LS+ P + + A L G
Sbjct: 17 IWRISLRTLSKSWDDSIFSESAQAGFWSALSLPPLLLGMLGSLAYVAPLFGQDTLPAIEK 76
Query: 61 TVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
T+I + P V+ + I I + A + ++ L + + S+ + + ++ A
Sbjct: 77 TIISTAHSFFSPSVVNEIIEPTIRDITANARGEVVSLGFLISLWAGSSAISSYVDAVVEA 136
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ +R R + ++ V +V + V V P ++ +L I+
Sbjct: 137 HDQTPLRHPVRQRFFALFLYVVMLVFVVATAPVAVVGPRKVSE-----RIPASLANILHY 191
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
G A ++ L +G+I ++ ++ G + +++ + Y+ ++
Sbjct: 192 GYYPALIVGLTLGVIILYRVALPVPLPTHRLVIGAVLATAVFLIATLGLRFYLTWITSTG 251
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L++ + L+F + G ++GAELNA++
Sbjct: 252 YTYGALSTPIAFLLFAFFGGFAIMIGAELNAAIQE 286
>gi|222824215|ref|YP_002575789.1| tRNA-processing ribonuclease BN [Campylobacter lari RM2100]
gi|222539437|gb|ACM64538.1| tRNA-processing ribonuclease BN [Campylobacter lari RM2100]
Length = 270
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/253 (12%), Positives = 87/253 (34%), Gaps = 12/253 (4%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ + +++ A+ +S +LS+ P + + + + + I +
Sbjct: 3 FKNLFKILLALRDKEILNYAAALSFYTILSLIPLLFLCFWVFTQIPSFEMYQERIKNLIF 62
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + + + L I LA A S +N+ + ++
Sbjct: 63 TFLIPTQQELIIQYINTFLKNSVNLGLIGLLAMALTSLAFFSGYDYVINKLLEE-DSKNL 121
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + + L + L + ++ I L + I N +
Sbjct: 122 WHSISSYWTLATLTPLGLGVSFYISGFIQKTL-----------DDFNIALNFFEILPYVI 170
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
++ + + K + ++L + W + ++F +Y V TY +Y + I
Sbjct: 171 IWALFFVSYSSSVSKKGDLKTLLISSFGASVIWYISKMIFVYYAVYNKTYLNVYGSFSVI 230
Query: 249 MTCLVFLYMLGVF 261
+ +++Y+ +
Sbjct: 231 LFFFLWIYISWII 243
>gi|255533166|ref|YP_003093538.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
gi|255346150|gb|ACU05476.1| ribonuclease BN [Pedobacter heparinus DSM 2366]
Length = 306
Score = 78.9 bits (193), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/269 (14%), Positives = 94/269 (34%), Gaps = 10/269 (3%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ F A F + D +A + ++ P ++ L GF + + + +
Sbjct: 10 KLFFIRFSAAFRLFQKNDPLRLAGATAFFTNFALPPILLILIRLFGFFMDRKTLAARLFE 69
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + I + + + + IS + + ++ ++ S+++ + +
Sbjct: 70 RLANILDDDSTGQIRQTLRNIRGIDHQWYATLISFVFFLFVATTLFNVIKNSMDQIWSIG 129
Query: 124 EMRSW-----YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ R S +LLA + ++ AY+ P G L +
Sbjct: 130 KKEHVGFMFTMKLRARSMVIILLAGLLFLVGFLTDSIQAFIGAYINTAAPTFGKFFLSVL 189
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
N ++ ++ ++ + FL + + L G I T + + G + + S
Sbjct: 190 NQLLFIAIVMVW--FTVLFRFLTNGRPTWKAALRGGILTAVLFTFGKYILRILLP-LSGI 246
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAE 267
+Y SI+ ++F++ F GA
Sbjct: 247 GNVYGTSGSIVLIMLFVFYSSFIFYFGAC 275
>gi|296166403|ref|ZP_06848836.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898248|gb|EFG77821.1| ribonuclease BN [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 323
Score = 78.5 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/273 (14%), Positives = 93/273 (34%), Gaps = 18/273 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
++ I ++++ G +++ I+ +S+FP ++ G + G V+
Sbjct: 17 VVIAVIYKYLDDQGGYLSALITYYGFVSLFPLLLLLTTGLGVVLAGHPDLQQQVLHSTLS 76
Query: 69 AWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P I D++ Q + A Y +AL+ +++ + V +
Sbjct: 77 QFP-----VIGDQLHQPAGLSGGTVAVVVGVAGALYGGLGVGQALQNAMDSVWAVPRNKR 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
R +LL + ++ ++ F G + +
Sbjct: 132 PDPLRSRLRSLLLLLVLGSAALAATVLSAAGQATGALGLFG---------KVGVVLVAVG 182
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLA 246
+ + A +LPG + + W + YI T S + A
Sbjct: 183 INALICLVAFRVTTARDLTYRQVLPGALAAAVIWQILQWGGAGYIRHTVKTASATNSVFA 242
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L FL+++ +L AE+N ++ + +
Sbjct: 243 LVLGLLAFLFLVSSTLVLCAEINVVLVERLYPR 275
>gi|148824541|ref|YP_001289295.1| integral membrane protein [Mycobacterium tuberculosis F11]
gi|148723068|gb|ABR07693.1| conserved integral membrane protein [Mycobacterium tuberculosis
F11]
Length = 289
Score = 78.5 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 101/270 (37%), Gaps = 9/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQF 58
+R F + D + A F + +G A+ ++ + ++FP ++ G + GF + +
Sbjct: 13 LRARFGWL-DHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPEL 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T+ + + + + + + D + + + I AA+ + LR +L++
Sbjct: 72 LTTLEERIRTSVSGAVGQQLVDLMNSAIDA-RASVGVIGLATAAWVGLGWMWHLREALSQ 130
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLL 174
+ + Y+ +S ++ + +++ + + P+A P
Sbjct: 131 MWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFD 190
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + ++L ++ ++ LP +++ + + + + + Y+
Sbjct: 191 EIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQI 250
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
S A ++ +VF ++ +
Sbjct: 251 VL-RSPAGAVFGPVLGLMVFAFVTAWLILF 279
>gi|296111656|ref|YP_003622038.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
gi|295833188|gb|ADG41069.1| integral membrane protein [Leuconostoc kimchii IMSNU 11154]
Length = 282
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 5/260 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + LL+VFP ++ A + Q ++ + P I + +
Sbjct: 25 LTRAQINYVGPTFAYYVLLTVFPMLISVAIIISITNVSQT--DLMTAIQSVLPSNIEQIV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
T + VL+ + + S L + S + R+S NR V E S +TR+ SF +
Sbjct: 83 TPILRSVLSSKSTSWLSFSILLTLWTVSRVIAVFRLSFNRIAGVEERISNLLTRVWSFIW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L+ ++ + + + + W + + + +
Sbjct: 143 LLIIIAVFGVLMVGSNILTIVIQQLPDNHWTFFLTHQSHWLIWLGMWLALTLMNYLLPTK 202
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
++ + G + + V FT Y Y ++SI+ L++L ++
Sbjct: 203 ---EGRAPFRFVAIGSLIEVGMLNLLNVGFTWYTKFGLKQYDFYQSMSSIIVVLIWLNLI 259
Query: 259 GVFFILGAELNASMIIYYWR 278
++G L M I
Sbjct: 260 ATVLVIGYVLIQWMTILKNE 279
>gi|42523703|ref|NP_969083.1| RNase BN [Bdellovibrio bacteriovorus HD100]
gi|39575910|emb|CAE80076.1| RNase BN [Bdellovibrio bacteriovorus HD100]
Length = 284
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 86/263 (32%), Gaps = 8/263 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ ++ E F + A+ ++ S+ P ++ + LG ++ V
Sbjct: 6 NFVFTFAERFSDCHTMTWAASVAFYTCFSLAPLVMISLAVVTNLGLE-LQLAFMNEVRSL 64
Query: 70 WPEVIAKPITDEILQVLAVP--AKGLFTISALAAAYFSSNGVEALRISLNRA--YRVVEM 125
A+ + + + + + +R +L ++V E
Sbjct: 65 VGPTAAQAMETVVRNANDRVDLRSLAGLLGTVTLVLSAGLIFGEMRAALTEILGHKVEEE 124
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF--PALGNLLLIIWNGRIY 183
++ I++ L + L + + L + V + + I
Sbjct: 125 ELSFLHATITYLKSRLLQIGLAFGFIFAMMVSLLVTAVLNTVVRVGILEKGGGAFLVNIV 184
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
++L + + FLP + + + T + +V+G + Y+ S+ Y
Sbjct: 185 LSVLVYILLFTGIFHFLPVPRLALRDAFHAGVITALLFVIGKEVVGLYLGGSFITSS-YG 243
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
SI+ L ++Y + +GA
Sbjct: 244 AAGSIVVLLAWVYYSTLIVFIGA 266
>gi|15610471|ref|NP_217852.1| integral membrane protein [Mycobacterium tuberculosis H37Rv]
gi|15842932|ref|NP_337969.1| hypothetical protein MT3439 [Mycobacterium tuberculosis CDC1551]
gi|31794520|ref|NP_857013.1| integral membrane protein [Mycobacterium bovis AF2122/97]
gi|148663199|ref|YP_001284722.1| putative integral membrane protein [Mycobacterium tuberculosis
H37Ra]
gi|167967105|ref|ZP_02549382.1| putative conserved integral membrane protein [Mycobacterium
tuberculosis H37Ra]
gi|215405355|ref|ZP_03417536.1| putative integral membrane protein [Mycobacterium tuberculosis
02_1987]
gi|215413216|ref|ZP_03421917.1| putative integral membrane protein [Mycobacterium tuberculosis
94_M4241A]
gi|215428827|ref|ZP_03426746.1| putative integral membrane protein [Mycobacterium tuberculosis T92]
gi|215432304|ref|ZP_03430223.1| putative integral membrane protein [Mycobacterium tuberculosis
EAS054]
gi|218755122|ref|ZP_03533918.1| putative integral membrane protein [Mycobacterium tuberculosis GM
1503]
gi|219559402|ref|ZP_03538478.1| putative integral membrane protein [Mycobacterium tuberculosis T17]
gi|253800381|ref|YP_003033382.1| hypothetical protein TBMG_03385 [Mycobacterium tuberculosis KZN
1435]
gi|254233947|ref|ZP_04927272.1| hypothetical protein TBCG_03280 [Mycobacterium tuberculosis C]
gi|254365959|ref|ZP_04982004.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|254552443|ref|ZP_05142890.1| hypothetical protein Mtube_18663 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260188388|ref|ZP_05765862.1| hypothetical protein MtubCP_20508 [Mycobacterium tuberculosis
CPHL_A]
gi|260202596|ref|ZP_05770087.1| hypothetical protein MtubT4_21518 [Mycobacterium tuberculosis T46]
gi|260206697|ref|ZP_05774188.1| hypothetical protein MtubK8_20591 [Mycobacterium tuberculosis K85]
gi|289445014|ref|ZP_06434758.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289449028|ref|ZP_06438772.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289555615|ref|ZP_06444825.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289571567|ref|ZP_06451794.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289576063|ref|ZP_06456290.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289747156|ref|ZP_06506534.1| integral membrane protein [Mycobacterium tuberculosis 02_1987]
gi|289752036|ref|ZP_06511414.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289755461|ref|ZP_06514839.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289759485|ref|ZP_06518863.1| integral membrane protein [Mycobacterium tuberculosis T85]
gi|289763527|ref|ZP_06522905.1| conserved integral membrane protein [Mycobacterium tuberculosis GM
1503]
gi|294995896|ref|ZP_06801587.1| hypothetical protein Mtub2_15693 [Mycobacterium tuberculosis 210]
gi|297635993|ref|ZP_06953773.1| hypothetical protein MtubK4_17797 [Mycobacterium tuberculosis KZN
4207]
gi|297732990|ref|ZP_06962108.1| hypothetical protein MtubKR_17952 [Mycobacterium tuberculosis KZN
R506]
gi|298526813|ref|ZP_07014222.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306777667|ref|ZP_07416004.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|306782393|ref|ZP_07420730.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|306786215|ref|ZP_07424537.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|306790583|ref|ZP_07428905.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|306795107|ref|ZP_07433409.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|306799302|ref|ZP_07437604.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|306805149|ref|ZP_07441817.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|306809337|ref|ZP_07446005.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|306969441|ref|ZP_07482102.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|306973787|ref|ZP_07486448.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|307081497|ref|ZP_07490667.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|307086104|ref|ZP_07495217.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|313660322|ref|ZP_07817202.1| hypothetical protein MtubKV_17952 [Mycobacterium tuberculosis KZN
V2475]
gi|2894245|emb|CAA17107.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium
tuberculosis H37Rv]
gi|13883267|gb|AAK47783.1| conserved hypothetical protein [Mycobacterium tuberculosis CDC1551]
gi|31620116|emb|CAD95487.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|124599476|gb|EAY58580.1| hypothetical protein TBCG_03280 [Mycobacterium tuberculosis C]
gi|134151472|gb|EBA43517.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|148507351|gb|ABQ75160.1| putative conserved integral membrane protein [Mycobacterium
tuberculosis H37Ra]
gi|253321884|gb|ACT26487.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289417933|gb|EFD15173.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289421986|gb|EFD19187.1| conserved membrane protein [Mycobacterium tuberculosis CPHL_A]
gi|289440247|gb|EFD22740.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
gi|289540494|gb|EFD45072.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|289545321|gb|EFD48969.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289687684|gb|EFD55172.1| integral membrane protein [Mycobacterium tuberculosis 02_1987]
gi|289692623|gb|EFD60052.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289696048|gb|EFD63477.1| integral membrane protein [Mycobacterium tuberculosis EAS054]
gi|289711033|gb|EFD75049.1| conserved integral membrane protein [Mycobacterium tuberculosis GM
1503]
gi|289715049|gb|EFD79061.1| integral membrane protein [Mycobacterium tuberculosis T85]
gi|298496607|gb|EFI31901.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308214003|gb|EFO73402.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308324942|gb|EFP13793.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308329174|gb|EFP18025.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|308333007|gb|EFP21858.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|308336629|gb|EFP25480.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|308340494|gb|EFP29345.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308344365|gb|EFP33216.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308348303|gb|EFP37154.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|308353027|gb|EFP41878.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308356864|gb|EFP45715.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|308360820|gb|EFP49671.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|308364426|gb|EFP53277.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323718008|gb|EGB27191.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|326905177|gb|EGE52110.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|328460114|gb|AEB05537.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
Length = 289
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 101/270 (37%), Gaps = 9/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQF 58
+R F + D + A F + +G A+ ++ + ++FP ++ G + GF + +
Sbjct: 13 LRARFGWL-DHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPEL 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T+ + + + + + + D + + + I AA+ + LR +L++
Sbjct: 72 LTTLEERIRTSVSGAVGQQLVDLMNSAIDA-RASVGVIGLATAAWVGLGWMWHLREALSQ 130
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLL 174
+ + Y+ +S ++ + +++ + + P+A P
Sbjct: 131 MWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFD 190
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + ++L ++ ++ LP +++ + + + + + Y+
Sbjct: 191 EIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQI 250
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
S A ++ +VF ++ +
Sbjct: 251 VL-RSPAGAVFGPVLGLMVFAFVTAWLILF 279
>gi|121639264|ref|YP_979488.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991761|ref|YP_002646450.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|121494912|emb|CAL73395.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|224774876|dbj|BAH27682.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
Length = 289
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 102/270 (37%), Gaps = 9/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQF 58
+R F + D + A F + +G A+ ++ + ++FP ++ G + GF + +
Sbjct: 13 LRARFGWL-DHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPEL 71
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T+ + + + V+ + + D + + + I AA+ + LR +L++
Sbjct: 72 LTTLEERIRTSVSGVVGQQLVDLMNSAIDA-RASVGVIGLATAAWVGLGWMWHLREALSQ 130
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLL 174
+ + Y+ +S ++ + +++ + + P+A P
Sbjct: 131 MWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFD 190
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + ++L ++ ++ LP +++ + + + + + Y+
Sbjct: 191 EIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQI 250
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
S A ++ +VF ++ +
Sbjct: 251 VL-RSPAGAVFGPVLGLMVFAFVTAWLILF 279
>gi|256825256|ref|YP_003149216.1| hypothetical protein Ksed_14240 [Kytococcus sedentarius DSM 20547]
gi|256688649|gb|ACV06451.1| predicted membrane protein [Kytococcus sedentarius DSM 20547]
Length = 352
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/266 (14%), Positives = 92/266 (34%), Gaps = 9/266 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVVFGA 69
+ A ++ G A ++LSAL+S+ + + + V+D V G
Sbjct: 32 LVRAGRRYLLAHGNVYAGGVTLSALISLVAALTLAVTAFRMVLGRRPELFDRVVDAVNGT 91
Query: 70 WPEVIAKP----ITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+P ++ + V+ +S + ++N + LR+S+ + +
Sbjct: 92 FPGLLGDGDVPGVLTASDLVIDGGLTLATLVSLPVLLWTATNAMTYLRMSVRAMFGLAAA 151
Query: 126 RSWYIT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ +L +LL ++V+ + + A A +V L + + A
Sbjct: 152 PLHPVRAKLWDLVGILLLGSSVVVTAMLSSAATSAARFVLDHAHIDAGTDLTLRIAALAA 211
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + + ++ G + + W V T I + +
Sbjct: 212 AFVVDAVTIALLFRVAAKVRTPWAQRWRGAVLGALGWGALRVAGTSLIGAWDNPLVV--S 269
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
A ++T +V++ + + + A A
Sbjct: 270 FAGLVTLIVWINLAVRWVLFTAAWTA 295
>gi|215447650|ref|ZP_03434402.1| putative integral membrane protein [Mycobacterium tuberculosis T85]
Length = 290
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 101/270 (37%), Gaps = 9/270 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQF 58
+R F + D + A F + +G A+ ++ + ++FP ++ G + GF + +
Sbjct: 14 LRARFGWL-DHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPEL 72
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ T+ + + + + + + D + + + I AA+ + LR +L++
Sbjct: 73 LTTLEERIRTSVSGAVGQQLVDLMNSAIDA-RASVGVIGLATAAWVGLGWMWHLREALSQ 131
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI----PLALAYVRKFFPALGNLL 174
+ + Y+ +S ++ + +++ + + P+A P
Sbjct: 132 MWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRWLEIPQFSVFD 191
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
I + ++L ++ ++ LP +++ + + + + + Y+
Sbjct: 192 EIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFKQVGAIYLQI 251
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
S A ++ +VF ++ +
Sbjct: 252 VL-RSPAGAVFGPVLGLMVFAFVTAWLILF 280
>gi|319955901|ref|YP_004167164.1| ribonuclease bn [Nitratifractor salsuginis DSM 16511]
gi|319418305|gb|ADV45415.1| ribonuclease BN [Nitratifractor salsuginis DSM 16511]
Length = 270
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/266 (13%), Positives = 82/266 (30%), Gaps = 10/266 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
+ I + +E A+ +S S L + PF+V L + + +
Sbjct: 11 YLFIKGFFKELFDERLGFYAASMSWSTLFFIIPFMVILLVLFTHMPIFDTAYGRLHELIA 70
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ A L I + + +N + +
Sbjct: 71 ENLVSSDSKTIMRYIDQFVANADRLGYIGIGYVIIAAILFFKDYDFIVNDIFETPQ---- 126
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ L +F + L IM + + + G L + L
Sbjct: 127 -RSALKAFRTYFFLLLFLPIMLGSSFWLSRTIKGYLEAVGWAGTL-----HVYYIFPYLI 180
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+++ + F P + L + + W + F YI+ TY+++Y GL+++
Sbjct: 181 IWLLFYVAYQFSPRIHISPRAALASSFISSLIWYLAKSGFLFYILYNKTYTSIYGGLSTL 240
Query: 249 MTCLVFLYMLGVFFILGAELNASMII 274
+ +++Y+ F+ G +
Sbjct: 241 LFFFLWIYISWAIFLYGLRFCYILDK 266
>gi|15604851|ref|NP_219635.1| hypothetical protein CT132 [Chlamydia trachomatis D/UW-3/CX]
gi|76788847|ref|YP_327933.1| hypothetical protein CTA_0139 [Chlamydia trachomatis A/HAR-13]
gi|237802562|ref|YP_002887756.1| hypothetical protein JALI_1311 [Chlamydia trachomatis B/Jali20/OT]
gi|237804479|ref|YP_002888633.1| hypothetical protein CTB_1311 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255310933|ref|ZP_05353503.1| hypothetical protein Ctra62_00680 [Chlamydia trachomatis 6276]
gi|255317233|ref|ZP_05358479.1| hypothetical protein Ctra6_00680 [Chlamydia trachomatis 6276s]
gi|255348494|ref|ZP_05380501.1| hypothetical protein Ctra70_00695 [Chlamydia trachomatis 70]
gi|255503036|ref|ZP_05381426.1| hypothetical protein Ctra7_00705 [Chlamydia trachomatis 70s]
gi|255506707|ref|ZP_05382346.1| hypothetical protein CtraD_00700 [Chlamydia trachomatis D(s)2923]
gi|3328531|gb|AAC67723.1| hypothetical protein CT_132 [Chlamydia trachomatis D/UW-3/CX]
gi|76167377|gb|AAX50385.1| ribonuclease BN [Chlamydia trachomatis A/HAR-13]
gi|231272779|emb|CAX09685.1| conserved hypothetical protein [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273796|emb|CAX10579.1| conserved hypothetical protein [Chlamydia trachomatis B/Jali20/OT]
gi|289525174|emb|CBJ14648.1| conserved hypothetical protein [Chlamydia trachomatis Sweden2]
gi|296434721|gb|ADH16899.1| hypothetical protein E150_00700 [Chlamydia trachomatis E/150]
gi|296435648|gb|ADH17822.1| hypothetical protein G9768_00680 [Chlamydia trachomatis G/9768]
gi|296436571|gb|ADH18741.1| hypothetical protein G11222_00685 [Chlamydia trachomatis G/11222]
gi|296437508|gb|ADH19669.1| hypothetical protein G11074_00680 [Chlamydia trachomatis G/11074]
gi|296438439|gb|ADH20592.1| hypothetical protein E11023_00690 [Chlamydia trachomatis E/11023]
gi|297140007|gb|ADH96765.1| hypothetical protein CTG9301_00680 [Chlamydia trachomatis G/9301]
gi|297748261|gb|ADI50807.1| Ribonuclease BN [Chlamydia trachomatis D-EC]
gi|297749141|gb|ADI51819.1| Ribonuclease BN [Chlamydia trachomatis D-LC]
Length = 425
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 87/263 (33%), Gaps = 2/263 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ I A + + A +S L S P +VF L+ +L + +
Sbjct: 19 FIIKSILKAPKVLYHNEASKEACVLSYYGLFSCVPILVFFLRLSQYLFISLDWKEWLLLH 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + I I + S + +++L LN+ + +
Sbjct: 79 FPDYKAPILAIIEAAYS--TTSNIGVVLVSSFFVFCWAGILMLQSLEDGLNKIFCSGITQ 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + L++ + +I+ ++ I L + + + I+
Sbjct: 137 ASLKRLISYLVITLVSPMIFIIVCGSWIYITQILPINYPQLFSFSHSMAFIYIVSRLLPY 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L+ L + FL +K + +W++ +F + YS Y L
Sbjct: 197 ALLYGILFCCYAFLSRVPTKKSAAFFAATIAGSAWILSQKIFFCLQLHLFNYSFTYGALV 256
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
++ + L+ LY+ + ++ G L
Sbjct: 257 ALPSFLLLLYLYAIIYLFGGALT 279
>gi|304570626|ref|YP_830618.2| ribonuclease BN [Arthrobacter sp. FB24]
Length = 366
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 9/267 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
A +H+ + G MA+ I S+ + G +LAG + G + VI + A
Sbjct: 76 MRAFQHYNLQHGPLMAAGIGFRMFFSITGLLATGLSLAGLVLSGQPALLDQVIKSIAKAA 135
Query: 71 PE----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + D + I+A + + + +R + ++
Sbjct: 136 PGLMKVDGGEGLVDPYQLLNPSGLGWAAVIAAAVTVFTALGWISGIRDGVRGMMQLGPRG 195
Query: 127 SWYI-TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYA 184
+ L G +LL V LV+ + + A +V + + + ++
Sbjct: 196 MNPVLQILRDAGILLLLGVALVLSAAASLIFGTAAGWVTEQLQLDPVMAWPLTTAIKVGV 255
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ ++ + + K ++L G I + + V +F+ ++ + + + A
Sbjct: 256 PLALGWVTALIMFRLAAGLKLSRQALLEGTILSAVGTTVLQ-IFSTELLASAGRNPILAP 314
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ L++ ++ +++ A +A
Sbjct: 315 FAIIIGLLIWFNLVSQVYLVSAAWSAV 341
>gi|55378716|ref|YP_136566.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
gi|55231441|gb|AAV46860.1| ribonuclease BN [Haloarcula marismortui ATCC 43049]
Length = 252
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/261 (18%), Positives = 96/261 (36%), Gaps = 17/261 (6%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ ++ +E+ M + I+ A+ S+ P + G T+++++ E
Sbjct: 8 REIVQTARDENVPFMGASIAYYAIASIVPLLALLLAALSTFGG---TVTLLELLRTVLSE 64
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+T+ + A G S + + S +L ++ Y V S
Sbjct: 65 NGQVILTELLENTRGHGATGTL--SLVLVVWSGSKVFRSLSVAFTEVYGEVTDISLPAQL 122
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ S + + +V +S VA+ V A AL +
Sbjct: 123 VRSAVVMGVLLGAVVFLSATSVALTYVKFQVPYP-----------TLVGNVAAFAALGVA 171
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL 252
+ ++ LP K+ + + PG +F W+ V F +Y T Y Y L +++ +
Sbjct: 172 FVPIYYVLPPVKTSLTHVAPGALFAAAGWITIQVGFFYYAGTAGRY-AAYGYLGALLLFV 230
Query: 253 VFLYMLGVFFILGAELNASMI 273
LY+ + +LG +NA++
Sbjct: 231 TALYLAAIVLLLGVVVNATLD 251
>gi|332297717|ref|YP_004439639.1| cyclic nucleotide-binding protein [Treponema brennaborense DSM
12168]
gi|332180820|gb|AEE16508.1| cyclic nucleotide-binding protein [Treponema brennaborense DSM
12168]
Length = 422
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/252 (13%), Positives = 76/252 (30%), Gaps = 1/252 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ F ++ FV D AS + L S+ P I+ A +
Sbjct: 5 KLSFRTFTQTVFLTGSFFVRNDLITYASACAFGFLFSILPVIIMIATILIRFLHASPDIL 64
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
F + + + L+ + + ++ +N +
Sbjct: 65 TNLFNFEDIFAETIDIPEIINSVLSVGGSGIFEIVIGLSIFWMARRFFNSVMQGVNCIFH 124
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
I++LIS +L V + ++ F+F L+ + I
Sbjct: 125 TEAKSQPLISQLISLAGEVLIVVAVAVLIFLFTTGQSILSSSFLTSFIPQFFVRITALLL 184
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ +F+ + K + +VV ++F ++ + Y+ +
Sbjct: 185 KFIPAGLMFLFVTVSFRVASGTKPPWLLCTIASGLCTAVFVVFQLIFAAFVD-MTKYNLI 243
Query: 242 YAGLASIMTCLV 253
Y L++ + L+
Sbjct: 244 YGVLSNSIVLLL 255
>gi|288916243|ref|ZP_06410623.1| ribonuclease BN [Frankia sp. EUN1f]
gi|288352434|gb|EFC86631.1| ribonuclease BN [Frankia sp. EUN1f]
Length = 534
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/268 (14%), Positives = 91/268 (33%), Gaps = 11/268 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F E+ G +A+ I+ LS+FP ++ GF+ G V+ +P
Sbjct: 23 VVYKFTEDQGGYLAALIAFYGFLSLFPLLLLLTTCLGFVLAGHPDLQEQVVSSALSQFPI 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + D + I + + S A+ +L+ + V +R
Sbjct: 83 IGDQLRNDV---HALRGSAAAVAIGLFGSIWGSLGVARAVGNALDTVWAVPR-----RSR 134
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
F + + + ++ + + A + L + + + ++
Sbjct: 135 PNPFFARVRSFGLIGLLGLGVLLTTVLSAITTRASDLGTGLGVGLQVLAVVLGLVGNTGL 194
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTC 251
++ L +LPG + W + T+ + + +Y A ++
Sbjct: 195 VLVAFQLLTVKDVSFRQVLPGAAVAAVGWQLLQSAGTYLLQYQLQGRTQVYGLFALVLGL 254
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +LY+L V + E+N + + +
Sbjct: 255 VTWLYLLAVVIVFAMEINTVRVGRLYPR 282
>gi|225850322|ref|YP_002730556.1| hypothetical protein PERMA_0768 [Persephonella marina EX-H1]
gi|225646295|gb|ACO04481.1| putative membrane protein [Persephonella marina EX-H1]
Length = 303
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 50/276 (18%), Positives = 96/276 (34%), Gaps = 14/276 (5%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ + F Y A + + ++ IS L+S FP +V L FL +
Sbjct: 19 KPFLKNFFSSFYRAFLDYFKVGFGYHSAAISYFTLMSFFPLLVVLTVLISFLADIN-IQI 77
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+++V+ +P V + + +L L+ I + A YF++ +L +L +
Sbjct: 78 ILEVLQRFFPSVTQEFLD--LLVTLSSKRAFFGIIGTVIAFYFATGIFTSLHEALVYVFD 135
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA-----------LAYVRKFFPAL 170
E+ + FG + ++I V + L +
Sbjct: 136 GREVSIKKTAFVYIFGIPVFTVALIIIYIIGLVISSVLETVKSFALWKYLEEIFDVVHLK 195
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
L + + I + P K + ++L IF + + F
Sbjct: 196 FLLDTATNITNVVHYITFFIIIFLIYRYLTPLIKVNMRNVLWSTIFISLILFLLKTGFNS 255
Query: 231 YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
YI+ S + +Y L+ I L +LYM ++GA
Sbjct: 256 YIILASKTNPIYGTLSGIFAFLAWLYMSFGAILIGA 291
>gi|254441587|ref|ZP_05055080.1| Ribonuclease BN-like family [Octadecabacter antarcticus 307]
gi|198251665|gb|EDY75980.1| Ribonuclease BN-like family [Octadecabacter antarcticus 307]
Length = 254
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 88/215 (40%), Gaps = 9/215 (4%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVID 64
+ F++ ++ E++ +++ ++ L ++FP I +L G V T +D
Sbjct: 3 WRSAFEVARQVLDDLSEKNAGLISAGVAFYGLFAIFPGIAATISLFGIFADPVVVETQLD 62
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL---AAAYFSSNGVEALRISLNRAYR 121
++ G PE + +I +L+ + L + + A + + GV AL LN +
Sbjct: 63 LMAGLMPEGVFVLFQTQIDGLLSAGSATLGLTTLVSIGLALWSARTGVAALIRGLNAIFD 122
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
R ++ + ++ + V P+ LA + P + +++ R
Sbjct: 123 -RPNRGSIRHIFVALLLTICLVGIAIVALLMVVVAPIFLAVI----PFETDQAVLLELVR 177
Query: 182 IYATMLALFIGLIFVHLFLPAAK-SKIMSILPGVI 215
+ LFIGL ++ + P + +++ + PG
Sbjct: 178 WSLVIAVLFIGLGLLYRYGPNRRYARMGWVTPGAR 212
>gi|159036400|ref|YP_001535653.1| ribonuclease BN [Salinispora arenicola CNS-205]
gi|157915235|gb|ABV96662.1| ribonuclease BN [Salinispora arenicola CNS-205]
Length = 307
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/271 (15%), Positives = 95/271 (35%), Gaps = 17/271 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD ++ AI + +A+ I+ ++F + ++ G + G + D
Sbjct: 25 FDHVWRAILLYNGRFATRLAAAIAYYGFFAMFALALVAYSVFGAILEGNDEVNAATADFF 84
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVEM 125
P + I + + + + + VEA+R S Y +
Sbjct: 85 RENLPFLDPVQIAE--------SSGAVGAAGLTILVFTGISWVEAIRSSQRSLYGLDQQP 136
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + RLI G +L+ V L + + L ++ + + +
Sbjct: 137 GNLVVRRLIDLGVLLVVFVLLGVSVAAVDTLESLLRWLLQSAG-----SAGLTTISALLS 191
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + + +P + + + P V+ + + + HY+V + + Y +
Sbjct: 192 VLVNAVLATLLLAAVPRLRPSRVRLRPAVLLVAVGITLLNTIGRHYVVR-TERNPAYTVV 250
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
A + L++LY+ + GA L A+
Sbjct: 251 AGAVGLLLYLYLFNQLVLFGAALVATNRRGR 281
>gi|254432477|ref|ZP_05046180.1| YihY family protein [Cyanobium sp. PCC 7001]
gi|197626930|gb|EDY39489.1| YihY family protein [Cyanobium sp. PCC 7001]
Length = 328
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 19/290 (6%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVP 60
+ A++ + D +++ + A+ SVFP ++ +LA + +
Sbjct: 30 RRPWRPLRVFLRALKLWFRHDCVDLSAAFAYHAMQSVFPIVLIALSLAARVLGQDEGLLD 89
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V+ P +T + L + +SN L+ +R +
Sbjct: 90 RVLSGARQVLPGSAMPAVTTGLNAFLRQGVGAGLLGVLVLVL-TASNAYLTLQRGADRLW 148
Query: 121 RVVE---------------MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
R + L+ + + S+ P + +
Sbjct: 149 WNRPFGLDGLPWHQVVLRYCRLRLKALALMALMALVIVLDRLATSWRLPGAPTVGEVLPR 208
Query: 166 FFPALGNLLLIIWNGRIYATMLAL-FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVG 224
FP + +L +G T L + + + LP+ + + +LPG F ++ +
Sbjct: 209 IFPRVVDLGRPFNSGLDLLTTLGFSLLAALLLLWMLPSRRVSLRHLLPGAAFLAGAFTLL 268
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+L +V Y + ++ ++++M+GV L+ +
Sbjct: 269 NLLLGRVLVLLGVRFQAYGLVGGVLVFGLWVWMIGVLIYYSQCLSVVLSR 318
>gi|126736678|ref|ZP_01752417.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
gi|126713793|gb|EBA10665.1| ribonuclease BN, putative [Roseobacter sp. CCS2]
Length = 188
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 6/181 (3%)
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+S A + GV AL LN + L+ +V LV ++ V +
Sbjct: 1 MSIALALWSCRAGVGALIGGLNAIAG-----QRMRNGIWQMAVALMLTVALVSLAIVALT 55
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGV 214
+ + + F P + ++ R + L GL ++ F PA S+ I G
Sbjct: 56 VVVIVPIGLAFIPVANSTAWLLEGIRWLVALGVLMTGLSLLYRFGPARIGSRGRWITVGA 115
Query: 215 IFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ WV + ++Y+ F++Y+ +Y + +++ L++LY+ +LGA LN +
Sbjct: 116 FAVVVLWVAASAGLSYYLTNFASYNEVYGSIGAVIGLLLWLYVSAYLILLGAALNVEVHG 175
Query: 275 Y 275
Y
Sbjct: 176 Y 176
>gi|166154353|ref|YP_001654471.1| hypothetical protein CTL0387 [Chlamydia trachomatis 434/Bu]
gi|166155228|ref|YP_001653483.1| hypothetical protein CTLon_0383 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335606|ref|ZP_07223850.1| hypothetical protein CtraL_02205 [Chlamydia trachomatis L2tet1]
gi|165930341|emb|CAP03827.1| conserved hypothetical protein [Chlamydia trachomatis 434/Bu]
gi|165931216|emb|CAP06781.1| conserved hypothetical protein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 425
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 86/263 (32%), Gaps = 2/263 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ I A + A +S L S P +VF L+ +L + +
Sbjct: 19 FIIKSILKAPKVLYHNGASKEACVLSYYGLFSCVPILVFFLRLSQYLFISLDWKEWLLLH 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + I I + S + +++L LN+ + +
Sbjct: 79 FPDYKAPILAIIEAAYS--TTSNIGVVLVSSFFVFCWAGILMLQSLEDGLNKIFCSGITQ 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + L++ + +I+ ++ I L + + + I+
Sbjct: 137 ASLKRLISYLVITLVSPMIFIIVCGSWIYITQILPINYPQLFSFSHSMAFIYIVSRLLPY 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L+ L + FL +K + +W++ +F + YS Y L
Sbjct: 197 ALLYGILFCCYAFLSRVPTKKSAAFFAATIAGSAWILSQKIFFCLQLHLFNYSFTYGALV 256
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
++ + L+ LY+ + ++ G L
Sbjct: 257 ALPSFLLLLYLYAIIYLFGGALT 279
>gi|224373034|ref|YP_002607406.1| ribonuclease BN [Nautilia profundicola AmH]
gi|223588583|gb|ACM92319.1| ribonuclease BN [Nautilia profundicola AmH]
Length = 266
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/254 (12%), Positives = 89/254 (35%), Gaps = 13/254 (5%)
Query: 22 EDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVVFGAWPEVIAKPITD 80
+ ++ +S + S+ P I+ + +F + + + I+
Sbjct: 23 NEITLYSAALSFYTIFSLVPLILIVLTIFANTPFFAEFYSKLEHFISSNLLPTNQEVIST 82
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ L +K + + + S + + + + E R+ + + + +
Sbjct: 83 YLKNFLTNSSK-MGVMGGFYILFTSILFFDNYETIIAKIFS-QEKRNLWEKIKLYWTMLT 140
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
L + F+ + + F + N A L +++ F+ +
Sbjct: 141 LFPIMFAAAMFMSIKLQ---------FFLDKSSYTSWINFAKLAPFLIIWLTF-FLSYKM 190
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
K S L + ++ V +F +Y++ TY+T+Y ++ +M +++Y+ V
Sbjct: 191 TLQNEKTKSALIASLMVTATFFVSKNIFIYYVLINKTYTTIYGSISLLMFLFLWIYINWV 250
Query: 261 FFILGAELNASMII 274
++ G + +
Sbjct: 251 IYVAGIYIIKYLDE 264
>gi|29840307|ref|NP_829413.1| ribonuclease BN family protein [Chlamydophila caviae GPIC]
gi|29834656|gb|AAP05291.1| ribonuclease BN family protein [Chlamydophila caviae GPIC]
Length = 430
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 91/263 (34%), Gaps = 1/263 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ A + V+ + A +S L S P +VF L+ L A+ + V
Sbjct: 23 RIIRSFLLAPQVLVKNEVSKEACVLSYYGLFSCIPILVFFLRLSQHLFANLDWKEWLLVR 82
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F + E I + + S + + +L LN+ +R
Sbjct: 83 FPDYKEPILAIVAAA-HNATTSNIGLVLVGSFFVFCWAGILMLLSLEDGLNKIFRTGWTP 141
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ F L++ + +I+ ++ I + +L + + I++
Sbjct: 142 ISVQRLIAYFIITLVSPMIFIIVCGSWIYITQIMPVAYAKLFSLSHSITILYVFSRLTPY 201
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L +++ L + FLP + + L + W+ +F YS Y L
Sbjct: 202 LFIYLALFCCYAFLPRVSVQKTAALIAALTAGTLWIFFQKVFFCLQFYLFNYSFTYGALV 261
Query: 247 SIMTCLVFLYMLGVFFILGAELN 269
++ + L+ LY+ + ++ G
Sbjct: 262 ALPSFLLLLYLYAMLYLFGGAFT 284
>gi|78486113|ref|YP_392038.1| ribonuclease BN, putative [Thiomicrospira crunogena XCL-2]
gi|78364399|gb|ABB42364.1| tRNA-processing RNAse BN [Thiomicrospira crunogena XCL-2]
Length = 280
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 104/272 (38%), Gaps = 9/272 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
A ++F++++G + ++ ++L+ + PF+ ++ G+ V T +
Sbjct: 11 QFWVQASQNFIKKEGLDAVTVLAYASLVGLVPFLTIIFSVFSMSGSFDSVQTDVMDKIMH 70
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + P + L+ + A+ L + + + + + + +N + R+W+
Sbjct: 71 YLLPESTPKVEFYLRQFSEKARELQGVGIMVMLFIALILLWTVDKKINLMWSKHLQRTWW 130
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ L G ++ + L + + + +L A +L
Sbjct: 131 VSLLRYLGVSIIGPILLGFSLVLNSML---------MAGPIFPVLQEQTWALNQAPVLIN 181
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+G F++ F+P K+ G + + + LF+ Y+ F T S +Y A I
Sbjct: 182 ILGFAFIYHFVPIHPVKVSYAFIGALLASLELELLKFLFSFYVDWFPTVSIVYGAFAVIP 241
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
L +LY+L I A + + + P
Sbjct: 242 LFLFWLYLLWFVIIFNASVVHQLTLERGPMLP 273
>gi|32473153|ref|NP_866147.1| serum resistance protein brkB [Rhodopirellula baltica SH 1]
gi|32397832|emb|CAD73833.1| probable serum resistance protein brkB [Rhodopirellula baltica SH
1]
Length = 326
Score = 76.6 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 20/284 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---------GAHQFVPT 61
+ F ++ +A+ ++ ++ P + + F +
Sbjct: 21 FLKQVFSEFSKDRCSTLAAALAYYTAFALPPLLYLMMTVLTFSLSVMYDSEQATEKAQGI 80
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA--AYFSSNGVEALRISLNRA 119
+ A + I++ + + A ++ V AL+ +LN+
Sbjct: 81 LQTQASQMIGNPAAVEQIETIMENHEQTSGKWWKTLLSFAGILVGATGVVSALQAALNQV 140
Query: 120 YRVVEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V R +SFG +L L++ V + V + +
Sbjct: 141 WEVKPDPENSGIKDMIAKRFLSFGMILGLGFLLLVSLVVSSVLTALGDQVGGWIGMSETV 200
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ L +F+ + F+P A +K + G T I ++VG Y
Sbjct: 201 AHLANFA---VQALVVFVIFASIFKFMPDAITKWRDVAVGAAVTTILFLVGRYAMQLYFS 257
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ + A AS+ LV++Y + +LGAE + Y
Sbjct: 258 MSEPGAQLGAAAASLAVLLVWVYYTAMIVLLGAEATQVYAVRYG 301
>gi|330004638|ref|ZP_08305005.1| tRNA-processing ribonuclease BN domain protein [Klebsiella sp. MS
92-3]
gi|328536553|gb|EGF62887.1| tRNA-processing ribonuclease BN domain protein [Klebsiella sp. MS
92-3]
Length = 141
Score = 76.2 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 50/123 (40%)
Query: 157 PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
LA++ +L +I N ++ + ++ +P + + + G +
Sbjct: 12 SLAISSYLLSLRWASDLDGVIDNLLRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALV 71
Query: 217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ + G F YI TF +Y +Y ++ + V++Y +LGAE+ ++ Y
Sbjct: 72 AALLFEAGKKAFALYITTFPSYQLIYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYR 131
Query: 277 WRK 279
K
Sbjct: 132 KLK 134
>gi|332671377|ref|YP_004454385.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
gi|332340415|gb|AEE46998.1| ribonuclease BN [Cellulomonas fimi ATCC 484]
Length = 330
Score = 76.2 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/263 (15%), Positives = 91/263 (34%), Gaps = 9/263 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGAWP 71
A F G ++ I+ +AL SVF + G + V+D + P
Sbjct: 54 RANARFGAAGGALLSGGIAYAALFSVFAGLTIGYTAFMAVLGDDAALRQQVLDAIDQTLP 113
Query: 72 E----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ D VL+ ++ + + + ALR + + V +
Sbjct: 114 GLIDTGENDGLVDPATLVLSPALTVAGVVALVVLVLSAISATAALRTGVRAMFGRVSGDN 173
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+++L G + ++ +++ + + A A ++ ++ + +
Sbjct: 174 AVLSKLREVGGFVGIALAVLLSAVLTTAATAAARWLTGLLGWTAGPGTVVAAL---VSFV 230
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ V FL + + G + +L T + + +T + + A A
Sbjct: 231 VDAGMFLLVVWFLAGQRPAWRDLRGGALIAATGMGAVRLLGTSVVASSATRNPLLASFAV 290
Query: 248 IMTCLVFLYMLGVFFILGAELNA 270
++T LV++ +L +L A A
Sbjct: 291 VVTLLVWVNLLARIVLLAAAWTA 313
>gi|291448672|ref|ZP_06588062.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
gi|291351619|gb|EFE78523.1| integral membrane protein [Streptomyces roseosporus NRRL 15998]
Length = 306
Score = 76.2 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 83/247 (33%), Gaps = 14/247 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ D + +E +A+ + LLS+ P ++ L G++ TV +
Sbjct: 2 LKDTVNSCIEYRILGLAAEAAFFTLLSLPPLLLGMIGLLGYVDEWTTTTTVASIERNILS 61
Query: 72 EVIA--------KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ V + +I A + S V ++ Y +
Sbjct: 62 ASQTVLSERGVNDFAKPLLADVTTGARPDVISIGFAIALWSGSRAVNVFIDTITVMYGLD 121
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R TRL++F ++A + ++ + V P + + +I
Sbjct: 122 GHRGIVKTRLLAFLLYVVALLLGAVVLPLLVVGP------DRVVEFVPWGTEVIAVLYWP 175
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L ++ +S + +PG + WV+G+ L Y+ T+Y
Sbjct: 176 LVILLTIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTNTVEGPTIYG 235
Query: 244 GLASIMT 250
LA+ +
Sbjct: 236 SLAAPIA 242
>gi|293453827|ref|ZP_06664246.1| ribonuclease [Escherichia coli B088]
gi|291321953|gb|EFE61384.1| ribonuclease [Escherichia coli B088]
Length = 257
Score = 76.2 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 81/253 (32%), Gaps = 11/253 (4%)
Query: 39 VFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
+ P ++ GF+ + + D + + + + +
Sbjct: 1 MIPILMVSFAAGGFVLASHPMLLQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLV 60
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITRLISFGYVLLASVTLVIMS 150
A Y N + LR ++ R V R +++ L F ++ + L++
Sbjct: 61 GLAVALYSGINWMGNLREAIRAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTL 120
Query: 151 FVFVAIPLALAYVRKFFPA--LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
+ A + + L + ++ A ++ ++ LP + +
Sbjct: 121 SITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKK 180
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
+++ G I + V ++ T+ + + S A S++ + F Y + A
Sbjct: 181 ALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SPSGAAFGSVLGLMAFFYFFARLTLFCAAW 239
Query: 269 NASMIIYYWRKKP 281
A+ + P
Sbjct: 240 IATAEYKDDPRMP 252
>gi|153951615|ref|YP_001397697.1| YihY family protein [Campylobacter jejuni subsp. doylei 269.97]
gi|152939061|gb|ABS43802.1| YihY family protein [Campylobacter jejuni subsp. doylei 269.97]
Length = 276
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 98/268 (36%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V A+ + + + + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLVAMAFTSLAFFSGYDFVINRIT 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ E + + + + + L + L + ++ I L + F
Sbjct: 113 K-NEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNFFE--------- 162
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ GL F K + S+ W +G LF +Y+V TY++
Sbjct: 163 ---ILPFVIIWGLFFTSYSSSVHKGTLKSLALVSFGAGAIWYIGKNLFVYYVVYNKTYAS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ + ++ G +L
Sbjct: 220 VYGSFSTILFFFIWIYISWIIYLFGLKL 247
>gi|47459210|ref|YP_016072.1| hypothetical protein MMOB3750 [Mycoplasma mobile 163K]
gi|47458539|gb|AAT27861.1| conserved hypothetical membrane protein [Mycoplasma mobile 163K]
Length = 365
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 96/272 (35%), Gaps = 4/272 (1%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ + + ++ + + ++L ++ P + ++ F +F + + G
Sbjct: 83 ELVDNTYKKIQSKEFAFIPAGLALYLFMAFIPILTIVFSVFSF--NLEFTEILRTDILGR 140
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA-AYFSSNGVEALRISLNRAYRVVEMRSW 128
I I + + I LA+ + SSNG S + Y + +
Sbjct: 141 LIPGIESSIPAIQEFFQSSTVGTVALIILLASSFWLSSNGFVKFIKSESLIYNFQNIENN 200
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I R+ VL SV + ++ V + I L + I + + +
Sbjct: 201 LILRIKGILIVLGLSVFMSLVLLVVIPIVKILKE-NLLIQSPTTFFAIFYILSFILIIFS 259
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
++ + + P+ K K + PG I T I + V+F + + +
Sbjct: 260 SYVAFLLLFKLSPSFKLKFKDVSPGAIVTTIPTSLFIVIFGSLSSIDLINYGNFGTIGTF 319
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M ++ + L + G +NA+ + KK
Sbjct: 320 MFLVILILQLSFYLYAGLIINAAYYQTFVGKK 351
>gi|118475249|ref|YP_891867.1| ribonuclease BN [Campylobacter fetus subsp. fetus 82-40]
gi|118414475|gb|ABK82895.1| ribonuclease BN [Campylobacter fetus subsp. fetus 82-40]
Length = 266
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/275 (14%), Positives = 101/275 (36%), Gaps = 14/275 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVID 64
+++ + + ++ A+ +S LLS+ P + ++ L + + + D
Sbjct: 2 RKIWEKLVLIYKVLEDKQLLHFAASLSFHTLLSIIPVLFISLSIFTQLPSFSGYYAKIKD 61
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F + IT+ I Q L+ + I L A +F+S + + +
Sbjct: 62 FIFSNLLPS--QSITEYIDQFLSNSSS--LGIIGLIAVFFTSIMFFSDYEFVISKLTGAK 117
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R ++ + + + L + L + ++ I L+ N
Sbjct: 118 SRGFWRSLSNYWTLITLMPLGLGMSFWLSNLIQTMLSQSEYTSGI---------NFLAIF 168
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ ++ +L I +IL + ++W + +F Y TYS++Y
Sbjct: 169 PYIIIWAIFAVTYLISINRDFSIKNILISSFASSLAWSISKWIFVGYSFYNKTYSSIYGS 228
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++ +++Y+ + F+ G +L ++ K
Sbjct: 229 FSILLFFFIWIYISWIIFLYGIKLCVALDGLSRDK 263
>gi|6900344|emb|CAB71957.1| hypothetical protein [Neisseria meningitidis]
Length = 316
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 69/193 (35%), Gaps = 7/193 (3%)
Query: 86 LAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
A L I ++ S + + + NR +RV R W + L+ + + ++
Sbjct: 1 FREQANRLTAIGSVMLVVTSRMVIRTIDNTFNRIWRVNSQRPWMMQFLVYWASLTFGPLS 60
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
L + V + R AT+ + + L ++ F+P
Sbjct: 61 LGVGISFMVG-------SVQDAALASGAPQWSGALRTAATLTFMTLLLWGLYRFVPNRFV 113
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
G + T LFT Y+ F Y ++Y A++ L++L +L + G
Sbjct: 114 PARQAFVGALATAFCLETARSLFTWYMGNFDGYRSIYGAFAAVPFFLLWLNLLWTLVLGG 173
Query: 266 AELNASMIIYYWR 278
A L +S+ +
Sbjct: 174 AVLTSSLSYWQGE 186
>gi|301167284|emb|CBW26866.1| putative ribonuclease [Bacteriovorax marinus SJ]
Length = 308
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/277 (14%), Positives = 94/277 (33%), Gaps = 11/277 (3%)
Query: 2 REYFCIVFDIIYDAIEH---FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ- 57
++ + + ++ ++ F G +A + LLS P ++ N+ G + A
Sbjct: 16 KKSYDLTKSVLLRLVQGLVLFKRRKGEVIAGASTFFTLLSFAPALLLFINMVGLIIADNA 75
Query: 58 -FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE-ALRIS 115
V+ VV ++P+V + V + +A F+S G+ ++
Sbjct: 76 GARDYVMRVVLESFPKVDSWIYNGIESVVNSQLHDSGLDFLKVAFLIFASMGISTSIVFG 135
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
+N +V L SF + ++ + + V +
Sbjct: 136 INILSKVDPDGGLLEDDLRSFFTGIGITIYM----VLLVCVGHKGPVQEILQSFSWGRGF 191
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+I + + + + + + P+ K G + +++G + Y+ F
Sbjct: 192 VILFDNSFISSILSLLFFSLFYKYCPSIKVATKDAFRGGATFVLCFLIGRSTYWIYVKYF 251
Query: 236 S-TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
Y + M L+++Y L F GA + +
Sbjct: 252 KDDLVADYGQFTNFMIALIWIYFLMSCFYYGASVAYA 288
>gi|284992777|ref|YP_003411331.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284066022|gb|ADB76960.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 343
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 95/277 (34%), Gaps = 8/277 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQF 58
+R FD + A + G MA+ ++ L + P ++ A++ G + G
Sbjct: 40 LRRRLPW-FDHLARAGGRYQRTQGDLMAAGVTYFVFLGLVPVLLLVASVIGLVLAGNALL 98
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + +P I E+ + Y ++ LR+ + R
Sbjct: 99 QQELYATIRETFPGPTGAEIVGELRGAVGSAGVVGVIGLVGF-FYAGLRAMDKLRLGMER 157
Query: 119 -AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL--GNLLL 175
V+ + L + + ++ + + A ++ + L L
Sbjct: 158 IWKGRVDDPEFLRDNLQDLLALAAFGLAGLLSLGLTGGVTQATSWALQALGLDDAPGLFL 217
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + ++ + +++ +P+ + +LPG +F + ++ + Y+
Sbjct: 218 LTAALGLGLAVVTDVVVFLWLLRVVPSTSYPLRRLLPGALFGAAGFEAMKLIGSLYLSLI 277
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
S S + + L+++ ++ F A A++
Sbjct: 278 SG-SVTASAFGGAVGILIWINVVCRFAFFTAAWTATL 313
>gi|298244678|ref|ZP_06968484.1| ribonuclease BN [Ktedonobacter racemifer DSM 44963]
gi|297552159|gb|EFH86024.1| ribonuclease BN [Ktedonobacter racemifer DSM 44963]
Length = 360
Score = 76.2 bits (186), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/238 (18%), Positives = 87/238 (36%), Gaps = 9/238 (3%)
Query: 37 LSVFP----FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG 92
L++FP + + GF+G +V + + + L +
Sbjct: 42 LAIFPVLVALLSLLGLVFGFMGGDSTKSVTNMMVSALPSVTNPQGVVQGVQSNLKASSGI 101
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
L I+ ++A + L + Y V R +I+ +L + + +MS
Sbjct: 102 LGVIAVVSAILVGARLFALLETFFSIVYHV-RPRPIVRRMVIAIAVFILFILLVPVMSLA 160
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
L + ++ LG+ + +LA F+ + +++ +P ++
Sbjct: 161 ASIPVLVASVLQATT--LGHFAFLTTAAGFLGGVLAAFLLFLAIYVIVPNLHIRLRHGWK 218
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
G I + ++ + VLF Y+ F + + LVF Y V LGAE+NA
Sbjct: 219 GAIVSAVALQLYLVLFPLYVAHFLKGAV--GAVGFAAILLVFFYYFAVLLFLGAEVNA 274
>gi|317050450|ref|YP_004111566.1| ribonuclease BN [Desulfurispirillum indicum S5]
gi|316945534|gb|ADU65010.1| ribonuclease BN [Desulfurispirillum indicum S5]
Length = 280
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 78/247 (31%), Gaps = 10/247 (4%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + A+ +S + + P ++ ++ L + + +
Sbjct: 26 FFDAELGYSAASLSFYTIFAFIPLLLIALSVTTRLPGFS---DQLADLREFLMGYLLPTN 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
D + + + A Y + + + + A R+ RS + S
Sbjct: 83 VDAAAHFFESFLGDISRLGIMGALYVIATSILFFKNYQHIASRIF--RSETRSFWESLTT 140
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+ I + + P L L L I A + I V
Sbjct: 141 YWTLMTLMPIGLALSLYFTTTAQVTLARNPFLQGLDLAI-----VAPYAIAWAAFIIVFR 195
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
++ + + T ++W + LF Y V Y+T+Y + ++ L+++Y+
Sbjct: 196 ISANKPIQLKNAAISALVTSLAWNITKELFVAYAVINKAYTTIYGSFSILLLLLLWVYVS 255
Query: 259 GVFFILG 265
V + G
Sbjct: 256 WVIVLYG 262
>gi|213584053|ref|ZP_03365879.1| hypothetical protein SentesTyph_23670 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 181
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 42/134 (31%), Gaps = 3/134 (2%)
Query: 1 MREYFC-IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQ 57
M++ + + A E F + G + I+ + LS+ P ++ AGF+
Sbjct: 47 MQKIQRQPMVAHLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFILASHPN 106
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
+ + + + + + + A Y N + LR ++
Sbjct: 107 LLEDIFSKILMNVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIR 166
Query: 118 RAYRVVEMRSWYIT 131
R V R
Sbjct: 167 AQSRDVWERKPQDQ 180
>gi|302555002|ref|ZP_07307344.1| LOW QUALITY PROTEIN: integral membrane protein [Streptomyces
viridochromogenes DSM 40736]
gi|302472620|gb|EFL35713.1| LOW QUALITY PROTEIN: integral membrane protein [Streptomyces
viridochromogenes DSM 40736]
Length = 241
Score = 75.8 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R TRL++F ++A + + + VA P A+ + + ++
Sbjct: 8 RGIVKTRLLAFLLFIVALLIGSVALPLMVAGPDAVVRIVPW------STTVVQVLYWPVV 61
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L L ++ +S + +PG + WV+G+ L Y+ + T+Y L
Sbjct: 62 ILLSIAFLTTLYHVSVPVRSPWIEDVPGALVALGMWVLGSFLLRIYLTSTVEGPTIYGSL 121
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMII 274
A+ + L+++ + ++GA +NA++
Sbjct: 122 AAPVAVLLWIGVSAFAVLVGAAVNAAIDR 150
>gi|91773378|ref|YP_566070.1| ribonuclease BN [Methanococcoides burtonii DSM 6242]
gi|91712393|gb|ABE52320.1| Ribonuclease BN [Methanococcoides burtonii DSM 6242]
Length = 320
Score = 75.8 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 11/272 (4%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TV 62
+ + D+ I+ ++ +DG + ++ +S +LS+ ++F ++L G + + T+
Sbjct: 44 FMGKLKDVALQTIKRWIADDGTSFSAALSFYLILSLPSLLLFSSSLGGMFLKVELLQATI 103
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYR 121
ID + E I Q+ + IS L + + N + +++ +
Sbjct: 104 IDYISPFADEEIINSFNLLFHQLPETSSLTFGLIISFLLFLWSAGNIFLQFQKTIDHMWG 163
Query: 122 VVEMRSWYITRLI-----SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
V++ + + RL SF V + S+ L+I + + + + P L+
Sbjct: 164 VLDSKKGWSQRLFKKRISSFVAVFIFSLLLIISILAEIFLVVISNMLTIIHPLPLELMQY 223
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
I + T L I++++ LP K KI I G T +G LF+ YI S
Sbjct: 224 ISSI---VTFFVLIFFFIYLYMALPDKKVKIKYIGIGSFLTVFFITLGKHLFSLYISY-S 279
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++T+Y + + + +++Y + L AE
Sbjct: 280 NFTTVYTKIGAFLAIFLWMYYSSIIVTLMAEF 311
>gi|170078320|ref|YP_001734958.1| ribonuclease BN-like family protein [Synechococcus sp. PCC 7002]
gi|169885989|gb|ACA99702.1| Ribonuclease BN-like family [Synechococcus sp. PCC 7002]
Length = 399
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/232 (13%), Positives = 87/232 (37%), Gaps = 7/232 (3%)
Query: 50 AGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAY------ 103
A + + + ++F ++ ++ + L ++ ++ L +
Sbjct: 140 AKLMSIFITLGAIALLIFASFLVLVGDSVIKVGLDLIVRLPVDTTGVNVLVTLWRLLSFP 199
Query: 104 -FSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
G + + +N + R +++A + + F + I +
Sbjct: 200 LALGLGTGIIAMVINILTSPPDRRHPLRKLKQMSFGLVIALIAFFALCFSILFIQNLIVD 259
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
+ + L+++ + + + I F++ + K M ILPG + +SW
Sbjct: 260 MEINYDLANLLVILWRFLSLPVALAIVSIAFAFIYSMGSSRLIKGMPILPGAVLGAVSWA 319
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ + LF Y+ F Y+ +Y + + + +++L + + +LG +LN +
Sbjct: 320 IISSLFRLYVANFGQYNRVYGAVGTAIILMLWLQLSALVMLLGDQLNVVVGE 371
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/204 (16%), Positives = 76/204 (37%), Gaps = 9/204 (4%)
Query: 1 MREYFCIVF----DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--- 53
M+ + +Y I + +++ I+ + +LS+FP I+ G
Sbjct: 1 MKRFLRFFLFLNHRTLYWTIRQALRRRLLGLSAEIAFNVMLSLFPTIIMALTALGLFTAT 60
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
+Q + + P + + + ++ P+K LF++S +A + SS + A
Sbjct: 61 LDNQTILQLASYYEDVMPVSVWTLLREFAAEISKTPSKSLFSVSFVATIWVSSGALSAAM 120
Query: 114 ISLNRAYRVVE--MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+L++ + + R ++ +L+S L A L+ SF+ + + L
Sbjct: 121 NALDQIHEIPPEQRRPFWKAKLMSIFITLGAIALLIFASFLVLVGDSVIKVGLDLIVRLP 180
Query: 172 NLLLIIWNGRIYATMLALFIGLIF 195
+ +L+ + L
Sbjct: 181 VDTTGVNVLVTLWRLLSFPLALGL 204
>gi|327537866|gb|EGF24568.1| ribonuclease BN [Rhodopirellula baltica WH47]
Length = 308
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 92/284 (32%), Gaps = 20/284 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL---------GAHQFVPT 61
+ F ++ +A+ ++ ++ P + + F +
Sbjct: 3 FLKQIFSEFSKDRCSTLAAALAYYTAFALPPLLYLMMTVLTFSLSVMYDSEQATEKAQGI 62
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA--AYFSSNGVEALRISLNRA 119
+ A + I++ + + A ++ V AL+ +LN+
Sbjct: 63 LQTQASQMIGNPAAVEQIETIMENHEQTSGKWWKTLLSFAGILVGATGVVSALQAALNQV 122
Query: 120 YRVVEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ V R +SFG +L L++ V + V + +
Sbjct: 123 WEVKPDPENSGIKDMIAKRFLSFGMILGLGFLLLVSLVVSSVLTALGDQVGGWIGMSETV 182
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
+ L +F+ + F+P A +K + G T I ++VG Y
Sbjct: 183 AHLANFA---VQALVVFVIFASIFKFMPDAITKWRDVAVGAAVTTILFLVGRYAMQLYFS 239
Query: 234 TFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ + A AS+ LV++Y + +LGAE + Y
Sbjct: 240 MSEPGAQLGAAAASLAVLLVWVYYTAMIVLLGAEATQVYAVRYG 283
>gi|116626071|ref|YP_828227.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
gi|116229233|gb|ABJ87942.1| ribonuclease BN [Candidatus Solibacter usitatus Ellin6076]
Length = 275
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/264 (18%), Positives = 93/264 (35%), Gaps = 9/264 (3%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
++I + +E + A IS S LLS FPF +L L + +
Sbjct: 11 HLELIRPTARYIMETEAHVYALAISASVLLSFFPFCNVMLSLCRMLHWPAAEEAIYLALR 70
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P +A + + L S + + ++ E L ++LNRA+ + RS
Sbjct: 71 DYFPGELAGFLKRNLAL-----QGHLQLTSMVLLLFTANGIFEPLEVALNRAWGITRNRS 125
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ +LI+ G + + ++ L P L L+I+ A +
Sbjct: 126 YLKNQLIALGMIFICGALAMLSLMFTAFNRQWLGAWSALAPVQSFLNLLIF---KIAAVP 182
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL-FTHYIVTFSTYSTMYAGLA 246
+ L V+ LP K + P I+ + + + Y+
Sbjct: 183 ISILALFLVYWLLPNRKISPSRVAPAAIYVGLVLEGLKYVNLAIAPYLQAKLEHEYSIFR 242
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+ L++ ++ + + GAE A
Sbjct: 243 HSVAILLWSFIAAMVVLAGAEWTA 266
>gi|167947537|ref|ZP_02534611.1| putative ribonuclease BN [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 168
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 22/139 (15%), Positives = 51/139 (36%)
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
+ A ++L + V + F ++ + +L + ++
Sbjct: 5 WSTGAILSLGPILIVVSVGVTSYLVSLPIFIEDATVVQLRTRLLGVMPVLISALAFTLLY 64
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+P + G + + + F Y+ F TY +Y +A+I L+++++
Sbjct: 65 ALVPNRNVPLRHAFAGGVLAALLFETAKRGFALYVTQFPTYEAIYGAMAAIPIFLIWIWL 124
Query: 258 LGVFFILGAELNASMIIYY 276
+ +LGAE + IY
Sbjct: 125 SWLVTLLGAEFTYCLGIYR 143
>gi|294634152|ref|ZP_06712705.1| ribonuclease BN [Streptomyces sp. e14]
gi|292829836|gb|EFF88192.1| ribonuclease BN [Streptomyces sp. e14]
Length = 355
Score = 75.5 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/268 (16%), Positives = 97/268 (36%), Gaps = 10/268 (3%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
I F ++ +A+ ++ L++FP ++F + + G + +V++ +P
Sbjct: 23 VIYKFYDDQAAYLAALLTYYGFLALFPLLLFLVAVLSAVLSGNPRLQQSVLNSALSEFP- 81
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
VI I I T+ L +AY + N +A + +LN+ + V R
Sbjct: 82 VIGDQIGHNIHSFHGN--TVAVTVGVLGSAYGALNVAQAAQHALNKIFAV--PRHARPDP 137
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
S L L V + A + F A + ++L
Sbjct: 138 FRSRLKGLKFLTLLAAGLLVTTGLSTAAEWASGVFGARLQTG--VRIAAELLSVLLNAAL 195
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY-STMYAGLASIMTC 251
L+ + L K + + + +W + T+Y+ + Y ++
Sbjct: 196 LVGSYRVLTRRKLPLRIMYGPALGAACAWQGLLWVGTYYVDHVLQGATATYGLFGIVLGL 255
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++Y+ + ++ AE++A + W +
Sbjct: 256 LAWIYLGALVYVFTAEVSAVRCMRLWPR 283
>gi|42525669|ref|NP_970767.1| ribonuclease BN-like family protein [Treponema denticola ATCC
35405]
gi|41815680|gb|AAS10648.1| ribonuclease BN-like family protein [Treponema denticola ATCC
35405]
Length = 435
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 83/255 (32%), Gaps = 1/255 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ IY I FV D A+ + + L+S P + + +
Sbjct: 23 KKGLYDFNQKIYITIVSFVNNDLLTTAAAGAYNFLMSALPIFILTLTILLRVLKQSPQQI 82
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + I + + + ++ S+ + YR
Sbjct: 83 KEALRALSIFQNTVNLDRFFHFLLNVNSFSFFEFIVLIFVLWMARRFFATIQHSIRKVYR 142
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ T LI ++ + LV + + NL ++ N
Sbjct: 143 KKIKITPLKTSLIVILGEIIVVILLVFLFIFLITGSAVFRSDFAQPVFSPNLFSLLRNLF 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ + + + ++ ++P K + L +S+ + F+ + T ++ +
Sbjct: 203 RFIPVIFMQLFVCLIYYWMPPIKPSFKTALLSSAACTLSYYFVKIFFSFFRSTV-KFTFV 261
Query: 242 YAGLASIMTCLVFLY 256
Y +++ L+ ++
Sbjct: 262 YGLFTNVILVLIQVW 276
>gi|86152513|ref|ZP_01070718.1| ribonuclease BN [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85843398|gb|EAQ60608.1| ribonuclease BN [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 268
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 99/268 (36%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V A+ + + + + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFSGYDFVINRIT 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ E + + + + + L + L + ++ I L + F
Sbjct: 113 K-NEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNFFE--------- 162
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ GL F+ K + S+ W +G LF +Y+V TY++
Sbjct: 163 ---ILPFVIIWGLFFISYSSSVHKGTLKSLSLVSFGAGTIWYIGKNLFVYYVVYNKTYAS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ + ++ G +L
Sbjct: 220 VYGSFSTILFFFIWIYISWIIYLFGLKL 247
>gi|218256947|ref|ZP_03474421.1| hypothetical protein PRABACTJOHN_00073 [Parabacteroides johnsonii
DSM 18315]
gi|218225868|gb|EEC98518.1| hypothetical protein PRABACTJOHN_00073 [Parabacteroides johnsonii
DSM 18315]
Length = 314
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 69/171 (40%), Gaps = 3/171 (1%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL 160
Y N + ++ + N +++ + R WY L+ V + S + + +
Sbjct: 1 MFYTVINLISSIEDTFNDIWQIQKSRPWYRKISDYLALFLILPVLMTASSGLSIFLSTLQ 60
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ L+ +I N + + +++ LP K + ++ L I + I+
Sbjct: 61 NSFFSQYFFFTPLVELILNIT---PYIITILAFTGLYISLPNTKVRFVNGLVAGILSGIA 117
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ ++ + S Y+ +Y A++ L++L + + + GAE++ +
Sbjct: 118 FQFFQFIYISGQIWVSKYNAIYGSFAALPLLLLWLQLSWLICLFGAEISYA 168
>gi|284926436|gb|ADC28788.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 99/268 (36%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFNILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V A+ + + + + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFSGYDFVINRIT 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ E + + + + + L + L + ++ I L + F
Sbjct: 113 K-NEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNFFE--------- 162
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ GL F+ K + S+ W +G LF +Y+V TY++
Sbjct: 163 ---ILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGAIWYIGKNLFVYYVVYNKTYAS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ + ++ G +L
Sbjct: 220 VYGSFSTILFFFIWIYISWIIYLFGLKL 247
>gi|260577482|ref|ZP_05845425.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
gi|258604381|gb|EEW17615.1| membrane protein [Corynebacterium jeikeium ATCC 43734]
Length = 381
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/260 (14%), Positives = 75/260 (28%), Gaps = 19/260 (7%)
Query: 9 FDII-YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH---QFVPTVID 64
+ +I + +S LL+ P ++ + Q +
Sbjct: 49 WKVIAKRLYFEVFFNALLDKGATLSFFTLLTGLPTLLAFYAIITLFLDQNRNQVTELTDE 108
Query: 65 VVFGAWPEVIAKPITDEILQVLAV--PAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ P + V+ + + IS L A + SS + A N Y
Sbjct: 109 FIDKNIPTNFQDNAQSIVSTVIGSTEQSIVMLVISVLLALFSSSAYLRAFSRMSNEMYGR 168
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFF-----------PALG 171
E R + L+ + LV ++ + + L
Sbjct: 169 REGRGLIRRWTTMWAVTLVLVIGLVFIAGAYFLREDIARPLLDKVAEPLRIQGFTTFVLE 228
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTH 230
+ L + R I + ++ P + ++ + G F IS + +L
Sbjct: 229 HFLPVWQYLRWPVIFFVSAILIAILYHVAPNVRFGRVRWLTVGSTFALISITIVGLLLRA 288
Query: 231 YIVTFSTYSTMYAGLASIMT 250
Y+ F Y +Y L I+
Sbjct: 289 YLNNFG-YIGIYGALGGIIV 307
>gi|229821436|ref|YP_002882962.1| ribonuclease BN [Beutenbergia cavernae DSM 12333]
gi|229567349|gb|ACQ81200.1| ribonuclease BN [Beutenbergia cavernae DSM 12333]
Length = 389
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 97/265 (36%), Gaps = 10/265 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQ-FVPTVIDVVFGAWP 71
+ + G +A I+ + L S+F + G + G LG V+D + A P
Sbjct: 37 RTLARYGAAKGGLLAGGIAYAGLFSIFSALTIGFTVFVGLLGDDDELFQAVLDALDRALP 96
Query: 72 E-----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + + V ++ + + + AL S+ + +
Sbjct: 97 GIVDTGDSSGGLLEPEQLVSNPGVGVAGVVAGVVLLLSALAVMGALGTSIRAMFGLATAP 156
Query: 127 SWYIT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL-LLIIWNGRIYA 184
I R+ ++ ++++V+ + + +A +A ++V ++ +++
Sbjct: 157 GNAILARVRDLVGFVVLALSVVVTAALGIAAGVAGSWVVDTLGLDSSVGAVLVRALGYLL 216
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + L A+ +L G ++ V L +V +T + + A
Sbjct: 217 AFVVDASIFVMLIRVLAGARPPRRDLLVGASIGALASGVIRFL-GTALVGGATANPLLAS 275
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
A+++T L+++ ++ + A
Sbjct: 276 FAALVTLLLWVNLVARVTLYVAAWT 300
>gi|57238083|ref|YP_179333.1| ribonuclease BN [Campylobacter jejuni RM1221]
gi|86150320|ref|ZP_01068546.1| YihY family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596516|ref|ZP_01099753.1| YihY family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|121613677|ref|YP_001000886.1| YihY family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|148926212|ref|ZP_01809897.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni
CG8486]
gi|167005798|ref|ZP_02271556.1| YihY family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|218562824|ref|YP_002344603.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|57166887|gb|AAW35666.1| ribonuclease BN [Campylobacter jejuni RM1221]
gi|85839145|gb|EAQ56408.1| YihY family protein [Campylobacter jejuni subsp. jejuni CF93-6]
gi|87249082|gb|EAQ72043.1| YihY family protein [Campylobacter jejuni subsp. jejuni 81-176]
gi|88191357|gb|EAQ95329.1| YihY family protein [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360530|emb|CAL35327.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|145845383|gb|EDK22476.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni
CG8486]
gi|315058645|gb|ADT72974.1| Ribonuclease BN [Campylobacter jejuni subsp. jejuni S3]
gi|315927270|gb|EFV06615.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929800|gb|EFV08966.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
305]
Length = 268
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 99/268 (36%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V A+ + + + + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFSGYDFVINRIT 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ E + + + + + L + L + ++ I L + F
Sbjct: 113 K-NEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNFFE--------- 162
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ GL F+ K + S+ W +G LF +Y+V TY++
Sbjct: 163 ---ILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGTIWYIGKNLFVYYVVYNKTYAS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ + ++ G +L
Sbjct: 220 VYGSFSTILFFFIWIYISWIIYLFGLKL 247
>gi|225849412|ref|YP_002729576.1| hypothetical protein SULAZ_1613 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225643574|gb|ACN98624.1| putative membrane protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 299
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/294 (15%), Positives = 111/294 (37%), Gaps = 14/294 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ F F + AI+ + ++ +S ++ LS+FP +F ++ F+ A +
Sbjct: 5 LNGIFIPFFISLILAIKDYFNKNYSYHSSSLAFYFFLSIFPMFIFVFSILSFI-AFLKIS 63
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +V+ +P + K + + + + L IS L + YF + A++++ + +
Sbjct: 64 DIYYIVYNLFPNIAEKFLENVLKFYNTNLSTNLSLISILLSLYFGKDLFIAIQMAFHYVW 123
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV-------------AIPLALAYVRKFF 167
+ + +A + V F+ + + L ++
Sbjct: 124 ELEYTTDRKKMIVSILALPFIAIIFTVFYLFMILLKFIDEVKNYLENFDVIFLKWLTNLI 183
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
L + I N + ++ F+ + + F + ++ V+F + VL
Sbjct: 184 NFLAENVDTILNLLNISEIITFFVVIHLLFYFFTPVNVERKKLILVVLFVSFCLFMMRVL 243
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
F I+ F + + ++ + SI LV++ + ++G + + K P
Sbjct: 244 FESVIINFLSKNPLFLTVGSIFAFLVWVKLSFDIILIGQRIVYYYSKHSEGKSP 297
>gi|283954770|ref|ZP_06372286.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 414]
gi|283793610|gb|EFC32363.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 414]
Length = 268
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 99/268 (36%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+++F I+ + +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKKFFTIL--------SNLRDKEILNYAAALSFYTILSLIPILFICFSIFTQISSFKAYY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V A+ + I + + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDIVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFSGYDFVINRIT 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + + + + + + L + L + ++ I L + F
Sbjct: 113 K-NDPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNFFE--------- 162
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ GL F+ K + S+ W +G LF +Y+V TY++
Sbjct: 163 ---ILPFVIIWGLFFISYSSSIHKGTLKSLTLVSFGAGAIWYIGKNLFVYYVVYNKTYAS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ + ++ G +L
Sbjct: 220 VYGSFSTILFFFIWIYISWIIYLFGLKL 247
>gi|283956606|ref|ZP_06374085.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 1336]
gi|283791855|gb|EFC30645.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 1336]
Length = 268
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 99/268 (36%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V A+ + + + + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFSGYDFVINRIV 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ E + + + + + L + L + ++ I L + F
Sbjct: 113 K-NEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNFFE--------- 162
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ GL F+ K + S+ W +G LF +Y+V TY++
Sbjct: 163 ---ILPFVIIWGLFFISYSSSVHKGTLRSLALVSFGAGAIWYIGKNLFVYYVVYNKTYAS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ + ++ G +L
Sbjct: 220 VYGSFSTILFFFIWIYISWIIYLFGLKL 247
>gi|152967910|ref|YP_001363694.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151362427|gb|ABS05430.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 357
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/267 (12%), Positives = 80/267 (29%), Gaps = 16/267 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
+ + E G +A I+ A S+FP + G + G + + V+D +
Sbjct: 21 RVWQRYGEARGNVLAGGIAYFAFFSIFPALAVGLTVLGLVMRNTPEVRDVVVDNLIAGVN 80
Query: 72 EVIAKPITDEI-----------LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + +S + ++ +R S+ +
Sbjct: 81 QYAPDLVHRGVKPANGTGIYIDEFIQGTALTWSLVVSTATFLFTGLGWMDGMRESIRAVF 140
Query: 121 RVVEMR-SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LII 177
+ + RL +L+ + + V A Y+ + ++
Sbjct: 141 GDPPGGGNLVVVRLRDLLGMLVVGSGVALSVASVVVTNGAGGYLLSALGFEPSTWSRWLL 200
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ V LP A + +L G + I + T + +
Sbjct: 201 GAAGFLVAFAIDTCTFLLVFRVLPNADVPLHDLLQGAVLGGIGLGLLKQFGTAFARRSAE 260
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ A+++ LV + ++ +L
Sbjct: 261 GNAFLGAAATLVVLLVLMNLISRLILL 287
>gi|325475223|gb|EGC78408.1| ribonuclease BN-like family protein [Treponema denticola F0402]
Length = 435
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 81/255 (31%), Gaps = 1/255 (0%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ IY I FV D A+ + + L+S P + + +
Sbjct: 23 KKGLYDFNQKIYITIVSFVNNDLLTTAAAGAYNFLMSALPIFILTLTILLRVLKQSPQQI 82
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + + I + + + ++ S+ + YR
Sbjct: 83 KEALRALSIFQNTVNLDRFFHFLLNVNSFSFFEFIVLIFVLWMARRFFATIQHSIRKVYR 142
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ T LI ++ + LV + + NL ++ N
Sbjct: 143 KKIKITPLKTSLIVILGEIIVVILLVFLFIFLITGSAVFRSDFAQPVFSPNLFSLLRNLF 202
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
+ ++ + + + ++ +P K + L IS+ + F + T ++ +
Sbjct: 203 RFIPVIFMQLFVCLIYYLMPPIKPSFKTALLSSAACTISYYFVKIFFIFFRSTV-KFTFV 261
Query: 242 YAGLASIMTCLVFLY 256
Y +++ L+ ++
Sbjct: 262 YGLFTNVILVLIQVW 276
>gi|86151142|ref|ZP_01069358.1| YihY family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|157415475|ref|YP_001482731.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 81116]
gi|85842312|gb|EAQ59558.1| YihY family protein [Campylobacter jejuni subsp. jejuni 260.94]
gi|157386439|gb|ABV52754.1| putative ribonuclease BN [Campylobacter jejuni subsp. jejuni 81116]
gi|307748117|gb|ADN91387.1| ribonuclease BN [Campylobacter jejuni subsp. jejuni M1]
gi|315932356|gb|EFV11299.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
327]
Length = 268
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 99/268 (36%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M+ +F I+ ++ +++ A+ +S +LS+ P + ++ + + +
Sbjct: 1 MKNFFTILLNL--------RDKEILNYAAALSFYTVLSLIPILFVCFSVFTQISSFKAYY 52
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
V A+ + + + + L + +A A+ S +NR
Sbjct: 53 EKAKQVIFAFLIPTQQDVVATYIDTFLKNSVNLGIVGLIAMAFTSLAFFSGYDFVINRIT 112
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ E + + + + + L + L + ++ I L + F
Sbjct: 113 K-NEPKGLWQSISSYWTLLTLVPLGLGLSFYISGFIQQTLDDYKIGFNFFE--------- 162
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ GL F+ K + S+ W +G LF +Y+V TY++
Sbjct: 163 ---ILPFVIIWGLFFISYSSSVHKGTLKSLALVSFGAGAIWYIGKNLFVYYVVYNKTYAS 219
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y ++I+ +++Y+ + ++ G +L
Sbjct: 220 VYGSFSTILFFFIWIYISWIIYLFGLKL 247
>gi|329945933|ref|ZP_08293620.1| ribonuclease BN-like family protein [Actinomyces sp. oral taxon 170
str. F0386]
gi|328528381|gb|EGF55359.1| ribonuclease BN-like family protein [Actinomyces sp. oral taxon 170
str. F0386]
Length = 340
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/264 (14%), Positives = 92/264 (34%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
+ + G MA I+ + + SVF +V G ++ + V+D + P
Sbjct: 19 RTLIRYGTARGALMAGGIAYTGMFSVFAVLVIGVSMLMAMLGNRPTLRAAVVDSINSLLP 78
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALA----AAYFSSNGVEALRISLNRAYR-VVEMR 126
VI ++ V + + ++ Y + + L+I+L + V +
Sbjct: 79 GVIDTGNGQGLVSVEQLTLTSALNLGSVVAVGALIYSVISLMGTLKIALRAMFGLVNPVM 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
I +L + L+ +++ + V V + +L
Sbjct: 139 RPMIGQLANIAGFLVIVAGVLVTAVASVVTTTLSGNVGRALGLPDSLTGTGAWLTTLLIS 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G++ + + + + + G + + V + T + + + + + A A
Sbjct: 199 FLIDTGVLALLITICGVRPPRRDLTLGCMLGAFALGVLRQVGTGAVSSV-SRNPLLASFA 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+I +++L++ +L A A
Sbjct: 258 AIAVLVLWLHLTSRTVLLVAAWMA 281
>gi|116609794|gb|ABK02518.1| ribonuclease BN [Arthrobacter sp. FB24]
Length = 329
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 98/267 (36%), Gaps = 9/267 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
A +H+ + G MA+ I S+ + G +LAG + G + VI + A
Sbjct: 39 MRAFQHYNLQHGPLMAAGIGFRMFFSITGLLATGLSLAGLVLSGQPALLDQVIKSIAKAA 98
Query: 71 PE----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + D + I+A + + + +R + ++
Sbjct: 99 PGLMKVDGGEGLVDPYQLLNPSGLGWAAVIAAAVTVFTALGWISGIRDGVRGMMQLGPRG 158
Query: 127 SWYI-TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYA 184
+ L G +LL V LV+ + + A +V + + + ++
Sbjct: 159 MNPVLQILRDAGILLLLGVALVLSAAASLIFGTAAGWVTEQLQLDPVMAWPLTTAIKVGV 218
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ ++ + + K ++L G I + + V +F+ ++ + + + A
Sbjct: 219 PLALGWVTALIMFRLAAGLKLSRQALLEGTILSAVGTTVLQ-IFSTELLASAGRNPILAP 277
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ L++ ++ +++ A +A
Sbjct: 278 FAIIIGLLIWFNLVSQVYLVSAAWSAV 304
>gi|297204753|ref|ZP_06922150.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|297148773|gb|EDY56485.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 386
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 81/276 (29%), Gaps = 21/276 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R F +I + H + + + A+ ++ L+ P + A++A QFV
Sbjct: 97 LRNRAENRFPVITHLLSHLISVNVFDSATRLAAQTFLTAVPLLFVVASIAPQWLRDQFVT 156
Query: 61 TVIDVV-FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
++ + + + + L ++ A++ RA
Sbjct: 157 SLHEAFGLTGSANAELNKVLKGTDDPSDELRQTTGVVGGLMVLLSATACSRAMQRLCQRA 216
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ + ++ + L + + + ++ + + + W
Sbjct: 217 WSL--PKASARVAAWRWIAWLATWLAMFAVQGSLRTGFGLGLWLGVPLLLIAEVGIWWWT 274
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + +LPG + + V + Y+ +S
Sbjct: 275 QHLLLVA-----------------RVPWRPLLPGALLAGTALAVLTSTASLYVPRALNHS 317
Query: 240 TM-YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
Y L ++ T L +L L V L A +
Sbjct: 318 LAKYGSLGAVFTLLSWLITLCVVTTLCLTAGAVIAR 353
>gi|224543596|ref|ZP_03684135.1| hypothetical protein CATMIT_02805 [Catenibacterium mitsuokai DSM
15897]
gi|224523468|gb|EEF92573.1| hypothetical protein CATMIT_02805 [Catenibacterium mitsuokai DSM
15897]
Length = 355
Score = 73.5 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/275 (13%), Positives = 86/275 (31%), Gaps = 14/275 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+++ + + ++ +S ++ + P A + L V +
Sbjct: 2 KDIYNKAMAIYDDYRYYVPSFSSAALSFYLIILLIPATTIIAVVTSSLHIS--VEFLEMC 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ A+ I D + + + + + Y S G+ + + + V E
Sbjct: 60 IKEFIKPAYAEMILDTLK---GNSLNTVSILVFIWSFYAVSRGIGNIYDISKKMFAVEER 116
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
I I V + + +++S V +A + L I R
Sbjct: 117 SESVIAWYIYVFKVTMLLLGTLLISIVLLATGPISRVF--------HFLYGIAFMRFVLL 168
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + + +++ +P + L G T V+ + +Y + +++Y L
Sbjct: 169 FLIMVLFFMAIYMIVPRERITYHEALQGAFVTSGGIVILYIALNYYFKY-ADLTSLYGPL 227
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
SI L F +G L + K
Sbjct: 228 TSICVILFVFDWASEIFYVGMYLTHIAYLRRNNAK 262
>gi|222478698|ref|YP_002564935.1| ribonuclease BN [Halorubrum lacusprofundi ATCC 49239]
gi|222451600|gb|ACM55865.1| ribonuclease BN [Halorubrum lacusprofundi ATCC 49239]
Length = 270
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/238 (14%), Positives = 82/238 (34%), Gaps = 20/238 (8%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
+S P ++ + Q V + + +++ + V A
Sbjct: 35 FVSQVPLLILVLAVVS----DQLVGQIQTTTPDFLTPGAQQLLSEAL--VTASGRTWAAL 88
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
++ + +N V + +NR R + T+L G ++ + +++ +
Sbjct: 89 LAVGVLVWSGANIVIGFQTVVNRVENT--PRESFRTQLHDAGSIIGSFGLVILAVILTNV 146
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
I L + ++ + + L I + ++ S + LPG +
Sbjct: 147 IFALL-----------PVGRVLSYSKPFVQFGTLTIAFLPLYYAPSRLVSSLTEALPGAL 195
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMI 273
+ W V + Y + Y +Y L+ I+ L Y+ + ++GA +NA +
Sbjct: 196 TAAVGWTVLLTAVSFYAANATQY-ALYGVLSGIIIILTSFYLGAIILMIGAIVNAVIA 252
>gi|227494749|ref|ZP_03925065.1| membrane protein ribonuclease BN family protein [Actinomyces
coleocanis DSM 15436]
gi|226831749|gb|EEH64132.1| membrane protein ribonuclease BN family protein [Actinomyces
coleocanis DSM 15436]
Length = 433
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 97/279 (34%), Gaps = 12/279 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
+ Y + A+ + + G +A IS A+ S+ + G + + H
Sbjct: 59 KLYEWYSHSRVGRALARYGLKRGHLLAGGISYVAMFSITAAVAIGWTIFMAVLGHNEPLR 118
Query: 62 VIDVV--------FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
V + P+ + + +L P I+ ++ +S + AL+
Sbjct: 119 VSTLTAIDKAMPGLLITPDDPNNGLLNPDSLILKSPFTIAGFIATVSLFLSASRVMAALK 178
Query: 114 ISLNRAYR-VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
SL + V + ++ + L ++ +++ + + V V + G
Sbjct: 179 TSLWSMFGIVHLPDKPVVAQVRDYAGFFLLTLGVLVTAALGVLTSTLSTLVIEALGISGA 238
Query: 173 LLL-IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
++ + L + + F+ + ++ G + ++ L T
Sbjct: 239 FSTFLLQASSLLIAFLVDAVVFAILVRFIAGVRVPKWDLIWGSLMLGVASGAVRYLGTSA 298
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+ + + + A A+++T ++++ ++ ++ A A
Sbjct: 299 VGSVN--DPVLAAGAAVITLMLWINLIARLVLMIAAWMA 335
>gi|89901196|ref|YP_523667.1| ribonuclease BN [Rhodoferax ferrireducens T118]
gi|89345933|gb|ABD70136.1| ribonuclease BN, putative [Rhodoferax ferrireducens T118]
Length = 301
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 4/244 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ F G +A ++ ALLS+ P ++ + +
Sbjct: 18 FAIRTLKGFRANQGLLLAGAVAYYALLSIVPMLILTVIALSHFVDQAALLQTLGRYLEWL 77
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---EMRS 127
+ I E+ L L + ++ +FSS L +++ + R
Sbjct: 78 VPGQSGVIIAELANFLL-HRDVLSWVLLVSMLFFSSLAFTVLENAMSVIFHHRVAIRRRH 136
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ I+ +I + Y+L + L++++ V ++ +F +L + +
Sbjct: 137 FLISAVIPYAYILSLGLGLLLVTLVAGSLQAIGQERVEFLWRSWSLGGVSGALLYLLGLA 196
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L V+L +P + + L G + + W + Y T S T+Y L +
Sbjct: 197 GEIFVLTSVYLVMPVGRPSLFHALLGAVAAALMWELSRHALVWYFTTLSQIGTVYGSLTT 256
Query: 248 IMTC 251
+
Sbjct: 257 AIAV 260
>gi|268680213|ref|YP_003304644.1| ribonuclease BN [Sulfurospirillum deleyianum DSM 6946]
gi|268618244|gb|ACZ12609.1| ribonuclease BN [Sulfurospirillum deleyianum DSM 6946]
Length = 273
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 89/267 (33%), Gaps = 10/267 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ + + + AS +S +LS+ P ++ +L L + + +
Sbjct: 9 EFFKKLRDVELAHYASSLSFHTILSLIPILLITFSLFTKLPLFEIYYEKLQSFIFSSLIP 68
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
+ I L + + + Y S +++ + + RS++
Sbjct: 69 TQQDIMIHYLHDFIANTGNMGVVGLIFVLYISIMFFLDYEKIVSKIFET-KTRSFWEALA 127
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ V L + L+I + I L + N + +++
Sbjct: 128 TYWTMVTLMPLGLIIFFYSSATIQTFLE---------QTPVTSTINFVQFTPYFIIWLLF 178
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
+ ++ K + S L + W + LF Y+ TY ++Y + ++ +
Sbjct: 179 LIMYSVSAKIKIHLKSALLSSFIASLFWYISKNLFVFYVAYNKTYLSIYGSFSILLFFFL 238
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y+ ++ G +L + K+
Sbjct: 239 WIYLSWFIYLYGLKLCFLLNEKERAKR 265
>gi|24215362|ref|NP_712843.1| ribonuclease BN [Leptospira interrogans serovar Lai str. 56601]
gi|45657209|ref|YP_001295.1| ribonuclease BN transmembrane protein [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
gi|24196473|gb|AAN49861.1| ribonuclease BN [Leptospira interrogans serovar Lai str. 56601]
gi|45600447|gb|AAS69932.1| ribonuclease BN transmembrane protein [Leptospira interrogans
serovar Copenhageni str. Fiocruz L1-130]
Length = 749
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 60/151 (39%), Gaps = 6/151 (3%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA-----HQ 57
F I II + F+++D AS IS + ++S+ P + +L +
Sbjct: 23 RTFVIFIRIILGSAYRFIKDDCLMQASGISYTTIVSLIPMLTVALSLITITSGLENRKEE 82
Query: 58 FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLN 117
T+ + + + P + I ++ ++ + I + + ++ + +L + N
Sbjct: 83 IFDTINTFILQSNISIDINPYLETIGDLIDTASQ-IGAIGFITLVFSATAVLRSLENAFN 141
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+++ RS + + F + + + VI
Sbjct: 142 GIWKIHSNRSLFQKLIFYFFVLAIGPLLFVI 172
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ ++ I RI + +++ + ++ +P K + + G T +
Sbjct: 494 KFATTLITGGDSVFTIYSFLRILFPLSGIWLFFLSLYSLIPNTKVPLKASSVGAAVTGVI 553
Query: 221 WVVGAVLFTHYIVTFS-TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++V F YI++F+ T +Y LA+I L+ +Y L + + GAE+ A +
Sbjct: 554 FLVFLWGFQVYILSFTETTMIIYKALAAIPIFLLGVYSLSLIVLFGAEITACLQFRER 611
>gi|183220924|ref|YP_001838920.1| putative ribonuclease BN [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911020|ref|YP_001962575.1| ribonuclease BN [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167775696|gb|ABZ93997.1| Ribonuclease BN [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167779346|gb|ABZ97644.1| Putative ribonuclease BN; putative membrane protein [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 794
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 16/152 (10%), Positives = 57/152 (37%), Gaps = 4/152 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVP 60
+ I ++ ++ F+++D + S ++ + ++++ P + L G H
Sbjct: 23 KRRLIIGIRVLLVSVHRFMKDDCLIIGSSLAYTTIVTLIPTLTVALALITVASGIHTRQA 82
Query: 61 TVIDVVFGAWPEVIAKP-ITDEILQVLA--VPAKGLFTISALAAAYFSSNGVEALRISLN 117
++D + + IT + + A + + + + ++ + +L + +
Sbjct: 83 EMVDEINSYLLRNNIQFDITPYLETLSDIISTATQIGAVGFVVFIFSATAVLRSLEKAFH 142
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
+ + R++ + F + + V+
Sbjct: 143 IIWNIDLHRNFINKFVFYFFLISFGPLLFVVG 174
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 58/148 (39%), Gaps = 5/148 (3%)
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L + V + + K + + +I +L+L++ + +
Sbjct: 517 MLGIIGVGEFNKIIRVEDNGSGQTIWKKYQGGKRFFSLYSIFQILLPLLSLWLFFLLIFN 576
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFT-HYIVTFS-TYSTMYAGLASIMTCLVFLY 256
+P K I + G T + ++ F Y+ +F+ +Y LA+I L+ +Y
Sbjct: 577 IIPNTKVPIKASSIGAAVTGLILILFFWGFINIYLTSFTEKTMLVYKALAAIPIALLAIY 636
Query: 257 MLGVFFILGAELNASMI---IYYWRKKP 281
+ + + GAE+ A++ Y K P
Sbjct: 637 SIALIILYGAEVTATLQFPDRYLLPKHP 664
>gi|116617613|ref|YP_817984.1| ribonuclease BN-like family protein [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
gi|116096460|gb|ABJ61611.1| Ribonuclease BN-like family enzyme [Leuconostoc mesenteroides
subsp. mesenteroides ATCC 8293]
Length = 286
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 48/263 (18%), Positives = 100/263 (38%), Gaps = 7/263 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + ALL+VFP ++ A + F ++ ++ P+ I +
Sbjct: 25 FTRSQIGYVGPTFAYYALLTVFPILMGAALIVSFTSISTA--DLLAMMRNVLPKNIENIV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ VL+ + L + S L + S + R S N V E + TR SF +
Sbjct: 83 IPIMESVLSSRSTSLLSFSVLFTIWSISRVIAVFRQSFNAIADVKEHINSLFTRAFSFIW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM-LALFIGLIFVH 197
+L ++ + + + L V + P + R + + + L + ++
Sbjct: 143 LL----FILTLFALLMVGSNVLTIVIQHLPYSEWTNFLQHQTRWFIWLGIWLALVMMNFF 198
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L A++ +L G + + FT Y Y ++S++ L++L +
Sbjct: 199 LPAKDARAPFRFVLVGSFLELVMLNLLNRGFTFYAQFALGKYDFYQSVSSMIAMLIWLNL 258
Query: 258 LGVFFILGAELNASMIIYYWRKK 280
+ +LG + + + WRK+
Sbjct: 259 IATILVLGYVVIKWLSVINWRKE 281
>gi|311896451|dbj|BAJ28859.1| putative ribonuclease [Kitasatospora setae KM-6054]
Length = 314
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 90/271 (33%), Gaps = 8/271 (2%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
Y F G +A ++ L++FP + +A + V + D V P
Sbjct: 23 YLVYLLFDAVQGNRLAGAVTFFGFLALFPLLTVALAIALATLSDSRVHQLQDKVTEQLPG 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
L + A + +S L V+ +R ++ +R+ +
Sbjct: 83 ----LADSLDLNAMVANAGTVGLVSGLLLLVSGLGWVDTMRGAVRTVWRLPAEGGNVLLV 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ VLL + + S A+ LA+ L + +
Sbjct: 139 KLRDCLVLLGLGLVCLASLAGSALATTLAHRLADGLGLDGGAARWLLSGLGFLIAVGADL 198
Query: 193 LIFVHLFLPAAKS---KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L+F +L P + ++L G + + + + +L + Y+ + + S +Y +
Sbjct: 199 LLFAYLLGPFPQIAGQSRRALLEGALIGAVGFELLKLLLSSYLGSVAGRS-LYGAFGVPV 257
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+++ + + A A R++
Sbjct: 258 ALLLWIDFVARLLMYCAAWTALADPEEARRR 288
>gi|42524302|ref|NP_969682.1| ribonuclease BN [Bdellovibrio bacteriovorus HD100]
gi|39576511|emb|CAE80675.1| ribonuclease BN [Bdellovibrio bacteriovorus HD100]
Length = 248
Score = 72.8 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 86/260 (33%), Gaps = 16/260 (6%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFGAWPEVIAKP 77
+ + +A+ +S S L++ PFI +G F P V ++ E
Sbjct: 1 MRDGELQLVAASLSFSTALALVPFIAVVLATFQSIGGLEAFYPKVEALLLSNMKEAAGSG 60
Query: 78 ITDEILQVLAV-PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
T + VL A L T A+ S + + + ++R + R +Y + +
Sbjct: 61 FTKMMKVVLKNVNAGKLGTAGAVFLFITSIRLIHDMEVGIHRVWNQRNTRPFYKRLIYHW 120
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
G VL V L I + + L L L V
Sbjct: 121 GLVLAIPVFLAIYVGFTSLEQFQFVHRVIPATVSNS--------------LVLVGTLFLV 166
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
+ +P + + + + ++ + F Y+ +Y A++ L+++
Sbjct: 167 YKMVPDVRVRAKAAFISSLLASVTLFGVHKGYVLLAKKFFAYNKLYGSFAALPLLLLWIL 226
Query: 257 MLGVFFILGAELNASMIIYY 276
L + G L AS+ +
Sbjct: 227 TLWYVILGGVALCASLQKRH 246
>gi|256832055|ref|YP_003160782.1| ribonuclease BN [Jonesia denitrificans DSM 20603]
gi|256685586|gb|ACV08479.1| ribonuclease BN [Jonesia denitrificans DSM 20603]
Length = 315
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/253 (15%), Positives = 84/253 (33%), Gaps = 7/253 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG------AHQFVPTVIDVVF 67
A+ + +G +A I+ +AL S+ + G L + Q ++ V
Sbjct: 34 RAVRRYQLANGSILAGGITYTALFSLSAALTIGVTLLMRVFGNNEQLRDQIFESLDQSVP 93
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVEMR 126
G + ++ I+ + + + A R SL+ + V +
Sbjct: 94 GLINTGDNGGLVRPEDLTVSPTVTLTSAIAVGVLLFTALRVMAAFRKSLHAMFGMVTARK 153
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ I +L + +V + + + +A+ ++ +I G I +
Sbjct: 154 NKPIDKLRELIGFAVIAVGVFVSAVATIAVSAVGRWMSGQLVGGELWSALIPVGSILVGV 213
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L + + L K + G + VL T + +T + ++A
Sbjct: 214 LVDAGMFVLLMRVLAGLKMPRKDLFAGAAVAAAGLGLLRVLGTSVVAGSATSNPLFASAT 273
Query: 247 SIMTCLVFLYMLG 259
I+T LV++
Sbjct: 274 VIITILVWINTSA 286
>gi|307702045|ref|ZP_07639052.1| ribonuclease BN, putative [Streptococcus mitis NCTC 12261]
gi|307616532|gb|EFN95722.1| ribonuclease BN, putative [Streptococcus mitis NCTC 12261]
Length = 183
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFRIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + VV P+ + + I +VL P+ GL + + L+A + S + L+ + N+
Sbjct: 59 VSNFLKVVNEFLPDTMYDVVAKIITEVLTQPSTGLLSFAVLSALWTFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
AY V + R +L+S + + F+ V + L ++ ++ + + +
Sbjct: 119 AYGVAKNRGMISHQLMSLFVSFGLQILFALALFLSVFGRMLLNLIKSYWKSDSPIFDYLQ 178
Query: 179 NG 180
+
Sbjct: 179 DL 180
>gi|301166271|emb|CBW25846.1| putative tRNA-processing ribonuclease [Bacteriovorax marinus SJ]
Length = 330
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/256 (16%), Positives = 81/256 (31%), Gaps = 7/256 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH--QFVPTVIDVVFGAWPEVIAK 76
F + +A + ALLS P ++ +L GFL V+ + P +
Sbjct: 37 FKKRKCEILAGATTFFALLSFCPAMLLSISLVGFLTGDIASAKGIVLTSLNENIPSLAPW 96
Query: 77 PITDE--ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
+ I+ K + L Y + AL + + + L
Sbjct: 97 IMKSISAIVDQQLHTTKSSNVFNTLFLGYSLIGLISALMYGVRTIAGSRAKGGYLVEDLK 156
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
SF ++ ++L + + + V P L +L+ I
Sbjct: 157 SF--MIGVCMSLFLGFLFVSSNEVLFKAVFFSGPEKLPDLAKTVFNLQLLPILSSIIFFT 214
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST-YSTMYAGLASIMTCLV 253
+ F K + G +V+G Y+ + Y ++I+ +V
Sbjct: 215 GFYKFSSGKKIALSHAFLGACSFVALFVLGKSGHWIYVKLSEQELAQNYGNFSTIVMAVV 274
Query: 254 FLYMLGVFFILGAELN 269
++Y L F GA L+
Sbjct: 275 WVYYLVCSFFYGASLS 290
>gi|325068226|ref|ZP_08126899.1| ribonuclease BN [Actinomyces oris K20]
Length = 340
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 95/266 (35%), Gaps = 8/266 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA--HQFVPTVIDVVFGA 69
I A+ + G MA I+ + + SVF +V G ++ + V+D +
Sbjct: 17 IGRALIRYGTARGALMAGGIAYTGMFSVFAVLVIGVSILMAMLGRYPSIRAAVVDSINSL 76
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYR-VVE 124
P VI ++ V + + ++ A Y + + L+I+L + V
Sbjct: 77 LPGVIDTGNGKGLVSVEQLTLSSALNLGSVLAAGAFIYSVISLMGTLKIALRAMFGLVNP 136
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ + +L + L+ +++ + V V + +L
Sbjct: 137 VMRPVVGQLANLAGFLIIVAGVLVTAVASVVTTTLSGSVGRSLGLPQSLTGTGAWVMTLL 196
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ G++ + + + +L G + + V + T + + T + + A
Sbjct: 197 LSFLIDTGVLAFLITMCGIRPPRRDLLQGCMLGAFALGVLRQVGTGAVGSV-TRNPLLAS 255
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
A+I +++L++ +L A A
Sbjct: 256 FAAIAVLILWLHLTSRVVLLVAAWMA 281
>gi|310286718|ref|YP_003937976.1| Ribonuclease BN-like family [Bifidobacterium bifidum S17]
gi|309250654|gb|ADO52402.1| Ribonuclease BN-like family [Bifidobacterium bifidum S17]
Length = 319
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/273 (12%), Positives = 93/273 (34%), Gaps = 4/273 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+I I+ +V G +A+ ++ L + F + + G + G+ + ++
Sbjct: 39 WWRRSLIGRVIDRYVSRRGPLLANGLAYGLLFAFFAGVWIVVSALGLVVTGSEEMQKALL 98
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ P V + +L ++ ++ + + + +LR ++ +
Sbjct: 99 AMLRTVIPSVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTGWMNSLRNAVTTMFDDC 158
Query: 124 EMRSWYI--TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + +++A + ++ + V+ L +R A +L +
Sbjct: 159 TQELNVVKARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRALGIADDSLPGALLLES 218
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L +F+ L A + V L ++T ++ + M
Sbjct: 219 TGFATGVLLNFALFMLLLRVVAHIRAGKFTLVGAALGALAVAVMQLLGARLLTGASRNPM 278
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
A A+I+ L++ ++ ++ A A
Sbjct: 279 LAPFAAIIGVLIWFNLVAQVIMICAAFIAECRR 311
>gi|300711967|ref|YP_003737781.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
gi|299125650|gb|ADJ15989.1| ribonuclease BN [Halalkalicoccus jeotgali B3]
Length = 259
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/265 (12%), Positives = 91/265 (34%), Gaps = 14/265 (5%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
++++ + + ++ +A ++ A +S+ P ++ A L ++ +
Sbjct: 5 YEVLVEIVREVRRQNLPFLAGSLAFYAFVSLLPLLLLVLVAASLLAGETVARYLLALTRL 64
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ I + A G + L + + A+ + + Y ++
Sbjct: 65 YLSPTGQDLLAGAITE--ATGWVGSSIVGLLVLLWAAFRMFLAIDTAFAQLYETPRTKTS 122
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
R+ A V +++ + + L +
Sbjct: 123 LGQRVRDGLIASSAIVLVLVAAVATAGVFTLL-----------PDFSYSGAVDSLLLVCG 171
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L + + ++ P + ++ +LPG +F + W + LF Y + +T + ++ +
Sbjct: 172 LLVAFLPLYYVFPNVEVTLVEVLPGALFAAVGWALLQWLFQFY-ASVATLAAVFGVIGGA 230
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
+ L++LY + + G +N +
Sbjct: 231 LLFLLWLYFGALIILFGVVVNVVLA 255
>gi|256423035|ref|YP_003123688.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
gi|256037943|gb|ACU61487.1| ribonuclease BN [Chitinophaga pinensis DSM 2588]
Length = 302
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 101/282 (35%), Gaps = 6/282 (2%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVP 60
REYF + + + + D +A + A ++ P ++ + G
Sbjct: 3 REYFKSIIRTLRVSFQVLQNNDPLRLAGATAFFASFALPPILLILLQVFGLLFDRRSIGR 62
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLA-VPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
+I + + A+ + + + I + + ++ ++ +R SLN+
Sbjct: 63 QLIGRLGELVGKDSAQQVVITLRGFRGLAQTWPIAIILFVFLLFVATTLLKVIRSSLNQV 122
Query: 120 YRVV-EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
+ + +R ++ L+ L+ ++ V A A++ + L I+
Sbjct: 123 WMIRIAVRESFLDSLLGRLRSLIVIGAAGLLFLASVLGESAHAFLGNYVNELFPSAAFIF 182
Query: 179 NGRI--YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+G ++L + + +LP A+ G + T + + +G ++ +
Sbjct: 183 SGVFTQLVSLLIVTCWFAVLFRYLPDARPTWKVAFSGALLTGVLFSIGKLVLRRLL-YGG 241
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+Y AS + ++F++ + F GA + R
Sbjct: 242 NIGILYGASASAVLLMLFIFYSAIIFYYGAAFTKVWSEFKHR 283
>gi|284166081|ref|YP_003404360.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284015736|gb|ADB61687.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 285
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/272 (16%), Positives = 90/272 (33%), Gaps = 8/272 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F ++ D + E A+ ++ A ++ P ++ A + + ++ +
Sbjct: 7 FALVRDVVAVAHERQLSVTAAGLAYHAFNTLVPLVILALVGASLV---DGLEPLVSTLEA 63
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
A A ++ + + +A+ + Y S+
Sbjct: 64 AAGIEGAVTDGGLEGMTGGSARTRAALLAVAVLLWSAVRLFQAINSAFTDVYGARTDESY 123
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
T L V + + V V AL V ++ G
Sbjct: 124 VATTTTVTLVTALYVVLVTVTIAVGV----ALVTVVGVSLSVVVDGGWTAAGSTLLLAGL 179
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L ++ P + +LPG F +SW V AV F + T + ++ +I
Sbjct: 180 LLAVFFPMYYLFPQPNVSVGEVLPGTAFAAVSWTVLAVGFRFCVSTSESV-ALFGIAGAI 238
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ L ++Y+ G+ +LGA LNA + ++
Sbjct: 239 LLVLTWVYLGGLCLLLGAVLNAVRADHVDPEE 270
>gi|302538623|ref|ZP_07290965.1| predicted protein [Streptomyces sp. C]
gi|302447518|gb|EFL19334.1| predicted protein [Streptomyces sp. C]
Length = 363
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 78/267 (29%), Gaps = 22/267 (8%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F +I E + + + A+ ++ LL+V P + A+LA Q ++ +
Sbjct: 98 FPVITHLAERMIAVNIFDSATRVAAQVLLTVVPLLFVVASLAPRALQEQLTSSLRALF-- 155
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ + + + + ++ ++ A++ RA+ +
Sbjct: 156 GLTGESGEQLDEFFAGTDEDVQNAVGVVGSVMVLLSATAVSRAVQRLCKRAWGIP----- 210
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
V + V P+ + + T+L
Sbjct: 211 --RGAARIAVWRWVVWIAVWTGLLVVQGPV------------RDGFGTGLWLGVPLTLLL 256
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLAS 247
+ L +LPG + + ++ ++ Y+ + S
Sbjct: 257 QTAAWWWTQHLLLGGAVGWWPLLPGALLSAVAVTALSLGARLYMPLALNRVLGEFGAFGS 316
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
+ L +L +L V +G A +
Sbjct: 317 VFVLLSWLIVLCVAIAIGLSTGAVLAQ 343
>gi|170783170|ref|YP_001711504.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
gi|169157740|emb|CAQ02942.1| putative integral membrane protein [Clavibacter michiganensis
subsp. sepedonicus]
Length = 374
Score = 72.0 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 107/266 (40%), Gaps = 9/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGAWP 71
+ G +A+ +S A+ +VF + G ++AG + A + +++ ++ GA P
Sbjct: 47 RVFLAYGAAGGPILAAGMSYQAVFAVFAALAVGFSVAGSVLADNPMLLDSLLSIIQGAVP 106
Query: 72 E--VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I D + + I ++ + + + R S+ R + + +++
Sbjct: 107 GLFGPDGVIKDPQELLQSRAINLAGIIGSIGLLVTALGWLASTRDSVRRIFELPPPITFF 166
Query: 130 IT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ G L+ ++ +++ + + V L +V + + LL I GR L
Sbjct: 167 LLLKVKDLGLALVFALAMLLSAALSVVSTGLLGFVFRLMQVGEDSLLAIVVGRTVGLALV 226
Query: 189 LFIGLIFV---HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + + L + +L G + ++ V VL ++ ++ + + A
Sbjct: 227 LALDTAVLAGAYRILSGVRIPRTQLLQGALLGGVAMGVLKVL-GTALLGGASRNPLLASF 285
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ L++ ++ ++ A A
Sbjct: 286 AVIIGLLIWFNLICQVILICASWIAV 311
>gi|152965184|ref|YP_001360968.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151359701|gb|ABS02704.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 301
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 93/279 (33%), Gaps = 8/279 (2%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + D D + +++ ++ A +++ P +V L L + V + V
Sbjct: 9 WLRALFADVRTRLQGHDLFLVSAGVTFYAAIALVPSLVVVVRLLAALIGPERVLDLAGSV 68
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
A P E+++ L A + + AL A ++ E LR R
Sbjct: 69 GRALPTAQGA---GEVVRGLVATAVDVGWVPALVALVPATVYGEGLRRGFARVSVRHPEP 125
Query: 127 SWY--ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ R+ ++ L A L++ F+A+ ++ + F + + +
Sbjct: 126 APPAVRGRIGAWKVRLKALPLLLLAPAGFLAVLEVAPFLVRLFGSGVPGSALGVYIALNV 185
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
L + L++V+ L + + + G T F ++ + G
Sbjct: 186 DWLVVSPVLVYVYRVLGPVRPGWWAAIWGGYATGAFVSGFLQGFVLFLAIPVDLGAPFGG 245
Query: 245 ---LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ + ++L++ + G + + +
Sbjct: 246 YTQVGGAVAVCLWLWVFTALTVYGYAVTLELQRRRAVHR 284
>gi|148272147|ref|YP_001221708.1| putative ribonuclease [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830077|emb|CAN01006.1| conserved membrane protein, putative ribonuclease [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 369
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 109/266 (40%), Gaps = 9/266 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
+ + G +A+ +S A+ +VF + G ++AG + + ++I ++ GA P
Sbjct: 42 RVLLAYGAAGGPILAAGMSYQAVFAVFAALAVGFSVAGSVLADNPALLDSLITLIQGAVP 101
Query: 72 EVIAK--PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + I D + + + I ++ + + + R S+ R + + +++
Sbjct: 102 GLFGEGGAIKDPQALLASDAVRATGIIGSIGLLVTALGWLASTRDSVRRIFELPPPTTFF 161
Query: 130 IT-RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ ++ G L+ ++ +++ + + V L +V + LL I GR L
Sbjct: 162 LLLKVKDLGLALVFALAMLLSAALSVVSTGLLGFVFGLMQVGEDSLLAIVVGRTVGLALV 221
Query: 189 LFIGLIFV---HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
L + + + L + +L G + ++ V VL ++ ++ + + A
Sbjct: 222 LALDTAVLAGAYRILSGVRIPRPQLLQGALLGGVAMGVLKVL-GTALLGGASRNPLLASF 280
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ L++ ++ ++ A A
Sbjct: 281 AVIIGLLIWFNLICQVILICASWIAV 306
>gi|114797118|ref|YP_759209.1| hypothetical protein HNE_0479 [Hyphomonas neptunium ATCC 15444]
gi|114737292|gb|ABI75417.1| putative membrane protein [Hyphomonas neptunium ATCC 15444]
Length = 291
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/286 (15%), Positives = 101/286 (35%), Gaps = 6/286 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ + + D A+ V D + I+ AL S+FP I L F +
Sbjct: 2 LERWRPDLIDPAIRAVRRLVRPDVRIVTGGIAFYALFSIFPLIYMTLTLLTFFLPPELAH 61
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA---AYFSSNGVEALRISLN 117
+ V + + + +E+ + + GL + LAA + +++G +AL +
Sbjct: 62 QLAKPVTNFFSQSVEPLTFEEVDAIQKMTPAGLSVRAFLAAILVLFTATSGAKALITGIR 121
Query: 118 RAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII 177
+ + + S + + ++ + + +A+ + + I
Sbjct: 122 MIAGTADRTRFARFQGTSLLLTATLILVVWLLGALQLIATVAVQEAGGLAMRFASEIATI 181
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKI--MSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ + +A F + L + ++ G ++++ +F Y+
Sbjct: 182 VDSLWISKGIASFGVFYLILLMSLRGHVRRGTKALAAGAGAAAVAFLGVTFVFQLYLQY- 240
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S T+Y +AS++ ++L +LGA L + +P
Sbjct: 241 SVMGTIYGAIASLIFGFIWLSASVSSLLLGAALATEWAHAWGEDEP 286
>gi|320533014|ref|ZP_08033758.1| ribonuclease BN-like family protein [Actinomyces sp. oral taxon 171
str. F0337]
gi|320134771|gb|EFW26975.1| ribonuclease BN-like family protein [Actinomyces sp. oral taxon 171
str. F0337]
Length = 340
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/264 (14%), Positives = 94/264 (35%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWP 71
A + G MA I+ + + SVF +V G ++ + V+D + P
Sbjct: 19 RAPIRYGTARGALMAGGIAYTGMFSVFAVLVIGVSMLMAMLGHYPTIRAAVVDSINSLLP 78
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYR-VVEMR 126
VI ++ V + + ++ A Y + + L+I+L + V +
Sbjct: 79 GVIDTGNGQGMVSVEQLTLTSALNLGSVLAAGAFIYSVISLMGTLKIALRAMFGLVNPVM 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L + L+ +++ + V V + +L
Sbjct: 139 RPVVGQLANLAGFLVIVAGVLVTAVASVVTTTLSGSVGRSLGLPQSLTGTGAWVMTLLLS 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G++ + + + + ++ G + + V + T + + T + + A A
Sbjct: 199 FLIDTGVLALLITMCGIRPPRRDLVQGCMLGAFALGVLRQVGTGAVGSV-TRNPLLASFA 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+I +++L++ +L A A
Sbjct: 258 AIAVLILWLHLTSRVVLLVAAWMA 281
>gi|296454473|ref|YP_003661616.1| ribonuclease BN [Bifidobacterium longum subsp. longum JDM301]
gi|296183904|gb|ADH00786.1| ribonuclease BN [Bifidobacterium longum subsp. longum JDM301]
Length = 288
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 89/267 (33%), Gaps = 8/267 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 22 RVLDRYVSRRGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI- 130
V +T L ++ + + + + +LR ++ + +
Sbjct: 82 GVADSFLTSSALNTMSSTLTWTGLATLAMFWWTVTGWMNSLRHAVRSMFDDCGDELNIVV 141
Query: 131 ---TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
++ + + + V + + + +L++ +
Sbjct: 142 ARLRDTLAAIAIAILFILSTAAGTVSGGMVRRVLQWSGIASSSLPGILLLELTGFCTGVA 201
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
F + + + K+ L G ++ V +L + ++ + + A A+
Sbjct: 202 LNFALFMLLLRVVAHIKAG-RFTLIGASSGSLTVSVMQLLGARLLTG-ASRNPLLAPFAA 259
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
++ LV+ ++ +L A L A
Sbjct: 260 LIGALVWFNLVAQVIMLCAALIAECRR 286
>gi|300172788|ref|YP_003771953.1| ribonuclease BN [Leuconostoc gasicomitatum LMG 18811]
gi|299887166|emb|CBL91134.1| Ribonuclease BN [Leuconostoc gasicomitatum LMG 18811]
Length = 284
Score = 71.2 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/263 (17%), Positives = 103/263 (39%), Gaps = 9/263 (3%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F+ + + ALL+VFP ++ A + + +I ++ P I K +
Sbjct: 25 FLRAQVGYVGPTFAYFALLTVFPMLIAIAIIISITNVSET--NIISLIQSVLPRDIEKIV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ VL+ + L + S L + S + R+S NR V + S ++R SF +
Sbjct: 83 LPILQSVLSSKSTSLLSFSVLLTLWTVSRVIAVFRVSFNRIADVEDRISNLLSRFWSFVW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
+L+ ++ + + L + + + + + L +++ LI ++
Sbjct: 143 LLIIIAAFGVLMISSNILTIVLQQIP-----INQWTSFLQHQTKWLIWLGMWLALIMMNY 197
Query: 199 FLPAA--KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
LP ++ + + G + + + + FT Y Y +++I+ L++L
Sbjct: 198 LLPTKEGRAPLRFVAIGSLIEVGALNILNIGFTWYANLAVKQYGFYQSMSAIIVLLIWLN 257
Query: 257 MLGVFFILGAELNASMIIYYWRK 279
++ + G L + + K
Sbjct: 258 LIATILVTGYVLIQWLTVLKQEK 280
>gi|326774148|ref|ZP_08233430.1| PE-PGRS family protein [Actinomyces viscosus C505]
gi|326636287|gb|EGE37191.1| PE-PGRS family protein [Actinomyces viscosus C505]
Length = 340
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 93/264 (35%), Gaps = 8/264 (3%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH------QFVPTVIDVVF 67
A+ + G MA I+ + + SVF +V G ++ + V ++ ++
Sbjct: 19 RALIRYGTARGALMAGGIAYTGMFSVFAVLVIGVSMLMAMLGQHPTIRAAVVDSINSLLP 78
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVEMR 126
G + + L ++A A Y + + L+I+L + V +
Sbjct: 79 GVIDTGNGRGLVSVEQLTLPSALNLGSVLAAGAFIYSVISLMGTLKIALRAMFGLVNPVM 138
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ +L + L+ +++ + V V + +L
Sbjct: 139 RPVVGQLANIAGFLVIVAGVLVTAVASVVTTTLSGSVGRSLGLPQSLTGTGAWVMTLLLS 198
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ G++ + + + + +L G + + V + T + + T + + A A
Sbjct: 199 FLIDTGVLALLITVCGIRPPRRDLLQGCMLGAFALGVLRQVGTGAVGSV-TRNPLLASFA 257
Query: 247 SIMTCLVFLYMLGVFFILGAELNA 270
+I +++L++ +L A A
Sbjct: 258 AIAVLILWLHLTSRVVLLVAAWMA 281
>gi|109948196|ref|YP_665424.1| tRNA processing ribonuclease BN [Helicobacter acinonychis str.
Sheeba]
gi|109715417|emb|CAK00425.1| tRNA processing ribonuclease BN [Helicobacter acinonychis str.
Sheeba]
Length = 272
Score = 70.8 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/243 (17%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L V ++F P++I
Sbjct: 10 ELFYYASSLSFYTILSLSPILLFVFSLFVSDYMQAHSGEVEALIFPNAPKLIGAIKDFLE 69
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + R
Sbjct: 70 NFKKTNTALGTLE---AVSIVVALVLFCENYRSIASKIFDAKPRDYARCRGKEIFLFWGF 126
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 127 GTTLVFLFALPLVVFFDIKIRVFFEDKNSSLLHVLRWMGTYAFFLILFTIPT------NK 180
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 181 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 240
Query: 263 ILG 265
++G
Sbjct: 241 LIG 243
>gi|108563756|ref|YP_628072.1| putative ribonuclease N [Helicobacter pylori HPAG1]
gi|107837529|gb|ABF85398.1| putative ribonuclease N [Helicobacter pylori HPAG1]
Length = 292
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 93/274 (33%), Gaps = 18/274 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F E + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLRLLRMIFPERLKNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
+ ++F P++I I D + + +
Sbjct: 61 SHYMQAHSGEMEALIFPNAPKLIGA-IKDFLENFKKTDMT--LGTLEEVSIVVALVLFCE 117
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
S+ + R + + TLV + + + + + F
Sbjct: 118 NYRSIASKIFDAKPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDKDS 177
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+LL ++ YA L LF + V FT +SW V FT+Y
Sbjct: 178 SLLHVLRWIGTYAFFLILFTIPT------NKVFKHYFWVFLWVFFTSVSWHVLKWAFTYY 231
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 232 VLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|254386953|ref|ZP_05002235.1| hypothetical protein SSAG_06548 [Streptomyces sp. Mg1]
gi|194345780|gb|EDX26746.1| hypothetical protein SSAG_06548 [Streptomyces sp. Mg1]
Length = 359
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 88/267 (32%), Gaps = 21/267 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F +I A E V + + A+ ++ L+ P + A+ A Q V ++ +FG
Sbjct: 92 FPVITHATERMVGVNIFDSATRLAAQCFLTAVPLLFVLASFAPDAVRMQLVDSI-RAMFG 150
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ ++ + A+ ++ A++ RA+ + R+
Sbjct: 151 LTGQASSQLSDVLDGSAEDDLRNAVGVTGAVIVLLSATAVSRAMQRLCRRAWEI--PRTG 208
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
+ + + A + L+I+ + + + I T L
Sbjct: 209 TRIAIWRWFAWIAAWMVLLIIQ-----------------GPVRDGFGLGLWLGIPLTFLF 251
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGLAS 247
+ L + +LPG + T I+ ++ Y+ S Y S
Sbjct: 252 QTAVWWWSQHLLLGGVIPWLPLLPGAVLTAIAITALSLGARVYMPIALNRSLAAYGSTGS 311
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
+ L +L +L V +G A++
Sbjct: 312 VFVILSWLIVLCVAVAIGISTGAAVAQ 338
>gi|317013172|gb|ADU83780.1| putative ribonuclease N [Helicobacter pylori Lithuania75]
Length = 292
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F NLL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSNLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|291298424|ref|YP_003509702.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
gi|290567644|gb|ADD40609.1| ribonuclease BN [Stackebrandtia nassauensis DSM 44728]
Length = 307
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 94/267 (35%), Gaps = 10/267 (3%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVF 67
FD + A E F D +++ IS A + F + ++ GFL + V D +
Sbjct: 24 FDHFWLAQERFFAVDAGRLSAAISYYAFFAAFSLALLALSVFGFLLKLPRLYTIVEDWLK 83
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
P + + I + A + I+ A + V+ +R S+ + + +
Sbjct: 84 ENLPIIGVETIAE--------SAPTVGMIALGALVITGVSWVQTIRTSIRAVWLLEQEPG 135
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
I R I VL+A L++ + A+ L I+ G ++
Sbjct: 136 NPILRWIIDLLVLIALGILLVGTLAITAVAEVALAWLGDGNDNKALSTAIYYGGTVVGIV 195
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
+ + + LP I+ ++ I L + YI + + Y + +
Sbjct: 196 VNTVLVAALLSALPRLALPFKRIVYPALWVAIGLEGLKTLGSIYIKSAAHR-PAYQAVGT 254
Query: 248 IMTCLVFLYMLGVFFILGAELNASMII 274
+ L+FLY+ + + A+
Sbjct: 255 AVGLLIFLYLFNNMLMFASAWTATSER 281
>gi|319790281|ref|YP_004151914.1| ribonuclease BN [Thermovibrio ammonificans HB-1]
gi|317114783|gb|ADU97273.1| ribonuclease BN [Thermovibrio ammonificans HB-1]
Length = 268
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 16/256 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ A+ E D A+ ++ L+S+ P +F FLG F +
Sbjct: 14 RFVAFALCDTFERDYQFFAASVAYYTLMSIVPLFIFLF----FLGMEVFHVDFKQFIPQQ 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +PI ++I V++ + + +A +FS +L S + +
Sbjct: 70 FLNSPLRPIFEQIEDVVSN-SGIISGTAAAVMLWFSRGIFLSLEKSFSEILGRENPAGFL 128
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ + L + + + + L V + + + L
Sbjct: 129 YRHIVIILVIFLLWILMFFFYVAQYLLAILLPQVPE-----------LSFLSSLLVPVLL 177
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L V+ FL K + + F ++ + F +IV S S +Y A+++
Sbjct: 178 FLVLFGVYYFLLPVKVPMGFVFKVSTFVFLLLALFERFFVWFIVHVSKVSILYGSFAAVI 237
Query: 250 TCLVFLYMLGVFFILG 265
L+++Y ++G
Sbjct: 238 IFLLWIYYSATVILIG 253
>gi|254779925|ref|YP_003058031.1| Ribonuclease N; putative membrane protein [Helicobacter pylori B38]
gi|254001837|emb|CAX30080.1| Ribonuclease N; putative membrane protein [Helicobacter pylori B38]
Length = 292
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F NLL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSNLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|224282267|ref|ZP_03645589.1| ribonuclease BN [Bifidobacterium bifidum NCIMB 41171]
Length = 305
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/273 (12%), Positives = 92/273 (33%), Gaps = 4/273 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+ I+ +V G +A+ ++ L + F + G + G+ + T++
Sbjct: 17 WWRRSLTGRVIDRYVSRRGPLLANGLAYGLLFAFFAGAWIVVSALGLVVTGSEEMQKTLL 76
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ P V + +L ++ ++ + + + +LR ++ +
Sbjct: 77 AMLRTVIPSVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTGWMNSLRNAVTTMFDDC 136
Query: 124 EMRSWYI--TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + +++A + ++ + V+ L +R A +L +
Sbjct: 137 TQELNVVKARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRALGIADDSLPGALLLES 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L +F+ L A + V L ++T ++ + M
Sbjct: 197 TGFATGVLLNFALFMLLLRVVAHIRAGKFTLVGAALGALAVAVMQLLGARLLTGASRNPM 256
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
A A+I+ L++ ++ ++ A A
Sbjct: 257 LAPFAAIIGVLIWFNLVAQVIMICAAFIAECRR 289
>gi|148985239|ref|ZP_01818462.1| ribonuclease BN, putative [Streptococcus pneumoniae SP3-BS71]
gi|147922437|gb|EDK73556.1| ribonuclease BN, putative [Streptococcus pneumoniae SP3-BS71]
Length = 204
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/164 (16%), Positives = 69/164 (42%), Gaps = 4/164 (2%)
Query: 1 MREYFCIVFD--IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQF 58
M++++ + D ++ + ++ D + ++ L+S+FP ++ N+ +
Sbjct: 1 MKKWWKELIDKPLLKAFLHYYQASDSELTSVAVAYYWLISIFPLLLVVVNILPYFQIP-- 58
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
V + + P + + + +VL P+ GL + S L+A + S + L+ + N+
Sbjct: 59 VGEFLGFMKDVLPPSLYEGVEKIAREVLTQPSTGLLSFSVLSALWSFSKSMNFLQKAFNK 118
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
AY V + R +++S + F+ + + +
Sbjct: 119 AYGVEKSRGLISHQMLSLLVSFGLQLLFAFALFLILFGQMIFGF 162
>gi|213691701|ref|YP_002322287.1| ribonuclease BN [Bifidobacterium longum subsp. infantis ATCC 15697]
gi|213523162|gb|ACJ51909.1| ribonuclease BN [Bifidobacterium longum subsp. infantis ATCC 15697]
gi|320457792|dbj|BAJ68413.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 288
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 97/263 (36%), Gaps = 6/263 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 22 RVLDRYVSRRGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYI 130
V +T L ++ + + + + +LR ++ + + + +
Sbjct: 82 GVADSFLTSSALGAMSSALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVV 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI--YATMLA 188
RL + ++ ++ + + + ++ + L I + + T +A
Sbjct: 142 ARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGIVLLEMTGFGTGVA 201
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L + L + + + G + ++ +L + ++ + M A A++
Sbjct: 202 LNFALFMLLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGARLLAG-ASRNPMLAPFAAL 260
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++ ++ +L A L A
Sbjct: 261 IGVLIWFNLVAQVILLCAALIAE 283
>gi|291319981|ref|YP_003515239.1| hypothetical protein MAGa0460 [Mycoplasma agalactiae]
gi|290752310|emb|CBH40281.1| Conserved Hypothetical protein [Mycoplasma agalactiae]
Length = 344
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/279 (16%), Positives = 104/279 (37%), Gaps = 7/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + +++ + F + + + +L+S P I+ + +
Sbjct: 60 LKKNKNKLSELVGRVYKRFTSREFVFIPVSFAFYSLVSFIPIIMSVSVAISLIPGDFSSL 119
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ P + + I Q L LA+ SS+G S+N Y
Sbjct: 120 FNDEILRRIIPG--LESFINSIPQTWNAKTYILIITLFLASLIISSSGFGKFTYSINYIY 177
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +++ RL F V+ ++ + I S +++++ + I+++
Sbjct: 178 KHETTGNYFFNRLKGFLIVVCIALYIFISSLLYLSVYKLFGVHKASDLGRSIYFYIVFSL 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
ML L++GL + PA K S+LPGV+ + +V +F + Y
Sbjct: 238 ---YLMLNLYVGLSLLFKVSPAFKVPWSSLLPGVLIASLPTMVFITIFGYLTSLIDYYK- 293
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ M + + + F LG NA+ ++ +
Sbjct: 294 -FGIFGIFMYIALLVSTMSYFMYLGIITNAAFYKTFYSR 331
>gi|160933187|ref|ZP_02080576.1| hypothetical protein CLOLEP_02032 [Clostridium leptum DSM 753]
gi|156868261|gb|EDO61633.1| hypothetical protein CLOLEP_02032 [Clostridium leptum DSM 753]
Length = 145
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 61/136 (44%)
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ + + + L ++ + P + + R LF+ L+ ++ +P
Sbjct: 1 MIVFVALGLMTFGKNLLTWLSGWIPIDMGSISLWNLLRFVILAAVLFMVLLTLYYLVPNR 60
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ ++PG + +SW+V ++ F Y+ YS +Y + + + L++LY + I
Sbjct: 61 LYTVRQVMPGTFASLLSWLVFSIGFAFYVENMGRYSVVYGSIGAAIVLLLWLYFSAITLI 120
Query: 264 LGAELNASMIIYYWRK 279
+GAELN ++ +K
Sbjct: 121 MGAELNYLLVNRPSKK 136
>gi|284990788|ref|YP_003409342.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284064033|gb|ADB74971.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 328
Score = 70.1 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 48/260 (18%), Positives = 98/260 (37%), Gaps = 12/260 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F+++D +A+ I+ LS+FP ++ A + G + G + ++D G +P
Sbjct: 23 VVYKFMDDDAHFLAALITYYGFLSLFPTLLLLATVLGLVLAGDPELQQRLLDSALGEFPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + E L + L A Y + +AL+ ++N + V R
Sbjct: 83 IGPQLARPEGLGGGVT----GIVVGGLVALYGALGLGQALQHAMNTVWAV--PRHSRPDP 136
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ S G LL TL ++ + A G + A++LA
Sbjct: 137 ITSRGRSLLLLCTLGLLLLAST---VLSALGTGAAAYGGGFSGGVHVLLTVASVLANAAV 193
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTC 251
+ + + +LPG + + W + Y+ + S + A A ++
Sbjct: 194 FVLGFRVTTSRRLTTRQVLPGAVTAAVLWQLLQSFGGVYVARVVANASAVDAVFALVLGL 253
Query: 252 LVFLYMLGVFFILGAELNAS 271
+ F+Y+ V +L E++
Sbjct: 254 IAFIYVAAVALMLCVEIDVV 273
>gi|308183498|ref|YP_003927625.1| putative ribonuclease N [Helicobacter pylori PeCan4]
gi|308065683|gb|ADO07575.1| putative ribonuclease N [Helicobacter pylori PeCan4]
Length = 292
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|208435278|ref|YP_002266944.1| putative ribonuclease N [Helicobacter pylori G27]
gi|208433207|gb|ACI28078.1| putative ribonuclease N [Helicobacter pylori G27]
Length = 292
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F NLL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDMKIQVFFEDKDSNLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|311063605|ref|YP_003970330.1| ribonuclease BN [Bifidobacterium bifidum PRL2010]
gi|310865924|gb|ADP35293.1| Ribonuclease BN [Bifidobacterium bifidum PRL2010]
Length = 306
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 93/270 (34%), Gaps = 4/270 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
+I I+ +V G +A+ ++ L + F + + G + G+ + ++
Sbjct: 17 WWRRSLIGRVIDRYVSRRGPLLANGLAYGLLFAFFAGVWIVVSALGLVVTGSEEMQKALL 76
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ P V + +L ++ ++ + + + +LR ++ +
Sbjct: 77 AMLRTVIPSVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTGWMNSLRNAVTTMFDDC 136
Query: 124 EMRSWYI--TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
+ + +++A + ++ + V+ L +R A +L +
Sbjct: 137 TQELNVVKARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRALGIADDSLPGALLLES 196
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
L +F+ L A + V L ++T ++ + M
Sbjct: 197 TGFATGVLLNFALFMLLLRVVAHIRAGKFTLVGAALGALAVAVMQLLGARLLTGASRNPM 256
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAELNAS 271
A A+I+ L++ ++ ++ A A
Sbjct: 257 LAPFAAIIGVLIWFNLVAQVIMICAAFIAE 286
>gi|15612364|ref|NP_224017.1| putative ribonuclease N [Helicobacter pylori J99]
gi|4155908|gb|AAD06877.1| putative ribonuclease N [Helicobacter pylori J99]
Length = 292
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|256389866|ref|YP_003111430.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256356092|gb|ACU69589.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 294
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/268 (11%), Positives = 77/268 (28%), Gaps = 13/268 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ + ++ A +S+FP ++ + G + Q V++ +P
Sbjct: 33 VFRELQVMKAGYLGAMLTFFAFISLFPLLLILTTVLGAVLRSNPQLQQDVLNSALVDFPV 92
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + + IS + + A + ++N + V E R
Sbjct: 93 IGEQLKNNIHDF---GRSGVALLISIIVTVIGALGLANAAQYAMNLLWGVPEDRRPG--F 147
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
S+ L T+ + + + + G + A+ + +
Sbjct: 148 PQSWLRSLGIIGTMGLGVLSTTVMTALGEWAGGHV-----FTAGLRAGLLAASFVLTALL 202
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTC 251
A + + I T + W L ST+Y ++
Sbjct: 203 FWLGMRAATAPEVAARDLRLAAILTTLFWQGLQYLGGFIAAHQLRHASTLYGVFGLVLGL 262
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L ++Y+ ++ + W +
Sbjct: 263 LAWIYLQARLTLVAVASDVVRARRTWPR 290
>gi|298737047|ref|YP_003729577.1| hypothetical protein HPB8_1556 [Helicobacter pylori B8]
gi|298356241|emb|CBI67113.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 292
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYMQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F NLL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSNLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|308185167|ref|YP_003929300.1| putative ribonuclease N [Helicobacter pylori SJM180]
gi|308061087|gb|ADO02983.1| putative ribonuclease N [Helicobacter pylori SJM180]
Length = 292
Score = 69.7 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F NLL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSNLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|218513787|ref|ZP_03510627.1| putative ribonuclease protein [Rhizobium etli 8C-3]
Length = 161
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 60/133 (45%), Positives = 96/133 (72%)
Query: 147 VIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
+S + VA+PLAL Y R +FP + L I+++ RIY T++ L +GL+ +HL+LPA K +
Sbjct: 1 AAISILLVAVPLALDYARNWFPLFADTLDIVFSWRIYGTLVVLTVGLLVMHLWLPAGKRR 60
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ ++PGV+ T + W+ GA++F +Y+ TF+ Y+ YAGLAS+M L+FLYM+GV FI+GA
Sbjct: 61 VFDVIPGVLLTLLLWLAGALIFAYYLATFANYTATYAGLASVMIVLIFLYMVGVIFIIGA 120
Query: 267 ELNASMIIYYWRK 279
E+NA++I + +
Sbjct: 121 EINAALIKFRVFR 133
>gi|210135569|ref|YP_002302008.1| ribonuclease N [Helicobacter pylori P12]
gi|210133537|gb|ACJ08528.1| ribonuclease N [Helicobacter pylori P12]
Length = 292
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDVT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSRLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|308064162|gb|ADO06049.1| putative ribonuclease N [Helicobacter pylori Sat464]
Length = 292
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 81/244 (33%), Gaps = 11/244 (4%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L ++ + K I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLF----VSNYMQAHSGEMEALIFPNAPKLIGAIK 87
Query: 83 LQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ + + + + S+ + R + +
Sbjct: 88 DFLENFKKTDMTLGTFEEVSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWG 147
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
TLV + + + + + F +LL ++ YA L LF
Sbjct: 148 FGTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPT------N 201
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 202 KVFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLV 261
Query: 262 FILG 265
++G
Sbjct: 262 ILIG 265
>gi|308189712|ref|YP_003922643.1| hypothetical protein MFE_01410 [Mycoplasma fermentans JER]
gi|307624454|gb|ADN68759.1| conserved hypothetical membrane spanning protein [Mycoplasma
fermentans JER]
Length = 349
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 9/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I + F ++ + + L+S P I L + + + I+ V
Sbjct: 76 ELINRTYKKFTDKSFVFIPLSTAFYFLVSFVPIITIMIVLLSLIPGYHTL--FINEVLTR 133
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I L I LA+ + +S+G S N Y + +W+
Sbjct: 134 IIPGVTSIIKIPDTTKKGAQLTSL-IILCLASLWMASSGFGKFIYSQNYIYGHENLGNWF 192
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ VL S+ L + + +++ Y + + + ++ L
Sbjct: 193 TNRIKGLFVVLGISIYLFLAAALYLFFYQTFTYNMSTYHKNIYF----YITFSFYLLIML 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ GL ++ P+ K ++ PGV+ T ++ +F + + Y Y + S M
Sbjct: 249 YFGLTLLYTMSPSFKLSWTTVFPGVLITSFPVMIFITIFGF-LTSLINYDK-YGIIGSFM 306
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+F+ L F LG +N + Y
Sbjct: 307 YIALFVSFLTYFMFLGIIVNEAYYKTY 333
>gi|144897642|emb|CAM74506.1| conserved hypothetical protein, membrane [Magnetospirillum
gryphiswaldense MSR-1]
Length = 224
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/229 (10%), Positives = 67/229 (29%), Gaps = 8/229 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R V++ + A+ ++ MA ++ ++LLS+ P + A V
Sbjct: 4 RATAWQVWEFLRFAVRRGRDDGVSRMAGSLAFTSLLSLVPLFAIALAMLAAFPAFDSVRQ 63
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ + + A L + L+ + + + ++N +R
Sbjct: 64 DLVSWSFRTFAPTIGDVVQLQINRFIDNAGRLSAVGILSLVITAIMLLVTIEGTMNAIFR 123
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
V + RS L+ + + L + + + + + +
Sbjct: 124 VAKARSPLSKLLVYWTALTLGPLLMGAALSLQGYVTAWSRWSVGK--------ALTPVLA 175
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
+ + + +P + + L G + + + F
Sbjct: 176 LPLPTTLTILAFAVMFAAVPNRRVAVRDALWGALAAALLFAALCWGFGL 224
>gi|282850971|ref|ZP_06260345.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
gi|282557923|gb|EFB63511.1| conserved hypothetical protein [Lactobacillus gasseri 224-1]
Length = 188
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 58/144 (40%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
F ++ I+ FVF + ++ F + + N R +L I ++
Sbjct: 22 FALSVILVAGFSIIIFVFTFGRQIMEFLAPIFNLSLWWVYKLENYRWPIIILMTVIINLY 81
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
++ +P + + PGV FT SW + F Y+ F T Y + S + +++L
Sbjct: 82 INYVIPNISVQKRVVWPGVCFTVASWGALSYFFGLYLRQFGTRWQNYGIVGSFIIFMLWL 141
Query: 256 YMLGVFFILGAELNASMIIYYWRK 279
+ +LG +NA+ RK
Sbjct: 142 NIGSFLLLLGICINATGDELKDRK 165
>gi|325996663|gb|ADZ52068.1| Ribonuclease BN [Helicobacter pylori 2018]
gi|325998253|gb|ADZ50461.1| putative Ribonuclease N [Helicobacter pylori 2017]
Length = 292
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHALKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|325123559|gb|ADY83082.1| putative ribonuclease (Rbn) [Acinetobacter calcoaceticus PHEA-2]
Length = 211
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 63/197 (31%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+ Y F + + F + A ++ + L +V P + + + A +
Sbjct: 9 LPFYNKTWFQFVLYVFKRFEADRCREQAGSLTYTTLFAVVPMLTVFLVIISSIKALEPAR 68
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + D+ L + L I L + + ++ NR +
Sbjct: 69 QQLQHLIYSNFLPKSTIAFDKALNAFTEKSSNLTVIGVLFLFVTTVLMLTSIETVFNRIW 128
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
RV E RS + + + + L + L + + F + ++W
Sbjct: 129 RVKETRSGIMGFMRYWTIISLGPIILGSAFVISSTVASMNLLSNNFTGYQLDGAFLLWLI 188
Query: 181 RIYATMLALFIGLIFVH 197
T+L FI +
Sbjct: 189 SFVLTILGFFILYWTIP 205
>gi|319776898|ref|YP_004136549.1| ribonuclease bn-like family enzyme [Mycoplasma fermentans M64]
gi|318037973|gb|ADV34172.1| Ribonuclease BN-like family enzyme [Mycoplasma fermentans M64]
Length = 349
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 9/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I + F ++ + + L+S P I L + + + I+ V
Sbjct: 76 ELINRTYKKFTDKSFVFIPLSTAFYFLVSFVPIITIMIVLLSLIPGYHTL--FINEVLTR 133
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I L I LA+ + +S+G S N Y + +W+
Sbjct: 134 IIPGVTSIIKIPDTTKKGAQLTSL-IILCLASLWMASSGFGKFIYSQNYIYGHENLGNWF 192
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ VL S+ L + + +++ Y + + + ++ L
Sbjct: 193 TNRIKGLFVVLGISIYLFLAAALYLFFYQTFTYNMSTYHKNIYF----YITFSFYLLIML 248
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ GL ++ P+ K ++ PGV+ T ++ +F + + Y Y + S M
Sbjct: 249 YFGLTLLYTMSPSFKLSWTTVFPGVLITSFPVMIFITIFGF-LTSLINYDK-YGIIGSFM 306
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+F+ L F LG +N + Y
Sbjct: 307 YIALFVSFLTYFMFLGIIVNEAYYKTY 333
>gi|15646017|ref|NP_208198.1| putative ribonuclease N [Helicobacter pylori 26695]
gi|2314579|gb|AAD08449.1| conserved hypothetical integral membrane protein [Helicobacter
pylori 26695]
Length = 292
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F NLL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKNSNLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|317014780|gb|ADU82216.1| putative ribonuclease N [Helicobacter pylori Gambia94/24]
Length = 292
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|23464751|ref|NP_695354.1| hypothetical protein BL0125 [Bifidobacterium longum NCC2705]
gi|23325321|gb|AAN23990.1| narrowly conserved hypothetical membrane protein [Bifidobacterium
longum NCC2705]
Length = 288
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 96/263 (36%), Gaps = 6/263 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWP 71
+ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 22 RVFDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYI 130
V +T L ++ + + + + +LR ++ + + + +
Sbjct: 82 GVADSFLTSSALGAMSSALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVV 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLA 188
RL + ++ ++ + + + ++ + L ++ + T +A
Sbjct: 142 ARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVA 201
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L + L + + + G + ++ +L + ++ + M A A++
Sbjct: 202 LNFALFMLLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGARLLAG-ASRNPMLAPFAAL 260
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++ ++ +L A L A
Sbjct: 261 IGVLIWFNLVAQVILLCAALIAE 283
>gi|213420053|ref|ZP_03353119.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 184
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 52/158 (32%), Gaps = 2/158 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
R + + + + L + + +
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSL 167
>gi|119962009|ref|YP_947024.1| ribonuclease BN-like family protein [Arthrobacter aurescens TC1]
gi|119948868|gb|ABM07779.1| putative ribonuclease BN-like family [Arthrobacter aurescens TC1]
Length = 308
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 49/266 (18%), Positives = 100/266 (37%), Gaps = 9/266 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
A +H+ + G +++ I + SV + G +AG + G VID V A
Sbjct: 18 MRAFQHYTRQHGPLLSAGIGFNMFFSVTGLLTTGFAIAGIVLGGNPALQDAVIDSVAAAA 77
Query: 71 PE----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-M 125
P + + D + I+A+ + S + ++R L + +
Sbjct: 78 PGLLQVNGGEGLVDPQSLLNPSGLGWTALIAAVVTVFVSLGWIASIREGLRGIMKADPLV 137
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL-LIIWNGRIYA 184
R+ + +LI G +LL V LVI + V + +A ++ + I +I
Sbjct: 138 RNPIVQKLIDAGTLLLLGVILVISAGVSLVFGIAADWLIALLKLDEGITEPIAAIVKIVV 197
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ + K + L GV+ + V F+ ++ S + + A
Sbjct: 198 PLVLNCATAAVLFRIAGGLKLGRRAFLEGVVLAGVGTTVLQF-FSTELLARSGNNPVLAS 256
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
A I+ L++ ++ ++ A +A
Sbjct: 257 FAIIIGLLIWFNLVSQVCLVSASWSA 282
>gi|239620843|ref|ZP_04663874.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239516419|gb|EEQ56286.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 288
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 97/263 (36%), Gaps = 6/263 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 22 RVLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYI 130
V +T L ++ + + + + +LR ++ + + + +
Sbjct: 82 GVADSFLTSSALGTMSSALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVV 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLA 188
RL + ++ ++ + + + ++ + L ++ + T +A
Sbjct: 142 ARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVA 201
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L + L + + + G + ++ +L + ++ + M A A++
Sbjct: 202 LNFALFMLLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGARLLAG-ASRNPMLAPFAAL 260
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++ ++ +L A L A
Sbjct: 261 IGVLIWFNLVAQVILLCAALIAE 283
>gi|317481578|ref|ZP_07940614.1| ribonuclease BN-like family protein [Bifidobacterium sp.
12_1_47BFAA]
gi|316916938|gb|EFV38324.1| ribonuclease BN-like family protein [Bifidobacterium sp.
12_1_47BFAA]
Length = 288
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 97/263 (36%), Gaps = 6/263 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 22 RVLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYI 130
V +T L ++ + + + + +LR ++ + + + +
Sbjct: 82 GVADSFLTSSALGAMSSALTWTGLATLAIFWWTVTGWMNSLRHAVRTMFDDCGDELNIVV 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLA 188
RL + ++ ++ + + + ++ + L ++ + T +A
Sbjct: 142 ARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVA 201
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L + L + + + G + ++ +L + ++ + M A A++
Sbjct: 202 LNFALFMLLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGARLLAG-ASRNPMLAPFAAL 260
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++ ++ +L A L A
Sbjct: 261 IGVLIWFNLVAQVILLCAALIAE 283
>gi|188528174|ref|YP_001910861.1| putative ribonuclease N [Helicobacter pylori Shi470]
gi|188144414|gb|ACD48831.1| putative ribonuclease N [Helicobacter pylori Shi470]
Length = 292
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 81/244 (33%), Gaps = 11/244 (4%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L ++ + K I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLF----VSNYMQAHSGEMEALIFPNAPKLIGAIK 87
Query: 83 LQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ + + + + S+ + R + +
Sbjct: 88 DFLENFKKTDMTLGTFEEVSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWG 147
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
TLV + + + + + F +LL ++ YA L LF
Sbjct: 148 FGTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPT------N 201
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 202 KVFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLV 261
Query: 262 FILG 265
++G
Sbjct: 262 ILIG 265
>gi|307638058|gb|ADN80508.1| Ribonuclease BN [Helicobacter pylori 908]
Length = 292
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYLQAHSGEMEALIFPNAPKLIGA-IKDFL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 91 ENFKKTDMT--LGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHALKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|15835027|ref|NP_296786.1| hypothetical protein TC0409 [Chlamydia muridarum Nigg]
gi|270285193|ref|ZP_06194587.1| hypothetical protein CmurN_02048 [Chlamydia muridarum Nigg]
gi|270289212|ref|ZP_06195514.1| hypothetical protein CmurW_02108 [Chlamydia muridarum Weiss]
gi|301336589|ref|ZP_07224791.1| hypothetical protein CmurM_02100 [Chlamydia muridarum MopnTet14]
gi|7190450|gb|AAF39265.1| conserved hypothetical protein [Chlamydia muridarum Nigg]
Length = 425
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 80/245 (32%), Gaps = 2/245 (0%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ A + + A +S L S P +VF L+ +L + +
Sbjct: 19 FIIKSFLKAPKVLYYNEASKEACILSYYGLFSCIPILVFFLRLSQYLFISLDWKEWLLLH 78
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ + I ++ + + + +++L LN+ + +
Sbjct: 79 YPDYETPILAIFEAAYSTTSSIVVVLVSSFFVFC--WAGILMLQSLEDGLNKIFCPGITQ 136
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ + L++ + +I+ ++ I + + + + I+
Sbjct: 137 ASLKRLISYLIITLISPMIFIIVCGSWIYITQIMPISYPKLFSFSHAMACIYVISRILPY 196
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
L+ GL + FLP ++ S L +WV+ +F + YS Y L
Sbjct: 197 ALLYGGLFCCYAFLPRVPTQKSSSLLAAAIAGSAWVISQKIFFCLQLYIFNYSFTYGALV 256
Query: 247 SIMTC 251
++ +
Sbjct: 257 ALPSF 261
>gi|266625409|ref|ZP_06118344.1| YihY family protein [Clostridium hathewayi DSM 13479]
gi|288862689|gb|EFC94987.1| YihY family protein [Clostridium hathewayi DSM 13479]
Length = 121
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 46/92 (50%)
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
+L L I F++ ++P K LPG +F+ + W+ + F+ Y FS +
Sbjct: 15 ISFRTVLLLILTICFTFLYTYVPEKKQHFKKQLPGAVFSTLGWIAFSFAFSIYFNNFSNF 74
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
S MY L +I+ +++LY+ LGAE+N
Sbjct: 75 SVMYGSLTAIVLLMLWLYVCICILFLGAEINY 106
>gi|148377313|ref|YP_001256189.1| hypothetical protein MAG_0450 [Mycoplasma agalactiae PG2]
gi|148291359|emb|CAL58742.1| Conserved Hypothetical protein [Mycoplasma agalactiae PG2]
Length = 344
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 47/279 (16%), Positives = 105/279 (37%), Gaps = 7/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+++ + +++ + F + + + +L+S P I+ + + +
Sbjct: 60 LKKNKNKLSELVGRVYKRFTSREFVFIPVSFAFYSLVSFIPIIMSVSVAISLIPGNFSSL 119
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ P + + I Q L LA+ SS+G S+N Y
Sbjct: 120 FNDEILRRIIPG--LESFINSIPQTWNAKTYILIITLFLASLIISSSGFGKFTYSINYIY 177
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +++ RL F V+ ++ + I S ++++I + I+++
Sbjct: 178 KHETTGNYFFNRLKGFLIVVCIALYIFISSLLYLSIYKLFGVHKASDLGRSIYFYIVFSL 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
ML L++GL + PA K S+LPGV+ + +V +F + Y
Sbjct: 238 ---YLMLNLYVGLSLLFKVSPAFKVPWSSLLPGVLIASLPTMVFITIFGYLTSLIDYYK- 293
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ M + + + F LG NA+ ++ +
Sbjct: 294 -FGIFGIFMYIALLVSTMSYFMYLGIITNAAFYKTFYSR 331
>gi|227432518|ref|ZP_03914502.1| ribonuclease BN family protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351696|gb|EEJ41938.1| ribonuclease BN family protein [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 280
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 48/262 (18%), Positives = 99/262 (37%), Gaps = 7/262 (2%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
F + + ALL+VFP ++ A + F ++ ++ P+ I +
Sbjct: 25 FTRSQIGYVGPTFAYYALLTVFPILMGAALIVSFTSISTA--DLLAMMRNVLPKNIENIV 82
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ VL+ + L + S L + S + R S N V E + TR SF +
Sbjct: 83 FPIMESVLSSRSTSLLSFSVLFTIWSISRVIAVFRQSFNAIADVNEHINSLFTRAFSFIW 142
Query: 139 VLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM-LALFIGLIFVH 197
+L ++ + + + L V + P + R + + + L + ++
Sbjct: 143 LL----FILTLFALLMVGSNVLTIVIQHLPYSEWTNFLQHQTRWFIWLGIWLALVMMNFF 198
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
L A++ +L G + + FT Y Y ++S++ L++L +
Sbjct: 199 LPAKDARAPFRFVLVGGFLELVMLNLLNRGFTFYAQFALGKYDFYQSVSSMIAMLIWLNL 258
Query: 258 LGVFFILGAELNASMIIYYWRK 279
+ +LG + + + WRK
Sbjct: 259 IATILVLGYVVIKWLSVINWRK 280
>gi|227546866|ref|ZP_03976915.1| ribonuclease BN [Bifidobacterium longum subsp. infantis ATCC 55813]
gi|227212828|gb|EEI80709.1| ribonuclease BN [Bifidobacterium longum subsp. infantis ATCC 55813]
Length = 288
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 97/263 (36%), Gaps = 6/263 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWP 71
++ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 22 RVLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIP 81
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYI 130
V +T L ++ + + + + +LR ++ + + + +
Sbjct: 82 GVADSFLTSSALGTMSSALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVV 141
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI--YATMLA 188
RL + ++ ++ + + + ++ + L I + + T +A
Sbjct: 142 ARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGIVLLEMTGFGTGVA 201
Query: 189 LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
L L + L + + + G + ++ +L + ++ + M A A++
Sbjct: 202 LNFALFMLLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGARLLAG-ASRNPMLAPFAAL 260
Query: 249 MTCLVFLYMLGVFFILGAELNAS 271
+ L++ ++ +L A L A
Sbjct: 261 IGVLIWFNLVAQVILLCAALIAE 283
>gi|293390889|ref|ZP_06635223.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951423|gb|EFE01542.1| ribonuclease BN [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 122
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 48/101 (47%)
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L+ + +++ +P K I G + + + +G F YIVTF +Y
Sbjct: 14 LLSFVPFLSTWFIFTVIYMAVPNKKVSIKHSAAGALIAAVFFTLGKQAFAWYIVTFPSYQ 73
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +A++ L+++ + F +LGA+L A + +K+
Sbjct: 74 LIYGAMATLPIMLLWIQLSWTFVLLGAQLAAVLAEVRSKKQ 114
>gi|213580432|ref|ZP_03362258.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 164
Score = 68.9 bits (167), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 52/155 (33%), Gaps = 2/155 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
+ +F + I I Q +A K + + A + + A+ +LN +R
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDSALNTIWR 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
R + + + + L + + +
Sbjct: 130 SKRTRPKVYSFAVYWMILTLGPLLAGASLAISSYL 164
>gi|289580689|ref|YP_003479155.1| ribonuclease BN [Natrialba magadii ATCC 43099]
gi|289530242|gb|ADD04593.1| ribonuclease BN [Natrialba magadii ATCC 43099]
Length = 301
Score = 68.5 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/261 (14%), Positives = 88/261 (33%), Gaps = 7/261 (2%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ + A+ ++ A ++ P ++ + A + + I+ G
Sbjct: 26 LARSVAAVARKRQISVTAAGLAYHAFNTLVPLVILLLVGMSLVDALEPLLETIEEAAGL- 84
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
E + E+ + ++ + + +A+ + Y + +S+
Sbjct: 85 -EGMLTSDASEVTGGAGIDLARAGVLALAILLWSGARLFQAVNSAFTDIYGSRKDQSYVG 143
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + + L + + VA+ + F + + F
Sbjct: 144 SAVTVTIVTAFNTALLTVTVALGVALISIVGVSASVFLGGVAAAAVSSVVLLVLLTALFF 203
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
++ P A +LPG F +SW V A+ F Y+ T + ++ +I+
Sbjct: 204 ----PMYYLFPQADVSAREVLPGTAFAALSWTVLALGFRLYVATSESV-ALFGIAGAILL 258
Query: 251 CLVFLYMLGVFFILGAELNAS 271
L ++Y G +LGA LNA
Sbjct: 259 ILTWVYFGGFCLLLGAILNAV 279
>gi|148241463|ref|YP_001226620.1| ribonuclease BN-like family protein [Synechococcus sp. RCC307]
gi|147849773|emb|CAK27267.1| Ribonuclease BN-like family protein [Synechococcus sp. RCC307]
Length = 310
Score = 68.5 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/286 (13%), Positives = 98/286 (34%), Gaps = 20/286 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANL-AGFLGAHQFVPTVIDVVFGAW 70
+ A + + +++ + +L S FPF++ + A G + V
Sbjct: 11 LQLACQVWNRHGCVDLSAAFAFHSLQSFFPFLLVCLGVGARLFGQVDGASDQLLAVAAGV 70
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR------------ 118
+ + ILQ L + I L + +SN +L+ +R
Sbjct: 71 LPPGGLEVMEGILQRLVNQGQVAEQIGGLVLIFSASNATLSLQRGADRLWYGLALPNAGD 130
Query: 119 -AYRVVEMRSWYITRLISFGYVLLASVTLVIMS-----FVFVAIPLALAYVRKFFPALGN 172
A+ R ++ +LLA V L+ ++ ++ +L + + P
Sbjct: 131 QAWHWHLRRWFFQRLKAIGAALLLALVLLINQITTPFRLLWSSMWSSLGSLSPWLPQPWE 190
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ + + L + I + + +LP+ + ++ + G + + L +
Sbjct: 191 V-PARTLISVLGSWLGVVIATVLLFSYLPSRRPRLGLLWQGSLLVATGLTLVNPLLGRAL 249
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
V + Y + I+ +++++LG+ G ++
Sbjct: 250 VWAGSRFLAYGLVGGIILLTLWIWLLGLILYFGMAWTVALTQRRQP 295
>gi|330465688|ref|YP_004403431.1| ribonuclease bn [Verrucosispora maris AB-18-032]
gi|328808659|gb|AEB42831.1| ribonuclease bn [Verrucosispora maris AB-18-032]
Length = 306
Score = 68.5 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 39/276 (14%), Positives = 89/276 (32%), Gaps = 15/276 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVP 60
+ F ++ A + + G +A+ I+ +VF + G +
Sbjct: 19 RHRWPAFGHLWRAGVRYTDLQGGRLAAAIAYYGFFAVFALALVAYAAFGAVLDDNDEVRA 78
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + P + + D + + + L VEA+R S +
Sbjct: 79 AAEEFLGENLPFLDPAQVAD--------SSGTVGVVGLLILILTGIGWVEAIRSSQRLIH 130
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + + R + VLL L+ S V +L +
Sbjct: 131 GLHQHPGNLVVRRLVDLGVLLVVFVLLGASVAAVDALESLLRFLLRSTGSVG----LTTI 186
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
++L + + + +P + + P V+ + + + ++ ++
Sbjct: 187 SAVLSVLVNAVLATLMLIVVPRVQMSRARLRPIVLLVAVGITLLNTVGRFWVGRV-EHNP 245
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
Y +A+ + LV+LY+L + GA L A+
Sbjct: 246 AYTVVATAVGLLVYLYLLNQLVLFGAALAATSRRGR 281
>gi|317178107|dbj|BAJ55896.1| putative ribonuclease N [Helicobacter pylori F16]
Length = 292
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/274 (17%), Positives = 92/274 (33%), Gaps = 18/274 (6%)
Query: 1 MREYFCIVFDIIYDAIEHFVEE---------DGWAMASHISLSALLSVFPFIVFGANLAG 51
MRE+F V + F + + + AS +S +LS+ P ++F +L
Sbjct: 1 MREFFKSVRGFLRLLRMIFPKHFQNAFLGLSELFYYASSLSFYTILSLSPILLFVFSLFV 60
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
+ ++F P++I A G + +
Sbjct: 61 SSYMQAHSGEMEALIFPNAPKLIGAIKDFLENFKKTDIALGTLEE---VSILVALVLFCE 117
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
S+ + R + + TLV + + + + + F
Sbjct: 118 NYRSIASKIFQAKPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFDIKIQVFFEDKNS 177
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
NLL ++ YA L LF + V FT +SW V FT+Y
Sbjct: 178 NLLHVLRWIGTYAFFLILFTIPT------NKVFKHYFWVFLWVFFTSVSWHVLKWAFTYY 231
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 232 VLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 265
>gi|220911969|ref|YP_002487278.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
gi|219858847|gb|ACL39189.1| ribonuclease BN [Arthrobacter chlorophenolicus A6]
Length = 324
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/267 (16%), Positives = 97/267 (36%), Gaps = 9/267 (3%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAW 70
H+ + G M++ I + S+ + G ++AG + G + +++ V +
Sbjct: 34 MRVFRHYSLQHGPLMSAGIGFNMFFSITGLLATGFSVAGLVLRGQPALLDSIVSSVAASA 93
Query: 71 PE----VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-M 125
P + D + I+A+ S + LR L + +
Sbjct: 94 PGLLKVDGGTGLVDPQDMLNPQGLGLTAIIAAIVTIITSLGWINGLRDGLRGVMELPPLV 153
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL-IIWNGRIYA 184
+ + +L G +LL V LVI + + A +V + + +I
Sbjct: 154 VNPVVLKLRDAGTLLLLGVALVISAGASLIFGTAAGWVSDVLHLDDAVAGPLTTLIKIAV 213
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++ ++ + + K ++L G I I V V F+ ++ + + + A
Sbjct: 214 PLVLSWVTALIMFRLAGGLKLSRRALLEGTILAAIGTTVLQV-FSTELLGGAGRNPILAP 272
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
A I+ L++ + +++ A +A
Sbjct: 273 FAIIIGLLIWFNFVSQVYLVSAGWSAV 299
>gi|294155749|ref|YP_003560133.1| hypothetical protein MCRO_0512 [Mycoplasma crocodyli MP145]
gi|291600279|gb|ADE19775.1| putative membrane protein [Mycoplasma crocodyli MP145]
Length = 356
Score = 68.5 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 46/273 (16%), Positives = 88/273 (32%), Gaps = 8/273 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I A F + + + S L+S P I+ +
Sbjct: 78 INRAYIKFSSREFIFIPAASSFYLLVSFVPVIIMNYLILSLFNFASVQNIFNRYFLDIIL 137
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVEMRS 127
+ I I + IS + + SS G + S N Y + +
Sbjct: 138 PKMIPGIETVISFLTTELNGTQAIISLIFLAVTCLWVSSAGYGKIIASQNYIYNHKYLGT 197
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
RL VL+ ++ L + + + ++ + + I+ + L
Sbjct: 198 NLGNRLKGLIVVLIIAILLSFTVIFTMGLDIMISGYEILNKKVDHNSTIVLFIIN--SFL 255
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L++G I + + P+ K SI G + I + +F I S ++ Y L
Sbjct: 256 FLYLGFILLFKYSPSFKLTFRSINSGALIASIPTWLLVSIFAS-IAKISDFNK-YGPLGI 313
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M +F+ M F LG +N + + ++
Sbjct: 314 FMYLSIFISMFTYFMYLGIIVNEAYFKTFISQR 346
>gi|315587260|gb|ADU41641.1| YihY family protein [Helicobacter pylori 35A]
Length = 292
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLIGAIKDFLE 91
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 92 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSISILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|126658678|ref|ZP_01729824.1| Ribonuclease BN [Cyanothece sp. CCY0110]
gi|126620115|gb|EAZ90838.1| Ribonuclease BN [Cyanothece sp. CCY0110]
Length = 139
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 1/127 (0%)
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ + + + + + + + ++ +LP K +
Sbjct: 1 MIISAALSGLNHYLSELIPGIDFLWQIINFCLSFVVISLAFGLMYRYLPDVKISWDDVKI 60
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASM 272
G I T + + +G Y+ ++ ++Y S++ LV++Y GAE
Sbjct: 61 GAIITALLFTIGKFALGLYLGR-GSFGSVYGAAGSLIIILVWVYYSAQILFFGAEFTQVY 119
Query: 273 IIYYWRK 279
Y K
Sbjct: 120 AKRYGSK 126
>gi|317011692|gb|ADU85439.1| putative ribonuclease N [Helicobacter pylori SouthAfrica7]
Length = 288
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 80/244 (32%), Gaps = 11/244 (4%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L ++ + K I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLF----VSNYMQAHSGEMEALIFPNAPKLIGAIK 87
Query: 83 LQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ + + + + S+ + R + +
Sbjct: 88 DFLENFKKTDMTLGTLEEVSIVVALVLFCENYRSIASKIFDAKPRDYVHCKGKEIFLFWG 147
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
TL + + + + + F +LL ++ YA L LF
Sbjct: 148 FGTTLAFLFALPLVVFFDIKIQIFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------N 201
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ V FT ISW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 202 KVFKHYFWVFLWVFFTSISWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLV 261
Query: 262 FILG 265
++G
Sbjct: 262 ILIG 265
>gi|308062670|gb|ADO04558.1| putative ribonuclease N [Helicobacter pylori Cuz20]
Length = 288
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 81/244 (33%), Gaps = 11/244 (4%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L ++ + K I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLF----VSNYMQAHSGEMEALIFPNAPKLIGAIK 87
Query: 83 LQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ + + + + S+ + R + +
Sbjct: 88 DFLENFKKTDMTLGTLEEVSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWG 147
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
TLV + + + + + F +LL ++ YA L LF
Sbjct: 148 FGTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPT------N 201
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 202 KVFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLV 261
Query: 262 FILG 265
++G
Sbjct: 262 ILIG 265
>gi|317010065|gb|ADU80645.1| ribonuclease N [Helicobacter pylori India7]
Length = 292
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYMQAHSGEMEALIFPNAPKLIGAIKDFLE 91
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 92 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|261838685|gb|ACX98451.1| ribonuclease N [Helicobacter pylori 51]
Length = 292
Score = 68.1 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLIGAIKDFLE 91
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 92 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|317182613|dbj|BAJ60397.1| putative ribonuclease N [Helicobacter pylori F57]
Length = 292
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLIGAIKDFLE 91
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 92 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYVHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|217032401|ref|ZP_03437895.1| hypothetical protein HPB128_164g1 [Helicobacter pylori B128]
gi|216945880|gb|EEC24498.1| hypothetical protein HPB128_164g1 [Helicobacter pylori B128]
Length = 272
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I I D +
Sbjct: 16 ELFYYASSLSFYTILSLSPILLFVFSLFVSHYMQAHSGEMEALIFPNAPKLIGA-IKDFL 74
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + S+ + R + +
Sbjct: 75 ENFKKTDMT--LGTLEEVSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 132
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F NLL ++ YA L LF
Sbjct: 133 GTTLVFLFALPLVVFFDIKIQVFFEDKDSNLLHVLRWIGTYAFFLILFTIPT------NK 186
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 187 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 246
Query: 263 ILG 265
++G
Sbjct: 247 LIG 249
>gi|261840085|gb|ACX99850.1| ribonuclease BN [Helicobacter pylori 52]
Length = 292
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLIGAIKDFLE 91
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 92 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|297380568|gb|ADI35455.1| YihY family protein [Helicobacter pylori v225d]
Length = 288
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/244 (15%), Positives = 81/244 (33%), Gaps = 11/244 (4%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L ++ + K I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLF----MSNYMQAHSGEMEALIFPNAPKLIGAIK 87
Query: 83 LQVLAVPAKGLFTISAL-AAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ + + + + S+ + R + +
Sbjct: 88 DFLENFKKTDMTLGTFEEVSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWG 147
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
TLV + + + + + F +LL ++ YA L LF
Sbjct: 148 FGTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPT------N 201
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 202 KVFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLV 261
Query: 262 FILG 265
++G
Sbjct: 262 ILIG 265
>gi|157738067|ref|YP_001490751.1| tRNA-processing ribonuclease BN [Arcobacter butzleri RM4018]
gi|157699921|gb|ABV68081.1| tRNA-processing ribonuclease BN [Arcobacter butzleri RM4018]
Length = 261
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 91/272 (33%), Gaps = 22/272 (8%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAH-QFVPTVIDVV 66
+ A++ F +D A+ +S + S+ P I + ++ T +
Sbjct: 10 LLKKFILAVDSFFNDDTTYYAASLSFFTIFSILPIIALAIAIISNFPEFHAYMNTFTIYL 69
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
F +K I + + ++ K L + + + + +N+ + +
Sbjct: 70 FNFINPTHSKDIIEALENYISNSNK-LGFLGIIYMIFVFVMFFKDYDYIVNKIHETIRRP 128
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
+ S +++ +++ + L R +
Sbjct: 129 VILSFFIYSLFFIIFPLFFVILTFVLSFLENDFL--------------------RNSISF 168
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ + + K + L FT + LF +Y++ TY+T+Y LA
Sbjct: 169 IFTWFIFFSLFKLSANKKIANYAALISSFFTLAVLSISKNLFIYYVIYNKTYTTIYGSLA 228
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+++ ++Y+ + ++ G ++ + + +
Sbjct: 229 TLLFTFFWIYVSWIIYLYGIKMCHKLDLKMKK 260
>gi|217034542|ref|ZP_03439952.1| hypothetical protein HP9810_897g27 [Helicobacter pylori 98-10]
gi|216943023|gb|EEC22504.1| hypothetical protein HP9810_897g27 [Helicobacter pylori 98-10]
Length = 276
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 16 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLIGAIKDFLE 75
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 76 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGF 132
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 133 GTTLVFLFALPLVVFFDIKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NK 186
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 187 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 246
Query: 263 ILG 265
++G
Sbjct: 247 LIG 249
>gi|317181090|dbj|BAJ58876.1| putative ribonuclease N [Helicobacter pylori F32]
Length = 293
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 33 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLIGAIKDFLE 92
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 93 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYAHFKGREIFLFWGF 149
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 150 GTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPT------NK 203
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 204 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 263
Query: 263 ILG 265
++G
Sbjct: 264 LIG 266
>gi|313678180|ref|YP_004055920.1| membrane protein [Mycoplasma bovis PG45]
gi|312950400|gb|ADR24995.1| putative membrane protein [Mycoplasma bovis PG45]
Length = 344
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 45/279 (16%), Positives = 103/279 (36%), Gaps = 7/279 (2%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R+ + +++ + F D + + +L+S P I+ + +
Sbjct: 60 LRKNKNKLGELVGRVYKRFTSRDFVFIPVSFAFYSLVSFIPIILSVSVALSLIPGEFSTL 119
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+++ P + + Q L LA+ + SS+G S+N Y
Sbjct: 120 FNNEILKRIIPG--LDSFINSVPQTWNAKTFVLVITLFLASLFISSSGFGKFTYSINYIY 177
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ +++ RL F V+ ++ + I + ++++I + I+++
Sbjct: 178 KHETTGNYFFNRLKGFFIVIGIALFIFISALIYLSIYKLFGVHKASELDKNIYFYIVFSL 237
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
ML L++GL + P S+LPGV+ + +V +F + Y
Sbjct: 238 ---YLMLNLYVGLSVLFKISPGFIVPWSSLLPGVLIASLPTMVFITIFGYLTSLIDYYK- 293
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ M + + ++ F LG NA+ ++ +
Sbjct: 294 -FGIFGIFMYIALLVSIMSYFMYLGIITNAAFYKTFYSR 331
>gi|317179585|dbj|BAJ57373.1| putative ribonuclease N [Helicobacter pylori F30]
Length = 292
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLIGAIKDFLE 91
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 92 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYVHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F +LL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKNSSLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|226304761|ref|YP_002764719.1| hypothetical protein RER_12720 [Rhodococcus erythropolis PR4]
gi|229492375|ref|ZP_04386182.1| ribonuclease BN [Rhodococcus erythropolis SK121]
gi|226183876|dbj|BAH31980.1| hypothetical protein RER_12720 [Rhodococcus erythropolis PR4]
gi|229320784|gb|EEN86598.1| ribonuclease BN [Rhodococcus erythropolis SK121]
Length = 325
Score = 67.4 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/260 (16%), Positives = 91/260 (35%), Gaps = 17/260 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F+++ G +A+ I+ +S+FP ++ + + GF+ G + ++D +P
Sbjct: 23 VLYKFLDDQGVYLAALIAYYGFVSLFPLLLLLSTILGFVLSGNPELQQQILDSALHQFPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + + A + ++N + V R
Sbjct: 83 IGDDLGNAQQIGGGVTGLVIGIVGGLYGGLGVAL----ACQNAMNTVWSVPRNMRPDPIR 138
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
G +LL ++ L I+ V+ ++ F L L +++ N I+ L
Sbjct: 139 GRLQGLLLLGTIGLAILGTTAVSNIGGALHLGGSFSFLLTLAVVVLNAGIFIVAFRLTCA 198
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS-TYSTMYAGLASIMTC 251
+ + PG I + W Y+ + ST A ++
Sbjct: 199 ----------RPLSVADVAPGAIAAAVLWQALQSFGALYVTSVVRGASTTNGVFAIVLGL 248
Query: 252 LVFLYMLGVFFILGAELNAS 271
L FL++ ++ AE+N
Sbjct: 249 LAFLFLAAASIVMCAEINVV 268
>gi|163782522|ref|ZP_02177519.1| hypothetical protein HG1285_16600 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882095|gb|EDP75602.1| hypothetical protein HG1285_16600 [Hydrogenivirga sp. 128-5-R1-1]
Length = 265
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/277 (14%), Positives = 88/277 (31%), Gaps = 15/277 (5%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTV 62
F ++ + + + ++ LLS+ P + NL L + +
Sbjct: 2 NLFRAFLQGAVLSLFDLLRNNYTYHSGALTYHFLLSMAPLTIVLLNLVSLLPMVEL-SEI 60
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ +P+ + + + + L + + +
Sbjct: 61 ERTLDRFFPQYTNRVVQEILEVQKRSGQTSLIALGISYFFSVGFIKYMGRAFAFVSEGEL 120
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E R Y L V L+ V L Y++ P +LLL +
Sbjct: 121 GEKRE--------LFYWLFMPVFLLGTVLVISLSFLLSIYIKLVIPTGYSLLLDLSYVLP 172
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
A ML+L ++ + + + + + + FT YI S +Y
Sbjct: 173 GALMLSL------IYRSFLKRGIGVTRLFLLSTYISLLMFLSQLAFTWYIAHLFKGSLLY 226
Query: 243 AGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L++I+ L+++ ++ + + GA L + + K
Sbjct: 227 GSLSTIVVSLLWINLIFLILLYGARLIHRLREFEDAK 263
>gi|331699721|ref|YP_004335960.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326954410|gb|AEA28107.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 359
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 72/264 (27%), Gaps = 22/264 (8%)
Query: 17 EHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAK 76
VE D A ++ A + + P + +L + + DV A
Sbjct: 92 RRIVEVDLANQALILAALAFMLLVPAL---VSLQAVIPLGATGGGLTDVARRLGLTDQAT 148
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
+ A+ + + AL+ ++
Sbjct: 149 SDLQTLFPGREAVRGATTIFGAVLTLVSAFSWPAALQRGYEL----------------AW 192
Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
G L + + P + + I I + + +
Sbjct: 193 GLPSAGWRALWRPLLWLGTFAVFGSLWGLSGPLVTGWVRAIVPIIIGLPIAIGWA--WWT 250
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVFL 255
L + +LPG I I + + + Y+ + ++ Y L + L +L
Sbjct: 251 QHLLLGGRIGWRPLLPGAIAIGIGLLGLRIAASLYLSRSIVSHHREYGPLGIVFVLLSWL 310
Query: 256 YMLGVFFILGAELNASMIIYYWRK 279
GV + GA L + + R+
Sbjct: 311 VAFGVVMLGGALLGVFLREHRQRR 334
>gi|315656372|ref|ZP_07909261.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
gi|315492931|gb|EFU82533.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii subsp. holmesii ATCC 35242]
Length = 390
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/260 (13%), Positives = 82/260 (31%), Gaps = 10/260 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPF--IVFGANLAGFLGAHQFVPTVIDVVFGA 69
A + +A IS +AL S+ ++ T+ V
Sbjct: 34 FMRAYLRYQNASANLLAGGISYTALFSMAGIVTLIIMTAQVMIFAFPLTSDTIFRDVNQW 93
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF---SSNGVEALRISLNRAYRVVEMR 126
P I ++ A+ + + + V ALR+S+ + + +
Sbjct: 94 IPGAIQVDGQPGLIDPAAIASPSFTWGTLVVLVVSIMAGIRVVAALRVSIQTVFGLPQRP 153
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYA 184
+ + L L+ + ++ S + + + +++ P L +I G
Sbjct: 154 GAGWKNTLRDVCMFLVLFLGGILASVLGTGSVVVVQTLQRRLPLALPAPSELINAGAFLL 213
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
T + + L F +L ++ + G + + + YA
Sbjct: 214 TGVLTTLILAFTLRYLALVRAPRRDLWIGTGTLGFLSTALQMSGVYLAASVP---PAYAP 270
Query: 245 LASIMTCLVFLYMLGVFFIL 264
I+T ++++ +L F+
Sbjct: 271 FTLILTIVLWVNVLCRLFLY 290
>gi|325295450|ref|YP_004281964.1| ribonuclease BN [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325065898|gb|ADY73905.1| ribonuclease BN [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 269
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 51/260 (19%), Positives = 96/260 (36%), Gaps = 16/260 (6%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
I ++ VE D A+ I+ L+S+ P +F FLG F +
Sbjct: 10 RSFLRYILYSLCDAVERDYPFYAASIAYYTLVSIIPLFIFLF----FLGMTVFQIDFESL 65
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + KPI +I QV+ + + +A+ +FS +L S V +
Sbjct: 66 IPKEFFNSPLKPIFLQIEQVM-NKSGLISGTAAIVMLWFSRGIFLSLEKSFCEILEVENL 124
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
++ L + L + + + I L + I+
Sbjct: 125 AGFFYRNLAVILAIFLLWIFMFVFYLAKYLIAALLPQI-----------PILSILSSLLV 173
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ LF LI ++ FL K + I F ++ V +F +I S S +Y+
Sbjct: 174 PILLFAILISMYYFLLPIKIRFNFIFKISTFVFLLLTVFEKIFIWFIFNVSKVSILYSSF 233
Query: 246 ASIMTCLVFLYMLGVFFILG 265
A+I+ L+++Y + ++G
Sbjct: 234 AAIIIFLLWIYYSAIVILIG 253
>gi|332674167|gb|AEE70984.1| YihY family protein [Helicobacter pylori 83]
Length = 288
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/243 (16%), Positives = 83/243 (34%), Gaps = 9/243 (3%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L + ++F P++I
Sbjct: 32 ELFYYASSLSFYTILSLSPILLFVFSLFVSSYMQAHSGEMEALIFPNAPKLIGAIKDFLE 91
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
A G + + S+ + R + +
Sbjct: 92 NFKKTDIALGTLEE---VSILVALVLFCENYRSIASKIFQAKPRDYVHFKGKEIFLFWGF 148
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
TLV + + + + + F NLL ++ YA L LF
Sbjct: 149 GTTLVFLFALPLVVFFDIKIQVFFEDKNSNLLHVLRWIGTYAFFLILFTIPT------NK 202
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ V FT +SW V FT+Y++ TY +Y ++ + + ++Y+ +
Sbjct: 203 VFKHYFWVFLWVFFTSVSWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVI 262
Query: 263 ILG 265
++G
Sbjct: 263 LIG 265
>gi|74317588|ref|YP_315328.1| cyclic nucleotide-binding domain-containing protein [Thiobacillus
denitrificans ATCC 25259]
gi|74057083|gb|AAZ97523.1| Cyclic nucleotide-binding domain (cNMP-BD) protein [Thiobacillus
denitrificans ATCC 25259]
Length = 424
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/266 (13%), Positives = 81/266 (30%), Gaps = 5/266 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
R + + Y F + A+ + LLS P ++ + LG
Sbjct: 10 RGPLSRIVQLGYTTARLFTQNGLQNHAAATAFYFLLSATPLLLLLSYGLTLLGQIAENSV 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR 121
++ A E + E+ + + ++ + S V ++ + +
Sbjct: 70 PATILLAALYEQMRLDSLTELGFIPSQTELTAGSVGLVTLLLSSRGLVNTMQGAFRIIFP 129
Query: 122 VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR 181
E RS+ + S+ L+ L + V + L ++ + ++
Sbjct: 130 AREKRSF----VGSWILPLVVLPLLFALMGVAALAQVTLTFLGQNDFIGTGNARVLQVLN 185
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM 241
++ L + LP + S + VLF + Y ++
Sbjct: 186 SLFGFAMVWALLFTAYWRLPRRHPPARVAAVFALGAIASLGLLLVLFGAFFE-LENYLSL 244
Query: 242 YAGLASIMTCLVFLYMLGVFFILGAE 267
Y L ++ L+ Y + A+
Sbjct: 245 YGALGGVVFVLIGAYFAFLLLYFWAQ 270
>gi|269114820|ref|YP_003302583.1| hypothetical protein MHO_0460 [Mycoplasma hominis]
gi|268322445|emb|CAX37180.1| Conserved hypothetical protein, putativeribonuclease [Mycoplasma
hominis ATCC 23114]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 44/281 (15%), Positives = 94/281 (33%), Gaps = 17/281 (6%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+I+ A E + + + ++ LS P + + G + ++ + +V+ G
Sbjct: 72 EIVNSAYEKINSNEFSFVPAGYAMYLFLSFIPISILMLGIIGSV-DEKYEVVLKNVILGQ 130
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I++ I + + AL+ +S G S++ Y +
Sbjct: 131 IIPGISEVIPSFSTLWGSTGNAIALILFALSVLILASKGYSKFIFSIDALYEHKSPFRVW 190
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLAL--------------AYVRKFFPALGNLLL 175
+R+ F + + L ++ A + L F L
Sbjct: 191 KSRIKGFIVSVFVCLILSLILLGLTAFMVFLIDKVGLGKFDADIKKMKLADFNLTTEFYL 250
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
I W I + ++G +F ++ P K K+ PG + I + ++F
Sbjct: 251 IYWFTTILFLPVFTYLGFLFYFVYAPNFKLKMSQAHPGALIAAIPTAIFILIFGSLTSLI 310
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ +AS M ++ L F +G +N+S +
Sbjct: 311 P--YKKFGIVASFMYIILLLSFTSYFIYMGIIVNSSFYKTF 349
>gi|238809684|dbj|BAH69474.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 356
Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/267 (17%), Positives = 96/267 (35%), Gaps = 9/267 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
++I + F ++ + + L+S P I L + + + I+ V
Sbjct: 83 ELINRTYKKFTDKSFVFIPLSTAFYFLVSFVPIITIMIVLLSLIPGYHTL--FINEVLTR 140
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ I L I LA+ + +S+G S N Y + +W+
Sbjct: 141 IIPGVTSIIKIPDTTKKGAQLTSL-IILCLASLWMASSGFGKFIYSQNYIYGHENLGNWF 199
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
R+ VL S+ L + + +++ Y + + + ++ L
Sbjct: 200 TNRIKGLFVVLGISIYLFLAAALYLFFYQTFTYNMSTYHKNIYF----YITFSFYLLIML 255
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ GL ++ P+ K ++ PGV+ T ++ +F + + Y Y + S M
Sbjct: 256 YFGLTLLYTMSPSFKLSWTTVFPGVLITSFPVMIFITIFGF-LTSLINYDK-YGIIGSFM 313
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYY 276
+F+ L F LG +N + Y
Sbjct: 314 YIALFVSFLTYFMFLGIIVNEAYYKTY 340
>gi|304390852|ref|ZP_07372804.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
gi|304325735|gb|EFL92981.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii subsp. curtisii ATCC 35241]
Length = 368
Score = 65.8 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/266 (13%), Positives = 84/266 (31%), Gaps = 10/266 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPF--IVFGANLAGFLGAHQFVPTVIDVVFGA 69
A + +A IS +AL S+ ++ T+ V
Sbjct: 13 FMRAYLRYQNASANLLAGGISYTALFSMAGIVTLIIMTAQVMIFAFPLTSDTIFRDVNQW 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF---SSNGVEALRISLNRAYRVVEMR 126
P I ++ A+ + + + V ALR+S+ + + +
Sbjct: 73 IPGAIQVDGQPGLIDPAAIASPSFTWGTLVVLVVSIMAGIRVVAALRVSIQTVFGLPQRP 132
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYA 184
+ + L L+ + ++ S + + + +++ P L +I G
Sbjct: 133 GAGWKNTLRDVCMFLVLFLGGILASVLGTGSVVVVQTLQRRLPLALPAPSELINAGAFLL 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
T + + L F +L ++ + G + + + YA
Sbjct: 193 TGVLTTLILAFTLRYLALVRAPRRDLWIGTGTLGFLSTALQMSGVYLAASVP---PAYAP 249
Query: 245 LASIMTCLVFLYMLGVFFILGAELNA 270
I+T ++++ +L F+ + A
Sbjct: 250 FTLILTIVLWVNVLCRLFLYMSCWIA 275
>gi|269955786|ref|YP_003325575.1| ribonuclease BN [Xylanimonas cellulosilytica DSM 15894]
gi|269304467|gb|ACZ30017.1| ribonuclease BN [Xylanimonas cellulosilytica DSM 15894]
Length = 288
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/257 (14%), Positives = 92/257 (35%), Gaps = 6/257 (2%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVVFGAWP 71
+ + + + I+ +AL S+F + G ++ V++ V P
Sbjct: 15 RTVAWYGARNAALLCGGIAYAALFSLFAGLTIGWSVFSASLGRNDDLRDAVLEQVDTWMP 74
Query: 72 EVIAKPITDEILQ---VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM-RS 127
++ + D I VL ++A+ + + + ALR S+ + + ++
Sbjct: 75 GLVGEGPDDLINPDQLVLPSAWTWASVVAAVVLLFSALRVMAALRSSVRSMFDLPATGQN 134
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ R+ L V ++ + VA V + + + G ++
Sbjct: 135 LVLVRVWQLAGFALLGVAVLASAGASVAAGAVGQVVESWLGGSELVAWAVRLGAAVVGIV 194
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
++ + + A+ + ++ G + L T +V + + + A A+
Sbjct: 195 LDAAVVVMIVTVVAGARPRRRDLIWGSLAAGAVAGALRWLGTTIVVGSAGANRLLAPFAA 254
Query: 248 IMTCLVFLYMLGVFFIL 264
I+T LV + ++ +L
Sbjct: 255 IITILVLINVVARILLL 271
>gi|149275944|ref|ZP_01882089.1| probable ribonuclease [Pedobacter sp. BAL39]
gi|149233372|gb|EDM38746.1| probable ribonuclease [Pedobacter sp. BAL39]
Length = 306
Score = 65.8 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 94/266 (35%), Gaps = 6/266 (2%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFV-PTVI 63
+ F A + F D +A + A ++ P ++ L G+ + + +
Sbjct: 9 IKLFFIRFGAAFKLFQHNDPLRLAGATAFFANFAIPPILIILIRLFGYFVDRKLLANRLF 68
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKG-LFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ + + I ++ + AV + +S + + ++ ++ S+++ + +
Sbjct: 69 ERLADLLDDSSTSQIRQTLMNIRAVDHQWYATLLSFVFFIFVATTLFNVIKNSMDQIWSI 128
Query: 123 VEMRS---WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
+ ++ +L + ++++ ++ + A + A +
Sbjct: 129 AKKPHQGFFFTLKLRARSFIIILLAGILFFVGLLTDSVQAFIGIYLNNAAPTFGKFFLSI 188
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ + I + FL + S + G IFT I + +G + + +
Sbjct: 189 LNQLLFVAIVTIWFTILFRFLTNGRPTWASAIHGGIFTGILFTIGKFILRIMLPMSGIGN 248
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILG 265
+Y SI+ ++F++ F G
Sbjct: 249 -IYGTSGSIVLIMLFVFYSSFIFYFG 273
>gi|309803176|ref|ZP_07697273.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
gi|308164684|gb|EFO66934.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
Length = 149
Score = 65.4 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 50/126 (39%)
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ + ++ L + + R +L + I+++ +P K
Sbjct: 1 MVAFGNQIMNFLGVTLNFSVEWLNQLLHYRWPLIILMTILFNIYINYTIPNISMKSRITF 60
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
PG IFT I W + F Y+ F Y + + + L++L + + F++G LNA+
Sbjct: 61 PGTIFTTICWCGLSYFFGLYLHEFGIRWENYGIIGTFIIFLMWLNLAAILFLIGVCLNAT 120
Query: 272 MIIYYW 277
+ +
Sbjct: 121 ISYIKY 126
>gi|322379028|ref|ZP_08053431.1| putative ribonuclease N [Helicobacter suis HS1]
gi|322380794|ref|ZP_08054900.1| ribonuclease N [Helicobacter suis HS5]
gi|321146798|gb|EFX41592.1| ribonuclease N [Helicobacter suis HS5]
gi|321148520|gb|EFX43017.1| putative ribonuclease N [Helicobacter suis HS1]
Length = 275
Score = 65.4 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/242 (15%), Positives = 83/242 (34%), Gaps = 14/242 (5%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+ AS +S +LS+ P ++F A + F+ V ++F P+ I +
Sbjct: 25 LFYYASSLSFYTILSLSPILLFIALV--FVSPFSQAFEVEKLLFPDSPDFIKVTRSFFKS 82
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ A G+ IS +A A+F + E R ++ +
Sbjct: 83 FMQNNRALGIVEISFIALAFF---LFCENYRYIASKIFNAEPRDYFTFKGKRIFVFWGFG 139
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+V M + + L + L + + + + + F
Sbjct: 140 TGIVFMLVLPCILIYDLKMQDLTQGWQLSFLHWLGSYVFFVLLFLIPTNKTF-------- 191
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
++ L T I W + F +Y++ TY +Y ++ + + ++Y+ + +
Sbjct: 192 -KRLSWSLVWSFITSICWNLMKWGFVYYVLYNRTYHELYGSISILWFLMSYIYVSWLLLL 250
Query: 264 LG 265
G
Sbjct: 251 FG 252
>gi|193216445|ref|YP_001999687.1| ribonuclease BN-like family enzyme [Mycoplasma arthritidis 158L3-1]
gi|193001768|gb|ACF06983.1| ribonuclease BN-like family enzyme [Mycoplasma arthritidis 158L3-1]
Length = 371
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/284 (15%), Positives = 96/284 (33%), Gaps = 20/284 (7%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+I+ A + + + + ++ LS P ++ G + + ++ + + G
Sbjct: 76 EIVNSAYKKINSNEFAFIPAGYAMYLFLSFIPIACLLLSVIGPI-SPEYNAILKLAILGR 134
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ K + D + + AL+ + SS G S++ Y + +
Sbjct: 135 IIPGVEKVLPDMASIWNSAGGAITLILFALSVIWLSSKGYAKFVHSIDALYEHKSPQRAW 194
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLAL-----------------AYVRKFFPALGN 172
R+ +L + L I+ F A L
Sbjct: 195 KNRIKGVFLGVLIAFGLTILLLAFTAFMSFLAKESAFGDLSPATLSKENLTLADLKLRWE 254
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
L+ + I + ++G + P K KI + PG + T I V ++F +
Sbjct: 255 FWLVYYFSIIITLPIVTYLGFLIFFKLAPNFKIKIAHVHPGALITAIPTSVFILIFGS-L 313
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
+ Y + +A+ M ++ + + F +G +NA+ +
Sbjct: 314 TSIIPYGK-FGPVAAFMYLILLMVFMSYFIYVGVIVNATFYKTF 356
>gi|15828673|ref|NP_326033.1| hypothetical protein MYPU_2020 [Mycoplasma pulmonis UAB CTIP]
gi|14089615|emb|CAC13375.1| unknown; predicted coding region [Mycoplasma pulmonis]
Length = 352
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/268 (15%), Positives = 97/268 (36%), Gaps = 6/268 (2%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ E + + + LLS P I L + +Q V V +++
Sbjct: 80 ELVKRTYEKISSSEFSFIPPSTAFFILLSFIPIISLVLILLSTISDYQKV-FVDEILKKF 138
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P + + + + L+ + + SS+G S++ Y + +
Sbjct: 139 IPGLSDFISSFQKNKELSSLENTGIWFLVASLIWISSSGYARFVYSISYIYGHKNLGNVI 198
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ V+ ++ + + +++ + +++K L + +
Sbjct: 199 SNKIKGIFIVIAMALYITLALLIYIP---FINFLKKNLDDDSLYLTFFYISATIYVVFFY 255
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
+ G+I F+P + K I PGV + + + V F + + S+Y + Y L + +
Sbjct: 256 YFGMILFFKFVPKFRLKWKHINPGVWISVLPISLFTVSFGF-LASLSSYGS-YGILGTFI 313
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYW 277
F +L F +G N + Y+
Sbjct: 314 YISFFTLILTYFMYVGVMANEAYYKTYF 341
>gi|169351596|ref|ZP_02868534.1| hypothetical protein CLOSPI_02376 [Clostridium spiroforme DSM 1552]
gi|169291818|gb|EDS73951.1| hypothetical protein CLOSPI_02376 [Clostridium spiroforme DSM 1552]
Length = 266
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/270 (14%), Positives = 101/270 (37%), Gaps = 15/270 (5%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M++ ++ I I ++ + + ++ ++S+ P A L+ +
Sbjct: 7 MKKVINNIYIQINYKISNYRRKVSKNASISLAYYLIMSIVPICSLCAFLSSLFNID--LS 64
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ ++ + +T + + + + + Y S G+ + +
Sbjct: 65 NLEVLLTEYLTPEFSNIVTSSLTAKHISISSMV---VLIISLYVVSKGINQMYEISKTLF 121
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
R++ + R+I+ L+ + L++++ + IP+ +++ L I+
Sbjct: 122 NYTSNRNFIVERMITVFKTLIVLILLMLITSLLAFIPIINSFIN---------LSNIFIF 172
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
L LFI L ++ +P K + + G I ++ + +Y S Y+T
Sbjct: 173 DNTYLFLVLFILLSLIYKIIPGVKVAWIDTMKGTAIASILLLLLILGLKYYFS-ISDYTT 231
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNA 270
+Y LAS + ++ + +G + A
Sbjct: 232 VYGPLASFVVIMITFMFVSEIIYIGMYVVA 261
>gi|213417075|ref|ZP_03350219.1| hypothetical protein Salmonentericaenterica_03642 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 231
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/224 (12%), Positives = 72/224 (32%), Gaps = 9/224 (4%)
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + + + + A Y N + LR ++ R V
Sbjct: 4 ILMNVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWE 63
Query: 126 R------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLII 177
R ++ L F ++ + L+I + A + + ++ L
Sbjct: 64 RKPQDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAW 123
Query: 178 WNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST 237
+ ++ A ++ ++ LP + + +++ G I + V ++ T+ + +
Sbjct: 124 HLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK 183
Query: 238 YSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
S A S++ + F Y + A A+ + P
Sbjct: 184 -SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 226
>gi|256394424|ref|YP_003115988.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256360650|gb|ACU74147.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 316
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 75/268 (27%), Gaps = 13/268 (4%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVVFGAWPE 72
++ + ++ A +S+FP ++ + G V+ +P
Sbjct: 30 VWRKLSDDQAGNLTGLLTFYAFVSLFPLLLLLVTVLGIALRHDPALQDWVLRSALADFP- 88
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
V+ + + + I + + + A + LNR + V R
Sbjct: 89 VLGDQLRGNVHALGRGATG--LVIGLVGSLLGARGLANAAQNVLNRLWAVPYNRRPGFPW 146
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
I L F G L + + + ++ +
Sbjct: 147 S-------WLRSYAFIAVVGIGMAATTLVADLSFGIGSGPLSIAVRVAALSGAVVIGTLA 199
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTC 251
A + + G + + W + +YI ST+Y ++
Sbjct: 200 YWLALRLAIAGEVAGRDLWTGAVIGAVGWQFLQGIGGYYITHQLRHASTLYGTFGLVLGL 259
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +LY+ + E++ W +
Sbjct: 260 IAWLYLQARVTLYAVEVDVVRSHKLWPR 287
>gi|284165650|ref|YP_003403929.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
gi|284015305|gb|ADB61256.1| ribonuclease BN [Haloterrigena turkmenica DSM 5511]
Length = 261
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/236 (14%), Positives = 73/236 (30%), Gaps = 20/236 (8%)
Query: 39 VFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA 98
P ++ L G + V + + + + A +
Sbjct: 38 FIPLLMLLFALVG----ERLVTRIHGTTPEFLTPGAQRLVYEA--TTTATGRTWAVLFAI 91
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
A+ S+N + R RV E L + V ++ + + +
Sbjct: 92 GVLAWSSANVAVGFLAVVERIERVPERP-------------LGSQVRDAVVVLGSIGLAI 138
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
L + +LAL + + ++ + + + LPG + T
Sbjct: 139 VAIVGTSALFPLPPDGPVAGLSGFVVLVLALTVAFLPMYYVPSRSATTPSAALPGALVTA 198
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
W + +Y Y +Y L+ ++ L LY+ V ++G +NA++
Sbjct: 199 FGWTLVHTGVHYYAANAGRY-AIYGVLSGVIIILTSLYLAAVLLMVGIVVNATLEA 253
>gi|145593357|ref|YP_001157654.1| ribonuclease BN [Salinispora tropica CNB-440]
gi|145302694|gb|ABP53276.1| ribonuclease BN [Salinispora tropica CNB-440]
Length = 367
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/251 (15%), Positives = 85/251 (33%), Gaps = 16/251 (6%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFV 59
R F + D A+ + G +A+ I+ +VF + ++ G + G +
Sbjct: 56 RRRFPAL-DHGLRAVLLYNHRFGSRLAAAIAYYGFFAVFALALVAYSVFGAILEGNAEVN 114
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
D + P + + + + + + + VEA+R S
Sbjct: 115 AAAADFLRENLPFLDPVKVAE--------SSGAVGVVGLTILVFTGVGWVEAIRSSQRLL 166
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
Y + + + R + VLL L+ +S V +L L I
Sbjct: 167 YGLDQQPGNLVVRRLVDLGVLLVVFVLLGVSVAAVDTLESLLRWLLGSAGSAGLTTISAV 226
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ + + L+ V P+ + ++ P V+ + + + HY+V + +
Sbjct: 227 LSVFVNAVLATLLLVAVPRLRPS-RVRLR---PAVLLVAVGITLLNTIGRHYVVR-TERN 281
Query: 240 TMYAGLASIMT 250
Y +A +
Sbjct: 282 PAYTVVAGAVG 292
>gi|189439006|ref|YP_001954087.1| hypothetical protein BLD_0143 [Bifidobacterium longum DJO10A]
gi|189427441|gb|ACD97589.1| Hypothetical membrane protein [Bifidobacterium longum DJO10A]
Length = 266
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 97/262 (37%), Gaps = 6/262 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPE 72
++ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 1 MLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIPG 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYIT 131
V +T L ++ + + + + +LR ++ + + + +
Sbjct: 61 VADSFLTSSALGTMSSALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVVA 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLAL 189
RL + ++ ++ + + + ++ + L ++ + T +AL
Sbjct: 121 RLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVAL 180
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L + L + + + G + ++ +L + ++ + M A A+++
Sbjct: 181 NFALFMLLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGARLLAG-ASRNPMLAPFAALI 239
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L++ ++ +L A L A
Sbjct: 240 GVLIWFNLVAQVILLCAALIAE 261
>gi|331699972|ref|YP_004336211.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326954661|gb|AEA28358.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 301
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/271 (14%), Positives = 91/271 (33%), Gaps = 7/271 (2%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVI 63
D + + + G +AS ++ + +++ P ++ + AGFL + V +
Sbjct: 23 WPALDHLRRTGRRYFAQRGNHLASAVAFTTVVAAVPLLMVLFSAAGFLLWLRPELVADLE 82
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
V G +P +A + + + + +I +AA + V LR +L + +
Sbjct: 83 SWVLGGFPAPVAAAVGPVVESAV-TSRAPVASIGTVAAVWAGKTWVTVLREALAAMWEMP 141
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN---LLLIIWNG 180
+ R++ LLA + V S + L + ++
Sbjct: 142 PRPPASVRRVLRDLLSLLALIIAVSTSMALMVSATGGLGAVLRLVGLADHAAAYALVSGV 201
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ + L+++ LP + ++ P + V+ T I +
Sbjct: 202 GVVLGWAIGWGVLVWLLGRLPGHTLPLRTVAPVAAIGALLIEALTVVTTLTIGATAGSVG 261
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
++ L FL+ + A A+
Sbjct: 262 G-VVFGGLLAGLAFLFAGARIVLSLAAWLAT 291
>gi|262367622|gb|ACY64179.1| ribonuclease BN-like family protein [Yersinia pestis D182038]
Length = 185
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 38/112 (33%), Gaps = 2/112 (1%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
I A + F + G + I+ + LS+ P ++ + GF+ + +I+ +
Sbjct: 50 HIIRATDRFNDRLGSQFGAAITYFSFLSLIPILMVSFVMVGFVLASNPDLLAELINKIVN 109
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ + + + A Y + + LR ++ +
Sbjct: 110 SISDPALATTLKNTVNTAIQQRTTVGLTGLAIALYSGISWIGNLREAIRAHH 161
>gi|77414094|ref|ZP_00790262.1| putative ribonuclease BN [Streptococcus agalactiae 515]
gi|77159846|gb|EAO70989.1| putative ribonuclease BN [Streptococcus agalactiae 515]
Length = 196
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 3/177 (1%)
Query: 106 SNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK 165
S + +L+ ++N+AY V + R + I+RL+ G L+ L + L +
Sbjct: 1 SKSLTSLQKAINKAYGVDQHRDFVISRLVGVGTGLIILFLLTFVLIFSTFSKPVLQIIVN 60
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVG 224
+ L + N T L +F+G+ ++ LP A+ + + ++PG +F+
Sbjct: 61 MYDLGDTLTAWLLNLAQPVTFLTIFLGIGILYFILPNARIRKVRYVIPGTLFSTFVIGFF 120
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L + Y++ S++ +++ L ILGA LNAS+ K
Sbjct: 121 SNLISQYVLNRVEKMVDIKTFGSVVIFILMLWFIFLAHIMILGAILNASVQEIATGK 177
>gi|239906323|ref|YP_002953064.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
gi|239796189|dbj|BAH75178.1| hypothetical membrane protein [Desulfovibrio magneticus RS-1]
Length = 309
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 62/229 (27%), Gaps = 6/229 (2%)
Query: 38 SVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS 97
S P + L G + + + A + + L + G S
Sbjct: 48 SSVPLLFAMLALCGAVSGEDWTGQMALRRQLAILTPYIDELLVSRARRLLWASPGFSLES 107
Query: 98 ALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
A+ + S + A R +L R L S ++ V
Sbjct: 108 AVFVLWSSWLFLGAFRRALRRPLGEAAPEQRPP------LAARLMSTAWGAIAGVLFLGA 161
Query: 158 LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
L A + P L + +L L +L + + +I
Sbjct: 162 LTAALYLAYLPRLEPRGSLARQWSAAWGVLCLTGMFAAAYLLFLPGRRPLRAIAGVSALL 221
Query: 218 WISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
++ F ++ Y +Y L + L++L + GA
Sbjct: 222 AVAAWAVTAAFGQFVAHGGRYELVYGSLGGAVLFLLWLQYNACLVLWGA 270
>gi|322691509|ref|YP_004221079.1| hypothetical protein BLLJ_1320 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320456365|dbj|BAJ66987.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
Length = 266
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/262 (12%), Positives = 97/262 (37%), Gaps = 6/262 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPE 72
++ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 1 MLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIPG 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV-EMRSWYIT 131
V +T L ++ + + + + +LR ++ + + + +
Sbjct: 61 VADSFLTSSALGAMSSALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVVA 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLAL 189
RL + ++ ++ + + + ++ + L ++ + T +AL
Sbjct: 121 RLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVAL 180
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L + L + + + G + ++ +L + ++ + M A A+++
Sbjct: 181 NFALFMLLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGARLLAG-ASRNPMLAPFAALI 239
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L++ ++ +L A L A
Sbjct: 240 GVLIWFNLVAQVILLCAALIAE 261
>gi|312132446|ref|YP_003999785.1| membrane protein [Bifidobacterium longum subsp. longum BBMN68]
gi|311773109|gb|ADQ02597.1| Hypothetical Membrane protein [Bifidobacterium longum subsp. longum
BBMN68]
Length = 266
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/262 (14%), Positives = 95/262 (36%), Gaps = 6/262 (2%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF--LGAHQFVPTVIDVVFGAWPE 72
++ +V G +A+ ++ L + F + ++ G +G + +ID V P
Sbjct: 1 MLDRYVSRSGPLLANGLAYGLLFAFFAGVWIAVSVFGLIMVGNIDWQQMLIDAVREVIPG 60
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
V +T L ++ + + + + +LR ++ + +
Sbjct: 61 VADSFLTSSALGTMSSALTWTGLATLAIFWWTVTGWMNSLRHAVRAMFDDCGDELNIVVA 120
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNGRIYATMLAL 189
+ +A L I+S V + + + + + L ++ + T +AL
Sbjct: 121 RLRDTLAAIAIAILFILSTVAGTVSGGIVRRLLQWGGIPSSSLPGTVLLEMTGFGTGVAL 180
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
L + L + + + G + ++ +L + ++ + M A A+++
Sbjct: 181 NFALFILLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGARLLAG-ASRNPMLAPFAALI 239
Query: 250 TCLVFLYMLGVFFILGAELNAS 271
L++ ++ +L A L A
Sbjct: 240 GVLIWFNLVAQVILLCAALIAE 261
>gi|319938186|ref|ZP_08012584.1| hypothetical protein HMPREF9488_03420 [Coprobacillus sp. 29_1]
gi|319806707|gb|EFW03356.1| hypothetical protein HMPREF9488_03420 [Coprobacillus sp. 29_1]
Length = 267
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/275 (13%), Positives = 89/275 (32%), Gaps = 15/275 (5%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+D + + + A+ +S LL + P A L + + ++
Sbjct: 2 KHFYDKCVEIYDDYRAVVPSYAAAALSFYLLLIIVPAFSLVAVGTSLLNID--MSLIENI 59
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ + I D + + + ++ + + Y S GV + Y+
Sbjct: 60 IQQIVMPEYSAMIIDVLE---SRSVNTVALVTMIISIYTVSRGVGNIYEISKNMYQEDRD 116
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
S + +F + + + + V PLA + N+L ++ R
Sbjct: 117 ESLISYYIYTFKVTIFLLLLFIGIIAVMALGPLAY---------IFNILYSLFGIRHIFL 167
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+ L+ +++ +P ++ G + +V Y F+ + ++Y L
Sbjct: 168 YFLMVFCLMSIYMIVPRIRTHHSDAFQGALVASALMLVLYYGLNIYF-QFADFQSVYGPL 226
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ I+ L F +G + + + +
Sbjct: 227 SFIVVILFVFDWAAEIFYIGMYITNLLHLRRKEDE 261
>gi|261416861|ref|YP_003250544.1| ribonuclease BN [Fibrobacter succinogenes subsp. succinogenes S85]
gi|261373317|gb|ACX76062.1| ribonuclease BN [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302327826|gb|ADL27027.1| putative ribonuclease BN [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 321
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/271 (13%), Positives = 91/271 (33%), Gaps = 13/271 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
I+ + F+ G A+ ++ + L++V P ++ ++ +G F+ + +V
Sbjct: 24 FVKIMVVTGKSFLYYHGMTRAASLTYTTLVAVVPLLIMLTSITLAVGFGNFISDYLPIVI 83
Query: 68 GAWPEVI-AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
+ I D + +P K L I A +L + N + R
Sbjct: 84 DMLNLDWPTEQIMDIVENAEHIPIKKLGFIGAGGLFVTFILAFGSLETNFNVVWENKTSR 143
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALA-YVRKFFPALGNLLLIIWNGRIYAT 185
+ I ++L+ + + + + + L + F ++ + Y+
Sbjct: 144 TLIRQIKIYTPFLLIGAAVVGMFAGFVNHVQNVLKVIIVDGFHFSPEVIKALITVFWYSA 203
Query: 186 MLALFIGLIFVHLFLPAAKS------KIMSILPGVIFTWISWVVGAVLFTHYI-----VT 234
+ +IF+ L+ A+ + + + + + ++ +
Sbjct: 204 FHIAALLVIFIMLYALPARPAGHKPYTRRKLFLASMLSTLLSWLAINIYVKILMLIQTAM 263
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ S Y LA I L L+ + + G
Sbjct: 264 VTRMSIFYGSLAFIPLFLFLLFGVWSIILCG 294
>gi|188996046|ref|YP_001930297.1| ribonuclease BN [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931113|gb|ACD65743.1| ribonuclease BN [Sulfurihydrogenibium sp. YO3AOP1]
Length = 302
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 44/277 (15%), Positives = 108/277 (38%), Gaps = 21/277 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
F I+Y +++ ++ + +S ++ L+++FP + F ++ + + + +++
Sbjct: 17 FKILYLSLKDYIANNYAYHSSALTFYFLMTIFPLLFFIISVISLIAIIN-ISEIYFILYK 75
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+P + + + A+ I+ L + +FS + A+ + + Y
Sbjct: 76 IFPNSAESFLNTVLKLSQSQVAQKSIVITILLSIFFSKDLFVAISQAFSYIYEAKVAEGK 135
Query: 129 YITRLISFGYVLLASVTLVIMSFVFV--------------------AIPLALAYVRKFFP 168
I + L ++ L+ F+F+ I ++
Sbjct: 136 VILIISMLALPFLVTLILIFYVFLFIVKFLFSNIEKISSGVSKDILFIERIKNFLEFINN 195
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
LG L +I+ I L +++ F +KS + +L IF I + + F
Sbjct: 196 KLGLLQIILNLSEILIFALIIWLIYYFFTPVQEKSKSFVKHVLTISIFISIIMFLLKIAF 255
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
T I+ F + + +Y + SI T ++++ + ++G
Sbjct: 256 TFLILNFLSTNPLYLTMGSIFTFIIWVKLCFDILLIG 292
>gi|160915379|ref|ZP_02077591.1| hypothetical protein EUBDOL_01387 [Eubacterium dolichum DSM 3991]
gi|158432770|gb|EDP11059.1| hypothetical protein EUBDOL_01387 [Eubacterium dolichum DSM 3991]
Length = 275
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/270 (15%), Positives = 92/270 (34%), Gaps = 26/270 (9%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
++ E F +G +S S LL++ P I+ + L + + V++ V P
Sbjct: 4 LFRIYEEFTSFEGSLFKYALSFSILLAIAPSILLFSMLFRYAYLP--IDMVLNFVRSFLP 61
Query: 72 EVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
++ A+ + L + L I+A + Y +S + + + +V +
Sbjct: 62 DINAETLDQIFLFFVDKDYGILSFIITACTSFYLASRSIFSFLLISAAHEKVDVPKWSIR 121
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ + L + + L + +
Sbjct: 122 IKAVVMFVFLTVVLLAGV-----------------------YLTTKFSKLFPLISAGLML 158
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L K + G +FT + + A LF + F++Y +Y +A ++T
Sbjct: 159 FMFTATYRMLSFRKRNVSFGFIGGMFTTLGIMGLADLFISIVHNFTSYEDIYGPIAVLVT 218
Query: 251 CLVFLYMLGVFFILGAELNASMIIYYWRKK 280
L+ +Y++ LG +N Y ++
Sbjct: 219 SLLAIYLISCIIYLGFCINMVFEEDYGNEE 248
>gi|226363239|ref|YP_002781021.1| hypothetical protein ROP_38290 [Rhodococcus opacus B4]
gi|226241728|dbj|BAH52076.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 333
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 17/268 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
F+++ G +A+ I+ +S+FP ++ + + GF+ G +ID +P
Sbjct: 23 VTYKFLDDQGVYLAALIAYYGFISLFPLLLLLSTVLGFVLSGRPDLQQDIIDSALSQFPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ A I + A Y A + ++N A+ V
Sbjct: 83 IGADLADP----HRIGGGVTGLVIGLVGALYGGLGVALACQNAMNTAWSVPRNMRPDP-- 136
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ ++ + + + A +L + A + +
Sbjct: 137 --------IRGRLRGLLLLGTIGLAVLGTAAVAAVGAATHLSGSFSVLLMLAAITINSVI 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTC 251
+ A + + PG + + W V +Y+ ST S A ++
Sbjct: 189 FVLAFRLATARPLSVADVAPGAVAAAVLWQVLQSFGAYYVSKVVSTASVTNGVFAVVLGL 248
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L FL++ ++ E+N + +
Sbjct: 249 LAFLFLAAAAIVVCVEINVVRVDRLHPR 276
>gi|298345295|ref|YP_003717982.1| ribonuclease BN family protein [Mobiluncus curtisii ATCC 43063]
gi|298235356|gb|ADI66488.1| ribonuclease BN family protein [Mobiluncus curtisii ATCC 43063]
Length = 368
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/260 (13%), Positives = 82/260 (31%), Gaps = 10/260 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPF--IVFGANLAGFLGAHQFVPTVIDVVFGA 69
A + +A IS +AL S+ ++ T+ V
Sbjct: 13 FMRAYLRYQNASANLLAGGISYTALFSMAGIVTLIIMTAQVMIFAFPLTRDTIFRDVNQW 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF---SSNGVEALRISLNRAYRVVEMR 126
P I ++ A+ + + + V ALR+S+ + + +
Sbjct: 73 IPGAIQVDGQPGLIDPAAIASPSFTWGTLVVLVVSIMAGIRVVAALRVSIQTVFGLPQRP 132
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYA 184
+ + L L+ + ++ S + + + +++ P L +I G
Sbjct: 133 GAGWKNTLRDVCMFLVLFLGGILASVLGSGSVVVVQTLQRRLPLALPAPSGLINAGAFLL 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
T + L F +L ++ + G + Y+ + YA
Sbjct: 193 TGALTTLILAFTLRYLALVRAPRRDLWIGTGTLGFLSTALQMS-GVYLA--GSVPPAYAP 249
Query: 245 LASIMTCLVFLYMLGVFFIL 264
I+T ++++ +L F+
Sbjct: 250 FTLILTIVLWVNVLCRLFLY 269
>gi|330004666|ref|ZP_08305006.1| putative tRNA-processing ribonuclease BN [Klebsiella sp. MS 92-3]
gi|328536542|gb|EGF62877.1| putative tRNA-processing ribonuclease BN [Klebsiella sp. MS 92-3]
Length = 160
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 2/144 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-TVID 64
+ + E+ +A +++ +LLS+ P I L V +
Sbjct: 14 RPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRH 73
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
+F + I I Q +A ++ + + A S + ++ +LN +R
Sbjct: 74 FIFANFIPATGDVIQGYIEQFVANSSR-MTAVGAFGLIVTSLLLMYSIDSALNTIWRSTR 132
Query: 125 MRSWYITRLISFGYVLLASVTLVI 148
R + + + + L +
Sbjct: 133 SRPKVYSFAVYWMILTLGPLLAGA 156
>gi|183219700|ref|YP_001837696.1| hypothetical protein LEPBI_I0276 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909835|ref|YP_001961390.1| ribonuclease_BN [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167774511|gb|ABZ92812.1| Ribonuclease_BN [Leptospira biflexa serovar Patoc strain 'Patoc 1
(Ames)']
gi|167778122|gb|ABZ96420.1| Hypothetical protein; putative membrane protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 278
Score = 63.1 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 51/271 (18%), Positives = 102/271 (37%), Gaps = 4/271 (1%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I D +AS +S + LL++FP +V L G L + + + D + P
Sbjct: 4 IRRFFSEVYLYDVHGLASELSFTFLLTLFPLLVVFVTLLGLLQDPRTINLMTDQIGKFLP 63
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
I +PI + + V + + IS + S + +L R + +
Sbjct: 64 APIFQPIDKSVENLTKVKSYNVIAISIAISFISSLTIFGTISKALRFISRDETQVGFIAS 123
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ I+F ++++ V LV ++ I + + F + +
Sbjct: 124 QWINFRLLVISLVLLVFYFYLTYGIVSIERVLYQSFRFAF-FRNHPYLSVSLIILPYSIG 182
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT---FSTYSTMYAGLASI 248
F + ++ AK+ + LPG IF + + + F Y+ YS Y ++ +
Sbjct: 183 LFTFYYAYITKAKTTLKENLPGAIFASLLVLGMSFGFQFYLKMKNVGVNYSLAYDLISKM 242
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ +++ Y+ FFI G N + +K
Sbjct: 243 VVLMLYTYINSTFFIWGFLWNQVLADDRGKK 273
>gi|254822852|ref|ZP_05227853.1| hypothetical protein MintA_23184 [Mycobacterium intracellulare ATCC
13950]
Length = 340
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 101/273 (36%), Gaps = 18/273 (6%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFG 68
+I I + ++ G +A+ I+ AL+S+FP ++ G + G V+
Sbjct: 17 VIVAVIYKYNDDQGGYLAALITYYALVSLFPLLLLLTTALGVVLAGRPDLQAQVLHSTLS 76
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTI-SALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+P + ++ + + I L A Y +AL+ +++ + V + +
Sbjct: 77 QFP-----VLGSQLHHPEGLSGGAVGVIVGLLGALYGGLGVGQALQNAMDSVWAVPKHKR 131
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
+ + + +++ V + +A + A G + ++ G A ++
Sbjct: 132 PNP---------IRSRLRSLLLLLVLGSAAIAATVLAAVGHAAGAVGILETAGLALAAVV 182
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY-STMYAGLA 246
+ + A +LPG + W + Y+ S + A
Sbjct: 183 INALICLVAFRVTTARALTYRQVLPGAVAAAFIWQMLQWFGAGYVAHTVKRASATNSVFA 242
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
++ L FL++ V +L AE+N ++ + +
Sbjct: 243 LVLGALAFLFLASVALVLCAEVNVVLVEKLYPR 275
>gi|311897919|dbj|BAJ30327.1| hypothetical protein KSE_45440 [Kitasatospora setae KM-6054]
Length = 305
Score = 62.8 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/265 (14%), Positives = 78/265 (29%), Gaps = 22/265 (8%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ A+ + + + A+ ++ A LS P + A A H ++ D +
Sbjct: 45 LVGRAVSNLIRVNLLDNATRLAAQAFLSALPALFVIAVFAPATLKHSVTGSLRDQL--GL 102
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ + + A+ + A+ ++ AL+ V E
Sbjct: 103 EGTAQQQVQQLMSTPADGAAQSFGVLGAVVTLASATALSRALQR-------VCERAWEMP 155
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
L + F+ V +PL + + + LA
Sbjct: 156 KNSARLALWRWVVWLLGWLVFLVVQVPLRKGFGAGPWLGV------------PLLFLAST 203
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST-MYAGLASIM 249
+ L + + +LPG + + V V Y+ T S + +
Sbjct: 204 GVWWWTQHLLLGGRIRWYPLLPGAVLCGVGEVCLGVASQVYLPHAMTTSVEKFGPYGVVF 263
Query: 250 TCLVFLYMLGVFFILGAELNASMII 274
T L +L +L L L +
Sbjct: 264 TALSWLIVLFSAVTLALVLGRVLAE 288
>gi|266625410|ref|ZP_06118345.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288862684|gb|EFC94982.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 127
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ F ++ A+ S +++ FPFI+ + + ++ V+ P
Sbjct: 9 KQIYDKFSRDEMTVYAAQASFFTIIAAFPFIMLLMAMIQLIPT-ITKSNLLMVITNIVPA 67
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + + + + +++A+AA + +S G+ ++ LNR + + R++ +TR
Sbjct: 68 NLKSLVFGIVENIYTNSPATVLSVTAIAAIWSASRGMLSIERGLNRVFGKRKKRNYVVTR 127
>gi|158317305|ref|YP_001509813.1| ribonuclease BN [Frankia sp. EAN1pec]
gi|158112710|gb|ABW14907.1| ribonuclease BN [Frankia sp. EAN1pec]
Length = 332
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 66/265 (24%), Gaps = 21/265 (7%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + D + ++ L+ FPFI+ A L+ + + +
Sbjct: 53 DLTSRLRQGDLINSSMSLAALILMMFFPFIIALAALSPLRPGGAAEIIIRRM---GLNQD 109
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + G + AL ++ + +RV
Sbjct: 110 AAEAVERLFTPQDETVHNGWTVVGALWLILGGLTLAATVQSVYVQVFRVQP--------- 160
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + V++ + AL + L L
Sbjct: 161 --------LGLRGIPAQVVWLCELIVFLAGATGAGALITSTTTGQICYGLLSTTGLLFLL 212
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH-YIVTFSTYSTMYAGLASIMTCL 252
L + P FT + V+ + + T Y + + T L
Sbjct: 213 WIGIRVLTLGRIGWREAWPAAAFTTVGLTGLGVVSRFTFSASIVTNERNYGSIGVVFTIL 272
Query: 253 VFLYMLGVFFILGAELNASMIIYYW 277
+L GV GA +
Sbjct: 273 SWLIGFGVVLTGGAIVGMWYNETRK 297
>gi|152965828|ref|YP_001361612.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
gi|151360345|gb|ABS03348.1| ribonuclease BN [Kineococcus radiotolerans SRS30216]
Length = 351
Score = 62.4 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 41/271 (15%), Positives = 93/271 (34%), Gaps = 22/271 (8%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
+ F E+ G +A+ ++ LLS+ P ++ + + G++ G V+D P
Sbjct: 23 VVYKFFEDQGPYLAALVAYYGLLSLVPLLLLLSTILGYVLAGNPGAQQAVLDSAVTQIPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYI 130
+ + L + Y S A++ + N A+ V E + +
Sbjct: 83 LGQEVGDPGSLGGGGAGLAIGIAGAL----YGSLGVGLAVQNATNIAWGVPRNERPNPFK 138
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
RL S ++ A + +V + + V + ++ +
Sbjct: 139 ARLRSLLLMVTAGLFVVGTTVLNVVLADV-----------FVDDGVLRWASRLGYTVLAA 187
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFST--YSTMYAGLASI 248
+G A + I ++LPG + + W F +V + S ++
Sbjct: 188 VGFTMAFWLAVAHRPPITTVLPGALTMAVLWQFLQR-FGQGLVNLVSERASVSNQVFTAV 246
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ + FL++ +L E + + + +
Sbjct: 247 LGLIAFLFITSCVVVLCVEADVVRVRRLYPR 277
>gi|310829420|ref|YP_003961777.1| YihY family protein [Eubacterium limosum KIST612]
gi|308741154|gb|ADO38814.1| YihY family protein [Eubacterium limosum KIST612]
Length = 274
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/265 (12%), Positives = 102/265 (38%), Gaps = 2/265 (0%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++++ + H +A+ +S LL+ PFI+ N + A V++
Sbjct: 2 KLLYEFYFFVKNHKKNYSILNLAAQLSYRVLLAFIPFIMLIYNFFSWF-AQGLNDQVLES 60
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISA-LAAAYFSSNGVEALRISLNRAYRVVE 124
+ +P + + I Y S V +L +++N+ + E
Sbjct: 61 LKVLFPGFLDEMFNTAAANAAGPQTSHWANIVFGFFILYASVCAVRSLILTINKVMLIPE 120
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
R++++ ++ Y+++ + ++++ ++++ ++ + +
Sbjct: 121 KRNYFLVWGLAVLYLVILVILILVVFYLYIFTQKISTSFFEYINLSDIFIKFWQGFTLIY 180
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + + ++++ P+ + LPG +F + W+ L+ +I +++
Sbjct: 181 ISAIIALLVTAIYMYTPSVRMSFFFSLPGGVFVSLGWLSIIGLYEAFIKNHLQIESLFNS 240
Query: 245 LASIMTCLVFLYMLGVFFILGAELN 269
L + ++ +Y+ + G +N
Sbjct: 241 LEGPFSLIIVVYVFCIILTFGCVIN 265
>gi|213422646|ref|ZP_03355708.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E01-6750]
Length = 97
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/96 (23%), Positives = 38/96 (39%)
Query: 175 LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+I N +L +I ++ +P + L G + + G F YI
Sbjct: 2 TVIDNVLRILPLLLSWISFWLLYSIVPTTRVPNRDALVGAFVAALLFEAGKKGFALYITM 61
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
F +Y +Y LA I V++Y +LGAE+
Sbjct: 62 FPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITV 97
>gi|313672829|ref|YP_004050940.1| ribonuclease bn [Calditerrivibrio nitroreducens DSM 19672]
gi|312939585|gb|ADR18777.1| ribonuclease BN [Calditerrivibrio nitroreducens DSM 19672]
Length = 401
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 89/261 (34%), Gaps = 1/261 (0%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
F + + V D + I+ ALLS P ++ + + +
Sbjct: 6 IFKRFLLNLVLTFFYMVSNDILLFNAAITYYALLSFIPMLLIFGLVLRKIFLYFPQSVRY 65
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
++ + + + G L+ S+ + ++ + +R+
Sbjct: 66 FEEMMGTVDIEMLEYVNILGLIKESNVAGFGIFGILSIFLTSTIFLRSINTVFKKIFRIK 125
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
++ + L+ F V ++I+ VA+ ++ + + ++I +
Sbjct: 126 SVKETILHSLMPFFVYFSFLVIIIILLLSKVALLFLENFLVFYVDIDLSYPILILEKFSF 185
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+L L + FL + + + + + + F Y S Y+ +Y
Sbjct: 186 LPLLFFLTLLSISYHFLSLRRLSWIDSIKLSLLFGFTIYCFNIAFK-YFYNISFYNAVYG 244
Query: 244 GLASIMTCLVFLYMLGVFFIL 264
L+S++ L ++Y+ + F+
Sbjct: 245 ALSSLIITLAYVYIFFLSFLF 265
>gi|315444780|ref|YP_004077659.1| hypothetical protein Mspyr1_32080 [Mycobacterium sp. Spyr1]
gi|315263083|gb|ADT99824.1| predicted membrane protein [Mycobacterium sp. Spyr1]
Length = 341
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 82/270 (30%), Gaps = 12/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ I ++++ G +A+ ++ A +S+ F + P + +
Sbjct: 17 FVIAVIYKYLDDQGNYLAALLAYYAFVSL--FPLLLLLTTTLGVLLWNRPQWRAEIIDSA 74
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I + A Y +AL+ +++ + V R
Sbjct: 75 ISQFPLIGEQLSRPESLSGGTTAVVIGIVGALYGGLGVGQALQNAMDTVWAV--PRYVRR 132
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ S Y +L + L + NL + + + ++L
Sbjct: 133 DPIKSRVYSILLLIVLGSFLVGTTLLTGLGRNWA-------NLGFLGTSAVVVGSVLLNA 185
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIM 249
+LPG + + W Y+ ++ S + A ++
Sbjct: 186 AVCAVALRVTTVRPLTWTQVLPGAVLAAVLWQALQWFGATYVSHVVASASVTNSVFAIVL 245
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L FLY++ F++ AE+N + +
Sbjct: 246 GLLAFLYLVSTAFMICAEINVVRVDRLHPR 275
>gi|145224447|ref|YP_001135125.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK]
gi|145216933|gb|ABP46337.1| ribonuclease BN [Mycobacterium gilvum PYR-GCK]
Length = 341
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/270 (13%), Positives = 82/270 (30%), Gaps = 12/270 (4%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
+ I ++++ G +A+ ++ A +S+ F + P + +
Sbjct: 17 FVIAVIYKYLDDQGNYLAALLAYYAFVSL--FPLLLLLTTTLGVLLWNRPQWRAEIIDSA 74
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I + A Y +AL+ +++ + V R
Sbjct: 75 ISQFPLIGEQLSRPESLSGGTTAVVIGIVGALYGGLGVGQALQNAMDTVWAV--PRYVRR 132
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ S Y +L + L + NL + + + ++L
Sbjct: 133 DPIKSRVYSILLLIVLGSFLVGTTLLTGLGRNWA-------NLGFLGTSAVVVGSVLLNA 185
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIM 249
+LPG + + W Y+ ++ S + A ++
Sbjct: 186 AVCAVALRVTTVRPLTWTQVLPGAVLAAVLWQALQWFGATYVSHVVASASVTNSVFAIVL 245
Query: 250 TCLVFLYMLGVFFILGAELNASMIIYYWRK 279
L FLY++ F++ AE+N + +
Sbjct: 246 GLLAFLYLVSTAFMICAEINVVRVDRLHPR 275
>gi|256395386|ref|YP_003116950.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256361612|gb|ACU75109.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 303
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/265 (9%), Positives = 78/265 (29%), Gaps = 27/265 (10%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ A+ + +A+A+ I ++ P + + ++ +
Sbjct: 49 EVLRVALAPETIDRCFAVAAQI----FITAVPMALAVLAFLPHQLRDRVRESLSAQLG-- 102
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
E A + + + A + +++ L+ R++ + R
Sbjct: 103 -IEGSAAQSVNAFFNGQDELRDAIGVAGLVLALFSATSLTRRLQRVYERSWMLPPGR--M 159
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + + +L + ++ L A+
Sbjct: 160 KSSAVRWLAWILVWIAVLSAQ-----------------GPLRAGSGWWRFWGWTASAAMS 202
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLASI 248
+ L + ++LP + T ++ + + + S Y +
Sbjct: 203 VALWWWTPHLLLLRRVGWRTLLPTALLTGLAQTAIGIGSRFVMPRVTGRSVAEYGPFGLV 262
Query: 249 MTCLVFLYMLGVFFILGAELNASMI 273
++ + +L ++ +LGA + +
Sbjct: 263 LSLMSWLLVVAGVIVLGAGIGRVLA 287
>gi|228476776|ref|ZP_04061433.1| tRNA-processing ribonuclease BN [Streptococcus salivarius SK126]
gi|228251575|gb|EEK10694.1| tRNA-processing ribonuclease BN [Streptococcus salivarius SK126]
Length = 181
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 63/185 (34%), Gaps = 4/185 (2%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ + LLS+ P + + + A + V I + + + + L A +
Sbjct: 1 LTYTTLLSIVPILTVLLMILSSIPALESVREQISDLIYSNLLPQSGLQVSQYLNDFAEKS 60
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
L I A+A S + + + N+ +RV + + + + + L + L
Sbjct: 61 SNLTAIGAMALFVTSIMTLTTIERAFNQIWRVEDRSGGVKSIVRYWTIITLGPLVLGTAF 120
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
V + ++ + I + G I ++ F+P AK + +
Sbjct: 121 IVSSTVQSLSFLNQQIGGYGIDWNFWIQ----LVSFAITIAGFIGMYWFIPKAKVPLKNA 176
Query: 211 LPGVI 215
+
Sbjct: 177 AIAGV 181
>gi|315655714|ref|ZP_07908612.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii ATCC 51333]
gi|315489778|gb|EFU79405.1| brp/Blh family beta-carotene 15,15'-monooxygenase [Mobiluncus
curtisii ATCC 51333]
Length = 368
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/260 (13%), Positives = 81/260 (31%), Gaps = 10/260 (3%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPF--IVFGANLAGFLGAHQFVPTVIDVVFGA 69
A + +A IS +AL S+ ++ T+ V
Sbjct: 13 FMRAYLRYQNASANLLAGGISYTALFSMAGIVTLIIMTAQVMIFAFPLTSDTIFRDVNQW 72
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF---SSNGVEALRISLNRAYRVVEMR 126
P I ++ A+ + + V ALR+S+ + + +
Sbjct: 73 IPGAIQVDGQPGLIDPAAIATPSFTWGTLVVLVVSIMAGIRVVAALRVSIQTVFGLPQRP 132
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA-LGNLLLIIWNGRIYA 184
+ + L L+ + ++ S + + + +++ P L +I G
Sbjct: 133 GAGWKNTLRDVCMFLVLFLGGILASVLGSGSVVVVQTLQRRLPLALPAPSGLINAGAFLL 192
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
T + L F +L ++ + G + Y+ + YA
Sbjct: 193 TGALTTLILAFTLRYLALVRAPRRDLWIGTGTLGFLSTALQMS-GVYLA--GSVPPAYAP 249
Query: 245 LASIMTCLVFLYMLGVFFIL 264
I+T ++++ +L F+
Sbjct: 250 FTLILTIVLWVNVLCRLFLY 269
>gi|218265679|ref|ZP_03478844.1| hypothetical protein PRABACTJOHN_04555 [Parabacteroides johnsonii
DSM 18315]
gi|218221437|gb|EEC94087.1| hypothetical protein PRABACTJOHN_04555 [Parabacteroides johnsonii
DSM 18315]
Length = 148
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 38/110 (34%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
++E + + I A+ F E+ AS ++ S LLS+ P + +A G V
Sbjct: 39 LKELYINIIKTIILAVRGFQSENLQTKASALTYSTLLSIVPLLAVLLGIAKGFGFQGTVR 98
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE 110
+ F ++K + + + + Y N +
Sbjct: 99 QELFDYFPGHEAELSKAFEFVESYLAQAQGGVIIGVGLILLFYTVINLIS 148
>gi|88799312|ref|ZP_01114890.1| probable Ribonuclease BN [Reinekea sp. MED297]
gi|88777851|gb|EAR09048.1| probable Ribonuclease BN [Reinekea sp. MED297]
Length = 262
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/253 (11%), Positives = 76/253 (30%), Gaps = 11/253 (4%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
AS ++L+ L ++ P + + + Q V ++
Sbjct: 21 HIGQHASVLTLTTLFALVPLVSGVLWFLSQVPSVQSQLIEQFDVLLSYLIPEQALSWRSR 80
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
L SA+ V + +L+ +++ + R + L
Sbjct: 81 ADEWVQDVSSLQGYSAILLFGSLIFLVNKVDKTLHWVFQIEQGRGRRRWLHYLWVMPALM 140
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+V M+ V + + + P + ++ +++ L+ V+
Sbjct: 141 MTLIVAMTLVLLLQIMLGTGLLALLPGVN-----------LTSVPVMWLLLMAVYRLSSR 189
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ + ++ F +T +S ++ +++ L++ M F
Sbjct: 190 GMITWRDNAAVSLGVTVLFLFLKFGFAWLYITLPNWSIVFGVFSAVPLFLLWTQMAWSIF 249
Query: 263 ILGAELNASMIIY 275
+ GA + +
Sbjct: 250 LYGAVMLRWLTHR 262
>gi|84516767|ref|ZP_01004125.1| putative ribonuclease protein [Loktanella vestfoldensis SKA53]
gi|84509235|gb|EAQ05694.1| putative ribonuclease protein [Loktanella vestfoldensis SKA53]
Length = 101
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 34/64 (53%)
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + G + + W+ + + Y+ F++Y+ +Y + +++ +++LY+ +LG
Sbjct: 24 RGRWVTLGALVVIVLWIAASAGLSFYLTNFASYNEVYGSIGAVIGMMLWLYVSAYLILLG 83
Query: 266 AELN 269
A LN
Sbjct: 84 AALN 87
>gi|291519049|emb|CBK74270.1| Predicted membrane protein [Butyrivibrio fibrisolvens 16/4]
Length = 193
Score = 60.4 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/192 (15%), Positives = 78/192 (40%), Gaps = 3/192 (1%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
++ ++ A A+ + +++ P ++ +AG++ + + ++
Sbjct: 2 WTFLGYGKTYLDKCGRDNIGAYAAQTAYFMIMTSIPVMMLLVWIAGYIPS---IGQYLNE 58
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
+ P ++++++ + G +IS L A + S + L + LN+ ++ E
Sbjct: 59 LVYNVLPNEFSPYMAKVIRLVTQASVGAISISVLMAIWASGKAFQNLMVGLNQVNKIEET 118
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+W R+ + Y L+ + +V++ + V Y ++ L ++ I R
Sbjct: 119 RNWVARRIRAIFYTLVLLMVIVVIMLMLVFTQNLQYYADNYYGFLAYVVGIRPLFRSIFV 178
Query: 186 MLALFIGLIFVH 197
+ L F++
Sbjct: 179 LSFWLSYLRFIY 190
>gi|184201440|ref|YP_001855647.1| hypothetical protein KRH_17940 [Kocuria rhizophila DC2201]
gi|183581670|dbj|BAG30141.1| hypothetical membrane protein [Kocuria rhizophila DC2201]
Length = 389
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 80/276 (28%), Gaps = 16/276 (5%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--FVPTVIDVVFGAWP 71
+ H++ G MA+ ++ L + +V ++ + P
Sbjct: 62 RVVAHYMFHGGPLMAAGLAYQLLFASTALLVIFFAALATFLGTNSPLQQNLVAGLVEKIP 121
Query: 72 -----EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE-M 125
+ L P T++ + + V +R++ R + +
Sbjct: 122 GLLDVGDGRGGVIPLRLLEDTGPFTVASTVAVAVLLFTAWRWVAGVRLATRRMFELPPAP 181
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN------ 179
G++++ V L+ + V V A+ V + +G L W
Sbjct: 182 GVPMAAVPRDLGWLVVIGVLLLASATVSVFASGAVDGVIGWLGDIGLTRLQPWLDGGVKS 241
Query: 180 -GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
++ + + + K ++ V+ V + I
Sbjct: 242 AVTFAVGLVVDCVMSFSLVRGVAQLKLHRKALAVTVVVGAAGSQVLRYGGSEVIGRAGE- 300
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
+ A ++ L++ + G +L A A +
Sbjct: 301 NPYLLSAAVLVGVLLWFNLYGQILLLAAASGAVVQA 336
>gi|301167881|emb|CBW27466.1| putative transport-related membrane protein [Bacteriovorax marinus
SJ]
Length = 303
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/291 (12%), Positives = 89/291 (30%), Gaps = 22/291 (7%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG-FLGAHQFVPTVIDVVF 67
+ + +I F + G +AS + LL++ PF + + G F+G I +
Sbjct: 6 YHLFKSSILLFNHKRGTTLASSSTFYILLTIVPFFLLLIRVVGIFIGDINSTQLKIFNLV 65
Query: 68 GAWPEVIAKPITDEILQVLAVP---AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ +A I ++ ++ P I+ S + ++ L
Sbjct: 66 ESFFPDVAPEILTQVQGIVKGPLFAGGEFTVINFAILLISSLSFFNSIWNGLFLITEDRS 125
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFV--------FVAIPLALAYVRKFFPALGNLLLI 176
+ F + + + Y+ FP+L ++
Sbjct: 126 YLRFTKHLKGIFVIGVTIMCLTLFFFLPSLFFYSGQLFTNNTVVDYLATNFPSLLSVSDY 185
Query: 177 IWNGRIYATMLA---------LFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
+ + F++ + + + + + +VG L
Sbjct: 186 FSGFNYGFSYILKSNIFHAIIFTFFFAFLYRWFFSWRLSLKEAFISSLIFSCLVIVGKNL 245
Query: 228 FTHYIVTF-STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
F Y + Y +++ ++++Y FF GA + +++
Sbjct: 246 FWIYFIYVRDNLIKNYGDYYTLIVGVIWIYFTMSFFYFGACVCTTLLKDRR 296
>gi|293390888|ref|ZP_06635222.1| tRNA-processing ribonuclease BN [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290951422|gb|EFE01541.1| tRNA-processing ribonuclease BN [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 135
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 12/118 (10%), Positives = 40/118 (33%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
+ F + A +++ S +L++ P I+ ++ V +
Sbjct: 11 FWQRFNQNKLTQAAGYLTYSTMLAIVPLIMVVFSIFSAFPVFNEVTGALKEFIFTNFAPS 70
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
A + + + +K + + ++ + + ++ +LN + R ++
Sbjct: 71 AGDVVGQYIDEFVNNSKQMSAVGIISLIVVALMLINSIDRTLNGIWHDTSTRPYFYLF 128
>gi|238062593|ref|ZP_04607302.1| LOW QUALITY PROTEIN: ribonuclease BN [Micromonospora sp. ATCC
39149]
gi|237884404|gb|EEP73232.1| LOW QUALITY PROTEIN: ribonuclease BN [Micromonospora sp. ATCC
39149]
Length = 327
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/266 (16%), Positives = 100/266 (37%), Gaps = 17/266 (6%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVV 66
FD ++ A + E G +A+ I+ +VF + ++ G + + +
Sbjct: 41 FDHLWRAGNLYAEVLGGRLAAAIAYYGFFAVFALALVAYSIFGAILEDNDEVSNAAAGFL 100
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
P + + I A + + + + + VEA+R S Y + +
Sbjct: 101 RENLPFLDPEQI--------AQSSNTVGVVGLVILVFTGIGWVEAIRSSQRLMYGLNQQP 152
Query: 127 -SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
+ + RL+ G ++ V L + A+ L ++ + ++G + +
Sbjct: 153 GNLVVRRLVDLGVLVGVFVLLGLSVAAVDALESLLRFLLRSTGSVG-----LTVVSAALS 207
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
+L + + + +P + + P V + + + Y+V + + Y +
Sbjct: 208 VLINAVLAAALLVAVPRLRMSRRRLRPVVFAVAVGITLLNTVGRFYVVR-TERNPAYTVV 266
Query: 246 ASIMTCLVFLYMLGVFFILGAELNAS 271
A + L++LY+L + GA L A+
Sbjct: 267 AGAVGLLLYLYLLNQLVLFGAALAAT 292
>gi|167754796|ref|ZP_02426923.1| hypothetical protein CLORAM_00300 [Clostridium ramosum DSM 1402]
gi|237735917|ref|ZP_04566398.1| predicted protein [Mollicutes bacterium D7]
gi|167705628|gb|EDS20207.1| hypothetical protein CLORAM_00300 [Clostridium ramosum DSM 1402]
gi|229381662|gb|EEO31753.1| predicted protein [Coprobacillus sp. D7]
Length = 286
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 50/144 (34%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ V + + + L ++ + LFI
Sbjct: 117 MLISMTDEGFDTYAILVRIKAIVVFVLLVIGLVGLTLFNYLVPINSTIVMLAGLFIVFYC 176
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ +L K + L G FT V+ V F + + ++ Y+ +Y LAS++ L+ +
Sbjct: 177 FYRYLSFEKKPLSYGLIGAAFTSACIVLIGVFFFYIVNHYTRYNALYGPLASLVIMLISI 236
Query: 256 YMLGVFFILGAELNASMIIYYWRK 279
Y++ G LN + ++
Sbjct: 237 YLISSVIYFGYCLNHEYGKSFSKR 260
>gi|229818144|ref|ZP_04448426.1| hypothetical protein BIFANG_03436 [Bifidobacterium angulatum DSM
20098]
gi|229784395|gb|EEP20509.1| hypothetical protein BIFANG_03436 [Bifidobacterium angulatum DSM
20098]
Length = 327
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 85/280 (30%), Gaps = 20/280 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
I F +G +++ ++ + L + F I + + + +
Sbjct: 27 VINRFARRNGGTLSNGMAYNLLFAFFSGIWTVFAVVTLFFTKNTT-LLDWFISTLERTIP 85
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS--WYITR 132
ITD ++ ++ ++ + ++A R + + I
Sbjct: 86 GLSITDSMVDGISSTMTWTGVLTFCIFIWKVLCCLDAWRNAAWTMMDRPKPFFDPVQIRF 145
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA------------LGNLLLIIWNG 180
+ ++L+A + +V ++ + V L L +
Sbjct: 146 FDAVAFILVALMFVVSSIAGVISGGIVRRIVNLLHDLAMLPESNTTLANSMLLDLSGFLI 205
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +L + + FV + + L G + I ++G+ L +T +
Sbjct: 206 GLVFNILLMALMFCFVARIRCDKRLTVFVCLIGGLVISILQLLGSRLLG-----GATSNP 260
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ A + + L++ + + A + ++
Sbjct: 261 LMAPFSVFIGVLIWFSFIAQILMYCAAFIGQAQSMFDERE 300
>gi|213621039|ref|ZP_03373822.1| hypothetical protein SentesTyp_27477 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 205
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 66/205 (32%), Gaps = 10/205 (4%)
Query: 26 AMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+ I+ + LS+ P ++ AGF+ + + + + +
Sbjct: 1 QFGAAITYFSFLSMIPIMMVSFAAAGFILASHPNLLEDIFSKILMNVSDPTLASTLKNTI 60
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR------SWYITRLISFG 137
+ + A Y N + LR ++ R V R ++ L F
Sbjct: 61 NTAVQQRTTVGLVGLGIALYSGVNWMGNLREAIRAQSRDVWERKPQDQEKIWLKYLRDFI 120
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRK--FFPALGNLLLIIWNGRIYATMLALFIGLIF 195
++ + L+I + A + + ++ L + ++ A ++ +
Sbjct: 121 SLIGLLIALIITLSITSIAGSAQQMIISALYLDSIEWLKPAWHLIGLAISIFANYLLFFW 180
Query: 196 VHLFLPAAKSKIMSILPGVIFTWIS 220
+ LP + + +++ G I
Sbjct: 181 IFWRLPRHRPRKKALIRGTFIAAIG 205
>gi|213581023|ref|ZP_03362849.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 66
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
F YI F +Y +Y LA I V++Y +LGAE+ ++ Y K+
Sbjct: 1 KKGFALYITMFPSYQLIYGVLAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 56
>gi|111020942|ref|YP_703914.1| ribonuclease [Rhodococcus jostii RHA1]
gi|110820472|gb|ABG95756.1| possible ribonuclease [Rhodococcus jostii RHA1]
Length = 333
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/268 (14%), Positives = 86/268 (32%), Gaps = 17/268 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDVVFGAWPE 72
F+++ G +A+ I+ +S+FP ++ + + GF+ G + +ID +P
Sbjct: 23 VTYKFLDDQGVYLAALIAYYGFISLFPLLLLLSTVLGFVLSGHPELQQDIIDSALSQFPV 82
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ A I + A Y A + ++N A+ V
Sbjct: 83 IGADLADP----HRIGGGVTGLVIGLVGALYGGLGVALASQNAMNTAWSVPRNMRPDP-- 136
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+ ++ + + + A +L + A +
Sbjct: 137 --------IRGRLRGLLLLGTIGLAVLGTAAVAAVGAATHLSGSFTVLLMLAAITINSAI 188
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTC 251
I A + + PG + + W V +Y+ ST S A ++
Sbjct: 189 FILAFRLATARPLSVADVAPGAVAAAVVWQVLQSFGAYYVSKVVSTASVTNGVFAVVLGL 248
Query: 252 LVFLYMLGVFFILGAELNASMIIYYWRK 279
L FL++ ++ E+N + +
Sbjct: 249 LAFLFLAAAAIVVCVEINVVRVDRLHPR 276
>gi|58697944|ref|ZP_00372948.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
simulans]
gi|58535551|gb|EAL59534.1| ribonuclease, BN family [Wolbachia endosymbiont of Drosophila
simulans]
Length = 200
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 79/194 (40%), Gaps = 11/194 (5%)
Query: 40 FPFIVFGANLAGFLGAHQFVPTVID-VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA 98
F++ +A + + P+ I + I ++++ P + L T++
Sbjct: 10 VSFLIVLMAVASTFANFLDQYNIGWVFIIDNMPQDILSSLMPRIREIISGPPQSLLTLAI 69
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ A + +S+ +E LR LN+AY+V + + R++S L+ ++ + + +P+
Sbjct: 70 VGAVWTASSTIEGLRTILNKAYKVPVSPPYILRRVLSILQFLVITLIITLTIVFSTLVPM 129
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
+ + + + R LF + +++ LP K + + PG
Sbjct: 130 LIDFSYQG----------LSYTRYLLIEFVLFTVVSWLYFMLPNIKQNLSDVFPGSCVAV 179
Query: 219 ISWVVGAVLFTHYI 232
I W + A F Y+
Sbjct: 180 ILWTISASAFKQYL 193
>gi|213029561|ref|ZP_03344008.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. 404ty]
Length = 122
Score = 58.1 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 38/113 (33%), Gaps = 2/113 (1%)
Query: 3 EYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP-T 61
+ V + + E++ +A +++ +LLS+ P I L V
Sbjct: 11 RHTRPVRAWLKLLWQRIDEDNMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSDVSIQ 70
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRI 114
+ +F + I I Q +A K + + A + + A+
Sbjct: 71 LRHFIFANFMPATGDVIQRYIEQFVANSNK-MTAVGACGLIVTALLLMYAIDS 122
>gi|328948873|ref|YP_004366210.1| cyclic nucleotide-binding protein [Treponema succinifaciens DSM
2489]
gi|328449197|gb|AEB14913.1| cyclic nucleotide-binding protein [Treponema succinifaciens DSM
2489]
Length = 425
Score = 57.7 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 79/249 (31%), Gaps = 6/249 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ +Y + F D + AS + LLSV P + + L P + +
Sbjct: 16 IVQSLYLSSSLFFSNDLISSASACAFGFLLSVVPISMIICVVL--LRVLHASPETVSALI 73
Query: 68 GAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRS 127
+ P ++ L + A + S ++ + L R +
Sbjct: 74 SSSPFSSQIISIEDSLPKSLKLVTNFEVVIIAAVVWMSRRFFSSVIVGLKRIFGKDANSR 133
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLAL---AYVRKFFPALGNLLLIIWNGRIYA 184
+ F L + ++ F+ +++ + + P LI +
Sbjct: 134 PVKNMFLVFIGEALFVILFSLIIFIAISLKTIVLVPRFYGILEPLNHIADLISKTAAGFV 193
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ LF F + F + T S+ + F ++ + Y+ +Y
Sbjct: 194 PFIILFAATAFTYKFGSRTNPSWGISVLSSAGTCASFWILTKAFHLFV-NINRYNLVYGV 252
Query: 245 LASIMTCLV 253
L++I+ L+
Sbjct: 253 LSNIIVMLM 261
>gi|325123560|gb|ADY83083.1| putative ribonuclease (Rbn) [Acinetobacter calcoaceticus PHEA-2]
Length = 180
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 28/49 (57%)
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ F++Y +Y A++ L+++++ +LG E++ ++ ++ K+
Sbjct: 1 MSNFTSYEIIYGAFAAVPIFLLWIFLSWNIILLGVEVSFALTAFHSGKE 49
>gi|330466315|ref|YP_004404058.1| ribonuclease BN [Verrucosispora maris AB-18-032]
gi|328809286|gb|AEB43458.1| ribonuclease BN [Verrucosispora maris AB-18-032]
Length = 282
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 51/283 (18%), Positives = 87/283 (30%), Gaps = 11/283 (3%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
M E + I A D A+ I+ ++V P + L + V
Sbjct: 1 MGEAWRRTKRITRAAFRPVRGRDLSLHAAAITFYGAIAVVPVALLAIWLTTLVAGADRVR 60
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ A P+ I + L L ALAA +S E LR +
Sbjct: 61 RLTSYAVEALPDAIGA---PHAVAALVEAGVDLTPWLALAAVLPASLYGEGLRRAFVS-- 115
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V RS +LL + + V + L L ++
Sbjct: 116 -VAAPRSDEHLIGWRGRLLLLPLLAPAPALLLAVLLALPTTTGLVRRGGWAGALGVV--L 172
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
A L L L++V + A +S L FT + F +
Sbjct: 173 SFLAVWLVLTPVLLWVFRVVGRASPDWLSALLVGSFTAANLSGFLHGFVLFASLPLDLGV 232
Query: 241 MYAGL---ASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ GL + + L++LY+ V + G ++ + R++
Sbjct: 233 PFGGLDEVGAAVAILLWLYVFHVIVLAGYSATLALSGWRDRRR 275
>gi|29833561|ref|NP_828195.1| hypothetical protein SAV_7019 [Streptomyces avermitilis MA-4680]
gi|29610684|dbj|BAC74730.1| hypothetical protein [Streptomyces avermitilis MA-4680]
Length = 286
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/263 (10%), Positives = 72/263 (27%), Gaps = 26/263 (9%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
G+ + ++ SAL ++ P V G + + V + + +
Sbjct: 2 GFDRSMALASSALTTLLPLAVLGGTVVSSFAHYDAAERV---IKRYGLTGAGAEAVESLF 58
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ + + + A + + + + + + + L
Sbjct: 59 SPAQHTSASVGIFGVVFLTISVLSFARATQRLFEQTWELKPLSMRNTRNGLWWILTLGGY 118
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ + + L++ L A
Sbjct: 119 TVVTGWLSAVLGGGRLGLAALVCD------------------VPVTAAFLVWSGWILSAK 160
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTCLVFLYMLGVFF 262
+ +LP I + +V T Y+ F++Y+ Y L ++ + L+ +
Sbjct: 161 RINRPDLLPFGIAAALLEAAYSVGTTVYLPRLFNSYAARYGALGAVFAMISALFGGMLVI 220
Query: 263 I----LGAELNASMIIYYWRKKP 281
+ LG E+ + +P
Sbjct: 221 VASAALGREVRDELTRIRHGHRP 243
>gi|293363351|ref|ZP_06610173.1| ribonuclease BN-like family protein [Mycoplasma alligatoris A21JP2]
gi|292553020|gb|EFF41771.1| ribonuclease BN-like family protein [Mycoplasma alligatoris A21JP2]
Length = 356
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 87/273 (31%), Gaps = 8/273 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ A F + + + L+S P I+ + L
Sbjct: 78 VNRAYMKFSSREFTFIPAASGFYLLVSFVPIIIISYLILSLLSVASSGNIFNAYFIDIIL 137
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAA----AYFSSNGVEALRISLNRAYRVVEMRS 127
+ I I + K IS + + SS G + S N Y + +
Sbjct: 138 PKMVPGIETVISFLTLQLRKTEAIISLVFLGLSSLWVSSAGYGKIISSQNYIYNHKYLGT 197
Query: 128 WYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML 187
RL V++ S+ L ++ + + L + + I+ ++
Sbjct: 198 NLGNRLKGLILVVVISLYLSLLIAFTLGLDLLIG--GYDVLDKTKNSSSTFILFIFNALI 255
Query: 188 ALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
L+ G + + F P+ K + GV+ I + LF + + ++ Y L
Sbjct: 256 FLYTGFLMLFKFSPSFKLSFRAAHSGVLVASIPTWLLVSLFGF-LAKVTDFNK-YGPLGI 313
Query: 248 IMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
M +F+ F LG +N + + ++
Sbjct: 314 FMYLSIFISWFTYFMYLGIIVNEAYFKTFVSQR 346
>gi|291279024|ref|YP_003495859.1| hypothetical protein DEFDS_0622 [Deferribacter desulfuricans SSM1]
gi|290753726|dbj|BAI80103.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 323
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/254 (14%), Positives = 97/254 (38%), Gaps = 7/254 (2%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLA-GFLGAHQFVPTVIDVVFGAW 70
+ A + F ++ +S ++L +LS+FP I+ + ++ +I+ +
Sbjct: 7 LAFAFQRFKQKKLSIHSSSLALYFILSIFPTIMITLLILNALFIKSKYYTIIINELNNLI 66
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
+ L A +IS L FSS ++ L S+N + + +S
Sbjct: 67 NNNKIIELLGLTLSNFKTIAISYGSISFLIVLLFSSIFIKGLFDSVNFIFNINPKKSKTR 126
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ +S V++ + + I + +F I + L +
Sbjct: 127 -----LLLPIFSSSITVLLLIILILIKGVSILIFDYFGTNFYFNKIAYFYFKIIYFLFSW 181
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ L + + K+ +++ F+ + + + ++ +V S Y+ +Y L++I+
Sbjct: 182 LILALTYYSILGKNIKLKNLIHASFFSLVLIYLISKIY-FIVVNKSVYNLLYGSLSTIIL 240
Query: 251 CLVFLYMLGVFFIL 264
+++L+ + +
Sbjct: 241 SIMYLWFVFNILLF 254
>gi|313680295|ref|YP_004058034.1| ribonuclease bn [Oceanithermus profundus DSM 14977]
gi|313153010|gb|ADR36861.1| ribonuclease BN [Oceanithermus profundus DSM 14977]
Length = 271
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/265 (13%), Positives = 83/265 (31%), Gaps = 15/265 (5%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL----GAHQFVPTVI 63
+ + + + + A+ ++ AL S+ P ++ + G + + +
Sbjct: 6 LRRFLARLVRVYGQAHVPFFAASLAYYALFSLLPLLLLIVGVFGLMLESRPDLEQAFMLQ 65
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + + + Q L A S L + +SN AL +L+ +
Sbjct: 66 IEHLAQNLFPTSASVGETVTQALRKGAASATLTSVLVLGWTASNFFAALSYALSLIFGGR 125
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
+ +L ++ L ++ + V + L + +
Sbjct: 126 GPGWRGRLLGLVAPLLLGLALLLFSLASLAVTMVLPYLPDGPWRGFVMGS---------- 175
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LA + ++ FLP + L W + L I + Y ++Y
Sbjct: 176 LPWLATLLAFFVIYRFLPYPPPGSLHALGAAFLASSVWTGLSRLLPGLISR-TRYESIYG 234
Query: 244 GLASIMTCLVFLYMLGVFFILGAEL 268
LA + L Y+ + GA +
Sbjct: 235 PLAGFLLALFGFYLAMWILLGGAAV 259
>gi|289644250|ref|ZP_06476338.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
gi|289505932|gb|EFD26943.1| ribonuclease BN [Frankia symbiont of Datisca glomerata]
Length = 335
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 71/256 (27%), Gaps = 21/256 (8%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + D A +++ L+ FPFI+ A L+ + + +
Sbjct: 65 DLASRLRQGDLINGAMNLAALILMMFFPFIIALAALSPLRSGGAAEVIIRRM---GLSQE 121
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + G + AL + ++ R + + + +
Sbjct: 122 AAQAVERLFAPQDGTVRNGWSILGALWLILGGLSLATTVQSVYVRVFGLRPLGLRGVPAQ 181
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + L+ + + + + G L + L
Sbjct: 182 VGWLCGLIVFLAGTTTAGALLTGTIPGQ-----------------IGYGLLNTAGLLLFL 224
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH-YIVTFSTYSTMYAGLASIMTCL 252
L + + P FT + V+ + + + Y + + T L
Sbjct: 225 WAGTRILTLGRLGWREVWPAAAFTTVGLTGLGVVGRLTFSASIVSNERNYGSIGVVFTIL 284
Query: 253 VFLYMLGVFFILGAEL 268
+L GV GA +
Sbjct: 285 SWLIGFGVVLTGGAIV 300
>gi|315452855|ref|YP_004073125.1| ribonuclease BN [Helicobacter felis ATCC 49179]
gi|315131907|emb|CBY82535.1| ribonuclease BN [Helicobacter felis ATCC 49179]
Length = 279
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 86/238 (36%), Gaps = 13/238 (5%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ AS +S +LS+ P ++F A + F+ V P+ + I D
Sbjct: 39 RIFYYASSLSFYTILSLSPVLLFIALI--FVSPFSKTFEVETFFLPNSPDFMK--IGDLF 94
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
L+ + L I A E R ++ + ++ R+ F + L
Sbjct: 95 LKSFMRNNRTLGIIEIAFIALAFFLFCENYRYIASQILNAPPRKYIHLGRVKIFLFWGLG 154
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ +++++ + + + + P L LL I + + L +F H
Sbjct: 155 TGLVLVIALLMLIVAHIYIHRNIHNPYLLALLRWITLYVYFLLLFFLPTQKVFKHK---- 210
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+L T + W + F +YI+ TY +Y ++ + + ++Y+ +
Sbjct: 211 -----WHLLVWSGGTSLCWTLMKWGFVYYILYNRTYHELYGSISILWFFMSYIYISWL 263
>gi|320537961|ref|ZP_08037868.1| cyclic nucleotide-binding domain protein [Treponema phagedenis
F0421]
gi|320145214|gb|EFW36923.1| cyclic nucleotide-binding domain protein [Treponema phagedenis
F0421]
Length = 437
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/252 (13%), Positives = 86/252 (34%), Gaps = 3/252 (1%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
++ F +Y F+ D + S + + LLS P + H T
Sbjct: 24 KKGFYDFVQKMYITFMAFITNDLATITSAGAYNFLLSAVPI-FILVLIILLQVLHANPKT 82
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSS-NGVEALRISLNRAY 120
++ + + I I+D + + V F + + ++ S +++ S+ Y
Sbjct: 83 ILAFLQRSQIISIPLGISDLVAYIGNVKNFAFFESALIVFIFWMSRRFFASIQHSIRMIY 142
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + +I + + +V + A + +L++ N
Sbjct: 143 KKQIKIEPFKVSIIVIIGEIALVIFIVFSIIILTAGNAVFKTELPKRIFSPSNILVVKNA 202
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
YA + L I L ++ F+P + + +S++V + + + +
Sbjct: 203 IRYAPIFFLLIFLFTIYYFMPPVRPTKTNAFFCAATCSLSFLVLKISLNF-LHDRAKFDF 261
Query: 241 MYAGLASIMTCL 252
+Y ++ + L
Sbjct: 262 VYGFFSNFILLL 273
>gi|293401174|ref|ZP_06645318.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291305300|gb|EFE46545.1| conserved hypothetical protein [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 272
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 24/219 (10%)
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF-TISALAAAYFSSNGVEALRISLNRAY 120
+++ + P+ + I + L ++ + Y +S + + +
Sbjct: 52 ILNFIMNFIPDGNLETINQLFQFFTSKDYSILSFIVTMCVSFYLASRSIFSFLLISASHE 111
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
V + + + L + I
Sbjct: 112 EVDVPKWSIRIKSVVLFVNLAIIIVAAIFIATN-----------------------FLEF 148
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ L + + ++ L + L G +F+ I + A LF + F++Y
Sbjct: 149 LPLISSLIMLMFFYMMYRALSFRRHDWSFGLLGAMFSTICIMGLATLFVTIVKYFTSYQD 208
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+Y LAS++T L+ +Y++ G LN M Y R+
Sbjct: 209 VYGPLASLVTLLLAIYLISCIIYFGFCLNLVMEETYGRE 247
>gi|289548296|ref|YP_003473284.1| ribonuclease BN [Thermocrinis albus DSM 14484]
gi|289181913|gb|ADC89157.1| ribonuclease BN [Thermocrinis albus DSM 14484]
Length = 256
Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/263 (14%), Positives = 89/263 (33%), Gaps = 17/263 (6%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ ++I ++ + AS ++ + + ++ L + + V + P
Sbjct: 8 LTESIWLLLKGEFGYHASALTYRFFMVIGSLLILTGILISYTPLANY--EVYTYLARLIP 65
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
E + + L+ L IS L A YF+++ ++R + A +
Sbjct: 66 EKAGEVMMR--LETLYRHRGTGSFISVLLAYYFAADLAGSMRTAFGYATGIKPKG----R 119
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ F L + L + + P + + P + L
Sbjct: 120 YISLFLITPLYLLLLSLFLSLLALFPAVMKLFLPWAP---------QLVLWPVKFMILTG 170
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + K +L +F+ + V LFT I+ + +YA + S++
Sbjct: 171 MIYVTYYIFLPVSVKPQHLLKASLFSAVLITVLNYLFTVVIIKLVHANPLYAVMGSVLVF 230
Query: 252 LVFLYMLGVFFILGAELNASMII 274
+V++ + V + GA L +
Sbjct: 231 MVWMEKVFVILLTGARLALAYQK 253
>gi|284042220|ref|YP_003392560.1| ribonuclease BN [Conexibacter woesei DSM 14684]
gi|283946441|gb|ADB49185.1| ribonuclease BN [Conexibacter woesei DSM 14684]
Length = 286
Score = 55.4 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/264 (10%), Positives = 72/264 (27%), Gaps = 24/264 (9%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+++ ++ V+ A + ++ P +V ++
Sbjct: 30 ELVRACLDRLVQMQFVDRAVALGSLTFTALVPLMVIANAYL-----PGADSAADSLIRRF 84
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
I E + + S + AL+ A+R+
Sbjct: 85 HLSGSTADIVRETFARPDTTRGAISVVGIALLIGSSLSFTRALQRVYENAWRLQARGW-- 142
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
SV + + A VR + L L + +
Sbjct: 143 -----------AGSVAGLKWLAGIIVWATLFAGVRSWIEDLTGPL-----VSLIVALGGG 186
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASI 248
+ +F L A + ++P + T + ++ Y+ + + + Y +
Sbjct: 187 AVLWLFTPWVLLAQRVDWHRLVPSAVLTSVGMTGLSIASVVYMPDSIAESADRYGSIGIA 246
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ + +L G + A + A +
Sbjct: 247 IALVSWLVGAGFVLVACAAVGAVL 270
>gi|195953003|ref|YP_002121293.1| ribonuclease BN [Hydrogenobaculum sp. Y04AAS1]
gi|195932615|gb|ACG57315.1| ribonuclease BN [Hydrogenobaculum sp. Y04AAS1]
Length = 258
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 38/255 (14%), Positives = 85/255 (33%), Gaps = 15/255 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + + F A +S S ++S+ P I+ + I +P
Sbjct: 4 LINFVLDFFRLKILYHAGALSFSFIMSIVPLILGAGFFLHMF-LENKIDNYIYHFSAVFP 62
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ K I D L I AL + YFS+ ++ L ++ + E + +
Sbjct: 63 DFTNKIIKDI--SYLEQKRLKAGIIGALVSLYFSTGFIKDLDYAIALMWDKKEAKRIEVM 120
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + ++ + F + L + + + +
Sbjct: 121 YFLYLMFFVVVFTGGSVYLFYISLM------------FKHLNLPLEFTKNLSYLLFFTVF 168
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+F+ + + + +L ++ ++ + T YI S +YA L I+
Sbjct: 169 FYSVYSIFIQSKNIRKIYVLAVSAVESLALLLLKYIITVYISHLLIKSIVYASLWLIIAF 228
Query: 252 LVFLYMLGVFFILGA 266
L+++ L +LGA
Sbjct: 229 LIWIDWLMASLLLGA 243
>gi|71894114|ref|YP_278222.1| hypothetical protein MS53_0090 [Mycoplasma synoviae 53]
Length = 369
Score = 55.4 bits (132), Expect = 9e-06, Method: Composition-based stats.
Identities = 49/282 (17%), Positives = 98/282 (34%), Gaps = 13/282 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGA--------NLAGFLGAHQFVPT 61
+I ++F ++ + + L+S P I N+AG A
Sbjct: 76 KVINRIFDNFNTKEYNFIWLSTAFLILISFIPVIYIVYFFNSVLTPNIAGLTPADFEELF 135
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ ++ P + + + + + A Y SS G L S N
Sbjct: 136 LSSILGKIIPGTDNTFLKLNARDIFNSADFSSIVGSFLLFVVAIYISSGGYARLITSSNY 195
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y ++ ++ R V + + L IMS + + + K + + ++I
Sbjct: 196 IYDHKKLGTYIGNRFKGLFVVFMVAFWLWIMSTIQI-LIEIGIMNNKEIDSDISKGILIQ 254
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T++ F ++ F+P+ SK +I G I I + + +F+ I S+Y
Sbjct: 255 FTFGVNTLIFFFGLTFGIYKFVPSFTSKFKNIYRGAIIATIPSSIMSYIFSS-INQNSSY 313
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ + + +F+ F LG N + Y +K
Sbjct: 314 GKFGSTVGFFLLVALFVNWFIYFVFLGFTFNEAYFKNYVARK 355
>gi|144574959|gb|AAZ43511.2| conserved hypothetical protein [Mycoplasma synoviae 53]
Length = 372
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 49/282 (17%), Positives = 98/282 (34%), Gaps = 13/282 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGA--------NLAGFLGAHQFVPT 61
+I ++F ++ + + L+S P I N+AG A
Sbjct: 79 KVINRIFDNFNTKEYNFIWLSTAFLILISFIPVIYIVYFFNSVLTPNIAGLTPADFEELF 138
Query: 62 VIDVVFGAWPEVIAKPITDEILQVLAV---PAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ ++ P + + + + + A Y SS G L S N
Sbjct: 139 LSSILGKIIPGTDNTFLKLNARDIFNSADFSSIVGSFLLFVVAIYISSGGYARLITSSNY 198
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIW 178
Y ++ ++ R V + + L IMS + + + K + + ++I
Sbjct: 199 IYDHKKLGTYIGNRFKGLFVVFMVAFWLWIMSTIQI-LIEIGIMNNKEIDSDISKGILIQ 257
Query: 179 NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTY 238
T++ F ++ F+P+ SK +I G I I + + +F+ I S+Y
Sbjct: 258 FTFGVNTLIFFFGLTFGIYKFVPSFTSKFKNIYRGAIIATIPSSIMSYIFSS-INQNSSY 316
Query: 239 STMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ + + +F+ F LG N + Y +K
Sbjct: 317 GKFGSTVGFFLLVALFVNWFIYFVFLGFTFNEAYFKNYVARK 358
>gi|46205048|ref|ZP_00209679.1| COG1295: Predicted membrane protein [Magnetospirillum
magnetotacticum MS-1]
Length = 157
Score = 55.0 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 28/59 (47%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFG 68
DI + F + +A+ ++ A+L++FP + ++ G + + T ++ + G
Sbjct: 98 DIALRLYQEFGNDRILLVAAGVTFYAILALFPAVAALVSIYGAVADPSTINTHLNELRG 156
>gi|323356582|ref|YP_004222978.1| hypothetical protein MTES_0134 [Microbacterium testaceum StLB037]
gi|323272953|dbj|BAJ73098.1| predicted membrane protein [Microbacterium testaceum StLB037]
Length = 354
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/287 (11%), Positives = 94/287 (32%), Gaps = 10/287 (3%)
Query: 1 MREYFCIVFDI-IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQ 57
+R + + A + G +A ++ L S+F ++ G + A G +
Sbjct: 5 IRRVTAWALSLRLVRAFLVYSGARGPILADSVTYRTLFSLFAAVLIGFSAAAVWLSGNPE 64
Query: 58 FVPTVIDVVFGAWPEVIA-KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL 116
+ + V P ++ + D I + + + +LR +L
Sbjct: 65 GLAALERSVNNVVPGLVGTDGLLDVSAIKAPTEFTIAGVIGTIGLLGAAIGAIGSLRAAL 124
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL----GN 172
+ V + + ++ V + ++ + + + A + +
Sbjct: 125 RQIAGVTTDDTLPVLVIVRNLAVAVGIGVALVGAALVTFLATAGLTFVRGLLGISADSWV 184
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
++ W ++ + L K++ ++ G + + VV L ++
Sbjct: 185 TAVLTWALSTIVVLVLDTAAVAVAFAALSGVKTRRRTLWRGALLGGVGLVVLQQLSGLFV 244
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL-GAELNASMIIYYWR 278
+ + AS++ L++L + ++ GA + + + R
Sbjct: 245 GGAGN-NPLLTTFASLIALLLWLNLSSQVILIAGAWITVATEEDHDR 290
>gi|271966850|ref|YP_003341046.1| membrane protein [Streptosporangium roseum DSM 43021]
gi|270510025|gb|ACZ88303.1| membrane protein-like protein [Streptosporangium roseum DSM 43021]
Length = 302
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 89/262 (33%), Gaps = 13/262 (4%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL-GAHQFVPTVIDV 65
D + A + + DG +++ ++ A ++F + ++ G + Q + TV
Sbjct: 22 RWLDHLVRAGARYDQADGGRLSAALTYYAFFALFALALLSFSIIGHVLDDPQVIRTVQRY 81
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE- 124
+ +P + + + D I+ + ++ LR ++ +R+ E
Sbjct: 82 LTDNFPRLDVQALRDA--------RSTAGVIAFIGLPITGLFWMDTLRSAIRAIWRIEEY 133
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL--LIIWNGRI 182
+ + +LI G + L V A L ++ + + ++
Sbjct: 134 PGRFLLRQLIDLGVLAGLGALLSASLAVAFAAESLLNWLLVHTVGVDDTPTQWLLAAVAF 193
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+ + + + P + +L +F + V + Y+ + + Y
Sbjct: 194 VLGLGVNTLLAVALLTAPPRLRLPPRRVLGPALFISLGLEVLKTIGQFYLE-ITAANPAY 252
Query: 243 AGLASIMTCLVFLYMLGVFFIL 264
+A + L FL +L +
Sbjct: 253 QVVAGAVALLAFLKLLNQLILF 274
>gi|309774723|ref|ZP_07669746.1| YihY family protein [Erysipelotrichaceae bacterium 3_1_53]
gi|308917496|gb|EFP63213.1| YihY family protein [Erysipelotrichaceae bacterium 3_1_53]
Length = 272
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 46/104 (44%)
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + + ++ L K + G +F+ I + A LF + F+
Sbjct: 145 LNEFLPIVSAVIMLLLFTMMYRALSFRKRNWSFGIIGAMFSTICILGLAALFVTIVSHFT 204
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +Y LAS++T L+ +Y++ LG LN Y R++
Sbjct: 205 SYKDVYGPLASLVTLLLAIYLISCIIYLGFCLNLICEEDYGREE 248
>gi|313898696|ref|ZP_07832231.1| YihY family protein [Clostridium sp. HGF2]
gi|312956580|gb|EFR38213.1| YihY family protein [Clostridium sp. HGF2]
Length = 272
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 46/104 (44%)
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFS 236
+ + + + + ++ L K + G +F+ I + A LF + F+
Sbjct: 145 LNEFLPIVSAVIMLLLFTMMYRALSFRKRNWSFGIIGAMFSTICILGLAALFVTIVSHFT 204
Query: 237 TYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+Y +Y LAS++T L+ +Y++ LG LN Y R++
Sbjct: 205 SYKDVYGPLASLVTLLLAIYLISCIIYLGFCLNLICEEDYGREE 248
>gi|296444775|ref|ZP_06886738.1| ribonuclease BN [Methylosinus trichosporium OB3b]
gi|296257723|gb|EFH04787.1| ribonuclease BN [Methylosinus trichosporium OB3b]
Length = 105
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 27/58 (46%)
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
A + Y + ++ Y L +++ ++++++ + ++GAEL+ M +
Sbjct: 41 AIAAGVSFYALLAIFFNETYGALGAVIALMLWMWVSTIVLLVGAELDVEMERRRAGAR 98
>gi|302865267|ref|YP_003833904.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|315501811|ref|YP_004080698.1| ribonuclease bn [Micromonospora sp. L5]
gi|302568126|gb|ADL44328.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|315408430|gb|ADU06547.1| ribonuclease BN [Micromonospora sp. L5]
Length = 313
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/267 (15%), Positives = 100/267 (37%), Gaps = 17/267 (6%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
VFD ++ A + + +A+ I+ +VF + + G + +
Sbjct: 24 VFDHVWRAGTLYADLLAGRLAAAIAYYGFFAVFALALVAYWIFGAVLRDNEEVSRGAAHF 83
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYR-VVE 124
+ P + I + + + + + + VEA+R S Y +
Sbjct: 84 LEENLPFLDPVQIAE--------SSSTVGVVGLVILVFTGIGWVEAIRSSQRLMYGFNQQ 135
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ + RL+ G ++ V L + A+ L ++ + ++G +
Sbjct: 136 PGNLVVRRLVDLGVLVAVFVLLFVSVAAVDALESLLRFLLRSTGSVG-----LTTISALL 190
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
++L + + L +P + + P ++ + + + +Y+V + + Y
Sbjct: 191 SVLVNAVLAAALLLAVPRLRMSRRRLRPAILTIAVGITLLNTVGRYYVVR-TERNPAYTV 249
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
+A+ + L++LY+L + GA L A+
Sbjct: 250 VATAVGLLLYLYLLNQLVLFGAALAAT 276
>gi|262367623|gb|ACY64180.1| membrane protein [Yersinia pestis D182038]
Length = 170
Score = 52.7 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 47/130 (36%), Gaps = 1/130 (0%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
++ + + A ++ L + + ++ A ++ +++ LP
Sbjct: 1 MALIITLSLTSIAGAAQAAIVNALGLGSIEWLRPAMTLIALSISIAANYLLFLWIFWILP 60
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
K K ++L G + I + V + T + ++ S A S++ + F Y
Sbjct: 61 RNKPKKKALLRGALIAAIGFEVIKFIMTMMLPRLAS-SPSGAAFGSVIGLMAFFYFFARL 119
Query: 262 FILGAELNAS 271
+ A A+
Sbjct: 120 TLFCAAWIAT 129
>gi|262201112|ref|YP_003272320.1| hypothetical protein Gbro_1119 [Gordonia bronchialis DSM 43247]
gi|262084459|gb|ACY20427.1| hypothetical protein Gbro_1119 [Gordonia bronchialis DSM 43247]
Length = 325
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 75/264 (28%), Gaps = 20/264 (7%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ + + A ++ A + P ++ L G + +
Sbjct: 46 LLIRILGDIARGNITDRAMTLAAQAFTGILPIVILLTTLPGSSVIDTSLAKL-------- 97
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
I D + I AL +++ AL ++V
Sbjct: 98 --GIHGGNVDFLSSADTTTVGTFGLIGALMTIAGATSLSRALGRMYVSIWQV-------- 147
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYATMLAL 189
T+L G+ V I V V F + ++ G I T L
Sbjct: 148 TKLPLKGWWRWVVVIFTIPVAVTVQGMSTDLSSNTIFGVHIDDSGLLGIGLVIVVTFLIW 207
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF-STYSTMYAGLASI 248
I V L +A+ + + T V V + + + Y L +
Sbjct: 208 TITWTLVPRLLVSAQVPLRLLTLNGAVTGALITVLMVGSRVVMPRIMNNTTQHYGTLGVV 267
Query: 249 MTCLVFLYMLGVFFILGAELNASM 272
+ +L++ ++ A + ++
Sbjct: 268 FIAISWLFIFAGILVVTALVTNAV 291
>gi|237734846|ref|ZP_04565327.1| predicted protein [Mollicutes bacterium D7]
gi|229382174|gb|EEO32265.1| predicted protein [Coprobacillus sp. D7]
Length = 292
Score = 52.7 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/234 (15%), Positives = 80/234 (34%), Gaps = 15/234 (6%)
Query: 32 SLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAK 91
+ ++S+ P A A L + T+ ++ + I I + +
Sbjct: 35 AYYLIMSIIPICSLFAFFASILNVD--LGTLEQLLKNYLTPEFSNII---IASLKSSHIT 89
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
I + + S G+ L + R+ I +L+ + V L+++
Sbjct: 90 LSSIIILFISLFVVSRGINQLYGISKNLFPSAHQRNIIIEQLLMLLKTIAVFVLLLLIIS 149
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ IPL ++ I L FI L ++ +P I I+
Sbjct: 150 ILTIIPLINYFINFKD---------ILVLGDLYLFLVFFIILFLLYKIIPDVHVHIFDIV 200
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
G + I ++ Y + Y+++Y LAS++ ++ ++ +G
Sbjct: 201 KGAFCSSILMLILLSALEFYFS-IADYTSVYGPLASVVVIMISFSLIAETIFIG 253
>gi|288817646|ref|YP_003431993.1| ribonuclease BN [Hydrogenobacter thermophilus TK-6]
gi|288787045|dbj|BAI68792.1| ribonuclease BN [Hydrogenobacter thermophilus TK-6]
gi|308751244|gb|ADO44727.1| ribonuclease BN [Hydrogenobacter thermophilus TK-6]
Length = 256
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/242 (16%), Positives = 92/242 (38%), Gaps = 16/242 (6%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
AS ++ S ++ + I+F + LA FL F +I+ +PE + I + +
Sbjct: 21 TYHASSLTYSFIMVLGSLILFSSFLASFLPFFDF-NKIINYAVLLFPEQAERVILEILKV 79
Query: 85 VLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
+ + S A +FS + ++L + ++ + + VLL ++
Sbjct: 80 YQHRTSGSIL--SFTVAYFFSVSFSKSLYRAFLYVLSEARSEKEWVFWVKTPALVLLYTL 137
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
L ++ F+ + + L + NLL + T+ K
Sbjct: 138 CLSLLFFLNSFLKVYLGNYNAYLFYFINLLTFWVLIFLTYTLFL-------------PRK 184
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ G + + + ++ LF+ ++V + +Y+ + SI+ +++ + +
Sbjct: 185 YSFKDVYVGAMLSSCALLLFNKLFSAFVVKLVALNPLYSFMGSILIFFIWVNLSFSVLLA 244
Query: 265 GA 266
GA
Sbjct: 245 GA 246
>gi|207092956|ref|ZP_03240743.1| putative ribonuclease N [Helicobacter pylori HPKX_438_AG0C1]
Length = 236
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 6/166 (3%)
Query: 100 AAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
+ + S+ + R + + TLV + + + +
Sbjct: 50 VSIVVALVLFCENYRSIASKIFQAKPRDYAHFKGKEIFLFWGFGTTLVFLFALPLVVFFD 109
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
+ F +LL ++ YA L LF + V FT +
Sbjct: 110 IKIQVFFEDKDSSLLHVLRWIGTYAFFLILFTIPT------NKVFKHYFWVFLWVFFTSV 163
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
SW V FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 164 SWHVLKWAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 209
>gi|297196140|ref|ZP_06913538.1| ribonuclease BN [Streptomyces pristinaespiralis ATCC 25486]
gi|197719449|gb|EDY63357.1| ribonuclease BN [Streptomyces pristinaespiralis ATCC 25486]
Length = 288
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/267 (12%), Positives = 64/267 (23%), Gaps = 30/267 (11%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
D + ++ +LL FPF++ A G + G
Sbjct: 50 LWSRLSALDFLGNSFQLAALSLLCFFPFLIVLAAAVG--------RDAATTLAGWLGLSR 101
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
L P L + L+ R + V + +
Sbjct: 102 QAAQAVASLFPEGEPPGSLTVAGVAMLLLGAVAVAGILQSWYQRLFDVPSRGWRDLPSQL 161
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ +LLA ++ + P + R +
Sbjct: 162 CWLALLLAYGAAQALAGGSLDAPAS---------------------RGLFGLATATCFWW 200
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMTCLV 253
S+LP + T + W + Y S Y + +M +
Sbjct: 201 ATMYVFLVPAVSWRSLLPSAVVTAVCWTGLGLFSARYFSAAIVANSEKYGPIGVVMIIMS 260
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
+L +GV LG + +
Sbjct: 261 WLVAVGVVIHLGVVVGRMYQERRSAAR 287
>gi|322689548|ref|YP_004209282.1| hypothetical protein BLIF_1365 [Bifidobacterium longum subsp.
infantis 157F]
gi|320460884|dbj|BAJ71504.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 227
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 80/222 (36%), Gaps = 4/222 (1%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
+G + +ID V P V +T L ++ + + + + +L
Sbjct: 2 VGNIDWQQMLIDAVREVIPGVADSFLTSSALGTMSSALTWTGLATLAIFWWTVTGWMNSL 61
Query: 113 RISLNRAYRVV-EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
R ++ + + + + RL + ++ ++ + + + ++
Sbjct: 62 RHAVRAMFDDCGDELNIVVARLRDTLAAIAIAILFILSTVAGTVSGGIVRRLLQWGGIPS 121
Query: 172 NLLL--IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ L ++ + T +AL L + L + + + G + ++ +L
Sbjct: 122 SSLPGTVLLEMTGFGTGVALNFALFILLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGA 181
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ ++ + M A A+++ L++ ++ +L A L A
Sbjct: 182 RLLAG-ASRNPMLAPFAALIGVLIWFNLVAQVILLCAALIAE 222
>gi|313139409|ref|ZP_07801602.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
gi|313131919|gb|EFR49536.1| conserved hypothetical protein [Bifidobacterium bifidum NCIMB
41171]
Length = 249
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/223 (12%), Positives = 75/223 (33%), Gaps = 2/223 (0%)
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
G+ + T++ ++ P V + +L ++ ++ + + + +LR
Sbjct: 11 GSEEMQKTLLAMLRTVIPSVSDSLFSASMLSGISHTLTWTGLVTLAVFWWTVTGWMNSLR 70
Query: 114 ISLNRAYRVVEMRSWYI--TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
++ + + + +++A + ++ + V+ L +R A
Sbjct: 71 NAVTTMFDDCTQELNVVKARLRDTVAAIMVAVLFILSTAAGVVSGGLMRLVLRALGIADD 130
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+L + L +F+ L A + V L
Sbjct: 131 SLPGALLLESTGFATGVLLNFALFMLLLRVVAHIRAGKFTLVGAALGALAVAVMQLLGAR 190
Query: 232 IVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMII 274
++T ++ + M A A+I+ L++ ++ ++ A A
Sbjct: 191 LLTGASRNPMLAPFAAIIGVLIWFNLVAQVIMICAAFIAECRR 233
>gi|223986764|ref|ZP_03636749.1| hypothetical protein HOLDEFILI_04072 [Holdemania filiformis DSM
12042]
gi|223961285|gb|EEF65812.1| hypothetical protein HOLDEFILI_04072 [Holdemania filiformis DSM
12042]
Length = 268
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/221 (15%), Positives = 75/221 (33%), Gaps = 24/221 (10%)
Query: 49 LAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG 108
+ F + + +++D P+ + P D L + + + + +S
Sbjct: 40 VVFFRSSPAGLASILDFAEQYIPQDLLSPFIDFFLG-NSPVELIPLIFFIVVSLWVASRA 98
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ + + V + + VLLAS+ L++ L +
Sbjct: 99 IYSFLMISAHLDEVELPLWFMRGVSLIDFVVLLASLGLMVFVLQQFPFTGLLTQI----- 153
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLF 228
LF+G + L + ++ PG +FT I + F
Sbjct: 154 ------------------AVLFVGFCIFYRLLSFRNYQWRAVAPGALFTTICMSLLGTFF 195
Query: 229 THYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
I F+ Y ++Y L+S++ + +Y++ LG +N
Sbjct: 196 FFVINHFTRYESIYGPLSSMVILFLSVYIIASIIYLGFCVN 236
>gi|53690304|ref|ZP_00121873.2| COG1295: Predicted membrane protein [Bifidobacterium longum DJO10A]
Length = 234
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/222 (12%), Positives = 80/222 (36%), Gaps = 4/222 (1%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
+G + +ID V P V +T L ++ + + + + +L
Sbjct: 9 VGNIDWQQMLIDAVREVIPGVADSFLTSSALGTMSSALTWTGLATLAIFWWTVTGWMNSL 68
Query: 113 RISLNRAYRVV-EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
R ++ + + + + RL + ++ ++ + + + ++
Sbjct: 69 RHAVRAMFDDCGDELNIVVARLRDTLAAIAIAILFILSTAAGTVSGGIVRRLLQWGGIPS 128
Query: 172 NLLL--IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ L ++ + T +AL L + L + + + G + ++ +L
Sbjct: 129 SSLPGTVLLEMTGFGTGVALNFALFMLLLRVVSHIKAGRFTILGALLGSLTVSAMQLLGA 188
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ ++ + M A A+++ L++ ++ +L A L A
Sbjct: 189 RLLAG-ASRNPMLAPFAALIGVLIWFNLVAQVILLCAALIAE 229
>gi|218461679|ref|ZP_03501770.1| putative ribonuclease protein [Rhizobium etli Kim 5]
Length = 88
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 45/60 (75%)
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
W+ GA++F +Y+ TF+ Y+ YAGLAS+M L+FLYM+G FI+GAE+NA++I + +
Sbjct: 1 LWLAGALIFAYYLATFANYTATYAGLASVMIVLIFLYMVGAIFIIGAEINAALIKFRVFR 60
>gi|297521106|ref|ZP_06939492.1| conserved inner membrane protein [Escherichia coli OP50]
Length = 135
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 2/86 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
V + A E F + G + I+ + LS+ P ++ GF+ + + D
Sbjct: 50 VIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPMLLQDIFDK 109
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAK 91
+ + +
Sbjct: 110 ILQNISDPTLAATLKNTINTAVQQRT 135
>gi|330723864|gb|AEC46234.1| hypothetical protein SRH_03470 [Mycoplasma hyorhinis MCLD]
Length = 342
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/215 (15%), Positives = 72/215 (33%), Gaps = 2/215 (0%)
Query: 65 VVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVE 124
++ P + + + A++ + S NG L S + Y
Sbjct: 114 ILNRFIPGIKTALPDFLVTFKDTNWSNIGILFLAISTLWISINGYSKLMASQSTIYNHKN 173
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
SW +L + V+ + + + I + L ++ ++ + + +
Sbjct: 174 KGSWIYGKLKALFIVIAIVIFVSFSLIIITPIMMYLKQALINSESVYDV--LFYIISSFY 231
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ G + + +LP + K I+PG I +S ++F + + Y
Sbjct: 232 LIFFFTSGWLLMFKWLPVFQLKFKDIVPGWIIASLSSAFFTIIFGYLVSNKYIKYEKYGS 291
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+AS + F + FF +N S + K
Sbjct: 292 MASFLYLSTFSLYISYFFYFALTINYSYAQVFSTK 326
>gi|324997681|ref|ZP_08118793.1| integral membrane protein [Pseudonocardia sp. P1]
Length = 292
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 74/261 (28%), Gaps = 24/261 (9%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ FV G+ A ++ A +++ P + + Q +
Sbjct: 15 RLVVRFVAASGYDRALALAAQAFVALVPAALLTLA---YFPVDQGAAVTYLIDRFGLTGD 71
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A+ + + + + G L + R+ +
Sbjct: 72 GAEAVRELVARPRQAGTPGAVGGVVLVVM-----------------TGIGFTRTLQRLYV 114
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
++ L + VA+ A+ F P+ + + L +
Sbjct: 115 SAWVLSPLGLRGFLHALLAVVALVAAVLAAVVFAPSDEGPHPV---AALAVQALIAAVLW 171
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCL 252
+ + L + + +LPG + T + + +L Y+ + + L +
Sbjct: 172 LPIQRLLVGDRVTLRRLLPGAVVTGVGQTLATLLSGPYLRLAVGEQADRFGVLGVAFVLV 231
Query: 253 VFLYMLGVFFILGAELNASMI 273
+L +L + A A +
Sbjct: 232 SWLLVLAYLLVGAAVFGAELA 252
>gi|86741435|ref|YP_481835.1| ribonuclease BN [Frankia sp. CcI3]
gi|86568297|gb|ABD12106.1| ribonuclease BN [Frankia sp. CcI3]
Length = 320
Score = 50.0 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/256 (14%), Positives = 70/256 (27%), Gaps = 21/256 (8%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D E D A +++ L+ FPF++ A L+ Q I +
Sbjct: 53 DLASRLREADLINRAMNLAAMILMIFFPFVITLAALSPL---RQGGAADIIIARMGLSHD 109
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + G + L + +++ R +R+ +
Sbjct: 110 AAMAVERLFTPRSGTVLTGWTVLGVLWLIIGGLSLAASVQSIYVRVFRLKPFGLRGLLAQ 169
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + L+ + + +A + L + L
Sbjct: 170 VGWLCGLIFFLVATTSLGALLTGTVAGQVCYG-----------------LVATVILALFL 212
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH-YIVTFSTYSTMYAGLASIMTCL 252
L + P +FT I V+ + + Y G+ + T L
Sbjct: 213 WVGVRVLTIGRMSWRDSWPTALFTTIGLTGLGVVSRLAFSASIVANERSYGGIGVVFTIL 272
Query: 253 VFLYMLGVFFILGAEL 268
+L GV I G +
Sbjct: 273 SWLIGFGVVLIGGVIV 288
>gi|284993218|ref|YP_003411773.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
gi|284066464|gb|ADB77402.1| ribonuclease BN [Geodermatophilus obscurus DSM 43160]
Length = 245
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/243 (17%), Positives = 88/243 (36%), Gaps = 15/243 (6%)
Query: 39 VFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA 98
+ P ++ +L L + + V + D + P + L+ LA GL +
Sbjct: 1 MVPLLLVAFSLTALLTSAERVRELSDRLAQLLPPELGA---PGALRTLAEAGTGLDLLGF 57
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ A S E LR +L R + + + RL++ VL + + + A+
Sbjct: 58 VLALVPLSFYGEGLRRALLRFTPRQDRLTGWRGRLLALPLVLATPLLMYPLLLAASAMVD 117
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
L Y+ + AL + L++ + A + +++ GV+FT
Sbjct: 118 LTE---------QGSALGTVAVGYYSVLFALTVPLLWGFGVVAAGDLRWPALVSGVLFTA 168
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGL---ASIMTCLVFLYMLGVFFILGAELNASMIIY 275
F ++ + GL +++ ++L++L + I G L S+
Sbjct: 169 ACLSGFLQGFAIFLALPLALGAPFGGLTVVGAVVAISLWLFLLHLVVIAGWLLTQSLDGR 228
Query: 276 YWR 278
R
Sbjct: 229 LRR 231
>gi|269218781|ref|ZP_06162635.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211892|gb|EEZ78232.1| conserved hypothetical protein [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 343
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 80/281 (28%), Gaps = 34/281 (12%)
Query: 1 MREYFCIVFDI----IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--- 53
MR + + + + G +A I+ SAL ++ + L
Sbjct: 6 MRNWKIWLGRFKELRVTRGFVRYGTARGGVLAGGIAYSALFALTAAMTIAWTAFMALMGS 65
Query: 54 ---GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVE 110
+ V+ G I D VL ++ L + +++ V
Sbjct: 66 DSRLRADVLRGFDRVLPGILKTGDGGGIVDPDSLVLKSAVTPASVLAGLVLLFTATSVVA 125
Query: 111 ALRISLNRAYR-VVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPA 169
+ S+ + V RL S G ++ ++ + S + V L
Sbjct: 126 NVGKSVQAMFGIVSLHIGLAARRLRSLGGFVVLALGVGASSVLTVFGGLGA--------- 176
Query: 170 LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ + F+ + + +L G + +
Sbjct: 177 -------------LVSFAVDVGVVAFIFRVVAGVRMPRRDLLLGATSAAAGTTILRLCEK 223
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNA 270
I + S + + A ++ L+ L + ++ A + A
Sbjct: 224 SLIGSVSD-NALLASFTAVAALLLGLNLASRILLVCAAIAA 263
>gi|168705549|ref|ZP_02737826.1| ribonuclease BN [Gemmata obscuriglobus UQM 2246]
Length = 168
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 61/162 (37%), Gaps = 8/162 (4%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFV 59
M+ V+ ++ D+ F+++ +++ ++ LS+ P ++ +AG G
Sbjct: 1 MKMKPQDVWALLKDSATKFIDDKAMRLSAALAYYTTLSLSPLLLAVVAIAGLAYGPEAAR 60
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL-FTISALAAAYFSSNGVEALRISLNR 118
++ A + I++ + + ++ + +S ++ +LN
Sbjct: 61 GEIVAQFRDTIGVEAASFVEQLIIKSSSKSDGIVAAIVAGGVLLFGASGVFSDMQSALNT 120
Query: 119 AYRVVEMR------SWYITRLISFGYVLLASVTLVIMSFVFV 154
++V S RL+SF V A+ L+ V
Sbjct: 121 IWKVPGHEVKGGILSIVKDRLLSFSLVCGAAFLLLTSLVVTA 162
>gi|289811679|ref|ZP_06542308.1| hypothetical protein Salmonellaentericaenterica_48167 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 107
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 1 MREYFC-IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL 53
M++ + + A E F + G + I+ + LS+ P ++ AGF+
Sbjct: 47 MQKIQRQPMVAHLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFI 100
>gi|309803296|ref|ZP_07697393.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
gi|308164804|gb|EFO67054.1| conserved hypothetical protein [Lactobacillus iners LactinV 11V1-d]
Length = 158
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 56/140 (40%), Gaps = 2/140 (1%)
Query: 19 FVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPI 78
+ + I+ L S+FP I+ N+ L + ++ + +PE IA+ I
Sbjct: 21 MTRGEIGQTSIIIAYYILFSIFPVIMIVGNMLPLLQIN--TSSIATYLNVIFPEQIAQFI 78
Query: 79 TDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGY 138
+ +L + G ++ + A + S V ++RI++N+ Y V E
Sbjct: 79 LPIVKSLLHQQSNGSISLGIIFALWSFSGLVNSIRIAMNKIYGVYEQEKTCPWWYYFVTR 138
Query: 139 VLLASVTLVIMSFVFVAIPL 158
L+ +++ ++ +
Sbjct: 139 TLMLLLSIFMIYIFYWRFLW 158
>gi|300785969|ref|YP_003766260.1| ribonuclease BN [Amycolatopsis mediterranei U32]
gi|299795483|gb|ADJ45858.1| ribonuclease BN [Amycolatopsis mediterranei U32]
Length = 312
Score = 49.3 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 40/238 (16%), Positives = 69/238 (28%), Gaps = 9/238 (3%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW 70
++ DA D A+ ++ A+L+V P + A FLG+ FV + A
Sbjct: 34 VLRDAGRELRGRDLSLWAAGVTFFAVLAVVPLALVALRGAAFLGSPAFVRDGVSRWADAL 93
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYI 130
P L+ LA A G + L ++ E L L +
Sbjct: 94 PPGHGS---GPALEALATAALGTPWTALLVTLLPATFYGEGLLRGLVQVAGQPAGALVGW 150
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ F VL+ S TL I L + + L +
Sbjct: 151 RGRLMFVPVLVLSPTLAIAPLATADPVAGLYTRGGWATF------WGITLSFHIDWLIIA 204
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
V + ++ G F ++ +S + GL ++
Sbjct: 205 AVTAIVFAGSAPRGVRRGPLVAGAFAVAAVLAGFFHGFLLFLAIPLDWSVPFGGLTAV 262
>gi|302555876|ref|ZP_07308218.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
gi|302473494|gb|EFL36587.1| integral membrane protein [Streptomyces viridochromogenes DSM
40736]
Length = 271
Score = 48.9 bits (115), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 79/259 (30%), Gaps = 27/259 (10%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ A+ ++ AL+++ P ++ A + + + G + + +I
Sbjct: 35 ELLHRATGFAMLALVTLAPLLIVVAAADPL----ERGGFALWLADGMGLSGRSARLLTDI 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + +A A F +++ R + + + R + + A
Sbjct: 91 ISPPRKVIGTTSVLGGVALAVFGIALGGSVQNGYERIWGLSAGPWHRVWRQAVWMIAMTA 150
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + + V P RI + + + + FL
Sbjct: 151 YLYQEVQTRSLVTGPE----------------------RIALSSASGVLFFWWGQRFLLG 188
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLASIMTCLVFLYMLGVF 261
+ + +LPG T + V + + Y + ++ +L +G
Sbjct: 189 GQVRWSDLLPGAAATMLGLVGLRTFSHFVFTPLIVTNAISYGAVGVVLVVESWLIGVGYV 248
Query: 262 FILGAELNASMIIYYWRKK 280
GA ++ ++ ++
Sbjct: 249 VYGGALFGHWLLAHHGLRR 267
>gi|255027456|ref|ZP_05299442.1| hypothetical protein LmonocytFSL_15893 [Listeria monocytogenes
FSL J2-003]
Length = 92
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ + D A+ ++ L S+FP ++ A L +L + +V +++
Sbjct: 14 IVQVGQAVSARVGRNDVSGNAAQLAYYMLFSIFPMLLIAATLLAYLHIDK--DSVFNMIK 71
Query: 68 GAWPEVIAKPITDEILQVLAV 88
P+ I + + + +L
Sbjct: 72 EFAPDQIMDFLEENLNNLLTQ 92
>gi|329935790|ref|ZP_08285594.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329304781|gb|EGG48655.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 261
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 77/258 (29%), Gaps = 27/258 (10%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + + + A + AL+++ P ++ A + + +V G
Sbjct: 13 LGELYRRAKDLELLHRAMGFATLALVTLAPLLIVVAAADPL----RHEGFALWLVDGMGL 68
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ D + + + A F + +++ R + + +
Sbjct: 69 SGRSAEAVDRVFSPPSRVVGTTSLWGGVLLAVFGLSFAASVQNGYERIWGLSSGPWHRVW 128
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R + + L+A + L + S + + RI + +
Sbjct: 129 RQLVWLVALMAYLYLQVQSRTVLDG----------------------SYRIALSAGTGLL 166
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL-FTHYIVTFSTYSTMYAGLASIMT 250
+ FL + + +LPG + T V F + T + Y + +++
Sbjct: 167 FFWWGPRFLLGHQVRWRELLPGALVTVACLAGLRVFSFLVFTPLVVTNALSYGAVGTVLV 226
Query: 251 CLVFLYMLGVFFILGAEL 268
+ +G GA
Sbjct: 227 VESWFAGVGFVVYGGALF 244
>gi|288917750|ref|ZP_06412112.1| hypothetical protein FrEUN1fDRAFT_1807 [Frankia sp. EUN1f]
gi|288350806|gb|EFC85021.1| hypothetical protein FrEUN1fDRAFT_1807 [Frankia sp. EUN1f]
Length = 280
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 33/262 (12%), Positives = 71/262 (27%), Gaps = 21/262 (8%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
D + D A +++ L+ FPF++ A + + +
Sbjct: 8 DLVSRLRAADLINGAMNLAALILMMFFPFVIALAAASPLGAGGAADIVIRRM---GLNHD 64
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + G + L + ++++ R +R+ +
Sbjct: 65 AAMAVERLFTPRGGTTVSGWSVLGVLWLVLGGVSLAASIQVVYERVFRLSPAGLRGLRNQ 124
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + LL + + G A ++ + L
Sbjct: 125 VVWLTGLLVFLAGSTALGSVLTRTTVGQA-----------------GYALAVVVMTALFL 167
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH-YIVTFSTYSTMYAGLASIMTCL 252
L + + P FT I + T + + Y + + T L
Sbjct: 168 WAGARVLTMGRLSWRAAWPVAFFTTIGLTGLGGFSRLTFSATIVSNESTYGPIGVVFTIL 227
Query: 253 VFLYMLGVFFILGAELNASMII 274
+L GV I GA + + +
Sbjct: 228 SWLIGFGVVMIGGAVVGSWYVE 249
>gi|126658679|ref|ZP_01729825.1| hypothetical protein CY0110_30446 [Cyanothece sp. CCY0110]
gi|126620116|gb|EAZ90839.1| hypothetical protein CY0110_30446 [Cyanothece sp. CCY0110]
Length = 129
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 5 FCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF-LGAHQFVPTVI 63
F I+ ++ + + + +D ++A+ ++ +S+ P ++ ++AG G ++
Sbjct: 3 FRILIKLLKETFQEWQGDDASSLAAALAYYTSVSLAPLLIIVISIAGAVFGEEAARGEIV 62
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVP-AKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
+ G A+ I I + IS + + +S L+ SLN+ + V
Sbjct: 63 SQIQGLVGRNGAELIETAIENANQPQISNFASIISIIILLFGASGVFAQLQKSLNKVWEV 122
>gi|171463569|ref|YP_001797682.1| putative ribonuclease BN [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193107|gb|ACB44068.1| putative ribonuclease BN [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 134
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 39/109 (35%)
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
+ + A + + V+ LP AK G + +++ +
Sbjct: 17 GWISVVSFGFQLVATIAPICLAVVVYAVVYKVLPYAKILWCDAFTGALAPALAFELMKFG 76
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYY 276
F ++ + Y +Y A L+++YM ++GA L A++
Sbjct: 77 FAIFLSHTAFYKMVYGAFAIFPLGLMWIYMTWWITLIGAVLVANLPDIR 125
>gi|222874667|gb|EEF11798.1| predicted protein [Populus trichocarpa]
Length = 78
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYML 258
LP A+ ++ G + T + + VG L Y+ + S+ Y S++ ++++Y
Sbjct: 1 MLPNARIAWRDVMMGSVITALLFAVGKRLIGLYLGNSAVASS-YGAAGSVVALMLWIYYS 59
Query: 259 GVFFILGAELNASMIIYYW 277
F GAEL + +
Sbjct: 60 AQIFFFGAELTRQYALQFG 78
>gi|327398727|ref|YP_004339596.1| ribonuclease BN [Hippea maritima DSM 10411]
gi|327181356|gb|AEA33537.1| ribonuclease BN [Hippea maritima DSM 10411]
Length = 254
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 32/261 (12%), Positives = 84/261 (32%), Gaps = 14/261 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I +A+ + E ++ ++ +L++ PF+ F + L
Sbjct: 6 IKEALRIYKERQVLLWSAFLTYLTVLNIVPFVYFSIFVLSHLPFVSKKIPYFKGAIINIV 65
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ ++ L A S + + + V ++ V + + + T
Sbjct: 66 PAYSAKVSLYFDTFLKSIASMELLNSIIFSL-SMMSLVLGFFKAIRYILGVEKKINIFKT 124
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ V + I + + IP+ + + F+
Sbjct: 125 FGFVLLSIIAVGVIITIAVALRIVIPVFMPKIAD------------AVYVRLLPFFIWFV 172
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
L + + K ++++ T + + Y F +YS +Y +A + +
Sbjct: 173 FLFALFYITKPRELKFLNVIVASFVTTVGVFLLKAALAAYFSIF-SYSKIYGAVAIVPSL 231
Query: 252 LVFLYMLGVFFILGAELNASM 272
L++L++L + G + +
Sbjct: 232 LLWLFLLWNVILFGVVVAKVI 252
>gi|297195883|ref|ZP_06913281.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297152979|gb|EFH32078.1| integral membrane protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 282
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/234 (11%), Positives = 71/234 (30%), Gaps = 23/234 (9%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ A + L++ P ++ A G Q + G + + +
Sbjct: 23 ELMHRAMGFAALGFLTLVPLLIVVAATDPASG--QGFARWMSQALGLAESSQDEV--ERL 78
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + A A F A++ + + + + R + R + + +L+
Sbjct: 79 FGLPRQALQRTTAFGLAALAVFGLTFGSAVQTTYEKVWDLPAARWHTMWRHVVWLGMLIV 138
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ + + + + L+LA + + L
Sbjct: 139 YLMIFVSTPLPGESVLSLA------------------IGAIGDLAGTVLFFWASQRVLLC 180
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVFL 255
+ + ++LPG + T I+ + V ++ + Y +++ +L
Sbjct: 181 GRVRWRALLPGAVATAIALLGLRVFSQLVFSPLIASNAVTYGPFGTVLVVQSWL 234
>gi|289444249|ref|ZP_06433993.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289417168|gb|EFD14408.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
Length = 172
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 59/161 (36%), Gaps = 8/161 (4%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPF-------IVFGANLAGFLG 54
+ + ++ I + ++ ++ ++ + + LS+ P + + A L G
Sbjct: 7 KPHRHHIWRITRRTLSKSWDDSIFSESAQAAFWSALSLPPLLLGMLGSLAYVAPLFGPDT 66
Query: 55 AHQFVPTVIDVVFGAW-PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
+ + + P V+ + I I + + ++ L + + S+ + A
Sbjct: 67 LPAIEKSALSTAHSFFSPSVVNEIIEPTIGDITNNARGEVASLGFLISLWAGSSAISAFV 126
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV 154
++ A+ +R R + ++ V LV + V V
Sbjct: 127 DAVVEAHDQTPLRHPVRQRFFALFLYVVMLVFLVATAPVMV 167
>gi|289620677|emb|CBI52808.1| unnamed protein product [Sordaria macrospora]
Length = 2377
Score = 47.7 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/219 (11%), Positives = 63/219 (28%), Gaps = 10/219 (4%)
Query: 40 FPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL 99
P + + A G Q + + VP + T+
Sbjct: 2070 VPIMTWIFRAAIIQGIQQVYILALWYWGSFLTGQTPTGTPHGLWIANKVPVVLVITVPIA 2129
Query: 100 AAAYFSSNGVEALRISLNRAYRVVEM-RSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ S GV + + ++ + S+Y + + + ++ F+
Sbjct: 2130 LILW--SLGVISFIGLPDYYRQLPDKIPSFYKSLMRRHIVPWFLLMVVIQNYFLSAPYGR 2187
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
++ G +L++ G L + P + +I G W
Sbjct: 2188 TWEFLFYSRAVPGWAILLLAIGFFVGLWCLLLWLFAYFTKTHPWI-VPLFAIGLGAP-RW 2245
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+ Y+ + A L +I++ ++L++
Sbjct: 2246 AQMLWATSGIGLYLPWCGS-----AALGAIISRCLWLWL 2279
>gi|111224781|ref|YP_715575.1| putative integral membrane protein [Frankia alni ACN14a]
gi|111152313|emb|CAJ64046.1| Putative integral membrane protein [Frankia alni ACN14a]
Length = 280
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 36/255 (14%), Positives = 72/255 (28%), Gaps = 18/255 (7%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVI 74
E D A ++ L+ FPF++ A ++ + +
Sbjct: 19 LARQLRESDLINGAMTLAALILMLFFPFLITLAAVSPLRPGGAAEIIIRRM---GLNHDA 75
Query: 75 AKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLI 134
A + + L A + + G+ + RV + ++ + +
Sbjct: 76 AMAVERLFTPHGGGGGSAQSEWTVLGALWLTLGGLSLAGAVQSVYLRVFRIPAFGLRGVP 135
Query: 135 SFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L + + + A+ A + + A+ + L
Sbjct: 136 AQVVWLAGLIVFLAGTTATGAVLTGTAVGQVCQG--------------LIVVAAMGLLLW 181
Query: 195 FVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLV 253
L + ILP +FT I V+ + Y + I T L
Sbjct: 182 SGTWILVRGRLGWREILPTAVFTTIGLTGLGVVSRLLFSESIVENERNYGEIGVIFTFLS 241
Query: 254 FLYMLGVFFILGAEL 268
+L GV GA +
Sbjct: 242 WLIGFGVVLTGGAIV 256
>gi|90417467|ref|ZP_01225390.1| probable ribonuclease [marine gamma proteobacterium HTCC2207]
gi|90330708|gb|EAS45987.1| probable ribonuclease [marine gamma proteobacterium HTCC2207]
Length = 93
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 9/83 (10%), Positives = 27/83 (32%), Gaps = 3/83 (3%)
Query: 2 REYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPT 61
I + A+ F+ + A+ ++ +L ++ P ++ ++ + A
Sbjct: 13 PRQLAISCQFLVYALRRFLGDGCPQSAAALTYMSLFAIVPMLILMYSMFSLVPAF---QE 69
Query: 62 VIDVVFGAWPEVIAKPITDEILQ 84
+ V + +L
Sbjct: 70 LGGQVEEFISPNSYSAVVRRLLS 92
>gi|76799896|ref|ZP_00781911.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
gi|76584749|gb|EAO61492.1| conserved hypothetical protein [Streptococcus agalactiae 18RS21]
Length = 136
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVG 224
+ L + N T L +F+G+ ++ LP A+ + + ++PG +F+
Sbjct: 1 MYDLGDTLTAWLLNLAQPVTFLTIFLGIGILYFILPNARIRKVRYVIPGTLFSTFVIGFF 60
Query: 225 AVLFTHYIVTFSTYSTMYAGLASIMTC--LVFLYMLGVFFILGAELNASMIIYYWRK 279
+ L + Y++ S++ +++ L ILGA LNAS+ K
Sbjct: 61 SNLISQYVLNRVEKMVDIKTFGSVVIFILMLWFIFLAHIMILGAILNASVQEIATGK 117
>gi|297156600|gb|ADI06312.1| ribonuclease BN [Streptomyces bingchenggensis BCW-1]
Length = 298
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 72/258 (27%), Gaps = 23/258 (8%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ E + + AS ++ A L+ P ++ A A G + + V G
Sbjct: 32 VARLTERLLAVNTLEAASRLAAQAFLTALPLLMAVAAFAPE-GWKGLLADSVRSVVGVRG 90
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + L K + + A ++ AL+ R + + R
Sbjct: 91 KALEEL--RRALAASGTTRKPSGAVGLVVALVSATAFSRALQGVCERCWNLPRARIRVAA 148
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
++ +V V ++ + + +
Sbjct: 149 WRWLLWVLVWLAVLFVQAPVRRGFGTGIVSGLVLSLLSAV-------------------L 189
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS-TMYAGLASIMT 250
+ L + + +LPG + V + S L + T
Sbjct: 190 LWWWTQHLLLGGRVGWLPLLPGAVLAGTGTVALGYASRLVMPRAMDRSLADLGPLGPVFT 249
Query: 251 CLVFLYMLGVFFILGAEL 268
L +L ++ + + G +
Sbjct: 250 LLSWLIVVFLIVVAGLAI 267
>gi|15605943|ref|NP_213320.1| hypothetical protein aq_453 [Aquifex aeolicus VF5]
gi|14916761|sp|O66760|Y453_AQUAE RecName: Full=Uncharacterized protein aq_453
gi|2983114|gb|AAC06719.1| putative protein [Aquifex aeolicus VF5]
Length = 257
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 21/268 (7%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVP 60
+R+ +F ++DA + D AS ++L LL + P IVF A L+ +LG +
Sbjct: 4 LRKLLNALFLCLWDAFRY----DYSYHASALTLQLLLVLAPLIVFLAALSSYLG-FIKLD 58
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAY 120
+ +V+ +P+ I + + K IS L + +FS N V+ + SL+
Sbjct: 59 LLEEVLREHFPKQTHAVIAEILKA--KEQGKTASLISLLVSYFFSVNFVKKIAKSLSYVV 116
Query: 121 RVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNG 180
+ + + + LV+ SFV ++ +F +G L + +
Sbjct: 117 E------RKKRDVHEVFFWVGFPILLVLFSFVTGMSFYVSILLKTYFKGIGFLSNLASSL 170
Query: 181 RIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYST 240
+ +++L+ I ++ + +S+L + + +FT Y V S
Sbjct: 171 PLLFLVISLYWSFIKIN--------RKISLLISSFLVYFFASLLQYIFTLYTVYVFKGSV 222
Query: 241 MYAGLASIMTCLVFLYMLGVFFILGAEL 268
+Y L++I+ ++L + F++GA
Sbjct: 223 LYGSLSTIVLFFLWLNFNFLLFLVGARF 250
>gi|167755878|ref|ZP_02428005.1| hypothetical protein CLORAM_01395 [Clostridium ramosum DSM 1402]
gi|167704817|gb|EDS19396.1| hypothetical protein CLORAM_01395 [Clostridium ramosum DSM 1402]
Length = 236
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 37/229 (16%), Positives = 78/229 (34%), Gaps = 15/229 (6%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
+S+ P A A L + T+ ++ + I I + + I
Sbjct: 1 MSIIPICSLFAFFASILNVD--LGTLEQLLKNYLTPEFSNII---IASLKSSHITLSSII 55
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
+ + S G+ L + R+ I +L+ + V L+++ + I
Sbjct: 56 ILFISLFVVSRGINQLYGISKNLFPSAHQRNIIIEQLLMLLKTIAVFVLLLLIISILTII 115
Query: 157 PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
PL ++ I L FI L ++ +P I I+ G
Sbjct: 116 PLINYFINFKD---------ILVLGDLYLFLVFFIILFLLYKIIPDVHVHIFDIVKGAFC 166
Query: 217 TWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ I ++ Y + Y+++Y LAS++ ++ ++ +G
Sbjct: 167 SSILMLILLSALEFYFS-IADYTSVYGPLASVVVIMISFSLIAETIFIG 214
>gi|167945004|ref|ZP_02532078.1| hypothetical protein Epers_00225 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 83
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLG-AHQFVPTVIDVVFG 68
HF ++ G + ++ + LLS+ P + L + + + + VF
Sbjct: 30 FHHFAKDGGIQNTAALTYTTLLSLVPLMTVMLALFSAFPGSEKAASEIENFVFQ 83
>gi|307822207|ref|ZP_07652439.1| ribonuclease BN [Methylobacter tundripaludum SV96]
gi|307736773|gb|EFO07618.1| ribonuclease BN [Methylobacter tundripaludum SV96]
Length = 106
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 21/55 (38%)
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
+ V S +Y IM +++Y+ G FI GA L A+ +
Sbjct: 52 FGSSLAQVYRSDADPIYGAFGGIMALPLWIYLSGCIFIFGACLCAAQAEALNTRN 106
>gi|292616290|ref|XP_002662959.1| PREDICTED: im:7138475 [Danio rerio]
Length = 1713
Score = 46.2 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 20/224 (8%), Positives = 60/224 (26%), Gaps = 9/224 (4%)
Query: 51 GFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGV- 109
G I +F + V+ + + L ++ + ++ + +
Sbjct: 1446 GGFHVFVMASEAIYYIFILYYMVVQGKLMKQQKWAYFKSKWNLLELAIIILSWSALSVFV 1505
Query: 110 -EALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ + + + + + +L + ++ + + L K
Sbjct: 1506 KRTILGNRDIEFYQNNKDMFVSFNETATADAVLGYLIAFLVLLATIKLWHLLRLNPKLHM 1565
Query: 169 ALGNLLLIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL 227
L + M +F+ + + L T I +G +
Sbjct: 1566 ITSTLQRAWTDISGFIVVMTIMFLAYSIACNLMYGWRLNSYRTLLEAAQTIICLQLG--I 1623
Query: 228 FTHYIVTFSTYSTMYAGL--ASIMTCLVFLYMLGVFFILGAELN 269
F + Y+ + S + + F+ + ++ N
Sbjct: 1624 FNY--DEVLDYNPVLGAFLIGSCIIFMTFVVLNLFISVILVAFN 1665
>gi|254386648|ref|ZP_05001944.1| integral membrane protein [Streptomyces sp. Mg1]
gi|194345489|gb|EDX26455.1| integral membrane protein [Streptomyces sp. Mg1]
Length = 260
Score = 45.4 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 34/265 (12%), Positives = 74/265 (27%), Gaps = 27/265 (10%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIA 75
H E D W A + L++ P ++ A + G A
Sbjct: 14 WGHVRELDLWQRALGFAALGFLTLVPLLIVV----SAADAADGRGFAQWLGDGLGVSAPA 69
Query: 76 KPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLIS 135
+ + + + + F + L+ + + + R W R
Sbjct: 70 RLEIERLFALPGQAWRTTTAFGLALLTVFGLSFGTMLQSGYEQVWDLPPARWWARWRHAL 129
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ VL+ + L +S R T+L + +
Sbjct: 130 WLAVLIGVLYLAGIS----------------------PPWRDSTVRGVVTVLIGTLFFWW 167
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVF 254
L A + ++ PG T + + + ++ + Y +++ +
Sbjct: 168 SQRLLLAGRVGWTALFPGAAATMLGLLGLRIFSRLVFSPLIASSAVTYGPFGTVLVLQSW 227
Query: 255 LYMLGVFFILGAELNASMIIYYWRK 279
L +GV GA + + R+
Sbjct: 228 LVAIGVVVFGGALVGRLLHEELRRR 252
>gi|213580362|ref|ZP_03362188.1| hypothetical protein SentesTyph_03755 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 162
Score = 45.0 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+ ++ L + ++ A ++ ++ LP + + +++ G I + V
Sbjct: 43 YLDSIEWLKPAWHLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIK 102
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ T+ + + S A S++ + F Y + A A+ + P
Sbjct: 103 IIMTYTLPSLVK-SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 157
>gi|302865919|ref|YP_003834556.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
gi|302568778|gb|ADL44980.1| ribonuclease BN [Micromonospora aurantiaca ATCC 27029]
Length = 280
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 43/272 (15%), Positives = 80/272 (29%), Gaps = 12/272 (4%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I A D A+ I+ ++V P + L G L V +
Sbjct: 10 RITAAAFRPVRGRDLSLHAAAITFYGAIAVVPVALLAIWLTGLLAGADRVRRLTGYAIDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I L GL + ALA+ +S E LR +
Sbjct: 70 LPTEIGA---HRAAAALVEAGLGLTPLLALASLLPASLYGEGLRRAFVSVAEPRAESGAL 126
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + L + ++ + + +PL VR+ +++ + L
Sbjct: 127 VGWRGRLLLLPLLAPAPALLLSILLGLPLTTRLVRQGGWVGALGVVLSFFAVWLVLTPVL 186
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL---A 246
V P ++ + FT + F + + G
Sbjct: 187 IWVFRVVGPASPD----WLATVALGSFTAANLSGFVHGFVLFCSLPLDLGVPFGGFDEIG 242
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ L++LY+ V + G +A++ WR
Sbjct: 243 GGVAVLLWLYLFHVIVLSGY--SATLAASRWR 272
>gi|256783292|ref|ZP_05521723.1| integral membrane protein [Streptomyces lividans TK24]
gi|289767165|ref|ZP_06526543.1| integral membrane protein [Streptomyces lividans TK24]
gi|289697364|gb|EFD64793.1| integral membrane protein [Streptomyces lividans TK24]
Length = 268
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 27/272 (9%), Positives = 78/272 (28%), Gaps = 27/272 (9%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + + + A + AL+++ P ++ A +
Sbjct: 12 WDWLAASSLVRRGRDLELMHRAMGFATLALVTLAPLLIVVAAADPL----GRGGFASWLA 67
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G + + +I+ + F + +++ R + +
Sbjct: 68 DGMGLSGRSAKVLTDIISPPTKVVGTTSVWGGILLGVFGVSFAASVQNGYERIWELPAGP 127
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
I R +++ +L A + + + + + RI +
Sbjct: 128 WHRIWRQMTWVIMLTAYLYQEVQTRTALHG----------------------SARIALST 165
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA-VLFTHYIVTFSTYSTMYAGL 245
+ + + FL + + +LPG T + + + + + Y +
Sbjct: 166 ASGMLFFWWGQHFLLGGQVRWRDLLPGAFATMVGLIGLRGFSYLFFTPLILDNAFSYGTV 225
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ +L +G GA + ++W
Sbjct: 226 GIVLVVESWLIGVGFVVFGGAMVGHWFCEHHW 257
>gi|21225684|ref|NP_631463.1| integral membrane protein [Streptomyces coelicolor A3(2)]
gi|7160148|emb|CAB76333.1| putative integral membrane protein [Streptomyces coelicolor A3(2)]
Length = 268
Score = 45.0 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 27/272 (9%), Positives = 79/272 (29%), Gaps = 27/272 (9%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+ + + + A + AL+++ P ++ A +
Sbjct: 12 WDWLAASALVRRGRDLELMHRAMGFATLALVTLAPLLIVVAAADPL----GRGGFASWLA 67
Query: 67 FGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMR 126
G + + +I+ + F + +++ R + +
Sbjct: 68 DGMGLSGRSAKVLTDIISPPTKVVGTTSVWGGILLGVFGVSFAASVQNGYERIWELPSGP 127
Query: 127 SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM 186
I R +++ +L A + + + + + RI +
Sbjct: 128 WHRIWRQMTWVALLTAYLYQEVQTRTALHG----------------------SARIALST 165
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA-VLFTHYIVTFSTYSTMYAGL 245
+ + + FL + + +LPG + T + + + + + Y +
Sbjct: 166 ASGMLFFWWGQHFLLGGQVRWRDLLPGAVATMVGLIGLRGFSYLFFTPLILDNAFSYGAV 225
Query: 246 ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ +L +G GA + ++W
Sbjct: 226 GIVLVVESWLIGVGFVVFGGAMVGHWFCEHHW 257
>gi|301115188|ref|XP_002905323.1| mucin, putative [Phytophthora infestans T30-4]
gi|262110112|gb|EEY68164.1| mucin, putative [Phytophthora infestans T30-4]
Length = 3104
Score = 44.6 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 78/291 (26%), Gaps = 42/291 (14%)
Query: 2 REYFCIVFDIIYDAIEHF-VEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ--- 57
R I+ I + +EED MA+ L+V ++ LA +
Sbjct: 2705 RRLQLIILTGIVAFADRIGIEEDEALMAA---FYFFLAVVAIVLVLFALAAGFAFYHHSM 2761
Query: 58 ------------------------FVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
V + VF + + + G+
Sbjct: 2762 SVDVWSAFYPTGLRNSFAMCVVGFGVALWMLSVFPLVSMSSYELVMEL------RYRVGI 2815
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
AL + + V L + + ++ +G + S FV
Sbjct: 2816 GLAVALFSLWAV--VVGGLCYAFVSVRAIPNNDAFRFKHFAVWGSLYGDSKMAFRYFFVV 2873
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
L V + L+ ++ I F ++ + +
Sbjct: 2874 TVGFQGLLGVITGAVSGIPTQLVALMVTHLLFVVVALIIRPFAARWVLGVVVGLRVVAIT 2933
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ +++ + L T + + + +I+ L F + +F ++
Sbjct: 2934 NLLCSFAFLTSSELSTLWRGIVAQGFVI---FNAIVFFLFFARYVAMFVLV 2981
>gi|87306652|ref|ZP_01088799.1| probable ribonuclease BN [Blastopirellula marina DSM 3645]
gi|87290831|gb|EAQ82718.1| probable ribonuclease BN [Blastopirellula marina DSM 3645]
Length = 255
Score = 44.6 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 18/216 (8%), Positives = 58/216 (26%), Gaps = 5/216 (2%)
Query: 53 LGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEAL 112
+ + + + + A + + + + ++
Sbjct: 22 ITEQDLRLELRNWIASESSDETAAAFMNFVREGAQSDTAVIGFGLLGLLLVGATAFAWLE 81
Query: 113 RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
R + L + L + V+ LA + K F
Sbjct: 82 RAFSRIFDLEYPSSETWRQLLWRIVFYRLRAYVFVMALGFVGVAALAFLFAWKQFLIRNG 141
Query: 173 LLLIIWNGR---IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFT 229
+ A+++ ++ + V +P L G + + W + +
Sbjct: 142 SAWGLSIFLPTQYAASLMFNWLLITLVFWQVPRTNVSFWHALRGALLCTVMWEICRIPID 201
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
++ + + + + ++ +++LY + G
Sbjct: 202 IFV--VTGKMSTFGMIGFLIASMLWLYYAIWIILFG 235
>gi|169349833|ref|ZP_02866771.1| hypothetical protein CLOSPI_00571 [Clostridium spiroforme DSM 1552]
gi|169293401|gb|EDS75534.1| hypothetical protein CLOSPI_00571 [Clostridium spiroforme DSM 1552]
Length = 246
Score = 44.6 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 52/127 (40%)
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ + I + ++ + + + I + + F + FL K I +
Sbjct: 90 ILIRIKAIIMFISLIIGLILLAFINYFTRSIIVIGIGFLVLFYFFYRFLSFEKRFITYGI 149
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
G +FT I ++ + F ++I ++ Y +Y LASI+ L+ +Y++ G LN
Sbjct: 150 VGSLFTCIGIMIVGIGFIYFIDNYTRYDVLYGPLASIVVLLISIYLISSIIYFGYCLNHE 209
Query: 272 MIIYYWR 278
Y +
Sbjct: 210 YTKYVKK 216
>gi|223937053|ref|ZP_03628961.1| cell divisionFtsK/SpoIIIE [bacterium Ellin514]
gi|223894334|gb|EEF60787.1| cell divisionFtsK/SpoIIIE [bacterium Ellin514]
Length = 919
Score = 44.6 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 51/190 (26%), Gaps = 23/190 (12%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
G+ + + +S N + FG S ++
Sbjct: 21 GIVLVGFAVLLLVALISYNPRDVSANAT----PPNHPAHNAIGPFG--AWLSYIFLLTFG 74
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
V + L L L + + IG+ ++ K + ++
Sbjct: 75 VSSYVLPFLFVFVGLGCFLEMLSYVRRRWAWTLVIFFCCIGMFDLYRDYLEGLHKKLRVM 134
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTMY-AGLASIMTCLVFLYMLGVFFILGAELNA 270
PG I + Y Y + + ++ LY + + F+ +L A
Sbjct: 135 PGGIIGV---------------NLNNYIFNYFGTTGATIIFMM-LYFISILFLTNFQLGA 178
Query: 271 SMIIYYWRKK 280
+ R K
Sbjct: 179 WIRALVNRDK 188
>gi|213027633|ref|ZP_03342080.1| hypothetical protein Salmonelentericaenterica_36883 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 161
Score = 44.6 bits (104), Expect = 0.016, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 43/116 (37%), Gaps = 1/116 (0%)
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
+ ++ L + ++ A ++ ++ LP + + +++ G I + V
Sbjct: 42 YLDSIEWLKPAWHLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFIAAIGFEVIK 101
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
++ T+ + + S A S++ + F Y + A A+ + P
Sbjct: 102 IIMTYTLPSLVK-SPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMP 156
>gi|255019177|ref|ZP_05291303.1| transport protein [Listeria monocytogenes FSL F2-515]
Length = 76
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 187 LALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
+ +F+ F++ P +S ++S+LPG +F+ I W V ++ F +Y+ F YS Y +
Sbjct: 1 MVIFVVFTFLYWVAPNRRSTLISVLPGALFSTIGWTVASLGFAYYVNNFGNYSATYGSIG 60
Query: 247 SIMTC 251
I+
Sbjct: 61 VIIIF 65
>gi|111221127|ref|YP_711921.1| putative glycosyl transferase [Frankia alni ACN14a]
gi|111148659|emb|CAJ60333.1| Putative glycosyl transferase [Frankia alni ACN14a]
Length = 271
Score = 44.6 bits (104), Expect = 0.017, Method: Composition-based stats.
Identities = 41/266 (15%), Positives = 87/266 (32%), Gaps = 13/266 (4%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
D + D +A+ ++ A ++V P ++ NL G L + D + A P+
Sbjct: 6 RDVVGALRGHDLALLAAGVTYYAAIAVVPCVLVAVNLLGLLLGRPRAAELGDSLADALPD 65
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ ++ A + + +AAA +S E LR + R E
Sbjct: 66 GLGA---PAVVLAAFDAALTMSPLVVVAAAVPASFYGEGLRRAFVRLAGTSE-------G 115
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
L+ + L L + + + L + + F G + LAL
Sbjct: 116 LVGWRGRLGVLPLLAAAPVLLLPVLLVTPTLARLFAERGVSAGLGVIVAFAVDWLALTAT 175
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA---GLASIM 249
L+ V+ + + + L T F ++ + + + +
Sbjct: 176 LVIVYRVVGPGRPGWAATLWAAASTGSFVAGFVQGFVLFLSFHLDLGLPFGGFRAIGAAV 235
Query: 250 TCLVFLYMLGVFFILGAELNASMIIY 275
+L++L + ++G L +
Sbjct: 236 AVGFWLFLLHLIVLVGYGLALRLDER 261
>gi|297521656|ref|ZP_06940042.1| putative ribonuclease [Escherichia coli OP50]
Length = 145
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 48/141 (34%), Gaps = 1/141 (0%)
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ ++ + + + ++ L + ++ A ++ ++ L
Sbjct: 1 MIALIVTLSITSVAGSAQQMIISALHLNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRL 60
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
P + + +++ G I + V ++ T+ + + S A S++ + F Y
Sbjct: 61 PRHRPRKKALIRGTFLAAIGFEVIKIVMTYTLPSLMK-SPSGAAFGSVLGLMAFFYFFAR 119
Query: 261 FFILGAELNASMIIYYWRKKP 281
+ A A+ + P
Sbjct: 120 LTLFCAAWIATAEYKDDPRMP 140
>gi|126347976|emb|CAJ89696.1| putative integral membrane protein [Streptomyces ambofaciens ATCC
23877]
Length = 268
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 85/284 (29%), Gaps = 34/284 (11%)
Query: 1 MREYFCIVFDIIYDA-----IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA 55
M ++ + + + + A + AL+++ P ++ A
Sbjct: 1 MNRFWQPFHRVWDRLAASSLVRRGRDLELMHRAMGFATLALVTLAPLLIVVAA----FDP 56
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ G + + +I +A A F + +++
Sbjct: 57 LGRGGFASWLSDGMGLSGRSARVLTDIFSPPPKVVGTTSVWGGIALAVFGVSFAASVQNG 116
Query: 116 LNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL 175
R + + + R +++ L A + + + +
Sbjct: 117 YERIWELPSGPWHRVWRQLTWVIALTAYLYQEVQTRTALHG------------------- 157
Query: 176 IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT- 234
+ RI + + + FL ++ + +LPG I T + + F++ + T
Sbjct: 158 ---SLRIALSTATGILFFWWGQHFLLGSQVRWRDLLPGAIATVVGLIGLR-GFSYLVFTP 213
Query: 235 -FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ Y + ++ +L +G GA + ++W
Sbjct: 214 LILDNAISYGTVGIVLVVESWLIGVGFVVFGGAMVGHWFCEHHW 257
>gi|253314944|ref|ZP_04838157.1| hypothetical protein SauraC_01965 [Staphylococcus aureus subsp.
aureus str. CF-Marseille]
Length = 108
Score = 44.3 bits (103), Expect = 0.021, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 19/35 (54%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIV 44
+ + I ++D +A+ ++ +L++FP ++
Sbjct: 72 NFLSYLIYRIGKDDASGLAAQMTYHFVLAMFPMLL 106
>gi|315502475|ref|YP_004081362.1| ribonuclease bn [Micromonospora sp. L5]
gi|315409094|gb|ADU07211.1| ribonuclease BN [Micromonospora sp. L5]
Length = 280
Score = 44.3 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 74/259 (28%), Gaps = 10/259 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I A D A+ I+ ++V P + L G L V +
Sbjct: 10 RITAAAFRPVRGRDLSLHAAAITFYGAIAVVPVALLAIWLTGLLAGADRVRRLTGYAIDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I L GL + ALA+ +S E LR +
Sbjct: 70 LPTEIGA---HRAAAALVEAGLGLTPLLALASLLPASLYGEGLRRAFVSVAEPRAESGAL 126
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + L + ++ + + +PL VR+ +++ + L
Sbjct: 127 VGWRGRLLLLPLLAPAPALLLSILLGLPLTTRLVRQGGWVGALGVVLSFLAVWLVLTPVL 186
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGL---A 246
V P ++ + FT + F + + G
Sbjct: 187 IWVFRVVGPASPD----WLATVALGSFTAANLSGFLHGFVLFCSLPLDLGVPFGGFDEIG 242
Query: 247 SIMTCLVFLYMLGVFFILG 265
+ L++LY+ V + G
Sbjct: 243 GGVAVLLWLYLFHVIVLSG 261
>gi|77413114|ref|ZP_00789314.1| putative ribonuclease BN [Streptococcus agalactiae 515]
gi|77160815|gb|EAO71926.1| putative ribonuclease BN [Streptococcus agalactiae 515]
Length = 109
Score = 43.9 bits (102), Expect = 0.028, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 1 MREYFCIV-----FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGA 55
++++F + + I + HF + A ++ L++ FP +V AN+ +
Sbjct: 3 LKKFFEDLLAKLEYRPIQVFMRHFQSAEMDLSAIAVAYYLLVTAFPLLVIAANIFPYFHI 62
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYF 104
+ V ++ ++ P+ I +P + + + P+ G+ ++L A +
Sbjct: 63 N--VSDLLSLMQKNLPKNIYEPASRLAVDAFSKPSTGILGFASLTAFWT 109
>gi|170769629|ref|ZP_02904082.1| tRNA-processing ribonuclease BN [Escherichia albertii TW07627]
gi|170121437|gb|EDS90368.1| tRNA-processing ribonuclease BN [Escherichia albertii TW07627]
Length = 47
Score = 43.5 bits (101), Expect = 0.032, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 245 LASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
LA I V++Y +LGAE+ ++ Y K+
Sbjct: 2 LAVIPILFVWVYWTWCIVLLGAEITVTLGEYRKLKQ 37
>gi|113955506|ref|YP_729778.1| hypothetical protein sync_0558 [Synechococcus sp. CC9311]
gi|113882857|gb|ABI47815.1| conserved domain protein [Synechococcus sp. CC9311]
Length = 71
Score = 43.1 bits (100), Expect = 0.043, Method: Composition-based stats.
Identities = 7/48 (14%), Positives = 21/48 (43%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG 51
+ ++ A + + D +++ + L S+FP ++ ++A
Sbjct: 12 RLRRLVRSLWRACLRWAKCDCVDLSAAFAYYTLQSIFPILLISLSIAS 59
>gi|242005821|ref|XP_002423759.1| class A rhodopsin-like G-protein coupled receptor GPRgph, putative
[Pediculus humanus corporis]
gi|212506961|gb|EEB11021.1| class A rhodopsin-like G-protein coupled receptor GPRgph, putative
[Pediculus humanus corporis]
Length = 1008
Score = 43.1 bits (100), Expect = 0.048, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 57/208 (27%), Gaps = 43/208 (20%)
Query: 108 GVEALRISL-NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY---- 162
V + S N M + ++ SF LA ++ ++ + + Y
Sbjct: 699 WVLGIIASFGNLLVIGWRMNYKHKNKVHSFLITNLAVGDFLMGFYLLIIASVDAHYRGVY 758
Query: 163 -----------VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSIL 211
+ L L + + F+ ++F S+I ++
Sbjct: 759 SVHDEEWRSSKLCSLAGFLSTLSSELSVFTLILITFESFLVIMFPFKVTRLQMSEIRWVM 818
Query: 212 PGVIFTWISWVVGAVLFTHYIVTFSTYSTM---------------YAGLASIMTCLVFLY 256
GV + +L+ Y F + + Y+ +FL
Sbjct: 819 LGVWIAAVCLSGLPLLYKDYFKNFYGRTAVCLALCITIDKNSGWKYSAF-----IFIFLN 873
Query: 257 MLGVFFI-------LGAELNASMIIYYW 277
+ + I GA N + +
Sbjct: 874 FISLILIAMGYIWMYGAAKNTRLAVSRN 901
>gi|308273258|emb|CBX29861.1| unknown protein [uncultured Desulfobacterium sp.]
Length = 121
Score = 43.1 bits (100), Expect = 0.050, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 9 FDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAG--FLGAHQFVPTVIDVV 66
F +++ A+ F + G+ ++S I+ + L+S+ PFI+ L G + +
Sbjct: 29 FGLLWQALGKFNNDSGFFLSSGITFNILISLIPFIMLLLALVGTYLYNDQEVFNHIRAYF 88
Query: 67 FGAWPEVIAKPITDEI 82
P + K + +
Sbjct: 89 RDIAPALDPKITKNLL 104
>gi|207108140|ref|ZP_03242302.1| putative ribonuclease N [Helicobacter pylori HPKX_438_CA4C1]
Length = 125
Score = 42.7 bits (99), Expect = 0.055, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 3/100 (3%)
Query: 166 FFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGA 225
++ R T I + V FT +SW V
Sbjct: 2 QVFFEDKDSSLLHVLRWIGTYAFFLILFTIPTN---KVFKHYFWVFLWVFFTSVSWHVLK 58
Query: 226 VLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
FT+Y++ TY +Y ++ + + ++Y+ + ++G
Sbjct: 59 WAFTYYVLYNRTYHELYGSVSILWFLMSWVYVSWLVILIG 98
>gi|296111341|ref|YP_003621723.1| MDR-type permease [Leuconostoc kimchii IMSNU 11154]
gi|295832873|gb|ADG40754.1| MDR-type permease [Leuconostoc kimchii IMSNU 11154]
Length = 606
Score = 42.7 bits (99), Expect = 0.063, Method: Composition-based stats.
Identities = 36/249 (14%), Positives = 78/249 (31%), Gaps = 17/249 (6%)
Query: 15 AIEHFVEEDGWAMASHISLSALLSVFPF------IVFGANLAGFLGAHQFVPTVIDVVFG 68
+ F + + ++ L S ++ +G P V+ +
Sbjct: 66 LADKFGRKKIMLL--GLAFFTLFSAACMYANSLSMLLVFRFFQGIGGAIITPLVLPIGIN 123
Query: 69 AWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSW 128
+ I + + A+ A + Y S + + LN V+
Sbjct: 124 LLGKHNISKIAAVVGEFTALSAASGPAAGGMILEYTSWHWIF----GLNVPIGVIAFLLV 179
Query: 129 YITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLA 188
I S+ L+ ++ M + + + + + LI+ + L
Sbjct: 180 LIFTRESYDDTLVGKFDILGMLMLTLILGGLTFGLLEGREYGWTSTLILSSFGAGIVGLI 239
Query: 189 LFIGLIF-----VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
LFI + + F + + + T + VV +V+F +Y+ Y+ ++A
Sbjct: 240 LFIFVELKVSSPIVEFNLFREKTFTASSIVYLITGFALVVPSVIFNYYLQNVLNYTALHA 299
Query: 244 GLASIMTCL 252
L I L
Sbjct: 300 ALTIIPVSL 308
>gi|119468244|ref|ZP_01611370.1| tRNA processing exoribonuclease BN; required for maturation of
tRNA encoded by bacteriophages; dimer [Alteromonadales
bacterium TW-7]
gi|119448237|gb|EAW29501.1| tRNA processing exoribonuclease BN; required for maturation of
tRNA encoded by bacteriophages; dimer [Alteromonadales
bacterium TW-7]
Length = 88
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 16 IEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ 57
I +++ A +++ LLS+ P I G + +
Sbjct: 27 INRCIDDQITVNAGYLAYVTLLSLIPLIAVGVAIFSAFPGFE 68
>gi|218517092|ref|ZP_03513932.1| putative ribonuclease protein [Rhizobium etli 8C-3]
Length = 52
Score = 42.7 bits (99), Expect = 0.064, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 42/52 (80%)
Query: 1 MREYFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGF 52
MR+ ++D++YDAI H VE+DG+AMASH++LS+LL+VFPF++FG L F
Sbjct: 1 MRKVLRTIYDVVYDAICHMVEDDGFAMASHVALSSLLAVFPFLIFGTALQAF 52
>gi|328880407|emb|CCA53646.1| hypothetical protein SVEN_0359 [Streptomyces venezuelae ATCC 10712]
Length = 279
Score = 42.3 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 66/233 (28%), Gaps = 27/233 (11%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ W + + L++ P ++ GA + G A+ + +
Sbjct: 35 ELWQRSLGFAALGFLTLVPLLIVV----SAAGAGSGKGFAQWLGDGLGVSEPARVEIERL 90
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + A F + ++ R + + R R + + VLL
Sbjct: 91 FALPGQVRRATTAFGLALLAVFGLSFGTVVQSGYERVWNLPPARWRARWRHVLWLAVLLG 150
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ L ++ + P G T L+ + + L
Sbjct: 151 VLYLFAVAAFWRQGP----------------------GGGVVTTLSGILFFWWSQRLLLG 188
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVF 254
+ ++LPG + T I + V ++ + Y + + +
Sbjct: 189 GRIGWRALLPGAVATVIGLMGLRVFSRLVFSPLIASSAVTYGPFGAFLVIQTW 241
>gi|218506519|ref|ZP_03504397.1| putative ribonuclease protein [Rhizobium etli Brasil 5]
Length = 135
Score = 42.3 bits (98), Expect = 0.072, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 31/74 (41%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVF 67
+ D+ + +++ +A+ ++ LL++FP + +L G + + + +
Sbjct: 62 LRDVFWRVYHEVLDDRIMLIAAGVTFYLLLALFPALAALVSLYGLVADPVTISEHLRELA 121
Query: 68 GAWPEVIAKPITDE 81
G P I D+
Sbjct: 122 GLLPPGAFDLIADQ 135
>gi|294633834|ref|ZP_06712391.1| integral membrane protein [Streptomyces sp. e14]
gi|292830086|gb|EFF88438.1| integral membrane protein [Streptomyces sp. e14]
Length = 259
Score = 42.3 bits (98), Expect = 0.080, Method: Composition-based stats.
Identities = 29/266 (10%), Positives = 76/266 (28%), Gaps = 27/266 (10%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
+ + + + A + +L+++ P ++ A +V G
Sbjct: 15 FALVRRGRDLELMHRAMGFATLSLVTLAPLLIVVAAADPL----GEGGFAYWLVDGMGLS 70
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITR 132
+ + +I+ + A F + +++ R + + + R
Sbjct: 71 GRSARVLTDIISPPVKVISTTSVWGGVLLAVFGVSFAGSVQNGYERIWGLPPGPWHRVWR 130
Query: 133 LISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIG 192
+++ V+ A + + + N R+ + +
Sbjct: 131 QLTWLAVMTAYL----------------------YQEVLNRQQFEGLERVAVSTSTGALF 168
Query: 193 LIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLASIMTC 251
+ FL + +LPG I T + V + + Y + ++
Sbjct: 169 FWWGQRFLLGGQVPWRRLLPGAIATMVGLGGLRVFSNLVFTPLIVDNAVSYGTVGIVLVV 228
Query: 252 LVFLYMLGVFFILGAELNASMIIYYW 277
+L +G GA ++W
Sbjct: 229 ESWLTGVGFVVFGGAMFGRWFCEHHW 254
>gi|289804620|ref|ZP_06535249.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 88
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
LP + + +++ G I + V ++ T+ + + S A S++ + F Y
Sbjct: 1 WRLPRHRPRKKALIRGTFIAAIGFEVIKIIMTYTLPSLVK-SPSGAAFGSVLGLMAFFYF 59
Query: 258 LGVFFILGAELNASMIIYYWRKKP 281
+ A A+ + P
Sbjct: 60 FARLTLFCAAWIATAEYKDDPRMP 83
>gi|290954867|ref|YP_003486049.1| integral membrane protein [Streptomyces scabiei 87.22]
gi|260644393|emb|CBG67478.1| putative integral membrane protein [Streptomyces scabiei 87.22]
Length = 287
Score = 42.0 bits (97), Expect = 0.10, Method: Composition-based stats.
Identities = 32/278 (11%), Positives = 82/278 (29%), Gaps = 37/278 (13%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ + F G+ + ++ AL ++ P V + G A + +
Sbjct: 1 MLRVVGRFQRIAGFDRSMALASGALTALIPLAVLSGAVFGGESADRIINRY------GLT 54
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
A+ + + G+ + A + ++ + + + +
Sbjct: 55 GEGAEAVRAVFS--AEAASAGVGVFGTVFLAISVLSFSRTMQRLFEQTWELKPLGVRNTR 112
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ + VL ++ +V + + +
Sbjct: 113 NGLWWICVLSFYTAVIGWLYVALGGGRLGLAAAVCE------------------VPVTTV 154
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT-FSTYSTMY-------A 243
L F L A + ++LP + + +VL T Y+ F++Y + Y
Sbjct: 155 FLTFSGRILSAKRLAGAALLPFAVCAAVLTAAYSVLATVYLPRLFNSYVSRYGAAGAAFG 214
Query: 244 GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKKP 281
+ + ++ L + LG E+ ++ +P
Sbjct: 215 MASVLFGAMLVLVLSSA---LGREVREELLRIRQGLRP 249
>gi|331082596|ref|ZP_08331719.1| hypothetical protein HMPREF0992_00643 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330400215|gb|EGG79857.1| hypothetical protein HMPREF0992_00643 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 638
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 76/238 (31%), Gaps = 24/238 (10%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
+ ++ F + + V + + I A +F +
Sbjct: 22 ILSLTFSIFVFFNFQSVIYSESMDVLENYNKEYIDIIV--------QAASVVFGVFLFFF 73
Query: 102 AYFSSNGVEALRI---SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+++SN R + + +R + L S L + + + +F +
Sbjct: 74 IWYASNVFLNQRKKEIGIYIFMGLDNVRIGKMYMLESVFIGLFSLLAGIGTGVLFSKLFQ 133
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV---- 214
L I A M + GL+ + + S ++++L G
Sbjct: 134 MLLLKLSDISVDIKFSFSWEAILITAGMFLVIYGLMTLKSYHTLKTSSVLNLLSGAKQQE 193
Query: 215 --------IFTWISWVVGAVLFTHYIVT-FSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
F I+ VG +LF +Y+ +++ L +++ +V +Y+L I
Sbjct: 194 MQKEKWIITFLKIASGVGILLFGYYLAWDTGDINSLGNALGAVVLVIVGVYLLFSGLI 251
>gi|288920015|ref|ZP_06414335.1| ribonuclease BN protein [Frankia sp. EUN1f]
gi|288348579|gb|EFC82836.1| ribonuclease BN protein [Frankia sp. EUN1f]
Length = 71
Score = 41.6 bits (96), Expect = 0.14, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Query: 184 ATMLALFIGLIFVHLFLPAAKSK-IMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
+L + I + + P + + + PG + W+ + F Y+ F +Y+ Y
Sbjct: 1 MLVLLVIIMIALPYWSAPNVRVRGFRWLTPGSALAVVIWLAASAGFGLYVANFGSYNKTY 60
Query: 243 AGLASIMTCL 252
LA ++ L
Sbjct: 61 GTLAGVIIFL 70
>gi|284034453|ref|YP_003384384.1| hypothetical protein Kfla_6592 [Kribbella flavida DSM 17836]
gi|283813746|gb|ADB35585.1| hypothetical protein Kfla_6592 [Kribbella flavida DSM 17836]
Length = 769
Score = 41.2 bits (95), Expect = 0.16, Method: Composition-based stats.
Identities = 27/241 (11%), Positives = 67/241 (27%), Gaps = 4/241 (1%)
Query: 38 SVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTIS 97
++ P +V L P + +F PE P+ ++ +LA +
Sbjct: 366 ALAPLLVIPVLLMKPSSPDGLTPAGVQRLFQTIPERSLLPVLLGVVLLLAASRMQARSRW 425
Query: 98 ALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIP 157
+ + + + + GY A + +V++ +A+
Sbjct: 426 IWVGVISCLAALHNIESGVPATVAAALLLVALRAGWRALGYFAAAWIGVVVVYAGVLALA 485
Query: 158 LALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
+ + + +F+ + V A G
Sbjct: 486 GGSLRPEYWAGFVLEFANGFAQLPMPPYGNYVFVLFVLVAGTASAFPVVWR----GPAAM 541
Query: 218 WISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
++ G ++ F Y + L + L+ + ++ ++GA +
Sbjct: 542 SVAATGGLYFGAWGLLMFPYYVGRSSSLGQLQFFLIPASVAAIWLLIGAARAVQVRRLTP 601
Query: 278 R 278
R
Sbjct: 602 R 602
>gi|307326457|ref|ZP_07605652.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
gi|306887865|gb|EFN18856.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
Length = 278
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 75/258 (29%), Gaps = 27/258 (10%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+E V + A+ ++ A L+ P ++ A + ++ + V
Sbjct: 22 RFLERLVAVNVLEAATRLAAQAFLTALPLLMAVAAFV-----PDTLQNLLADSLRSVVGV 76
Query: 74 IAKPITDEILQVLAVPAKGL--FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + + L ++ AL+ R + + R+
Sbjct: 77 RGDVLDEVRRTFTGPGTAKSPSGAVGLLVTLVSATAFSRALQAVCERCWGL--PRAAVRV 134
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
+ LL +T++++ L +LL W + +
Sbjct: 135 AAWRWLLWLLVWLTVLLVQAPLRRGFGTGIVSGLVLSLLSAVLLWWWTQHLLLS------ 188
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI-VTFSTYSTMYAGLASIMT 250
+ +LPG + V+ L + V + + L + T
Sbjct: 189 -----------GRVTWTYLLPGAVLAGAGTVLLGYLSRLLMPVAMARSLADFGPLGPVFT 237
Query: 251 CLVFLYMLGVFFILGAEL 268
L +L ++ + + G +
Sbjct: 238 LLTWLIVVFLIAVAGLAV 255
>gi|260589179|ref|ZP_05855092.1| putative efflux ABC transporter, permease protein [Blautia hansenii
DSM 20583]
gi|260540260|gb|EEX20829.1| putative efflux ABC transporter, permease protein [Blautia hansenii
DSM 20583]
Length = 638
Score = 41.2 bits (95), Expect = 0.17, Method: Composition-based stats.
Identities = 31/238 (13%), Positives = 72/238 (30%), Gaps = 24/238 (10%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
+ ++ F + + V + + I A +F +
Sbjct: 22 ILSLTFSIFVFFNFQSVIYSESMDVLENYNKEYIDIIV--------QAASVVFGVFLFFF 73
Query: 102 AYFSSNGVEALRI---SLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+++SN R + + +R + L S L + + + +F +
Sbjct: 74 IWYASNVFLNQRKKEIGIYIFMGLDNVRIGKMYMLESVFIGLFSLLAGIGTGVLFSKLFQ 133
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGV---- 214
L I A M + GL+ + + S ++++L G
Sbjct: 134 MLLLKLSDISVDIKFSFSWEAILITAGMFLVIYGLMTLKSYHTLKTSSVLNLLSGAKQQE 193
Query: 215 -----IFTWISWVVGAVL---FTHYIVT-FSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ G V F +Y+ +++ L +++ +V +Y+L I
Sbjct: 194 MQKEKWIITFLKIAGGVGILLFGYYLAWDTGDINSLGNALGAVVLVIVGVYLLFSGLI 251
>gi|307328124|ref|ZP_07607304.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
gi|306886243|gb|EFN17249.1| ribonuclease BN [Streptomyces violaceusniger Tu 4113]
Length = 286
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 24/245 (9%), Positives = 65/245 (26%), Gaps = 30/245 (12%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
I + + A + L++ P ++ A + + G
Sbjct: 28 IGRGWRRGSDFELLHRAMGFAALGFLTLVPLLIVVAAADPV----DRLGFAQWLAEGLGL 83
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
++ ++ + A FS L++ + + + R
Sbjct: 84 SSTSRGEVQQLFAPPKQALESTTAFGLATLAVFSLRFGTVLQVGYEKVWELPAGRWHTAW 143
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
R + + VL+ + L R+ ++ +
Sbjct: 144 RHLVWFVVLIGYLLLSAHLE-------------------------PGISRVLVAVVGTVL 178
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLASIMT 250
+ L + ++LPG + T + + V + + Y + +++
Sbjct: 179 FFWWSQRLLLGGRISWGALLPGALATGVGLLGLRVFSQLVFSPLIASNAVSYGPVGTVLV 238
Query: 251 CLVFL 255
+L
Sbjct: 239 VQSWL 243
>gi|238063334|ref|ZP_04608043.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
gi|237885145|gb|EEP73973.1| ribonuclease BN [Micromonospora sp. ATCC 39149]
Length = 281
Score = 41.2 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 40/259 (15%), Positives = 75/259 (28%), Gaps = 10/259 (3%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
I A D A+ I+ ++V P + G V +
Sbjct: 10 RITSAAFRPVRGRDLSLHAAAITFYGAIAVVPVALLAIWTTGLAAGADRVRRLTSYAIDT 69
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
P I + L GL ALA+ +S E LR + E
Sbjct: 70 LPTEIGA---HRAVAALLEAGLGLTPALALASLLPASLYGEGLRRAFVSVAIPREPGGSL 126
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
+ + L + ++ + +A+P+ +R+ +++ + G L
Sbjct: 127 VGWRGRLLLLPLLAPAPALLLSILLALPVTTGLLRQGGWRGALGVVLSFLGVWLVLTPVL 186
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA---GLA 246
V P +S L FT + F + + +
Sbjct: 187 LWVFRVVGPASPD----WLSTLGMGSFTAANLSGFLHGFVLFASLPLDLGVPFGGFDAIG 242
Query: 247 SIMTCLVFLYMLGVFFILG 265
+ L++LY+ V + G
Sbjct: 243 GGVAVLLWLYLFHVIVLAG 261
>gi|296102412|ref|YP_003612558.1| quinate dehydrogenase (pyrroloquinoline-quinone) [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295056871|gb|ADF61609.1| quinate dehydrogenase (pyrroloquinoline-quinone) [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 794
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 26/73 (35%)
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLG 259
P +I+ L + + VG + F V S Y + + I L+F+
Sbjct: 6 APRGIPRILQWLLAGLMAIVGLAVGGLGFKLVTVGGSGYFLIMGVVMVIAAILIFINRSS 65
Query: 260 VFFILGAELNASM 272
+ G AS+
Sbjct: 66 GIVLYGIAFIASL 78
>gi|327299976|ref|XP_003234681.1| chromosome condensation protein [Trichophyton rubrum CBS 118892]
gi|326463575|gb|EGD89028.1| chromosome condensation protein [Trichophyton rubrum CBS 118892]
Length = 513
Score = 40.8 bits (94), Expect = 0.22, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 56/189 (29%), Gaps = 8/189 (4%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL-----NRAYRVVEM 125
P+ A+ + +P T + S+ + +L N +
Sbjct: 227 PDDDAEALMKHKAVKKTIPLYIGLTTGFCGSFTSFSSFMLDAYRALSNTLPNPNTESILP 286
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + + +L + + V + L+Y P + + + +
Sbjct: 287 RNGGYSFMAVIAVMLYTILLCLSSIVVGAHLADGLSYFTP--PLRFKFMRNVLDRLVVVL 344
Query: 186 MLALFIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+IG IF+ ++ P + G I + LF Y +
Sbjct: 345 AFGCWIGTIFLAIWTPDRYRPVRERHWRGSAEFAIIFAPIGCLFRFYASLYFNPFVSSFP 404
Query: 245 LASIMTCLV 253
L + + ++
Sbjct: 405 LGTFLVNMI 413
>gi|167523383|ref|XP_001746028.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775299|gb|EDQ88923.1| predicted protein [Monosiga brevicollis MX1]
Length = 676
Score = 40.8 bits (94), Expect = 0.23, Method: Composition-based stats.
Identities = 15/207 (7%), Positives = 48/207 (23%), Gaps = 18/207 (8%)
Query: 31 ISLSALLSVFPFIVFGANL-AGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVP 89
++ ++ +FP L G + + + + + T
Sbjct: 439 VTYLSMQVIFPIAAVLMALSLGAVAVLRSERALRAIWYDNGHRSGETAGTLAHNWSYLRR 498
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
+ L + + ++ + R + L + +
Sbjct: 499 IRHLILPGCIMLLTTA---------AITSYMCALAPRVPTNMSSEFWVKYLPTMLLVAFS 549
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIM 208
F + L + + + +L L+ + ++ +
Sbjct: 550 LSAF-----IGRAGADSCGHIKPLRFLQTSYHPSFVMLLIRIAMLVGLMCYVDLPRDSWS 604
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTF 235
G + V+ ++ F
Sbjct: 605 --WLGAWSETNTLVLLWFALASFLGGF 629
>gi|328887356|emb|CCA60595.1| integral membrane protein [Streptomyces venezuelae ATCC 10712]
Length = 289
Score = 40.8 bits (94), Expect = 0.24, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 39/106 (36%), Gaps = 1/106 (0%)
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
V++A+ +A + PA +I ++ F+ + FL + + ++
Sbjct: 150 VVWLAVLVACLLLFVATPAPAESPAVITGLVAIGDLIGTFLFFWWSQRFLLCGRIRWRAL 209
Query: 211 LPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVFL 255
PG + T + + V ++ + Y +++ +L
Sbjct: 210 APGAVLTALGLLGLRVFSQLVFSPLIASNAVTYGQFGTVLVLQSWL 255
>gi|258570873|ref|XP_002544240.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237904510|gb|EEP78911.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 498
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 16/180 (8%), Positives = 51/180 (28%), Gaps = 8/180 (4%)
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +A+ +Q + L + AA + +A +
Sbjct: 278 FGGSVAEATLPIRMQFIRKVYSILTVQLLVTAALSGVSFFNNSYRRWVQAN----SWMMF 333
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ + + ++LL + + + + + L +
Sbjct: 334 VSVIGALVFMLLTYWKRKSYPSNLLFLSAFTLLEGYAISVVTSFYDSAIVMQALVLTLGI 393
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
F+ L + + L G ++ + + ++ F S +Y + +++
Sbjct: 394 FLALTLFACQTKYDFTSWIPYLFGALWFLVLFGFMSMFF----QMGSKMELVYGAIGALI 449
>gi|294811111|ref|ZP_06769754.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|326439547|ref|ZP_08214281.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|294323710|gb|EFG05353.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 284
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 6/71 (8%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYA 243
++ + L + + ++ PG + T + + +F+ ++ + ++ + Y
Sbjct: 180 LIGTCLFFWVAQRLLLGGRVRWRALFPGAVVTALCMLGLR-IFSQFVFSPLIASNAVTYG 238
Query: 244 GLASIMTCLVF 254
+++ +
Sbjct: 239 PFGTVLVLQSW 249
>gi|148264446|ref|YP_001231152.1| hypothetical protein Gura_2400 [Geobacter uraniireducens Rf4]
gi|146397946|gb|ABQ26579.1| hypothetical protein Gura_2400 [Geobacter uraniireducens Rf4]
Length = 80
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 7/68 (10%), Positives = 20/68 (29%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVV 66
+F+ + + F G ++ ++ LS+ P + + Q + +
Sbjct: 11 RLFNFLLRVLRGFKRNQGLLLSGALAYYTQLSIVPMSILALIVLTHFIEEQQLIHTLSTY 70
Query: 67 FGAWPEVI 74
Sbjct: 71 LEMVIPGY 78
>gi|242220678|ref|XP_002476102.1| predicted protein [Postia placenta Mad-698-R]
gi|220724683|gb|EED78709.1| predicted protein [Postia placenta Mad-698-R]
Length = 749
Score = 40.4 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 28/210 (13%), Positives = 59/210 (28%), Gaps = 11/210 (5%)
Query: 33 LSALLS--VFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
S +L+ + PF V A + + V A I+ + +
Sbjct: 184 FSTVLTGFIVPFYVTLAATQALISMSGHLSVVAADAGHATIANWLISISADSQSFSGPSS 243
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVV------EMRSWYITRLISFGYVLLASV 144
+ + A S G ++ I++++ R V V
Sbjct: 244 TTIVVATLWFTALILSLGAASIAITVSQWLHHHINGASKASRQSVRVWYFRRRGVARWKV 303
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLII--WNGRIYATMLALFIGLIFVHLFLPA 202
L I + + ++ L L ++ + T+L I + + P
Sbjct: 304 ELAIAVLPVLLQIALILFLVGLVILLWTLNSVVAKTVTALVVTLLLPTIFTVVIPALSPD 363
Query: 203 AKSKIMSILPG-VIFTWISWVVGAVLFTHY 231
K + + W + +L + Y
Sbjct: 364 CPYKSAPAWWFFKAWRCVLWCLEKLLISLY 393
>gi|254387335|ref|ZP_05002589.1| hypothetical protein SSAG_06891 [Streptomyces sp. Mg1]
gi|194346134|gb|EDX27100.1| hypothetical protein SSAG_06891 [Streptomyces sp. Mg1]
Length = 281
Score = 40.0 bits (92), Expect = 0.37, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 56/177 (31%), Gaps = 21/177 (11%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
A A F A++ + + + R + R + + +L+ + L++
Sbjct: 103 TAFGLAALAVFGLTFGSAVQTGYEKVWDLPTARWHTMWRHVVWLALLVCYLGLLVEIPAP 162
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
+ A +L + L + + ++LPG
Sbjct: 163 SNDAVGTALGTTGD------------------LLGTCLFFWGSQRLLLGGRVRWRALLPG 204
Query: 214 VIFTWISWVVGAVLFTHYIVT--FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
T + + LF+ + + ++ + Y +++ +L +G GA +
Sbjct: 205 AAATSVGLLGLR-LFSQLVFSPLIASNAVTYGQFGTLLVVQSWLVGVGFVTYGGALV 260
>gi|237755913|ref|ZP_04584505.1| putative membrane protein [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691938|gb|EEP60954.1| putative membrane protein [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 249
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 33/227 (14%), Positives = 84/227 (37%), Gaps = 20/227 (8%)
Query: 59 VPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNR 118
+ + +++ +P + + + A+ I+ L + +FS + A+ + +
Sbjct: 13 ISEIYFILYKIFPNSAESFLNTVLKLSQSQVAQKSIVITILLSIFFSKDLFVAISQAFSY 72
Query: 119 AYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV--------------------AIPL 158
Y I + L ++ L+ F+F+ I
Sbjct: 73 IYEAKVAEGKVILIISMLALPFLVTLILIFYVFLFIVKFLFSNIEKISSGVSKDILFIER 132
Query: 159 ALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
++ LG + +I+ ++ L +++ F +KS + +L IF
Sbjct: 133 IKNFLGFINNKLGLIQIILNLSEVFIFALIIWLIYYFFTPVQEKSKSFVKHVLTISIFIS 192
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ + + FT I+ F + + +Y + SI T ++++ + ++G
Sbjct: 193 VIMFLLKIAFTFLILNFLSTNPLYLTMGSIFTFIIWVKLCFDILLIG 239
>gi|213586188|ref|ZP_03368014.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. E98-0664]
Length = 88
Score = 40.0 bits (92), Expect = 0.41, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 29/87 (33%)
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
LA++ +L +I N +L +I ++ +P + L
Sbjct: 1 LAGASLAISSYLLSLRWASDLNTVIDNVLRILPLLLSWISFWLLYSIVPTTRVPNRDALV 60
Query: 213 GVIFTWISWVVGAVLFTHYIVTFSTYS 239
G + + G F YI F +Y
Sbjct: 61 GAFVAALLFEAGKKGFALYITMFPSYQ 87
>gi|222478936|ref|YP_002565173.1| protein of unknown function DUF224 cysteine-rich region domain
protein [Halorubrum lacusprofundi ATCC 49239]
gi|222451838|gb|ACM56103.1| protein of unknown function DUF224 cysteine-rich region domain
protein [Halorubrum lacusprofundi ATCC 49239]
Length = 724
Score = 39.6 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 22/237 (9%), Positives = 50/237 (21%), Gaps = 21/237 (8%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ L+V +VF + A+ P +
Sbjct: 21 VAFYW-LAVVAILVFLYGVYARFAAYARGSEDPRDRLTNLPARTVAATKTVLSNENQFDR 79
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ + + A L V + + F +V +
Sbjct: 80 DLYAGVMHTFVLWGFLTLLVA-TTILGFDIDVYRPLAGESFWVGDFYLAYQFTVDAFGLL 138
Query: 151 FVFVAIPLALAYVRKFFPALG-------NLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
FV + R L + + + + I
Sbjct: 139 FVVGVGMAMVRRYRDRDGRLWGKHTSLEDDAFVWTLFALGVGGFVVQALGIVGQPARADE 198
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ + F W+ T +Y + + L F ++ +
Sbjct: 199 TVSFIGMAMAAGFRWVGL------------TPGGAEAIYGVIWWSHSLLAFAFIAWI 243
>gi|328464144|gb|EGF35614.1| ribonuclease BN-like family enzyme [Lactobacillus rhamnosus MTCC
5462]
Length = 72
Score = 39.6 bits (91), Expect = 0.46, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 7 IVFDIIYDAIEHFVEEDGWAMASHISLSALLSVF 40
+ I AI + + A+ ++ LLS+F
Sbjct: 38 KFWVFIKLAINRISDSNIGQSAAALAYYTLLSLF 71
>gi|87311958|ref|ZP_01094068.1| hypothetical protein DSM3645_13380 [Blastopirellula marina DSM
3645]
gi|87285320|gb|EAQ77244.1| hypothetical protein DSM3645_13380 [Blastopirellula marina DSM
3645]
Length = 665
Score = 39.6 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 17/126 (13%), Positives = 37/126 (29%), Gaps = 2/126 (1%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ V I + I L+ L W ++ ++
Sbjct: 401 YFRVNGWWTFWGISISIAGMIMAILSSPNYPLGLFFTAWLSFWTIGVFFLGTMVWTTWS- 459
Query: 196 VHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI-MTCLVF 254
+ LF P + L G IF + + F+ Y ++Y L + + + +
Sbjct: 460 LVLFGPGGTVQRGLALGGAIFITAFATPFFIAEFVVLGIFAYYISIYIPLGVVLLVIMAW 519
Query: 255 LYMLGV 260
+ +
Sbjct: 520 RFYHWM 525
>gi|254393296|ref|ZP_05008446.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|197706933|gb|EDY52745.1| integral membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 266
Score = 39.3 bits (90), Expect = 0.64, Method: Composition-based stats.
Identities = 6/71 (8%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYA 243
++ + L + + ++ PG + T + + +F+ ++ + ++ + Y
Sbjct: 162 LIGTCLFFWVAQRLLLGGRVRWRALFPGAVVTALCMLGLR-IFSQFVFSPLIASNAVTYG 220
Query: 244 GLASIMTCLVF 254
+++ +
Sbjct: 221 PFGTVLVLQSW 231
>gi|241848460|ref|XP_002415642.1| pheromone and odorant receptor, putative [Ixodes scapularis]
gi|215509856|gb|EEC19309.1| pheromone and odorant receptor, putative [Ixodes scapularis]
Length = 1965
Score = 39.3 bits (90), Expect = 0.65, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 13/207 (6%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ +LL + ++ + ++ + A + A
Sbjct: 1611 VTALSLLGIVLVLICALYFLMAFPVTVGTTVLGYMILAGLLALYAVNFAFVVGATEASCG 1670
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY-------ITRLISFGYVLLAS 143
F + + FS V+ L + R + L+ L+
Sbjct: 1671 VRRFLMGLAYSIIFSGMLVKVL-NTWRLMGYHGNNRMHHDGTQLTSPAGLLVVACGLVVI 1729
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
++ +++ + P Y R + A + ML L + ++F L P
Sbjct: 1730 QVVLTAAWLVLMPPRIGLYERVWRCAPPASFEDELVVSMVYVMLLLAVTILFSVLTWPCR 1789
Query: 204 KSKIMSILPGVIF-----TWISWVVGA 225
+ S W++W V +
Sbjct: 1790 DNNGESRWILACCVFVSLAWLAWTVLS 1816
>gi|302669185|ref|YP_003832335.1| GGDEF domain-containing protein [Butyrivibrio proteoclasticus B316]
gi|302396849|gb|ADL35753.1| GGDEF domain-containing protein [Butyrivibrio proteoclasticus B316]
Length = 669
Score = 39.3 bits (90), Expect = 0.66, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 52/172 (30%), Gaps = 9/172 (5%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL 160
AA + ++ N + T+ +S + + +
Sbjct: 4 AAVAFLAFTVNIILNWNSFKNAWKKTDARDTKKLSLIRYGHFLLAANCFFLTEICWGIIY 63
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
+ P L ++ I +L + ++ +L + + G
Sbjct: 64 DH--HDVPELFPIVYSITVFYFLFMLLTMLTWARYIVAYLNKGNFRSKILTIGAWI-MFL 120
Query: 221 WVVGAVLFTHYIVTFSTYSTMY------AGLASIMTCLVFLYMLGVFFILGA 266
+G+++ + +Y+ + LA+ + L F +L + ++ A
Sbjct: 121 LGIGSLMLNRFYHFIFSYNEAHEYIPEKGSLATFIFVLAFYAILSMHMLIAA 172
>gi|240047313|ref|YP_002960701.1| hypothetical protein MCJ_001850 [Mycoplasma conjunctivae HRC/581]
gi|239984885|emb|CAT04878.1| HYPOTHETICAL PROTEIN MCJ_001850 [Mycoplasma conjunctivae]
Length = 359
Score = 39.3 bits (90), Expect = 0.67, Method: Composition-based stats.
Identities = 45/284 (15%), Positives = 93/284 (32%), Gaps = 12/284 (4%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGAN-------LAGFLGAHQFVP 60
+ DI+ +E + ++ + L+S P + + +
Sbjct: 59 LRDIVKKTLEKTSNKTFAIISVSQAFYILVSFIPILTLITILLLFLSKIVPSFVHNGKEW 118
Query: 61 TVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA----YFSSNGVEALRISL 116
D + I I + V +K + I+ LA +NG
Sbjct: 119 KFYDFIISEVLNKFIPGIQQSISFINNVTSKSMTNIAFLALLGSSFLIGANGYSRFINYY 178
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+ +Y + +++I +L SF ++ + I ++ + Y FF + I
Sbjct: 179 SLSYNHTDPINFWILKLKSFLIIIGIVIITTIFIYLSSLLFFVFKYWSLFFKSSILFYNI 238
Query: 177 IW-NGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTF 235
+ +L F+ + +LP+ K I PGV S V LF+ ++
Sbjct: 239 FFYFSSFVLLLLFFFVSSFLLLKYLPSFKLNRKWITPGVWIMMSSNTVFTFLFSLLVLNG 298
Query: 236 STYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRK 279
+ ++ + F + F+ N S ++RK
Sbjct: 299 WINYDKFGSTSTFLYLSTFSLYISQFYHFSIITNYSYSQKFFRK 342
>gi|23011363|ref|ZP_00051745.1| hypothetical protein Magn03006001 [Magnetospirillum magnetotacticum
MS-1]
Length = 57
Score = 39.3 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 249 MTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + ++++ +LGAELNA M R
Sbjct: 2 IGFMTWIWLSTTVVLLGAELNAEMEHQTAR 31
>gi|198423408|ref|XP_002119703.1| PREDICTED: similar to receptor for egg jelly 6, partial [Ciona
intestinalis]
Length = 4589
Score = 38.9 bits (89), Expect = 0.83, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 49/149 (32%), Gaps = 7/149 (4%)
Query: 92 GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSF 151
G + + F + + L + + I F L++ I
Sbjct: 4259 GKGLLLVITYIIFVLVLLYKIFNILKSIKEIRWKYFHHFWNWIDFISALMSITASGIYGV 4318
Query: 152 VFVAIPLALAYVRKF-----FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
++ + L + + F L+L R + + F + F L + +
Sbjct: 4319 RYIHSHIILDKITQDVDKETFVNFQYLILWNDIFRFLMSFILFFATIKFTRLLRFNRRIR 4378
Query: 207 IMSILPGVIFTWISWVVGAVLFTHYIVTF 235
++S+ + V+ +V+F+ Y + F
Sbjct: 4379 LLSMTL--SYAAKPVVLFSVMFSIYFLGF 4405
>gi|212529962|ref|XP_002145138.1| Na+/H+ antiporter Nha1 [Penicillium marneffei ATCC 18224]
gi|210074536|gb|EEA28623.1| Na+/H+ antiporter Nha1 [Penicillium marneffei ATCC 18224]
Length = 1088
Score = 38.9 bits (89), Expect = 0.84, Method: Composition-based stats.
Identities = 26/196 (13%), Positives = 54/196 (27%), Gaps = 19/196 (9%)
Query: 40 FPFIVFGANLAGFLGAHQ-----------FVPTVIDVVFGAWPEVIAKPITDEILQVLAV 88
FPFI ++ + + V+G IA+ + + +
Sbjct: 181 FPFIYIALSIIKYRSHANEVALHWICNTILYECIAGAVYGFLVGYIARHMIKYAEKKNLI 240
Query: 89 PAKGLFTISALAAAY----FSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASV 144
+ + A + S+ G++ L I + S + +
Sbjct: 241 DRESFLVFYFVLALFCAGSGSTLGMDDLLIGFAAGVGFSNDGWFTAKTEESHVSNV---I 297
Query: 145 TLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAK 204
L++ FV + + P LG + + I ++ + +P K
Sbjct: 298 DLLLNLAYFVYFGAIIPWSSYNMPELGMVPWRLVVIAILVIFFRRIPIMMILKPIIPDVK 357
Query: 205 SKIMSILPGVIFTWIS 220
L F I
Sbjct: 358 -TWREALFAGHFGPIG 372
>gi|331698969|ref|YP_004335208.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
gi|326953658|gb|AEA27355.1| ribonuclease BN [Pseudonocardia dioxanivorans CB1190]
Length = 291
Score = 38.9 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 22/235 (9%), Positives = 60/235 (25%), Gaps = 21/235 (8%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
+ F DG+ A ++ A +++ P ++ ++ +
Sbjct: 25 RVLARFTAIDGYDRALALAAQAFVTLVPMLMVVVATVPPARRASLGDQLVANLG---LSG 81
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
A + +L+ A+ ++ + A+ +
Sbjct: 82 DAAAVVLGLLRTGGEVTAPATAAGAVVLVVSLVGFTRTMQRAFVAAWGLPAP-------- 133
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + + LA L + A + +
Sbjct: 134 ---------GLAGLWPGLLGATALLAEVVAVVVLSPLLGVFTGSALIAAVAHAVGAALLW 184
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLAS 247
V + + ++LPG I T + + + Y+ + + Y +
Sbjct: 185 WPVQYLMLGRRIGPRALLPGTIVTGLGQLAVITVSDIYLPPVAAHQADRYGLIGI 239
>gi|291295464|ref|YP_003506862.1| ribonuclease BN [Meiothermus ruber DSM 1279]
gi|290470423|gb|ADD27842.1| ribonuclease BN [Meiothermus ruber DSM 1279]
Length = 297
Score = 38.9 bits (89), Expect = 0.85, Method: Composition-based stats.
Identities = 45/292 (15%), Positives = 90/292 (30%), Gaps = 24/292 (8%)
Query: 8 VFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL--GAHQFVPTVIDV 65
+ II + + A+ ++ AL S+ P ++ A + GF+ G V+
Sbjct: 1 MLHIIGQVYQLYTRSHIPFFAAALAYYALFSLMPLLILLAGVFGFVLSGNEGLRNAVLVR 60
Query: 66 VFGA--WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ + ++ L A L S L + SSN AL +L + V
Sbjct: 61 LIELVVLLFPTQPDLAQTLVNFLTRGAFPLTLASLLVLLWASSNFFAALAYALGIIFGGV 120
Query: 124 EMRSWYITR--------------------LISFGYVLLASVTLVIMSFVFVAIPLALAYV 163
R L + + + +++ + + L +
Sbjct: 121 APRPEPAIPPTPTAKARPPQRAFGRAAALLTALRGRIAGLLAPLLLGLALILLALLGLVM 180
Query: 164 RKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVV 223
L L + NG + + L F+ L + +
Sbjct: 181 GFVLRYLPAELSFLRNGTEVVVPILGAMLLFFLTYMLLPIPTPRVLAAMAAATLAALAWE 240
Query: 224 GAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNASMIIY 275
G L ++ + Y +Y +A + LV Y+ ++GA L ++
Sbjct: 241 GLRLGLPLLLPRTQYELIYGPIAGFLLALVGFYLTMWILLVGAVLAKALTER 292
>gi|258596971|ref|XP_001347319.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
gi|254922375|gb|AAN35232.2| conserved Plasmodium protein [Plasmodium falciparum 3D7]
Length = 1272
Score = 38.9 bits (89), Expect = 0.86, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 8/133 (6%)
Query: 138 YVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVH 197
Y+ + ++ + ++ + +V +L I++ I T I F
Sbjct: 47 YLWALCLGTLLFIYSLISFVVIRTFVLSKIDIGKYVLEILFFISIIVTCTLSLIIDSF-- 104
Query: 198 LFLPAAKSKIMSILPG-VIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
L G + I+ +V I Y+ + + L F+
Sbjct: 105 KIANMQLLFFSFALTGYAYYNLITLFFFSVAAGILI----QYNLNIGSFGADIDALFFID 160
Query: 257 MLGVFF-ILGAEL 268
+L I+G +
Sbjct: 161 LLSYILQIIGGNI 173
>gi|67539430|ref|XP_663489.1| hypothetical protein AN5885.2 [Aspergillus nidulans FGSC A4]
gi|40739204|gb|EAA58394.1| hypothetical protein AN5885.2 [Aspergillus nidulans FGSC A4]
gi|259479948|tpe|CBF70637.1| TPA: alpha-1,3 glucan synthase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 2387
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 14/205 (6%), Positives = 55/205 (26%), Gaps = 10/205 (4%)
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
G Q + + + + + + D + + + G+
Sbjct: 2102 GTQQAYIIGLWYWGTSISQAVTRGVPDVQAHITETWRMTTICMPIAVFLWV--LGILVFF 2159
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLL-ASVTLVIMSFVFVAIPLALAYVRKFFPALGN 172
N + + + +L V ++ F+ +++ A
Sbjct: 2160 GLPNYYRQTPGKVPSFYQSVCRRKIILWNFVVVILQNFFLSAPYGRNWSFLWSSVHAEPW 2219
Query: 173 LLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYI 232
+ ++ + + + + + G W + ++
Sbjct: 2220 HIGLLVVAFFGVAWVLILCIFARLSKSHSWI-LPVFACGLGAPRWAQIWWGVS-GMGLFL 2277
Query: 233 VTFSTYSTMYAGLASIMTCLVFLYM 257
+Y+T ++++ ++L++
Sbjct: 2278 PWAGSYTT-----GALVSRSLWLWL 2297
>gi|227874372|ref|ZP_03992556.1| hypothetical protein HMPREF6123_2495 [Oribacterium sinus F0268]
gi|227839780|gb|EEJ50226.1| hypothetical protein HMPREF6123_2495 [Oribacterium sinus F0268]
Length = 447
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 20/255 (7%), Positives = 65/255 (25%), Gaps = 15/255 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ F E+ + LS ++ L + +I
Sbjct: 6 MRRVARKFWRENW--------FTIFLSYIAGLLGFVLLTMLFS--SLLNPLILFTGDFSL 55
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYIT 131
+ + I + +L + + + + + + + ++
Sbjct: 56 GELRRGIGLSLTGILFALYVFVCIFYFIVLGFSFRKMLLEMSRGEKKVNAAMIFYGFHPN 115
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFI 191
G +L S+ + S V + Y + + + I+ ++
Sbjct: 116 SFPLLGRMLGFSILAFLFSTVISLGQEVIDYFLGEGLIYWSYYGVSFAVLIFFSLFFDMT 175
Query: 192 GLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA----S 247
+ + V+ +L+ + + + + + +
Sbjct: 176 FFTVWDGEGNSLWQNMKK-SVAVMKGQKFSYFRQILYFSLVTSVAGFIAVMWSFILKSPA 234
Query: 248 IMTCLVFLYMLGVFF 262
+ ++FLY+
Sbjct: 235 LPIFVLFLYLSIYLL 249
>gi|77118354|ref|YP_337905.1| polyprotein 1ab [Breda virus]
gi|190360103|sp|P0C6V8|R1AB_BRV1 RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:
Full=ORF1ab polyprotein; Contains: RecName:
Full=Non-structural protein 1; Short=nsp1; Contains:
RecName: Full=Non-structural protein 2; Short=nsp2;
Contains: RecName: Full=Non-structural protein 3;
Short=nsp3; Contains: RecName: Full=3C-like serine
proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName:
Full=nsp4; AltName: Full=p27; Contains: RecName:
Full=Non-structural protein 5; Short=nsp5; Contains:
RecName: Full=Non-structural protein 6; Short=nsp6;
Contains: RecName: Full=Non-structural protein 7;
Short=nsp7; Contains: RecName: Full=Non-structural
protein 8; Short=nsp8; Contains: RecName:
Full=Non-structural protein 9; Short=nsp9; Contains:
RecName: Full=RNA-directed RNA polymerase; Short=Pol;
Short=RdRp; AltName: Full=nsp11; AltName: Full=p100;
Contains: RecName: Full=Helicase; Short=Hel; AltName:
Full=nsp12; AltName: Full=p67; Contains: RecName:
Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp13;
Contains: RecName: Full=Non-structural protein 14;
Short=nsp14; Contains: RecName: Full=Uridylate-specific
endoribonuclease; AltName: Full=NendoU; AltName:
Full=nsp15; Contains: RecName: Full=Putative 2'-O-methyl
transferase; AltName: Full=nsp16
gi|42495717|gb|AAS17963.1| polyprotein 1ab [Breda virus]
Length = 6733
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 14/144 (9%)
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E+ TRL + + +A F L + +++++
Sbjct: 2910 FEVEHSTHTRLCYVTGTNIVECLPTFEIISPYVFVVLVAIFTIVFLFLLRMYIVMYSYFK 2969
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T + + + + L ++PGV+F W+ +V+F Y+ S
Sbjct: 2970 VFTYVVFKLLFVNTVMVLFVVCLP--PLVPGVVFVLALWLCDSVVFLLYLAVLS------ 3021
Query: 243 AGLASIMTCLVFLYMLGVFFILGA 266
+ L + Y++ I+G
Sbjct: 3022 ------LFILPWFYVMLFVLIVGG 3039
>gi|225556016|gb|EEH04306.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 576
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 46/148 (31%), Gaps = 4/148 (2%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSF 151
T + S+ + + ++L SF VL + + +S
Sbjct: 303 LTTGFCGSLTSFSSFMLDVFLALANDLPTPGHPESPVPRNGGYSFMAVLAIIIYTLSLSI 362
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL--FIGLIFVHLFLPAAKSKIMS 209
+ + LA + + + + + LA+ ++G +F+ ++ P +
Sbjct: 363 GALILGSHLAIFMDKYTPVIPYIFSRRYVDPFISFLAMGSWLGAVFLAIWPPDRSLGVRE 422
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFST 237
G + + LF Y+
Sbjct: 423 HWRGSAMFAVVFAPLGCLFRFYVSLLLN 450
>gi|154275988|ref|XP_001538839.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413912|gb|EDN09277.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 576
Score = 38.5 bits (88), Expect = 1.1, Method: Composition-based stats.
Identities = 15/149 (10%), Positives = 53/149 (35%), Gaps = 6/149 (4%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
T + S + + ++L + + R +G++ + ++ ++ +
Sbjct: 303 LTTGFCGSLTSFSTFMLDVFLALANDLPTPGHPASPVPRNGGYGFMAVLAI-IIYTLSLS 361
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-----FIGLIFVHLFLPAAKSKIM 208
+ + +++ F ++ I++ R ++ ++G +F+ ++ P +
Sbjct: 362 IGALILGSHLAIFMDKYTPVIPYIFSRRYVDPFISFLAMGSWLGAVFLAIWPPDRSLGVR 421
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFST 237
G + + + LF Y+
Sbjct: 422 EHWRGSVVFAVVFAPLGCLFRFYVSLLLN 450
>gi|312278458|gb|ADQ63115.1| Cation-transporting ATPase PacL [Streptococcus thermophilus ND03]
Length = 894
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 20/190 (10%), Positives = 53/190 (27%), Gaps = 5/190 (2%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
FI+F A L G+ I++V P + + ++ +G +
Sbjct: 695 FIIFFATLFGWDVLQPVHLLWINLVTDTLPAIALG-VEPAEPGIMTHKPRGRQSNFFDGG 753
Query: 102 AYFSSNGVEALRISLNRA---YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ + + L A + +V + + + + +I +
Sbjct: 754 VFGAIMYQGVFQTILVLAVYGWGLVFPEHHTQAEIHADALTMAYATLGLIQLLHAFNVKS 813
Query: 159 ALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
V K I I + G + + ++ ++++ G
Sbjct: 814 VYQSVFKVGLFRNKTFNWAIPVAFILLMATIVVPGFNNLFHVSHLSFTQWLAVMVGSFLI 873
Query: 218 WISWVVGAVL 227
+ + +
Sbjct: 874 VVLVEIVKAI 883
>gi|326431335|gb|EGD76905.1| hypothetical protein PTSG_08250 [Salpingoeca sp. ATCC 50818]
Length = 561
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 53/172 (30%), Gaps = 10/172 (5%)
Query: 111 ALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPAL 170
+ N + R + + + + + + + A L
Sbjct: 34 TMLTGSNSSKRPKDPIAHARQLESRRDAAVSIAFFVACALILVLCKQHLSAAGAVAIAFL 93
Query: 171 GNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
G + W ++A+ ++ + + +P +S + V A++ T
Sbjct: 94 GLPVTFFWAAFTVLLVMAVLNIIMAILVVVPLQYFPDISAGTSAKSRKLRLVATAMVMTI 153
Query: 231 YIVTFSTYSTMYA--GLASIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
++ S Y L++ + L+++ + L A + + +K
Sbjct: 154 FL------SAYYGIHALSTFVAVLIWI--IAFVLFLIAAFVGELARNFIGRK 197
>gi|126316406|ref|XP_001380619.1| PREDICTED: similar to MARVEL domain containing 2 [Monodelphis
domestica]
Length = 532
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 44/129 (34%), Gaps = 29/129 (22%)
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+L++ T++ L +G+ + + +L + + + LF Y
Sbjct: 236 PFVLVVAGLAWVVTVILLVLGMSMYYRTI---------LLDAGWWPLTEFGINVALFVLY 286
Query: 232 IVTFSTY----------------STMYAGL----ASIMTCLVFLYMLGVFFILGAELNAS 271
+ Y + + A + ++FL++ + +++GA +
Sbjct: 287 MAAAIVYVNDTNRGGLCYYPLFNTPLNASFCRVEGGQIAAMIFLFVTMIVYLIGAVVCLK 346
Query: 272 MIIYYWRKK 280
+ + ++
Sbjct: 347 LWRHEAARR 355
>gi|297162454|gb|ADI12166.1| integral membrane protein [Streptomyces bingchenggensis BCW-1]
Length = 248
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 23/243 (9%), Positives = 59/243 (24%), Gaps = 31/243 (12%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
E + A + L++ P ++ A + G
Sbjct: 3 RGWRRGSEFELLHRAMGFAALGFLTLVPLLIVVAAADPV----NRQGFAQWLAEGLGVSD 58
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
++ + + F A++ + + + R I R
Sbjct: 59 GSRDEVRRLFAPPRQALETTTAFGLATLCVFGLRFGAAVQTGYEKVWELPPGRWHTIWRH 118
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
+ + VL+ + L R+ +
Sbjct: 119 LVWLAVLIGYLLLSSHLG--------------------------PGWRLGIGIGGTVTFF 152
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCL 252
+ L + ++LPG + T I + ++ + Y + +++
Sbjct: 153 WWSQHVLLGGRIGWGALLPGALATGIGLFGLRIFSRLVFSPLIASSAVSYGPVGTVLVVQ 212
Query: 253 VFL 255
+L
Sbjct: 213 SWL 215
>gi|190360102|sp|P0C6V7|R1AB_BEV RecName: Full=Replicase polyprotein 1ab; Short=pp1ab; AltName:
Full=ORF1ab polyprotein; Contains: RecName:
Full=Non-structural protein 1; Short=nsp1; Contains:
RecName: Full=Non-structural protein 2; Short=nsp2;
Contains: RecName: Full=Non-structural protein 3;
Short=nsp3; Contains: RecName: Full=3C-like serine
proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName:
Full=nsp4; AltName: Full=p27; Contains: RecName:
Full=Non-structural protein 5; Short=nsp5; Contains:
RecName: Full=Non-structural protein 6; Short=nsp6;
Contains: RecName: Full=Non-structural protein 7;
Short=nsp7; Contains: RecName: Full=Non-structural
protein 8; Short=nsp8; Contains: RecName:
Full=Non-structural protein 9; Short=nsp9; Contains:
RecName: Full=RNA-directed RNA polymerase; Short=Pol;
Short=RdRp; AltName: Full=nsp11; AltName: Full=p100;
Contains: RecName: Full=Helicase; Short=Hel; AltName:
Full=nsp12; AltName: Full=p67; Contains: RecName:
Full=Exoribonuclease; Short=ExoN; AltName: Full=nsp13;
Contains: RecName: Full=Non-structural protein 14;
Short=nsp14; Contains: RecName: Full=Uridylate-specific
endoribonuclease; AltName: Full=NendoU; AltName:
Full=nsp15; Contains: RecName: Full=Putative 2'-O-methyl
transferase; AltName: Full=nsp16
Length = 6857
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 20/143 (13%)
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R Y T S + + + V I + + + ++ ++
Sbjct: 3037 HTRVCYTTGSNSVECLPTFEIISPYVFVFIVVIFTVIFLILIRLYIVMYSYFKVFTYVVF 3096
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ I ++FV P ++PGV+F W+ +V+F Y+ S
Sbjct: 3097 KLLFVNIIMVLFVVCLPP--------LVPGVVFVLALWLCDSVMFLLYLAFLS------- 3141
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
+ L + Y+L F++G
Sbjct: 3142 -----LFILPWFYVLFFLFMVGG 3159
>gi|195056580|ref|XP_001995125.1| GH22978 [Drosophila grimshawi]
gi|193899331|gb|EDV98197.1| GH22978 [Drosophila grimshawi]
Length = 1311
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 33/257 (12%), Positives = 74/257 (28%), Gaps = 39/257 (15%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
G + S L++FP+++ L + ++ V ++ + +
Sbjct: 932 GIRSSGKASYF--LALFPYVIMLILLIRAVTLPGAWQGILYFVQ----PQWSQLLNPHVW 985
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ + A F + + A S N + V IT + SF +L
Sbjct: 986 Y------SAITQMFFSLAICFGTLIMYA---SFNDFNKRVHKDVIIITTIDSFTSMLAGC 1036
Query: 144 VTLVIMSFV-----------FVAIPLALAYVRKF-----FPALGNLLLIIWNGRIYATML 187
+ I+ + V LA++ F L L +++ + +
Sbjct: 1037 IIFGILGNLAYETNTTDISQVVKGGAGLAFISYPEAIAKFKYLPQLFAVLFFFMLLVLGI 1096
Query: 188 ALFIGLIFVHLFLPAAK---SKIMSILPGVIFTWI--SWVVGAVLFTHYIVTFSTYSTMY 242
IG+ + + + + G V + Y +
Sbjct: 1097 GSNIGMASCVINVVKDRFPHLPHWQLAIGASLIGFVCGLVYMTPGGQFVLNLVDFYGCTF 1156
Query: 243 AGLASIMTCLV---FLY 256
L + L+ ++Y
Sbjct: 1157 IALVLAIAELLAVCWIY 1173
>gi|302539958|ref|ZP_07292300.1| putative integral membrane protein [Streptomyces hygroscopicus ATCC
53653]
gi|302457576|gb|EFL20669.1| putative integral membrane protein [Streptomyces himastatinicus
ATCC 53653]
Length = 288
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 29/243 (11%), Positives = 70/243 (28%), Gaps = 30/243 (12%)
Query: 14 DAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEV 73
E + A + L++ P ++ A +
Sbjct: 35 RGWRRGSEFELMHRALGFAALGFLTLVPLLIVVAA-----ADPVNRHGFAQWLAEGLGVS 89
Query: 74 IAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRL 133
DE+L + A P + L T +A A + G+ + +V E+ +
Sbjct: 90 ATS--RDEVLDLFAPPRRSLETTTAFGLATLALFGLTFCGVVQTGYEKVWELPPGRWHTV 147
Query: 134 ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGL 193
L+ + +++S P R+ ++A +
Sbjct: 148 WRHLVWLIVLIGYLLLSSHLGPGPT----------------------RVAVAVVATVLFF 185
Query: 194 IFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCL 252
+ L + ++LPG + T + + ++ + Y + +++
Sbjct: 186 WWSQRLLLGGRISWGALLPGALATGVGLWGLRIFSRLVFSPLIASSAVSYGPVGTVLVVQ 245
Query: 253 VFL 255
+L
Sbjct: 246 SWL 248
>gi|41469524|gb|AAS07290.1| putative mechanosensitive ion channel protein [Oryza sativa
Japonica Group]
Length = 661
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 53/189 (28%), Gaps = 5/189 (2%)
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
D +L A + A + + +R + + ++ I+ +
Sbjct: 100 DTLLANPATALVVPAIGIIVFALWGFLPLMRDIRNRFDHGGNWKKSPTYLISTSYLQPLL 159
Query: 140 LLASVTLVIMSFVFVAIPLA-LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHL 198
L TL+ + V +P A V+ L + T L + + +
Sbjct: 160 LWTGATLICRALDPVVLPSAASQAVKTRLVTFVRSLSTVLAIAYILTSLIQQLQKFLMDM 219
Query: 199 FLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCL----VF 254
P ++ W+ LF + + G +++ L +F
Sbjct: 220 RNPNDSRRMGFDFAVKAVYTGIWIAAISLFMELLGFNTQKWITAGGFGTVLLTLAGREIF 279
Query: 255 LYMLGVFFI 263
L I
Sbjct: 280 TNFLSSVMI 288
>gi|240278496|gb|EER42002.1| chromosome condensation protein [Ajellomyces capsulatus H143]
gi|325090588|gb|EGC43898.1| chromosome condensation protein [Ajellomyces capsulatus H88]
Length = 576
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 45/148 (30%), Gaps = 4/148 (2%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSF 151
T + S + + ++L SF VL + + +S
Sbjct: 303 LTTGFCGSLTSFSTFMLDVFLALANDLPTPGHPESPVPRNGGYSFMAVLAIIIYTLSLSI 362
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL--FIGLIFVHLFLPAAKSKIMS 209
+ + LA + + + + + LA+ ++G +F+ ++ P +
Sbjct: 363 GALILGSHLAIFMDKYTPVIPYIFSRRYVDPFISFLAMGSWLGAVFLAIWPPDRSLGVRE 422
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFST 237
G + + LF Y+
Sbjct: 423 HWRGSAVFAVVFAPLGCLFRFYVSLLLN 450
>gi|227510840|ref|ZP_03940889.1| phage infection protein [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227189693|gb|EEI69760.1| phage infection protein [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 721
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 17/187 (9%), Positives = 54/187 (28%), Gaps = 11/187 (5%)
Query: 33 LSALLSVFPFIVFGANLAGF---------LGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
LS++ I+ + + + + + + + +
Sbjct: 525 FYTTLSIWIGILLLTTIISWKYRSKKNERFPRANLIEKYVGKLLLYLSISLTQTTFTMLG 584
Query: 84 QVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
++ + + + + LA AY ++ + +L + V + +I
Sbjct: 585 ELFILGIRPVSVWAMLATAYTATIVFTIMMYTLVYMFGNVGKVISVLLMIIQLFGTGGIY 644
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
I ++ + L + + I + ++ ++ + F+ L P
Sbjct: 645 PLETIPPYLAA-LAPYLPFTYAIQGFREAIAGPIPSVFWHSLLVLSGFAIAFL-LIAPLR 702
Query: 204 KSKIMSI 210
+ I
Sbjct: 703 RVFQKPI 709
>gi|55823072|ref|YP_141513.1| calcium transporter P-type ATPase [Streptococcus thermophilus
CNRZ1066]
gi|55739057|gb|AAV62698.1| calcium transporter P-type ATPase [Streptococcus thermophilus
CNRZ1066]
Length = 894
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 20/189 (10%), Positives = 52/189 (27%), Gaps = 5/189 (2%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
FI+F A L G+ I++V P + + ++ +G +
Sbjct: 695 FIIFFATLFGWDVLQPVHLLWINLVTDTLPAIALG-VEPAEPGIMTHKPRGRQSNFFDGG 753
Query: 102 AYFSSNGVEALRISLNRA---YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ + + L A + +V + + + + +I +
Sbjct: 754 VFGAIMYQGVFQTILVLAVYGWGLVFPEHHTQAEIHADALTMAYATLGLIQLLHAFNVKS 813
Query: 159 ALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
V K I I + G + + ++ ++++ G
Sbjct: 814 VYQSVFKVGLFRNKTFNWAIPVAFILLMATIVVPGFNNLFHVSHLSFTQWLAVIVGSFLI 873
Query: 218 WISWVVGAV 226
+ +
Sbjct: 874 VVLVEIVKA 882
>gi|55821161|ref|YP_139603.1| Ca2+, Mn2+-P-type ATPase [Streptococcus thermophilus LMG 18311]
gi|55737146|gb|AAV60788.1| Ca2+, Mn2+-P-type ATPase [Streptococcus thermophilus LMG 18311]
Length = 894
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 20/189 (10%), Positives = 51/189 (26%), Gaps = 5/189 (2%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
FI+F A L G+ I++V P + + ++ G +
Sbjct: 695 FIIFFATLFGWDVLQPVHLLWINLVTDTLPAIALG-VEPAEPGIMTHKPHGRQSNFFDGG 753
Query: 102 AYFSSNGVEALRISLNRA---YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ + + L A + +V + + + + +I +
Sbjct: 754 VFGAIMYQGVFQTILVLAVYGWGLVFPEHHTQAEIHADALTMAYATLGLIQLLHAFNVKS 813
Query: 159 ALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
V K I I + G + + ++ ++++ G
Sbjct: 814 VYQSVFKVGLFRNKTFNWAIPVAFILLMATIVVPGFNNLFHVSHLSFTQWLAVIVGSFLI 873
Query: 218 WISWVVGAV 226
+ +
Sbjct: 874 VVLVEIVKA 882
>gi|213029713|ref|ZP_03344160.1| hypothetical protein Salmonelentericaenterica_49266 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 69
Score = 38.1 bits (87), Expect = 1.5, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 11 IIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFL 53
+ A E F + G + I+ + LS+ P ++ AGF+
Sbjct: 25 HLIRATERFNDRLGNQFGAAITYFSFLSMIPIMMVSFAAAGFI 67
>gi|190360131|sp|P0C6F3|R1A_BEV RecName: Full=Replicase polyprotein 1a; Short=pp1a; AltName:
Full=ORF1a polyprotein; Contains: RecName:
Full=Non-structural protein 1; Short=nsp1; Contains:
RecName: Full=Non-structural protein 2; Short=nsp2;
Contains: RecName: Full=Non-structural protein 3;
Short=nsp3; Contains: RecName: Full=3C-like serine
proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName:
Full=nsp4; AltName: Full=p27; Contains: RecName:
Full=Non-structural protein 5; Short=nsp5; Contains:
RecName: Full=Non-structural protein 6; Short=nsp6;
Contains: RecName: Full=Non-structural protein 7;
Short=nsp7; Contains: RecName: Full=Non-structural
protein 8; Short=nsp8; Contains: RecName:
Full=Non-structural protein 9; Short=nsp9; Contains:
RecName: Full=Non-structural protein 10; Short=nsp10
gi|83628256|gb|ABC26008.1| replicase polyprotein 1a [Equine torovirus]
Length = 4569
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 20/143 (13%)
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIY 183
R Y T S + + + V I + + + ++ ++
Sbjct: 3037 HTRVCYTTGSNSVECLPTFEIISPYVFVFIVVIFTVIFLILIRLYIVMYSYFKVFTYVVF 3096
Query: 184 ATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYA 243
+ I ++FV P ++PGV+F W+ +V+F Y+ S
Sbjct: 3097 KLLFVNIIMVLFVVCLPP--------LVPGVVFVLALWLCDSVMFLLYLAFLS------- 3141
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
+ L + Y+L F++G
Sbjct: 3142 -----LFILPWFYVLFFLFMVGG 3159
>gi|311696699|gb|ADP99572.1| multi-sensor hybrid histidine kinase [marine bacterium HP15]
Length = 1166
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 50/213 (23%), Gaps = 11/213 (5%)
Query: 50 AGFLGAHQFVPTV-IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNG 108
++ V +D + I L V + L + +
Sbjct: 176 ISLWHPDSYIEKVSVDELVRGILLGSVLAILAYNLFVAVSVRERSNIYYVLYLVFAAIFI 235
Query: 109 VEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFP 168
+ + + + +R
Sbjct: 236 FTEQVHGIQLLDSRPALFDKQFLHFQIILTWFWGLLMARSLLETRERSADLDQVIRLCLY 295
Query: 169 ALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA-KSKIMSILPGVIFTWISWVVGAVL 227
++ ++ + M + +G I + L L P + +W + V
Sbjct: 296 SVVATFVLSLFLPYHVAMEWIVVGSILLSLILIVVSYLSWRYYNPAARSYFFAWTLALVG 355
Query: 228 FTHY---------IVTFSTYSTMYAGLASIMTC 251
F Y + TF+ YS + A I+
Sbjct: 356 FGIYALTVMGILPLNTFTAYSPQFGLTAQIILF 388
>gi|114766804|ref|ZP_01445738.1| putative Na+/H+ antiporter with cyclic nucleotide-binding domain
[Pelagibaca bermudensis HTCC2601]
gi|114540998|gb|EAU44056.1| putative Na+/H+ antiporter with cyclic nucleotide-binding domain
[Roseovarius sp. HTCC2601]
Length = 844
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 11/188 (5%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTI 96
LS FP ++ G L+G+L A V + + + + A + G +
Sbjct: 200 LSQFPLLIVGGALSGWLLARIAVRLMGLFGRYELAQQSISVALPYLAYITAEQSIGASGV 259
Query: 97 SALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAI 156
A+ AA + N V + T L +L +I + I
Sbjct: 260 IAVVAAGLTLNIV-----------GPGRLPPEAWTNLREVWDLLAHWAGALIFILAALLI 308
Query: 157 PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIF 216
P L R L ++++ + + + + L P + +IL G +
Sbjct: 309 PRMLEEFRLSDAGLVLVVVLAAIAARAFILFLVLPIMGRLRLSPPVERPYRSAILWGGLR 368
Query: 217 TWISWVVG 224
++ +
Sbjct: 369 GAVTLALA 376
>gi|77118349|ref|YP_337906.1| replicase [Breda virus]
gi|190360132|sp|P0C6F4|R1A_BRV1 RecName: Full=Replicase polyprotein 1a; Short=pp1a; AltName:
Full=ORF1a polyprotein; Contains: RecName:
Full=Non-structural protein 1; Short=nsp1; Contains:
RecName: Full=Non-structural protein 2; Short=nsp2;
Contains: RecName: Full=Non-structural protein 3;
Short=nsp3; Contains: RecName: Full=3C-like serine
proteinase; Short=3CLSP; AltName: Full=M-PRO; AltName:
Full=nsp4; AltName: Full=p27; Contains: RecName:
Full=Non-structural protein 5; Short=nsp5; Contains:
RecName: Full=Non-structural protein 6; Short=nsp6;
Contains: RecName: Full=Non-structural protein 7;
Short=nsp7; Contains: RecName: Full=Non-structural
protein 8; Short=nsp8; Contains: RecName:
Full=Non-structural protein 9; Short=nsp9; Contains:
RecName: Full=Non-structural protein 10; Short=nsp10
gi|42495712|gb|AAS17958.1| replicase [Breda virus]
Length = 4445
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 14/144 (9%)
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
E+ TRL + + +A F L + +++++
Sbjct: 2910 FEVEHSTHTRLCYVTGTNIVECLPTFEIISPYVFVVLVAIFTIVFLFLLRMYIVMYSYFK 2969
Query: 183 YATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY 242
T + + + + L ++PGV+F W+ +V+F Y+ S
Sbjct: 2970 VFTYVVFKLLFVNTVMVLFVVCLP--PLVPGVVFVLALWLCDSVVFLLYLAVLS------ 3021
Query: 243 AGLASIMTCLVFLYMLGVFFILGA 266
+ L + Y++ I+G
Sbjct: 3022 ------LFILPWFYVMLFVLIVGG 3039
>gi|163839061|ref|YP_001623466.1| hypothetical protein RSal33209_0296 [Renibacterium salmoninarum
ATCC 33209]
gi|162952537|gb|ABY22052.1| conserved hypothetical membrane protein [Renibacterium salmoninarum
ATCC 33209]
Length = 183
Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 58/168 (34%), Gaps = 2/168 (1%)
Query: 101 AAYFSSNGVEALRISLNRAYRVVE-MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
S + LR + + + + +L +L+ + LV S + V + A
Sbjct: 1 MLLTSLGWIGGLREGIRGIFATGPLEANPVLLKLKDAATLLVLGILLVATSVISVGVVTA 60
Query: 160 LAYVRKFFPALGNLL-LIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTW 218
L V L I + +L + + + A + +++ +
Sbjct: 61 LDGVMAALSLDVELARPITYVASFVVLLLLDLAVCMALFRSVSAIQMPRVALWQTALIAA 120
Query: 219 ISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGA 266
+ V L + + + + + A + I+ V+ Y+L +++ A
Sbjct: 121 VGSTVLRALSSVLLANVAGKNPLLAPFSVILGLFVWFYLLSQVYLIAA 168
>gi|116627877|ref|YP_820496.1| cation transport ATPase [Streptococcus thermophilus LMD-9]
gi|116101154|gb|ABJ66300.1| Cation transport ATPase [Streptococcus thermophilus LMD-9]
Length = 894
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 21/190 (11%), Positives = 54/190 (28%), Gaps = 5/190 (2%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
FI+F A L G+ I++V P + + ++ +G +
Sbjct: 695 FIIFFATLFGWDVLQPVHLLWINLVTDTLPAIALG-VEPAEPGIMTHKPRGRQSNFFDGG 753
Query: 102 AYFSSNGVEALRISLNRA---YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ + + L A + +V + + + + +I +
Sbjct: 754 VFGAIMYQGVFQTILVLAVYGWGLVFPEHHTQAEIHADALTMAYATLGLIQLLHAFNVKS 813
Query: 159 ALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
V K I I + GL + + ++ ++++ G
Sbjct: 814 VYQSVFKVGLFRNKTFNWAIPVAFILLMATIVVPGLNNLFHVSHLSFTQWLAVIVGSFLI 873
Query: 218 WISWVVGAVL 227
+ + +
Sbjct: 874 VVLVEIVKAI 883
>gi|168010512|ref|XP_001757948.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690825|gb|EDQ77190.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 523
Score = 37.7 bits (86), Expect = 2.1, Method: Composition-based stats.
Identities = 17/235 (7%), Positives = 61/235 (25%), Gaps = 4/235 (1%)
Query: 31 ISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
++ + +++ ++ ++ + + + + + +++ +
Sbjct: 213 MTFYSFMALAYGLLGAFWFFQYMRNWKDILQLQNCISAVIALGMSEMALWYFDYLNFNMT 272
Query: 91 KGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
+ A + + + L + +R +
Sbjct: 273 GSRPMGITMWAVTVGAVKKTVSRLLILVVSMGFGVVRPTLGGLTSKVLLLGGTYFLAAES 332
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMS 209
V + K L + ++ I T +L L + AK ++
Sbjct: 333 LDVVENVNTINDPPGKERLFLVLPVAMLDALFILWTFTSLSRTLEKLQARRRFAKLELYR 392
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
+ + V + + Y + + I + Y+L ++
Sbjct: 393 KFTNSLAMAVVVSVAWIGYELYFKATDPFGERWQSFWVIPAF--W-YVLAFILLI 444
>gi|289806370|ref|ZP_06536999.1| putative ribonuclease [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 167
Score = 37.3 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 17/159 (10%), Positives = 47/159 (29%), Gaps = 8/159 (5%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
+ + + + + + + A Y N + LR +
Sbjct: 9 PNLLEDIFSKILMNVSDPTLASTLKNTINTAVQQRTTVGLVGLGIALYSGVNWMGNLREA 68
Query: 116 LNRAYRVVEMR------SWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRK--FF 167
+ R V R ++ L F ++ + L+I + A + +
Sbjct: 69 IRAQSRDVWERKPQDQEKIWLKYLRDFISLIGLLIALIITLSITSIAGSAQQMIISALYL 128
Query: 168 PALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK 206
++ L + ++ A ++ ++ LP ++
Sbjct: 129 DSIEWLKPAWHLIGLAISIFANYLLFFWIFWRLPRHRTP 167
>gi|163734788|ref|ZP_02142226.1| sodium/hydrogen exchanger family, putative [Roseobacter litoralis
Och 149]
gi|161391893|gb|EDQ16224.1| sodium/hydrogen exchanger family, putative [Roseobacter litoralis
Och 149]
Length = 837
Score = 37.3 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 11/185 (5%)
Query: 40 FPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL 99
FP ++ G L G+L A V + ++ + ++A + G + A+
Sbjct: 203 FPLLIIGGALIGWLAARCAVWVMAAFARYELAQISISVALPYLAYIVAEQSVGASGVIAV 262
Query: 100 AAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
A + N R+S + E+ + ++L A + IP
Sbjct: 263 VVAGLTLNLTGPGRLSPQSWANLREVWELLAHWAGALIFILAALL-----------IPRL 311
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
L VR L ++++ + L L + + P + ++IL G + +
Sbjct: 312 LEEVRLGDLFLLVVVILAAIAARVVILFGLLPLLTILRISPPVERQYRVAILWGGLRGAV 371
Query: 220 SWVVG 224
+ +
Sbjct: 372 TLALA 376
>gi|50292197|ref|XP_448531.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527843|emb|CAG61492.1| unnamed protein product [Candida glabrata]
Length = 1120
Score = 37.3 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 59/201 (29%), Gaps = 7/201 (3%)
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
D+ +P + L P+K + + + +
Sbjct: 289 ENFSDIFGVFFPATAGIFAGAGMSSELRKPSKSIPKGTLWGLLFTIICYSVVVMSMGCSI 348
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
R + + + +S L+ S L F + + AY+ +
Sbjct: 349 PRNTLYKELQVIQSVSVVQWLIFSGELATSLFSIIVGMVGAAYILVAIAKDSIFPGLKVF 408
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKS----KIMSILPGVIFTWISWVVGAVL---FTHYI 232
+ + L + LFL K + ++ + +++ F
Sbjct: 409 NKHPLSALLFTWFSTQLCLFLDVNKIANFITMTFLMTFAVMNLACFLLSISSAPNFRPSF 468
Query: 233 VTFSTYSTMYAGLASIMTCLV 253
F+ Y+ ++ ++S++ L+
Sbjct: 469 KYFNRYTALFGTISSVIAMLI 489
>gi|323574436|emb|CBL51483.1| hypothetical protein [Glomerella graminicola]
Length = 1497
Score = 37.3 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 79/267 (29%), Gaps = 25/267 (9%)
Query: 13 YDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPE 72
A + + A A+ +L+ +L++ ++ + E
Sbjct: 545 KRAYQRMWND-ISATATAAALNIILALV-----IGSVFYGTPDATAEKHASYAFYHPASE 598
Query: 73 VIAKPITDEILQVLAVPAKGLFTISALAA--------AYFSSNGVEALRISLNRAYRVVE 124
IA + D ++ + L YF + ++ +R +
Sbjct: 599 AIAGVVADIPIKFVTATCFNLTLYFLAGLRREPGQFFLYFLVIYIATFV--MSAVFRTMA 656
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYA 184
+ I++ ++ V++ ++ + V + + + L +
Sbjct: 657 AITKTISQAMTLAGVMVLALVIYTGFAVRIPQMVV---WFGWIRFLNPIFYAFEILIANE 713
Query: 185 TMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
F+ + + P + G + + A + T+Y +S +
Sbjct: 714 FHGREFVCSEIIPSYTPLVGDSWICSTVGAVAGQRTVSGDAFIETNYQYYYSHVWRNFG- 772
Query: 245 LASIMTCLVFLYMLGVFFILGAELNAS 271
L FL+ + + ELN+S
Sbjct: 773 -----ILLAFLFFFMIIYFAATELNSS 794
>gi|299753306|ref|XP_001833190.2| alpha-1,3-glucan synthase [Coprinopsis cinerea okayama7#130]
gi|298410240|gb|EAU88623.2| alpha-1,3-glucan synthase [Coprinopsis cinerea okayama7#130]
Length = 2343
Score = 37.3 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 28/233 (12%), Positives = 59/233 (25%), Gaps = 22/233 (9%)
Query: 34 SALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAK-- 91
A+ S F+ FG N G T + + + + +
Sbjct: 2020 YAVASAAGFLFFGLN----FGEEAGAATEVWTLRACIVQGSQQIWVAALWYWGYSLNGRE 2075
Query: 92 -GLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
G + A + + L L R + + + +
Sbjct: 2076 DGYIPPWYIILAVWPLAIMSFLFAYLMLYGLPDYYRQAPPKVPGFLKTMFRRKLVVWFLI 2135
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
V + + + L N+ + W I + +F + L L +
Sbjct: 2136 SVVLRDYWLSTPYGRNWTFLWNVPIPKWQTFILVIVFFVF-AWAAMMLVLTHFSKTHTWL 2194
Query: 211 LP------GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
LP G W + G Y+ ++ ++L++
Sbjct: 2195 LPIFAVGLGAP-RWCQMLWGTSSLGLYVPW-------GGSAGPYLSISLWLWL 2239
>gi|332299734|ref|YP_004441655.1| sodium/hydrogen exchanger [Porphyromonas asaccharolytica DSM 20707]
gi|332176797|gb|AEE12487.1| sodium/hydrogen exchanger [Porphyromonas asaccharolytica DSM 20707]
Length = 795
Score = 37.3 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 64/210 (30%), Gaps = 12/210 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS F I+F + L + +I I IL L +
Sbjct: 152 LLSQFGLILFMFTIGMELRMKDLKGQAQQAFIISQSGIIFPFILGIILTYSLYSRPELLS 211
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+ + G+ + R+++ RS + L A +V +
Sbjct: 212 EGSSFLSLALFVGISLSITAFPVLARIIQERSLSHSHLGRLALSTAAMGDIVAWLMLAAI 271
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ ++ G+ ++N A LA+ G++ L + + +L +
Sbjct: 272 MAVSQG---------GSFTSALYNMLFLALYLAVIFGILRPLFGLLGRRVRHREVLSKSL 322
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
I ++ A + Y + ++
Sbjct: 323 MGLIFILLMA---SAYFTEIMSMHALFGAF 349
>gi|301764687|ref|XP_002917769.1| PREDICTED: polycystic kidney disease protein 1-like 2-like
[Ailuropoda melanoleuca]
Length = 2448
Score = 37.3 bits (85), Expect = 2.5, Method: Composition-based stats.
Identities = 23/221 (10%), Positives = 64/221 (28%), Gaps = 13/221 (5%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
I ++F + ++ + + L ++ + A++ + ++ +
Sbjct: 2191 FMVAAEAIYLLFLLYYMIVQGKLMRKQRWSYFHSKWNLLELTIILASWSALAMF--VKRA 2248
Query: 116 LNRAYRVVEMRSWYITRL----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ + R+ + + L + ++ V + L K
Sbjct: 2249 ILAERDIQHYRNHGEEGISFGETAAADAALGYIIAFLVLLSTVKLWHLLRLNPKMNMITS 2308
Query: 172 NLLLIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
L + +L + + + K + L T IS +G +F +
Sbjct: 2309 ALSHAWGDISGFIIVILIMLLAYSIASNLIFGWKLRSYKTLFDAAETMISLQLG--IFNY 2366
Query: 231 YIVTFSTYSTMYAGL--ASIMTCLVFLYMLGVFFILGAELN 269
YS + S + + F+ + ++ N
Sbjct: 2367 --EEVLDYSPVLGSFLIGSCIIFMTFVVLNLFISVILVAFN 2405
>gi|289808757|ref|ZP_06539386.1| ribonuclease BN [Salmonella enterica subsp. enterica serovar Typhi
str. AG3]
Length = 36
Score = 37.3 bits (85), Expect = 2.6, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 254 FLYMLGVFFILGAELNASMIIYYWRKK 280
++Y +LGAE+ ++ Y K+
Sbjct: 1 WVYWTWCIVLLGAEITVTLGEYRKLKQ 27
>gi|116195892|ref|XP_001223758.1| hypothetical protein CHGG_04544 [Chaetomium globosum CBS 148.51]
gi|88180457|gb|EAQ87925.1| hypothetical protein CHGG_04544 [Chaetomium globosum CBS 148.51]
Length = 1235
Score = 37.3 bits (85), Expect = 2.7, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 76/231 (32%), Gaps = 14/231 (6%)
Query: 33 LSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG 92
+ + FP + L + I + G + L + G
Sbjct: 887 YRTVFAAFPLFIVALVLRKQFRVYDTTGMFIPFLEGLDLCLRQSIPLMLASLTLLTLSTG 946
Query: 93 LFTISALAAAYFSSNGVEALRISLNRA--YRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ ++ A+ + NG ++ + + ++ LI+ V + +V +
Sbjct: 947 IMAPASNASFWHWRNGTSSIMDFQHNDLLIGTEDPLFLFLIPLIAIVCVGVCTVFNYMAL 1006
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT------MLALFIGLIFVHLFLPAAK 204
+ + + + V +GN + + M+ + L+ V +P
Sbjct: 1007 TLTHLLGVLASLVTFHPGWIGNEDRKKTTPAAFFSPSPRRRMITTAVLLLLVTTMVPYQF 1066
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ +++ L ++ T + + + L + F Y+ SI ++++
Sbjct: 1067 AYLVACLVQLMTTVRAQRIASELRSTANSNFYNYTH------SIFILMLWI 1111
>gi|146303114|ref|YP_001190430.1| protein kinase [Metallosphaera sedula DSM 5348]
gi|145701364|gb|ABP94506.1| protein kinase [Metallosphaera sedula DSM 5348]
Length = 819
Score = 36.9 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/226 (14%), Positives = 71/226 (31%), Gaps = 13/226 (5%)
Query: 43 IVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA 102
I+F L F + +V + P + VP + L
Sbjct: 4 ILFVVYLLIFFVMDSHISVQNLLVGLSIPLSCIPLALPR-ANLYVVPVYSITLFLPLFLY 62
Query: 103 YFSSNGVEAL---RISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
+ + V A+ SL ++R + ++F + + ++ + V
Sbjct: 63 LSNLDLVVAILLVVSSLGVPLSAGDLRRLVVVPFMAFLVMFGITYSVAGIILVSSGAYSW 122
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
+ + ++ ++ + +AL F+ L + S L + I
Sbjct: 123 FPVLAGVPLFISPVMKLVQSKWNVVPGIALVFISQFLESGLNFLGLSLTSFLSISSISVI 182
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
W V A L + + ++ L+FL + + ++LG
Sbjct: 183 LWGVLAFLVSVSFLALGFKRSI---------PLIFLGLSALVYLLG 219
>gi|4586977|dbj|BAA76559.1| mok13+ [Schizosaccharomyces pombe]
Length = 2371
Score = 36.9 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 40/167 (23%), Gaps = 15/167 (8%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
AL F+ + L E + L V
Sbjct: 2116 FSWPLALVMLLFAILLIFGL------PDYYWESPGNIPAFYTALLRRKLVLWFFVATILQ 2169
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ K+ L + L+++I ++ FL +LP
Sbjct: 2170 NYWLSTLYGRSWKYLWGGSLLAPWKMLTIAFFLFLSMWIIMLM---FLGRKSLTHSWLLP 2226
Query: 213 --GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
GV W+ Y I+ ++++++
Sbjct: 2227 VFGVGLGSPRWLQMMWG----TSNIGVYLPWAGVAGPIVGRILWIWL 2269
>gi|19113292|ref|NP_596500.1| alpha-1,3-glucan synthase Mok13 [Schizosaccharomyces pombe 972h-]
gi|12643961|sp|Q9Y719|MOK13_SCHPO RecName: Full=Cell wall alpha-1,3-glucan synthase mok13
gi|4481951|emb|CAB38509.1| alpha-1,3-glucan synthase Mok13 [Schizosaccharomyces pombe]
Length = 2358
Score = 36.9 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 20/167 (11%), Positives = 40/167 (23%), Gaps = 15/167 (8%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
AL F+ + L E + L V
Sbjct: 2103 FSWPLALVMLLFAILLIFGL------PDYYWESPGNIPAFYTALLRRKLVLWFFVATILQ 2156
Query: 153 FVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ K+ L + L+++I ++ FL +LP
Sbjct: 2157 NYWLSTLYGRSWKYLWGGSLLAPWKMLTIAFFLFLSMWIIMLM---FLGRKSLTHSWLLP 2213
Query: 213 --GVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
GV W+ Y I+ ++++++
Sbjct: 2214 VFGVGLGSPRWLQMMWG----TSNIGVYLPWAGVAGPIVGRILWIWL 2256
>gi|125987730|sp|Q2H102|BST1_CHAGB RecName: Full=GPI inositol-deacylase
Length = 1147
Score = 36.9 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 28/231 (12%), Positives = 76/231 (32%), Gaps = 14/231 (6%)
Query: 33 LSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG 92
+ + FP + L + I + G + L + G
Sbjct: 799 YRTVFAAFPLFIVALVLRKQFRVYDTTGMFIPFLEGLDLCLRQSIPLMLASLTLLTLSTG 858
Query: 93 LFTISALAAAYFSSNGVEALRISLNRA--YRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ ++ A+ + NG ++ + + ++ LI+ V + +V +
Sbjct: 859 IMAPASNASFWHWRNGTSSIMDFQHNDLLIGTEDPLFLFLIPLIAIVCVGVCTVFNYMAL 918
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT------MLALFIGLIFVHLFLPAAK 204
+ + + + V +GN + + M+ + L+ V +P
Sbjct: 919 TLTHLLGVLASLVTFHPGWIGNEDRKKTTPAAFFSPSPRRRMITTAVLLLLVTTMVPYQF 978
Query: 205 SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFL 255
+ +++ L ++ T + + + L + F Y+ SI ++++
Sbjct: 979 AYLVACLVQLMTTVRAQRIASELRSTANSNFYNYTH------SIFILMLWI 1023
>gi|328868132|gb|EGG16512.1| hypothetical protein DFA_09050 [Dictyostelium fasciculatum]
Length = 1381
Score = 36.9 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 24/236 (10%), Positives = 64/236 (27%), Gaps = 16/236 (6%)
Query: 40 FP-FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISA 98
FP + A + F+ F + G + + ++ + +G +
Sbjct: 46 FPKALTIIAVIIEFIQLISFGFKKVFPWGGDLGYYLKRIVSPISHPADVLAYQGFTVLFW 105
Query: 99 LAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFV---- 154
+A A+ V ++ + T + + +I F+
Sbjct: 106 VAIAFMVLGFVNIWYVAYTFYQGKIANIWIIRTLRWFVSFTVAVLYIPLISLFLIGLNCA 165
Query: 155 ------AIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
L + + I + + + + + +
Sbjct: 166 YDSENGGYYLTRFSSQDVLCYGPENIPITIFSICFIILFTIVAVCSSLTYYEFDTSVRDR 225
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC-LVFLYMLGVFFI 263
P F ++ ++ +F + Y + LA + L++L + F+
Sbjct: 226 FAKPHARF-DLTILLAKTVFAFFFELLRDYPWL---LAIVFFLGLIWLSFGSIVFL 277
>gi|109948247|ref|YP_665475.1| ribonuclease N fragment [Helicobacter acinonychis str. Sheeba]
gi|109715468|emb|CAK00476.1| ribonuclease N fragment [Helicobacter acinonychis str. Sheeba]
Length = 162
Score = 36.9 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 43/153 (28%), Gaps = 1/153 (0%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
+ + AS +S +LS+ P ++F +L V ++F P++I
Sbjct: 10 ELFYYASSLSFYTILSLSPILLFVFSLFVSDYMQAHSGEVEALIFPNAPKLIGAIKDFLE 69
Query: 83 LQVLAVPA-KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
A L +S + A ++ + A R + +G+
Sbjct: 70 NFKKTNTALGTLEAVSIVVALVLFCENYRSIASKIFDAKPRDYARCRGKEIFLFWGFGTT 129
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLL 174
+ V L +
Sbjct: 130 LVFLFALPLVVVRKFFFMLISFSNVRGKPKGVF 162
>gi|255024849|ref|ZP_05296835.1| hypothetical protein LmonocyFSL_17631 [Listeria monocytogenes FSL
J1-208]
Length = 39
Score = 36.9 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 22/34 (64%)
Query: 247 SIMTCLVFLYMLGVFFILGAELNASMIIYYWRKK 280
I+ +++ Y+ G+ ++G ELNA++ I +K+
Sbjct: 1 VIIILMLWFYLTGIILMIGGELNATLAIRKKKKE 34
>gi|307544635|ref|YP_003897114.1| potassium efflux system protein KefA [Halomonas elongata DSM 2581]
gi|307216659|emb|CBV41929.1| K05802 potassium efflux system protein KefA [Halomonas elongata DSM
2581]
Length = 1173
Score = 36.9 bits (84), Expect = 3.0, Method: Composition-based stats.
Identities = 31/240 (12%), Positives = 66/240 (27%), Gaps = 50/240 (20%)
Query: 30 HISLSALLSVF-PFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAV 88
I +ALL++ P I+ G LA G + + +L V
Sbjct: 582 AILFNALLAMPMPLILAGIGLALLFGGQGVARDIGWSLAQIALAWAVVAWARRLLTADGV 641
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ + A A R + +L+A
Sbjct: 642 AVRQFYWPPAYVAVL---------------------KRWLFWLLASMIPVLLVAPP---- 676
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
+ N + + + + P K
Sbjct: 677 ---------------ARDAGINLNYRPLAMTVLLAGFLGMSLALTKLIMAHTPFFGVKFF 721
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ G+ + ++G ++ + Y Y L+ + ++ LY+LGV+ ++ A +
Sbjct: 722 RLVLGLAMAAVPLLLGGLVVSGY---------AYTALSLVSRFMITLYVLGVWILVEAAV 772
>gi|313886265|ref|ZP_07819993.1| transporter, CPA2 family [Porphyromonas asaccharolytica
PR426713P-I]
gi|312924281|gb|EFR35062.1| transporter, CPA2 family [Porphyromonas asaccharolytica
PR426713P-I]
Length = 801
Score = 36.9 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 64/210 (30%), Gaps = 12/210 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS F I+F + L + +I I +L L +
Sbjct: 158 LLSQFGLILFMFTIGMELRMKDLKGQAQQAFIISQSGIIFPFILGILLTYGLYSRPELLS 217
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+ + G+ + R+++ RS + L A +V +
Sbjct: 218 EGSSFLSLALFVGISLSITAFPVLARIIQERSLSHSHLGRLALSTAAMGDIVAWLMLAAI 277
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ ++ G+ ++N A LA+ G++ L + + +L +
Sbjct: 278 MAVSQG---------GSFTSALYNMLFLALYLAVIFGILRPLFGLLGRRVRHREVLSKSL 328
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
I ++ A + Y + ++
Sbjct: 329 MGLIFILLMA---SAYFTEIMSMHALFGAF 355
>gi|312862817|ref|ZP_07723057.1| putative potassium/sodium efflux P-type ATPase, fungal-type
[Streptococcus vestibularis F0396]
gi|311101677|gb|EFQ59880.1| putative potassium/sodium efflux P-type ATPase, fungal-type
[Streptococcus vestibularis F0396]
Length = 894
Score = 36.9 bits (84), Expect = 3.1, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 53/190 (27%), Gaps = 5/190 (2%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
FI+F A L G+ I++V P + + ++ +G +
Sbjct: 695 FIIFFATLFGWDVLQPVHLLWINLVTDTLPAIALG-VEPAEPGIMTHKPRGRQSNFFDGG 753
Query: 102 AYFSSNGVEALRISLNRA---YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ + + L A + + + + + + +I +
Sbjct: 754 VFGAIMYQGVFQTILVLAVYGWGLAFPEHHTQAEIHADALTMAFATLGLIQLLHAFNVKS 813
Query: 159 ALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
V K I + + G + + ++ ++++ G
Sbjct: 814 VYQSVFKVGLFRNKTFNWAIPVAFVLLMATIVVPGFNNLFHVSHLSLTQWLAVIVGSFLI 873
Query: 218 WISWVVGAVL 227
+S + +
Sbjct: 874 VVSVELVKAI 883
>gi|292628237|ref|XP_001920772.2| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 1 [Danio
rerio]
Length = 3006
Score = 36.9 bits (84), Expect = 3.2, Method: Composition-based stats.
Identities = 26/239 (10%), Positives = 76/239 (31%), Gaps = 23/239 (9%)
Query: 31 ISLSALL-SVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVP 89
++ + + S+ ++ LA + + + ++A E + + +
Sbjct: 2449 VTYTTVSASLVALLITFLLLA-------ILRKLRSNLHSIHKNLVASIFLSEFIFLTGIN 2501
Query: 90 AKGLFTISALAAAYFSSNGVEAL----RISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
+ + A + + A L+ + EMR+ + + +
Sbjct: 2502 QTDSPFVCTVVAILLHYSYMCAFAWMFVEGLHIYRMLTEMRNINQGHMRFYYAIGWGIPA 2561
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
++ V + Y F L +IW+ +++ L ++ V +
Sbjct: 2562 IITGLAVGLDPQ---GYGNPDFCWLSVYDTLIWSITGPISIVVLINIVLIVLAAKASCGR 2618
Query: 206 KIMSILPGVIFTW-ISW-----VVGAVLFTHYIVT--FSTYSTMYAGLASIMTCLVFLY 256
+ + G I +++ + L V ++ ++A L+ + +F +
Sbjct: 2619 RQRTEKSGAISALRVAFLLLLLISATWLLGLMAVNSDVLSFHYLFAILSCLQGICIFFF 2677
>gi|315042411|ref|XP_003170582.1| hypothetical protein MGYG_07826 [Arthroderma gypseum CBS 118893]
gi|311345616|gb|EFR04819.1| hypothetical protein MGYG_07826 [Arthroderma gypseum CBS 118893]
Length = 463
Score = 36.9 bits (84), Expect = 3.3, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 8/166 (4%)
Query: 94 FTISALAAAYFSSNGVEALRISL-----NRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
T + S+ + +L N + R+ + + +L + +
Sbjct: 200 LTTGFCGSFTSFSSFMLDAYHALSNTLPNPNTDTILPRNGGYSFMAVLAVLLYTVLLCLS 259
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
V + L+Y P L I + I + ++G IF+ ++ P I
Sbjct: 260 SIVVGAHLADGLSYFTPTLPF--KFLRNILDRLIVLLAVGCWMGAIFLAIWTPDRHRPIQ 317
Query: 209 -SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
G I + LF Y + + L + + ++
Sbjct: 318 EQHWRGSAEFAIIFAPIGCLFRFYASLYFNPLILSFPLGTFLVNMI 363
>gi|322516700|ref|ZP_08069609.1| P-type cation-transporting ATPase [Streptococcus vestibularis ATCC
49124]
gi|322124733|gb|EFX96171.1| P-type cation-transporting ATPase [Streptococcus vestibularis ATCC
49124]
Length = 894
Score = 36.9 bits (84), Expect = 3.4, Method: Composition-based stats.
Identities = 19/190 (10%), Positives = 53/190 (27%), Gaps = 5/190 (2%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
FI+F A L G+ I++V P + + ++ +G +
Sbjct: 695 FIIFFATLFGWDVLQPVHLLWINLVTDTLPAIALG-VEPAEPGIMTHKPRGRQSNFFDGG 753
Query: 102 AYFSSNGVEALRISLNRA---YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ + + L A + + + + + + +I +
Sbjct: 754 VFGAIMYQGVFQTILVLAVYGWGLAFPEHHTQAEIHADALTMAFATLGLIQLLHAFNVKS 813
Query: 159 ALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
V K I + + G + + ++ ++++ G
Sbjct: 814 VYQSVFKVGLFRNKTFNWAIPVAFVLLMATIVVPGFNNLFHVSHLSLTQWLAVIVGSFLI 873
Query: 218 WISWVVGAVL 227
+S + +
Sbjct: 874 VVSVELVKAI 883
>gi|302532823|ref|ZP_07285165.1| integral membrane protein [Streptomyces sp. C]
gi|302441718|gb|EFL13534.1| integral membrane protein [Streptomyces sp. C]
Length = 288
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 16/163 (9%), Positives = 47/163 (28%), Gaps = 19/163 (11%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
A A F A++ + + + R + R + + +L+ + L++
Sbjct: 95 TAFGLAALAVFGLTFGSAVQTGYEKVWDLPTARWHTMWRHVVWLALLVCYLGLLVGIPAP 154
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
++ + + L + + ++LPG
Sbjct: 155 SDNVAG------------------TVVGTFSDTVGTCLFFWSSGRLLLGGRVRWRALLPG 196
Query: 214 VIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVFL 255
+ T + + V ++ + Y +++ +L
Sbjct: 197 AVATSLGLLGLRVFSQLVFSPLIASNAVTYGPFGTLLVVQSWL 239
>gi|156400722|ref|XP_001638941.1| predicted protein [Nematostella vectensis]
gi|156226066|gb|EDO46878.1| predicted protein [Nematostella vectensis]
Length = 1639
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 16/162 (9%), Positives = 45/162 (27%), Gaps = 12/162 (7%)
Query: 90 AKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIM 149
+ LA Y ++ ++++ + + V + + + ++ T++I
Sbjct: 105 GGTMPLFMTLAWIYTAAMIIKSIVYEKEKRLKEVMKVMGLGRTVHWVAWFINSASTMLIT 164
Query: 150 SFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI------------FVH 197
V A ++ P + L L+++ + + F
Sbjct: 165 IIFLVITLKAGRILQHSDPFIIFLFLVVFMFATIMMCFLISVFFSRANVSAACGGIIFFV 224
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+LP + + + F + Y
Sbjct: 225 TYLPYTMVRWFEAFMNSSQIAAACLSSTTAFGVACNYLARYE 266
>gi|302535392|ref|ZP_07287734.1| integral membrane protein [Streptomyces sp. C]
gi|302444287|gb|EFL16103.1| integral membrane protein [Streptomyces sp. C]
Length = 260
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 24/234 (10%), Positives = 72/234 (30%), Gaps = 27/234 (11%)
Query: 23 DGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEI 82
D ++ + L++ P ++ + G + G A+ + +
Sbjct: 21 DLSQLSLGFAALGFLTLVPLLIVVSAADPASG----RGFAQWLGDGLGVSAAARGEIERL 76
Query: 83 LQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ + A F + A++ + + + R W R + + VL+
Sbjct: 77 FALPGQAWRTTTAFGLAVLAVFGLSFGAAIQSGYEKIWDLPPARWWARWRHVLWLAVLIG 136
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPA 202
+ L ++ ++ + R T+++ + + L
Sbjct: 137 ILFLSAITPLWRN----------------------SSARGVVTVVSGTLFFWWSQRILLG 174
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVFL 255
+ ++LPG + T + + + ++ + Y +++ +L
Sbjct: 175 GRIAWATLLPGAVATMLGLLGLRLFSRLVFSPLIASSAVSYGPFGTVLVIQSWL 228
>gi|225439703|ref|XP_002272360.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297735536|emb|CBI18030.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 36.6 bits (83), Expect = 4.1, Method: Composition-based stats.
Identities = 18/208 (8%), Positives = 52/208 (25%), Gaps = 1/208 (0%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
MA ++ +S+ + F+ + + + + + +
Sbjct: 216 MAPLMTFFGFMSLAYLALGLVWFLRFVKFWKDIIQLHYHISAVIALGMCEVAIWYFEYAN 275
Query: 87 AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
L A + + + + L + +R + L
Sbjct: 276 FNSTGSRPVGVTLWAVSFTAVKKTVSRLLLLVVSMGYGVVRPTLGGITSKVLLLGLIYFV 335
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
+ + + K L + + I +L I L + + AK
Sbjct: 336 ASEALGLVEHLRSINDFSDKTKLILVLPVTFLDACFILWIFSSLSITLEKLQMRRSMAKL 395
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ + + + + + Y
Sbjct: 396 ELYRKFTNSLAVSVVLSIAWIGYELYFN 423
>gi|206895599|ref|YP_002247361.1| putative ribonuclease [Coprothermobacter proteolyticus DSM 5265]
gi|206738216|gb|ACI17294.1| putative ribonuclease [Coprothermobacter proteolyticus DSM 5265]
Length = 221
Score = 36.6 bits (83), Expect = 4.2, Method: Composition-based stats.
Identities = 30/209 (14%), Positives = 55/209 (26%), Gaps = 25/209 (11%)
Query: 60 PTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRA 119
V V + I + + A+ S+N +L +
Sbjct: 18 EQVSFSVLKYLSPDYEALLKPVITSLTISAR--WSWFLLIPLAWGSTNVFASLEHAATV- 74
Query: 120 YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWN 179
S + L S +++ V + + P
Sbjct: 75 --------IAKRERRSTVTIRLLSFAFILILAFSVWGYTVVGLFLEHLP----------- 115
Query: 180 GRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
+ L + L L + W V + + YI ST S
Sbjct: 116 --SWIYNLLFYAVLFSGFNVFLDGHVNTKYALVVGAGQSVIWYVVSKIVNFYIKQVST-S 172
Query: 240 TMYAGLASIMTCLVFLYMLGVFFILGAEL 268
++ ++I L + Y+L +LG EL
Sbjct: 173 IVFKVASAIPVVLFWYYVLAYVILLGWEL 201
>gi|289769937|ref|ZP_06529315.1| integral membrane protein [Streptomyces lividans TK24]
gi|289700136|gb|EFD67565.1| integral membrane protein [Streptomyces lividans TK24]
Length = 277
Score = 36.6 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 21/177 (11%), Positives = 54/177 (30%), Gaps = 23/177 (12%)
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYV 139
+++ + A A F + A++ + + + R W R + + V
Sbjct: 91 EKLFTRPGQALRSTTVFGIAALAVFGLSFGAAVQTGYEKVWDLSPARWWARWRHLVWIGV 150
Query: 140 LLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLF 199
L + L + + L+ + L +
Sbjct: 151 LTGYLFLSATTTLRPKP----------------------LAGGVVASLSAVLFLWWSQHL 188
Query: 200 LPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV-TFSTYSTMYAGLASIMTCLVFL 255
L + + ++LPG + T I + V + ++ + Y + +++ +L
Sbjct: 189 LLGGRIRWRALLPGAVATVIGLLGLRVFSSVVFSPLIASNAVTYGLVGTVLVIQSWL 245
>gi|50422861|ref|XP_460008.1| DEHA2E16258p [Debaryomyces hansenii CBS767]
gi|49655676|emb|CAG88261.1| DEHA2E16258p [Debaryomyces hansenii]
Length = 636
Score = 36.6 bits (83), Expect = 4.3, Method: Composition-based stats.
Identities = 29/245 (11%), Positives = 76/245 (31%), Gaps = 14/245 (5%)
Query: 25 WAMASHISLSALLSVFPFIVFGAN---LAGFLGAHQ--FVPTVIDVVFGAWPEVIAKPIT 79
+ + +L +F I+ L F G + + I +
Sbjct: 368 SNRGALSTFMFILYIFLSIISSFVSSYLYRFFGGENWKLNTILTPTLVPGVLFTIFLLLN 427
Query: 80 DEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV---------EMRSWYI 130
++ + A + T+ A+ +F + ++ S+ + + + R
Sbjct: 428 FFLIYAESSGAIPIGTMFAMTTIWFVISIPLSVVGSILASKKSMLAIPVRTNQIPRQIPQ 487
Query: 131 TRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF 190
+ L+ + + V + + + L + T +
Sbjct: 488 QPWYLRNFPLMIISGIFPFGSIAVEMYFIYSSLWFNKIFYMFGFLFFCFILMMLTSALIS 547
Query: 191 IGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMT 250
+ +++ L K S+ G + ++ L + Y + + +Y G +++ +
Sbjct: 548 VLMVYYTLCSENYKWHWKSLFIGGGCSIYVFLHSLFLISGYKLEGVSSIVLYVGYSAVTS 607
Query: 251 CLVFL 255
LVFL
Sbjct: 608 LLVFL 612
>gi|298293032|ref|YP_003694971.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and
periplasmic/7TM domain sensor(s) [Starkeya novella DSM
506]
gi|296929543|gb|ADH90352.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and
periplasmic/7TM domain sensor(s) [Starkeya novella DSM
506]
Length = 1084
Score = 36.6 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 24/211 (11%), Positives = 59/211 (27%), Gaps = 13/211 (6%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKP--ITDEILQVLAVPAKGL 93
LL++F I+F + A + + G +K I+ Q + +
Sbjct: 217 LLALFLTILFVVKGSAMFPAAAALAWAVLGYIGLDFGFWSKVFGISPLAQQFWRAAGEAI 276
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
+ + + LN V L+ ++ ++ +
Sbjct: 277 LAATLVVFLFA----------YLNLNRWHVRYAHVTAGWLVFLAAIVGLALLDPSAAAGI 326
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
L + + F + L + L L + + + + + P
Sbjct: 327 ARPSLLVVSLMGFGVVMWLALHRYDRAVLIIPTLFLLVVWVITAGMAVSGRIGNDLVAP- 385
Query: 214 VIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+ + +V + FT F+ ++
Sbjct: 386 ALLGGLVLIVMLIGFTVMQHAFAGIGSVAGS 416
>gi|169828518|ref|YP_001698676.1| variant surface antigen E (VlpE prolipoprotein) [Lysinibacillus
sphaericus C3-41]
gi|168993006|gb|ACA40546.1| Variant surface antigen E precursor (VlpE prolipoprotein)
[Lysinibacillus sphaericus C3-41]
Length = 624
Score = 36.6 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 32/238 (13%), Positives = 73/238 (30%), Gaps = 14/238 (5%)
Query: 12 IYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWP 71
+ I F++ + ++ + L S+ + L ++ +F
Sbjct: 100 LLYFIGIFMKTEVMPETPTLAFALLFSI----IIMYAAYLGLETFARSAEILFPMFILIF 155
Query: 72 EVIAKPITDEILQVLAVPAKGLFTISALAAAY-------FSSNGVEALRISLNRAYRVVE 124
IT +I P + S + FS + + + + +
Sbjct: 156 IFFIVCITPQIKFENIQPIMEVSKTSLFYSIIRFMSVFSFSLVMLLMIYPASVNVQQSSK 215
Query: 125 MRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLL---IIWNGR 181
+ T L F V L ++ ++++ A +Y ++GN L II
Sbjct: 216 KGFYIGTILGGFVLVTLITLCILVLGAANTASRTFPSYALAQRISIGNFLQRIEIIMAFM 275
Query: 182 IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
++ + + A K+ P ++ I + + + IV Y+
Sbjct: 276 WIVSIFIRTFMYFYTTVVGIAQIMKLKDHRPLILPMGIIMIGLSQIVHPDIVHSDNYN 333
>gi|147828308|emb|CAN66485.1| hypothetical protein VITISV_015392 [Vitis vinifera]
Length = 520
Score = 36.6 bits (83), Expect = 4.4, Method: Composition-based stats.
Identities = 18/208 (8%), Positives = 52/208 (25%), Gaps = 1/208 (0%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
MA ++ +S+ + F+ + + + + + +
Sbjct: 216 MAPLMTFFGFMSLAYLALGLVWFLRFVKFWKDIIQLHYHISAVIALGMCEVALWYFEYAN 275
Query: 87 AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
L A + + + + L + +R + L
Sbjct: 276 FNSTGSRPVGVTLWAVSFTAVKKTVSRLLLLVVSMGYGVVRPTLGGITSKVLLLGLIYFV 335
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
+ + + K L + + I +L I L + + AK
Sbjct: 336 ASEALGLVEHLRSINDFSDKTKLILVLPVTFLDACFILWIFSSLSITLEKLQMRRSMAKL 395
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIV 233
++ + + + + + Y
Sbjct: 396 ELYRKFTNSLAVSVVLSIAWIGYELYFN 423
>gi|311112758|ref|YP_003983980.1| CAAX amino protease [Rothia dentocariosa ATCC 17931]
gi|310944252|gb|ADP40546.1| CAAX amino protease [Rothia dentocariosa ATCC 17931]
Length = 820
Score = 36.6 bits (83), Expect = 4.5, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 57/162 (35%), Gaps = 18/162 (11%)
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+R V W+ L + V L+I+SF +A + L + L +
Sbjct: 81 HRLSHVNPRARWFTPVLEGLLIAGIYFVLLLIVSFALLAFAVMLRVPYDYLTDLQRIYAN 140
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI----LPGVIFTW----ISWVVGAVLF 228
++ + L + I + +F+ + + W + G ++F
Sbjct: 141 VFKTPLVFIALLITIIPVIPAIFIARLITNFKPLGLIHSIAGRMRWSYLGVFLGFGFLIF 200
Query: 229 THYIVTFSTYSTMYAGLAS------IMTCLVFLYMLGVFFIL 264
Y V F+T L + + + + +LY++ + ++
Sbjct: 201 GLYYVGFATLD---GSLTTHNSVHPLNSGMFWLYIV-LILLI 238
>gi|256392572|ref|YP_003114136.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
gi|256358798|gb|ACU72295.1| ribonuclease BN [Catenulispora acidiphila DSM 44928]
Length = 288
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 31/263 (11%), Positives = 73/263 (27%), Gaps = 24/263 (9%)
Query: 6 CIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDV 65
+I + + + + + L+++ P +V A + + Q + +
Sbjct: 20 RFSRSVIGNVWRGGTQLELVRRSMAFATLGLVALAPLLVVVAAVNPA--SQQGLGQWVVD 77
Query: 66 VFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEM 125
G P + + + + A F V ++ + +
Sbjct: 78 GMGLPPNTATPVL--HLFASHHQATGQVGVLGLALLAAFGLAFVTDVQRGYQGIWEIPPE 135
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R + ++ + + S + + GRI
Sbjct: 136 SWRQAWRRAVWLAAMIGYLGFEMESGALLRHG-----------------PLASAGRIVIV 178
Query: 186 MLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVT--FSTYSTMYA 243
A + FL A + +LPG + T F+ + + + Y
Sbjct: 179 ATAGLFFFWWGQYFLLAGRVPWGWLLPGALATVAGLSGLR-AFSVLVFNPMMVSSARDYG 237
Query: 244 GLASIMTCLVFLYMLGVFFILGA 266
+ ++ L +L +G GA
Sbjct: 238 MVGVVLVVLSWLIGVGFVIFGGA 260
>gi|332023999|gb|EGI64217.1| Transient receptor potential cation channel protein painless
[Acromyrmex echinatior]
Length = 852
Score = 36.6 bits (83), Expect = 4.6, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 68/240 (28%), Gaps = 21/240 (8%)
Query: 29 SHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAV 88
++ + ++F L ++ + + + + + + +
Sbjct: 470 ANFAFY--------VIFYFLLNAYILSMTYDARIENGMQTETNNRSNITSGSTLRIIWNQ 521
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
L+ + + + + ++ R+W LI+F LL+ + I
Sbjct: 522 QNNFLWASTVVMLLLLILREIFQFVSCVRSY--LMSSRNWMEIVLITFTIALLSGAGVQI 579
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLL-----LIIWNGRIYATMLALFIGLIFVHLFLPAA 203
+ V + L + P L + + + R L L L
Sbjct: 580 GAVVILLSAWELVILISQHPRLSTGIEMFRTVSLNFIRFLFPYLFLIFAFALAFYTLFKN 639
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
PG+ ++ + I S + S + ++F++ + +
Sbjct: 640 GDDTNFPDPGLSLFKTIIMLTGEFDANDIPFISH------PIWSHIVFMLFVFFIAIVLF 693
>gi|293396117|ref|ZP_06640397.1| glucose dehydrogenase [Serratia odorifera DSM 4582]
gi|291421250|gb|EFE94499.1| glucose dehydrogenase [Serratia odorifera DSM 4582]
Length = 834
Score = 36.6 bits (83), Expect = 4.7, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 35/117 (29%), Gaps = 1/117 (0%)
Query: 136 FGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
L A V+ + + + + + L L+ R AT L L+ +
Sbjct: 51 LITALFAVVSGLYLLVGGIWLAKLGGSIYYIVAGLVMLITAWLLYRRRATALLLYAVFLL 110
Query: 196 VHLFLPAAKS-KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + L + + + VL Y + Y L++++
Sbjct: 111 ATVIWALWEVGTDFWALTPRLDVTFFFGLWLVLPFIYRKLVANGKLAYGALSAVLVF 167
>gi|297487580|ref|XP_002696327.1| PREDICTED: MARVEL domain containing 2 [Bos taurus]
gi|296475873|gb|DAA17988.1| MARVEL domain containing 2 [Bos taurus]
Length = 559
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 11/134 (8%), Positives = 42/134 (31%), Gaps = 14/134 (10%)
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
Y ++ +++ G + T + + + + ++ S +
Sbjct: 242 STYGGYYYSGPKTAFVLVVAGLAWVTTIIILVLGMSMYYRTILLDSNWWPLTEFG-INVS 300
Query: 220 SWVVGAVLFTHYIVTFSTYSTMYAGL-------------ASIMTCLVFLYMLGVFFILGA 266
+++ Y+ + Y L + ++FL+ + +++GA
Sbjct: 301 LFILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAGFCRVEGGQIAAMIFLFFTMIVYLIGA 360
Query: 267 ELNASMIIYYWRKK 280
+ + + ++
Sbjct: 361 LVCLKLWRHEAARR 374
>gi|149727088|ref|XP_001504100.1| PREDICTED: similar to MARVEL domain-containing protein 2
(Tricellulin) [Equus caballus]
Length = 559
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 11/122 (9%), Positives = 40/122 (32%), Gaps = 15/122 (12%)
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHY 231
+L++ T++ L +G+ + + + +++ Y
Sbjct: 255 PFVLVVAGLSWVTTLIILVLGMSMYYRTILLDS-NWWPLTEFG-INVALFILYMAAAIVY 312
Query: 232 IVTFSTYSTMYAGL-------------ASIMTCLVFLYMLGVFFILGAELNASMIIYYWR 278
+ + Y L + ++FL++ + +++GA + + +
Sbjct: 313 VNDTNRGGLCYYPLFNTPVNAGFCRVEGGQIAAMIFLFVTMMVYLIGALVCLKLWRHEAA 372
Query: 279 KK 280
++
Sbjct: 373 RR 374
>gi|117617660|ref|YP_857696.1| small conductance mechanosensitive Ion channel (MscS) family
protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117559067|gb|ABK36015.1| small Conductance Mechanosensitive Ion Channel (MscS) Family
Protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 1092
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 58/197 (29%), Gaps = 13/197 (6%)
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
++ Q +A T + + + + L L + + R +T+
Sbjct: 469 QLPQAIAENNPITLTFAGIGILVLAWCWFK-LARHLTHYSQHIAPRIGKVTQDKFSLTSR 527
Query: 141 LASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF----IGLIFV 196
L +L+ + + + + + + + G I+ +LAL + L
Sbjct: 528 LLMRSLLASLPLPAMVLMVRGLLDGAWQYPFAVAVARGLGEIWFLLLALLMARHLTLEKG 587
Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLA--SIMTCLVF 254
L L K F + V+ F + Y L + + ++
Sbjct: 588 ILILHFRWQKERVQKVWSQFRTLLLVIIPSFFVQGMANSYQEHAFYDSLGRLAFIVGALW 647
Query: 255 LYMLGVFFILGAELNAS 271
L + A LN
Sbjct: 648 L------LLFFARLNRE 658
>gi|328866052|gb|EGG14438.1| patatin family protein [Dictyostelium fasciculatum]
Length = 1168
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 68/205 (33%), Gaps = 12/205 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
L+S+FPF+ ++ Q + + + I +++ P +
Sbjct: 464 LISIFPFVWALLLFERYVPIIQARGSYYLTLR----IAWNLLVHIVIFPLISRPKVTIPA 519
Query: 96 ISALAAAYFS-----SNGVEALRISLNRAYRVVEMRSWYITRLISFGYV---LLASVTLV 147
I Y S +GV + + ++ + W + + S + L+
Sbjct: 520 IVFFLTIYHSDISQYFSGVRNIEMIISLVLHLYLNHPWLLRKEDSKVWYDRSFGWLFILL 579
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
I ++P+ + +F + + ++A +LA + + + ++
Sbjct: 580 ISMGFVESLPIIERHYLYYFGSNDQSFRVYPLISLFALILADSLAFTLLTNPKISPVKRL 639
Query: 208 MSILPGVIFTWISWVVGAVLFTHYI 232
+ + + I ++ + ++
Sbjct: 640 VFHIIVSVIGPILLILTYLELGVWL 664
>gi|331230255|ref|XP_003327792.1| cell wall alpha-1,3-glucan synthase ags1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309306782|gb|EFP83373.1| cell wall alpha-1,3-glucan synthase ags1 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 2414
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 23/220 (10%), Positives = 52/220 (23%), Gaps = 11/220 (5%)
Query: 41 PFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALA 100
P + ++ F A F + V + + P A
Sbjct: 2099 PLSLLASSFYSFASAAGFRESFEAFVHVEIAALWYWGFKLQ----GTNPTDTASVPPAWI 2154
Query: 101 AAYFSSNGVEALRISLNRAYRVVEM-RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
A+ + + I + R+ + + + M+ +
Sbjct: 2155 NAFTLTLAITCFGIGYVLYIGLPNYYRNLPGQVPNFVKTLFRRKLVIWYMAAEILRDYWL 2214
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP--GVIFT 217
+ + L + + + + V L A K LP V
Sbjct: 2215 SGPYGRNWSFLWTGSAMPVWATVILVFIFFVVVWAVVMKALSHASKKHTWFLPIFAVGLG 2274
Query: 218 WISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
W + +TY + ++L++
Sbjct: 2275 APRWCQMLWG----TSSLATYIPWAGAAGPYLGTSLWLWL 2310
>gi|296445908|ref|ZP_06887859.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and
periplasmic/7TM domain sensor(s) [Methylosinus
trichosporium OB3b]
gi|296256576|gb|EFH03652.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and
periplasmic/7TM domain sensor(s) [Methylosinus
trichosporium OB3b]
Length = 956
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 32/213 (15%), Positives = 59/213 (27%), Gaps = 9/213 (4%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LL++F IVF A A + + AK A P
Sbjct: 192 LLALFLTIVFVVKGAVIFPAAAALAWTVLAYVCIDFGFWAKI-------FGADPNADRIW 244
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+ ++ V L LN V L+ ++ +V ++
Sbjct: 245 RAGAETVLSATLVVF-LFAYLNLNRWHVRAWHVAALWLLILADLVGLAVFDAPVAAGVAR 303
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
I LA V F L + L + + F + P +
Sbjct: 304 ISLATVAVVGFVLVLYLATHGFDRAIMLIPTWFLLLLWVCAAGFTVGGWLTNDLVSP-AL 362
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGLASI 248
+ +V + FT F++ + ++ +
Sbjct: 363 VGGLVLIVMLIGFTVMQNAFASGGLGHGAISEV 395
>gi|281366261|ref|NP_001163449.1| CG42570 [Drosophila melanogaster]
gi|261824090|gb|ACX94166.1| MIP06971p [Drosophila melanogaster]
gi|272455205|gb|ACZ94720.1| CG42570 [Drosophila melanogaster]
Length = 610
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 30/222 (13%), Positives = 65/222 (29%), Gaps = 22/222 (9%)
Query: 4 YFCIVFDIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVI 63
++ + + F+E+ S L+ F + L F+ +
Sbjct: 26 VLWLILALAQWLVIAFIEDARTTFTSL--YYICLATFALAILIFALFIFI-------EKV 76
Query: 64 DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVV 123
+ G + + +I+ A+ A + A V L I + R
Sbjct: 77 RFIKGLNFIMSLIIVELQIISTFALVAISWWPDVLTFFAVALILMVLFLLIGVFLPARAD 136
Query: 124 EMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI------- 176
+ +++F ++++A L+ V + IP A V L ++
Sbjct: 137 LTLDIAVLFILAFLFLIVACFILLFELLVRITIPYAYLVVEISITFTILLFVMYHAQTIN 196
Query: 177 ------IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP 212
+ + L LF + + + I P
Sbjct: 197 GNRFAEMRLNDFFLGSLILFHDFLIIFWLTFYWQIHYRPITP 238
>gi|46126223|ref|XP_387665.1| hypothetical protein FG07489.1 [Gibberella zeae PH-1]
Length = 417
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 25/244 (10%), Positives = 78/244 (31%), Gaps = 13/244 (5%)
Query: 44 VFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL---AVPAKGLFTISALA 100
+ + +L ++ +++ G + + + + A G +
Sbjct: 42 LAFFFVLQYLYVKVWILRKLELETGWIFSIGVQVVALRVHTWEIPLAKFNTGNQLSFVIP 101
Query: 101 AAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLAL 160
Y + +L YR + W+ + +++ +++ +F P A
Sbjct: 102 ILYAVCTAFSKM--ALALFYRKLSPERWWRWSVYGVLFLVAGYNLAIMLVILFGCAPFAK 159
Query: 161 AYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWIS 220
++ ++ +L+ I LI + ++ +
Sbjct: 160 SWDHTMLEGTCVNRPAVYICTAGLGILSDLILLIMPLPMVLRSRIPRRQKA----GLVVL 215
Query: 221 WVVGAVLFTHYIVTFSTYSTMYAGL---ASIMTCLVFLYMLGVFFILGAELNASMIIYYW 277
+ +G+ ++ ++ L I +V++++ I+ A L ++ +++
Sbjct: 216 FAIGSATLVTSVIRLVLLVPIFGALDVSWIISGAIVWVFIEANLLIICASLT-TLRCFFY 274
Query: 278 RKKP 281
R P
Sbjct: 275 RVAP 278
>gi|320588470|gb|EFX00939.1| glycerol/H+ symporter [Grosmannia clavigera kw1407]
Length = 667
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 56/196 (28%), Gaps = 10/196 (5%)
Query: 93 LFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
L L + +GV+A L S++ SF L+ + + +
Sbjct: 467 LLLPWRLFRLWALLDGVDAPENMLRCVSNNYSTLSFWRAWHRSFNRWLVRYIWIPLGGSN 526
Query: 153 FVAIPLALAYVRKFFPALGNLLLI----IWNGRIYATMLALFIGLIFVHLFLPAAK---- 204
F + + + + + L + ++ F+ + P +
Sbjct: 527 FRSWRGVVRSLLTYVLVFTFVALWHDIQLRLLIWGWLVVLFFVPEVAATYLFPRRRWEAH 586
Query: 205 -SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
+ + + ++ A L + + +Y L L F+ +
Sbjct: 587 LTAYRMLCCAGAVINVLMMMSANLVGFAVGWDGLQNIIYGILHDWPGVLFFV-VACSVLF 645
Query: 264 LGAELNASMIIYYWRK 279
G ++ + R+
Sbjct: 646 FGVQVMFEIRQTELRR 661
>gi|296815968|ref|XP_002848321.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238841346|gb|EEQ31008.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 481
Score = 36.2 bits (82), Expect = 5.2, Method: Composition-based stats.
Identities = 24/166 (14%), Positives = 48/166 (28%), Gaps = 8/166 (4%)
Query: 94 FTISALAAAYFSSNGVEALRISL-----NRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
T + S+ + +L N + R + + +L + +
Sbjct: 211 LTTGFCGSFTSFSSFMLDAFRALSNTLPNPNTSTIAPRHGGYSFMAVVAVILYTLLLCLS 270
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
V + L+Y P L + + + +IG IF+ ++ P I
Sbjct: 271 SIIVGAHLADGLSYFTPSLPF--RFLRKVLDRLVVVLAFGCWIGAIFLAIWTPDRDKPIQ 328
Query: 209 -SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLV 253
G I + LF Y + L + + +V
Sbjct: 329 EQHWRGSAEFAIIFAPLGCLFRFYASLYLNPIIPSFPLGTFLVNMV 374
>gi|228469973|ref|ZP_04054889.1| sodium/hydrogen antiporter [Porphyromonas uenonis 60-3]
gi|228308354|gb|EEK17192.1| sodium/hydrogen antiporter [Porphyromonas uenonis 60-3]
Length = 802
Score = 36.2 bits (82), Expect = 5.3, Method: Composition-based stats.
Identities = 29/210 (13%), Positives = 64/210 (30%), Gaps = 12/210 (5%)
Query: 36 LLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFT 95
LLS F I+F + L + +I I +L L +
Sbjct: 159 LLSQFGLILFMFTIGMELRMKDLKGQAQQAFVISQSGIIFPFILGILLTYGLYSRPELLS 218
Query: 96 ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVA 155
+ + G+ + R+++ RS + L A +V +
Sbjct: 219 EGSSFLSLALFVGISLSITAFPVLARIIQERSLSHSHLGRLALSTAAMGDIVAWLMLAAI 278
Query: 156 IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVI 215
+ ++ G+ ++N A LA+ G++ L + + +L +
Sbjct: 279 MAVSQG---------GSFTSALYNMLFLALYLAVIFGILRPLFGLLGRRVRHREVLSKSL 329
Query: 216 FTWISWVVGAVLFTHYIVTFSTYSTMYAGL 245
I ++ A + Y + ++
Sbjct: 330 MGLIFILLMA---SAYFTEIMSMHALFGAF 356
>gi|300744168|ref|ZP_07073187.1| CAAX amino protease family protein [Rothia dentocariosa M567]
gi|300379893|gb|EFJ76457.1| CAAX amino protease family protein [Rothia dentocariosa M567]
Length = 823
Score = 36.2 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 57/162 (35%), Gaps = 18/162 (11%)
Query: 117 NRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLI 176
+R V W+ L + V L+I+SF +A + L + L +
Sbjct: 81 HRLSHVNPRARWFTPVLEGLLIAGIYFVLLLIVSFALLAFAVMLRVPYDYLTDLQRIYAN 140
Query: 177 IWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI----LPGVIFTW----ISWVVGAVLF 228
++ + L + I + +F+ + + W + G ++F
Sbjct: 141 VFKTPLVFIALLITIIPVIPAIFIARLITNFKPLGLIHSIAGRMRWSYLGVFLGFGFLIF 200
Query: 229 THYIVTFSTYSTMYAGLAS------IMTCLVFLYMLGVFFIL 264
Y V F+T L + + + + +LY++ + ++
Sbjct: 201 GLYYVGFATLD---GSLTTQNSVHPLNSGMFWLYIV-LILLI 238
>gi|296810164|ref|XP_002845420.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842808|gb|EEQ32470.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 773
Score = 36.2 bits (82), Expect = 5.5, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 65/203 (32%), Gaps = 8/203 (3%)
Query: 34 SALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
+L P I+ +L F+ + + + P + +V
Sbjct: 362 YTMLIAVPVILISFSLYPFISSFKGTWHGTSIQDKVMRWGSIVPAIMAAAWIYSVVKGRH 421
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
T A+ FS + A N A ++ + + L S+ ++L+ + +
Sbjct: 422 STGKAIGILEFSCRILAA-----NPALLILGFATIAVIALWSWLWILMFTRVFLGGHLAS 476
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSK---IMSI 210
A L + + ++ + +L+ +W+ + A + + + I
Sbjct: 477 GAKKLFIIDIGTWWLGIYFILVYLWSLGVIAGIQRTTTAAVVSQWYFHRNAVPSPTSRDI 536
Query: 211 LPGVIFTWISWVVGAVLFTHYIV 233
+ ++ + G + + +
Sbjct: 537 VQAAFTHALTTLFGTICLSTLLS 559
>gi|118397971|ref|XP_001031316.1| hypothetical protein TTHERM_00835530 [Tetrahymena thermophila]
gi|89285642|gb|EAR83653.1| hypothetical protein TTHERM_00835530 [Tetrahymena thermophila
SB210]
Length = 1597
Score = 36.2 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 25/233 (10%), Positives = 63/233 (27%), Gaps = 17/233 (7%)
Query: 33 LSALLSVFPFIVFGANLAGFLG--AHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L I+F L G + Q ++ + + P+ + LQ+
Sbjct: 59 YYHFL----IIIFFLQLIGSVSSSQDQVQDKILYYILKGCEYIRISPLLKDFLQISQEAQ 114
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
+ + + F L S +F + + I +
Sbjct: 115 GIIINLLLILLEVFFLITFYILGRSTTNLSDKKFKNGLIFMGYTTFFLEMQRWILFNIQA 174
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSI 210
+ + + L+ + ++ + I + + +I V L
Sbjct: 175 DITSILGIGLSVINSIIHSIAQFIPINGLRSQFTYLKLFDYSIILVAHVLSY-------- 226
Query: 211 LPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
G + + ++ + + I F +Y ++ I + Y+
Sbjct: 227 -FGSLISLFAFEIL--ALFYIIQYFFSYPLFTKSISHIYAVFLNFYLAATILF 276
>gi|302509606|ref|XP_003016763.1| hypothetical protein ARB_05056 [Arthroderma benhamiae CBS 112371]
gi|291180333|gb|EFE36118.1| hypothetical protein ARB_05056 [Arthroderma benhamiae CBS 112371]
Length = 1026
Score = 36.2 bits (82), Expect = 5.7, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 76/256 (29%), Gaps = 17/256 (6%)
Query: 4 YFCIVFDIIYDAIEHFVEEDG--WAMASHIS---LSALLSVFPFIVFGANLAGFLGAHQF 58
+ I+ ++ + G MA ++ + + +GF
Sbjct: 545 FLSILMALLPLVLRFLSRNQGVHTGMAIELTVQNYYFAFLFVQIFLVVSISSGFSTIIDS 604
Query: 59 VPTVI---DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA---- 111
+ V+ D++ P+ + +LQ ++V A L I AL + + + ++
Sbjct: 605 LKNVLSVPDLLAQNIPKASNYFFSYMVLQAMSVSAGALVQIFALISWFILAPLLDNTARK 664
Query: 112 -LRISLNRAYRVVEMRSWYITRLISFGYVLL----ASVTLVIMSFVFVAIPLALAYVRKF 166
+ N T L S G + + +++F + +
Sbjct: 665 KWARATNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLTFSLFWVVYRYNTLYVT 724
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
L+ + + + +F K G I ++ +
Sbjct: 725 KFRFDTGGLLFPRAINQLFTGLYVMEICLIGMFFLVRDEKKEVACEGQAICMIIVLILTI 784
Query: 227 LFTHYIVTFSTYSTMY 242
LF +++ ++Y
Sbjct: 785 LFQYFLNEAFNPLSLY 800
>gi|210075148|ref|XP_500225.2| YALI0A18986p [Yarrowia lipolytica]
gi|199424900|emb|CAG84158.2| YALI0A18986p [Yarrowia lipolytica]
Length = 557
Score = 36.2 bits (82), Expect = 5.9, Method: Composition-based stats.
Identities = 25/202 (12%), Positives = 60/202 (29%), Gaps = 6/202 (2%)
Query: 33 LSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKG 92
+LS+ + F + + Q V V + + G + ++ + + +
Sbjct: 177 FYGILSICYLVAFLLWMFSYWQHRQDVLPVQNYITGIFGFLVVEVMFVWSYYDIVNETGD 236
Query: 93 LFTISALAAAYFSSNGVEA-----LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
A N + L + + Y VV+ + + TL+
Sbjct: 237 SPGSKAFLVIVSILNSMRNAFTFFLLLIVCLGYGVVKPTLGNLMWKCQALGGIHFVFTLI 296
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALF-IGLIFVHLFLPAAKSK 206
+++ P+ + V F ++ L + I +++ A +
Sbjct: 297 FTIALYLMDPVDASNVILFLIIPLSITLTTFYIWILSSLTATTKYLVERKQHVKAQMYRN 356
Query: 207 IMSILPGVIFTWISWVVGAVLF 228
+ IL G + + L
Sbjct: 357 LWWILLGSVIVICGFFFFNALI 378
>gi|320160305|ref|YP_004173529.1| putative two-component sensor histidine kinase [Anaerolinea
thermophila UNI-1]
gi|319994158|dbj|BAJ62929.1| putative two-component sensor histidine kinase [Anaerolinea
thermophila UNI-1]
Length = 791
Score = 36.2 bits (82), Expect = 6.1, Method: Composition-based stats.
Identities = 28/226 (12%), Positives = 59/226 (26%), Gaps = 20/226 (8%)
Query: 34 SALLSVFPFIV-----FGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAV 88
+ S+ ++ +L + + PE + + L ++
Sbjct: 3 TLFQSLLGLLIAPPGNLIYHLVLAFVVFATLQVALIAHRSHSPEGSGRLLLGLNLLLVGQ 62
Query: 89 PAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ + A S+ + L + V W G +L + ++
Sbjct: 63 LGLFIASGLAWQGVISSTLLLPVLDRVVLFWSVVWLGWLWLYPTPSRVGDILAGVLN-LV 121
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM 208
F+F+ P G+ I ++A+ GL F
Sbjct: 122 AIFLFLLFYTTWQQEGSGVPFNGSWQDWSITLVILILLVAITNGLFF-----------QR 170
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMY---AGLASIMTC 251
G + + L Y+ Y + Y LA +
Sbjct: 171 KDNWGAGVAMFALMGLGALAHLYLPPTGEYFSGYLRLGFLAGLPLL 216
>gi|326472897|gb|EGD96906.1| chromosome condensation protein [Trichophyton tonsurans CBS 112818]
Length = 461
Score = 36.2 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 55/189 (29%), Gaps = 8/189 (4%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL-----NRAYRVVEM 125
P A+ + +P T + S+ + +L N +
Sbjct: 175 PGEDAEALMKHKAVKKTIPLYIGLTTGFCGSFTSFSSFMLDAYRALSNTLPNPNTESISP 234
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + + +L + + V + L+Y P + + + +
Sbjct: 235 RNGGYSFMAVVAVMLYTILLCLSSIVVGAHLADGLSYFTP--PLRFKFVRNVLDRLVVVL 292
Query: 186 MLALFIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+IG IF+ ++ P I G I + LF Y +
Sbjct: 293 AFGCWIGTIFLAIWTPDRYRPIQEQHWRGSAEFAIIFAPIGCLFRFYASLYFNPLISSFP 352
Query: 245 LASIMTCLV 253
L + + ++
Sbjct: 353 LGTFLVNMI 361
>gi|34849380|gb|AAP58879.1| DNA segregation ATPase [Spiroplasma kunkelii CR2-3x]
Length = 1000
Score = 36.2 bits (82), Expect = 6.2, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 58/194 (29%), Gaps = 14/194 (7%)
Query: 81 EILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVL 140
+ A + RI+L + + ++ Y +
Sbjct: 15 ILKVKKKQRRNDSIGWVIGALLVTFFTILAIGRITLIGQFIDDVLFTFAFGWFKYLMYFV 74
Query: 141 LASVTLVIMSFVFVA-----IPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIF 195
+ L I V + I + + ++ F + ++LLI + L
Sbjct: 75 CLVLGLTIFIGVRIWLKSRLIWMVVTFIILFCWLVSSILLIYQYANEQMAYFDKTVFLDV 134
Query: 196 VHLFLPAAK--------SKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLAS 247
V +L + G+ WI+ G + + + ++Y+T++ L
Sbjct: 135 VKNYLQRWQDASIFNPNPNHPITFVGLNGAWITLYAGGGMIGNLLAGIASYTTIFGSL-I 193
Query: 248 IMTCLVFLYMLGVF 261
+ + L+ V
Sbjct: 194 LCLSVFLLWWSWVA 207
>gi|326480195|gb|EGE04205.1| chromosome condensation protein [Trichophyton equinum CBS 127.97]
Length = 461
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 55/189 (29%), Gaps = 8/189 (4%)
Query: 71 PEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL-----NRAYRVVEM 125
P A+ + +P T + S+ + +L N +
Sbjct: 175 PGEDAEALMKHKAVKKTIPLYIGLTTGFCGSFTSFSSFMLDAYRALSNTLPNPNTESISP 234
Query: 126 RSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYAT 185
R+ + + +L + + V + L+Y P + + + +
Sbjct: 235 RNGGYSFMAVVAVMLYTILLCLSSIVVGAHLADGLSYFTP--PLRFKFVRNVLDRLVVVL 292
Query: 186 MLALFIGLIFVHLFLPAAKSKIM-SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAG 244
+IG IF+ ++ P I G I + LF Y +
Sbjct: 293 AFGCWIGTIFLAIWTPDRYRPIQEQHWRGSAEFAIIFAPIGCLFRFYASLYFNPLISSFP 352
Query: 245 LASIMTCLV 253
L + + ++
Sbjct: 353 LGTFLVNMI 361
>gi|298530847|ref|ZP_07018249.1| cytochrome c class I [Desulfonatronospira thiodismutans ASO3-1]
gi|298510221|gb|EFI34125.1| cytochrome c class I [Desulfonatronospira thiodismutans ASO3-1]
Length = 886
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 17/215 (7%), Positives = 63/215 (29%), Gaps = 10/215 (4%)
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
++ + + +++ A + + + A I++ Y
Sbjct: 63 FFMLLTLVFGAVTGVGIWFAISLVSPGATSMLIHTFVYFWAIEWVFFMAEIIAIFVYYYT 122
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
L+ + Y + A ++L +++ + + ++ W
Sbjct: 123 FGSMERRKHLLMGWLYFIFAWLSLFVINGIIAFMLSPGQWLETGNVWHAFFNPTFWPALF 182
Query: 183 YATMLALFIGLIFVHLFLPAAK--------SKIMSILPGVIFTWISWVVGAVLFTHYIVT 234
+ T +AL + ++ + + + + F + ++ + +
Sbjct: 183 FRTFIALMLAGLYGFVTASWIRDADLREQMIRYCAKWLLAPF--VFMLISGYWYLQSVPE 240
Query: 235 FSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELN 269
+ + + F+++ V I G ++
Sbjct: 241 GAQAMILGRSPEIVPFFQAFIWLSVVIVIGGLIIS 275
>gi|300777885|ref|ZP_07087743.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300503395|gb|EFK34535.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 1161
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 33/234 (14%), Positives = 70/234 (29%), Gaps = 15/234 (6%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
I + L L T+ V + + + + +L A G +
Sbjct: 80 VINAMSALFSALTILFLFWTITHFVRRLLNKDFEEITKHQEISILFAGAVGALCFTFSDT 139
Query: 102 AYFSS---------NGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFV 152
+FS+ + AL + L + +I +VL SV + +M +
Sbjct: 140 FWFSAVEGEVYSMASMFIALLVWLITKWENEYKAGNSERWIILIFFVLGLSVGVHMMCML 199
Query: 153 FVAIPLALAYVRKFFPALGNLLL--IIWNGRIYATMLALFIGLIFVHLFLPAAKSKIM-- 208
+ + Y R + N + +I G + +F ++ + L +
Sbjct: 200 AIPAVCLVYYARNYKFTWKNFIWANLITLGILIIVFKIIFPLIMTMFGRLEIFFVNGLGL 259
Query: 209 SILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFF 262
G I ++ VV Y +Y A + ++ + +
Sbjct: 260 PFHSGTIAAFVLMVVICYFLIKYARKAKR--NIYQTAALSVVFMMIGFSCWMVI 311
>gi|226363619|ref|YP_002781401.1| hypothetical protein ROP_42090 [Rhodococcus opacus B4]
gi|226242108|dbj|BAH52456.1| hypothetical membrane protein [Rhodococcus opacus B4]
Length = 301
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 24/260 (9%), Positives = 63/260 (24%), Gaps = 24/260 (9%)
Query: 10 DIIYDAIEHFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGA 69
+ I+ ++ + + ++ SV P ++ + L+ + + T
Sbjct: 26 RTVRRVIDGLIDIELVDRSMTLAARIFTSVLPVMIAASTLSSWNVTASTIKTQFGFDPTE 85
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ + +G R ++ + S
Sbjct: 86 LSSTSGTV---------DTTDPSFAAFGVVGLLMIAISGTSFARALARIYGKIWNIPSIN 136
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
I + VL A + L N+ I +
Sbjct: 137 IRDAWRWLVVLFAVAMSGTAIGLT--------------GELTNVRFIGPPLALAGEFAVW 182
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTM-YAGLASI 248
L + + T + + + + + + L +
Sbjct: 183 MAVWTLSPYLLTMGTLRGRVLWATGALTAAALTILHTGGRLVLPRITAAAQHQFGSLGLV 242
Query: 249 MTCLVFLYMLGVFFILGAEL 268
T + +L++L V + A +
Sbjct: 243 FTAISWLFVLSVVIVGSAVI 262
>gi|56418592|ref|YP_145910.1| stage II sporulation protein E [Geobacillus kaustophilus HTA426]
gi|56378434|dbj|BAD74342.1| stage II sporulation protein E (serine phosphatase) [Geobacillus
kaustophilus HTA426]
Length = 826
Score = 35.8 bits (81), Expect = 6.8, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 5/172 (2%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+A ++ LS+ + G ++ GFL + +V VI P V+
Sbjct: 87 ISLLAGALT----LSLDVALFVGVSIFGFLFIYGWVRRVISESLKIVPFVVFVLSLSAKW 142
Query: 84 QVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ A A + V L + V+ + ++L
Sbjct: 143 LISYYWLGERSVYGAAMAVVEAGLSLVLTLIFMQSIPLLTVQKHKHALRAEEIISLIILL 202
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L M V + ++ L + G + L + L
Sbjct: 203 ASMLTGMIGWAVYGLSLEHVMSRYLVLLFAFVAGAATGSTVGVVTGLVLSLA 254
>gi|261417557|ref|YP_003251239.1| stage II sporulation protein E [Geobacillus sp. Y412MC61]
gi|297528432|ref|YP_003669707.1| protein serine/threonine phosphatase [Geobacillus sp. C56-T3]
gi|319765214|ref|YP_004130715.1| stage II sporulation protein E, protein serine/threonine
phosphatase [Geobacillus sp. Y412MC52]
gi|261374014|gb|ACX76757.1| stage II sporulation protein E, protein serine/threonine
phosphatase [Geobacillus sp. Y412MC61]
gi|297251684|gb|ADI25130.1| protein serine/threonine phosphatase [Geobacillus sp. C56-T3]
gi|317110080|gb|ADU92572.1| stage II sporulation protein E, protein serine/threonine
phosphatase [Geobacillus sp. Y412MC52]
Length = 826
Score = 35.8 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 49/172 (28%), Gaps = 5/172 (2%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
+A ++ LS+ + G ++ GFL + +V VI P V+
Sbjct: 87 ISLLAGALT----LSLDVALFVGISIFGFLFIYGWVRRVISESLKIVPFVVFVLSLSAKW 142
Query: 84 QVLAVPAKGLFTISALAAAY-FSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLA 142
+ A A + V L + V+ + ++L
Sbjct: 143 LISYYWLGERSVYGAAMAVVEAGLSLVLTLIFMQSIPLLTVQKHKHALRAEEIISLIILL 202
Query: 143 SVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI 194
+ L M V + ++ L + G + L + L
Sbjct: 203 ASMLTGMIGWAVYGLSLEHVMSRYLVLLFAFVAGAATGSTVGVVTGLVLSLA 254
>gi|157376271|ref|YP_001474871.1| integral membrane sensor hybrid histidine kinase [Shewanella
sediminis HAW-EB3]
gi|157318645|gb|ABV37743.1| integral membrane sensor hybrid histidine kinase [Shewanella
sediminis HAW-EB3]
Length = 1161
Score = 35.8 bits (81), Expect = 6.9, Method: Composition-based stats.
Identities = 26/215 (12%), Positives = 63/215 (29%), Gaps = 6/215 (2%)
Query: 52 FLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA 111
++ F T + K + L S L A +S+ V
Sbjct: 281 YILVFAFFATPLGQAGNLLYGDSLKSDAYVLFLPAFNGQAWLGLFSFLGAISAASSMV-- 338
Query: 112 LRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ ++ + + + S + + A+ L + ++ L
Sbjct: 339 IISTIALSTMLSNEVVFPTLFKFSNIQSTNFHRFRSHLLSIRKALVLLVIFLSYGMFLLA 398
Query: 172 NLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVL--FT 229
+ G A+ + + ++ + G+ + W+V +L
Sbjct: 399 PPDTLASLGE--VAFGAIAQIGPTLFAAFLWRRVTLVGAILGISSGFSLWLVLNMLPQLG 456
Query: 230 HYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
Y + +A+++ LV + ML + +L
Sbjct: 457 FYPHPLAGSEYSMTTMATLIGLLVNILMLWLVSLL 491
>gi|322372861|ref|ZP_08047397.1| calcium-transporting ATPase, P-type (transporting), HAD
superfamily, subfamily IC [Streptococcus sp. C150]
gi|321277903|gb|EFX54972.1| calcium-transporting ATPase, P-type (transporting), HAD
superfamily, subfamily IC [Streptococcus sp. C150]
Length = 894
Score = 35.8 bits (81), Expect = 7.2, Method: Composition-based stats.
Identities = 20/189 (10%), Positives = 53/189 (28%), Gaps = 5/189 (2%)
Query: 42 FIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAA 101
FI+F A L G+ I++V P + + ++ +G +
Sbjct: 695 FIIFFATLFGWDVLQPVHLLWINLVTDTLPAIALG-VEPAEPGIMTHKPRGRQSNFFDGG 753
Query: 102 AYFSSNGVEALRISLNRA---YRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPL 158
+ + L+ L A + +V + + + + +I +
Sbjct: 754 VFGAIIYQGILQTILVLAVYGWGLVFPEHHTQGAIHADALTMAFATLGLIQLLHAFNVKS 813
Query: 159 ALAYVRKFFPA-LGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFT 217
V K I + + G + + ++ ++++ G
Sbjct: 814 VYQSVFKVGLFRNKTFNWAIPVAFVLLMATIVVPGFNNLFHVSHLSLTQWLAVIVGSFLI 873
Query: 218 WISWVVGAV 226
+ +
Sbjct: 874 VVLVELVKA 882
>gi|294777590|ref|ZP_06743041.1| acyltransferase [Bacteroides vulgatus PC510]
gi|294448658|gb|EFG17207.1| acyltransferase [Bacteroides vulgatus PC510]
Length = 1284
Score = 35.8 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 19/172 (11%)
Query: 35 ALLSVFPFI---VFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L+S P + + L G LG + ++ + + I D +
Sbjct: 684 TLMSFLPMLVSWIIIVGLMGMLGIEFNIINIILSTFIFGIGDDFSIFIMDGLQNKYRTGR 743
Query: 91 KGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L + + +A+ + G+ L + L S + + + V+
Sbjct: 744 QLLNSHKTAIFFSAFTTVIGMGTLVFA-------------RHPALQSISLISILGMIAVV 790
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L ++ + R L FIG +F+ L +
Sbjct: 791 LVAYTLQPILFRFFITAPASKGLPPYTLTGLARTGGLFLLFFIGCLFLRLLI 842
>gi|254881171|ref|ZP_05253881.1| exporter [Bacteroides sp. 4_3_47FAA]
gi|254833964|gb|EET14273.1| exporter [Bacteroides sp. 4_3_47FAA]
Length = 1284
Score = 35.8 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 19/172 (11%)
Query: 35 ALLSVFPFI---VFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L+S P + + L G LG + ++ + + I D +
Sbjct: 684 TLMSFLPMLVSWIIIVGLMGMLGIEFNIINIILSTFIFGIGDDFSIFIMDGLQNKYRTGR 743
Query: 91 KGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L + + +A+ + G+ L + L S + + + V+
Sbjct: 744 QLLNSHKTAIFFSAFTTVIGMGTLVFA-------------RHPALQSISLISILGMIAVV 790
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L ++ + R L FIG +F+ L +
Sbjct: 791 LVAYTLQPILFRFFITAPASKGLPPYTLTGLARTGGLFLLFFIGCLFLRLLI 842
>gi|150003601|ref|YP_001298345.1| putative exporter [Bacteroides vulgatus ATCC 8482]
gi|149932025|gb|ABR38723.1| putative exporter [Bacteroides vulgatus ATCC 8482]
Length = 1284
Score = 35.8 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 19/172 (11%)
Query: 35 ALLSVFPFI---VFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L+S P + + L G LG + ++ + + I D +
Sbjct: 684 TLMSFLPMLVSWIIIVGLMGMLGIEFNIINIILSTFIFGIGDDFSIFIMDGLQNKYRTGR 743
Query: 91 KGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L + + +A+ + G+ L + L S + + + V+
Sbjct: 744 QLLNSHKTAIFFSAFTTVIGMGTLVFA-------------RHPALQSISLISILGMIAVV 790
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L ++ + R L FIG +F+ L +
Sbjct: 791 LVAYTLQPILFRFFITAPASKGLPPYTLTGLARTGGLFLLFFIGCLFLRLLI 842
>gi|157825278|ref|YP_001492998.1| hypothetical protein A1C_00800 [Rickettsia akari str. Hartford]
gi|157799236|gb|ABV74490.1| hypothetical protein A1C_00800 [Rickettsia akari str. Hartford]
Length = 976
Score = 35.8 bits (81), Expect = 7.5, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 58/180 (32%), Gaps = 8/180 (4%)
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I VV G + + + + + + + + + S+N + + L+ V
Sbjct: 645 IGVVSGLMNGNTFEFFNNYLFDAITNFSDAIIANMSGYSLFTSTNTISNPFMFLDA---V 701
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + T + +L ++ +I + + A+ + + I
Sbjct: 702 MSKVFFSQTFIAQLLSLLSLGLSGIIYFIITFIAVGIVIITALRAVAVYIMAFMATCILI 761
Query: 183 YATMLALFIGLIFVHLFLPAAKSKI---MSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
L + L +L + I P V+ I +V LFT Y+ YS
Sbjct: 762 GIAPLFISFLLFDFTRYLFDNWVRFTIRYMIEPVVMMAGI--IVLTQLFTIYLDFVLGYS 819
>gi|157964173|ref|YP_001498997.1| VirB6 [Rickettsia massiliae MTU5]
gi|157843949|gb|ABV84450.1| VirB6 [Rickettsia massiliae MTU5]
Length = 966
Score = 35.8 bits (81), Expect = 7.7, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 58/180 (32%), Gaps = 8/180 (4%)
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I VV G + + + + + + + + + S+N + + L+ V
Sbjct: 635 IGVVSGLMNGNTFEFFNNYLFDAITNFSDSIIANMSGYSLFTSTNTISNPFMFLDA---V 691
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + T + +L ++ +I + + A+ + + I
Sbjct: 692 MSKIFFSQTFIAQLLALLALGLSGIIYFIITFIAVGIVIITALRAVAVYIMAFMATCILI 751
Query: 183 YATMLALFIGLIFVHLFLPAAKSKI---MSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
L + L +L + I P V+ I +V LFT Y+ YS
Sbjct: 752 GIAPLFISFLLFDFTRYLFDNWVRFTIRYMIEPVVMMAGI--IVLTQLFTIYLDFVLGYS 809
>gi|328868961|gb|EGG17339.1| hypothetical protein DFA_08334 [Dictyostelium fasciculatum]
Length = 1095
Score = 35.8 bits (81), Expect = 7.7, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 58/221 (26%), Gaps = 12/221 (5%)
Query: 40 FPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISAL 99
FP + L + +H + + + I K + + K F +
Sbjct: 597 FP--IILLALPNYFYSHAIRIGRVFSNRESSLKQIFKTSVEYFYNLFFANKKWQFPLQLS 654
Query: 100 AAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLA 159
+ G + + + + V L + + +
Sbjct: 655 IGFTSAVIGFWYFEG--------RRYNEFVVHGVWACATVGLVMSPSLGATITRGIHRVI 706
Query: 160 LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWI 219
+ +++ +L L + ++ + T+I
Sbjct: 707 GTLCGALLGFVVGIIVDKVPTAPKIVILMLVTFVWVFNVAFIQQDVRFSYAGAVAGLTYI 766
Query: 220 SWVVGAV-LFTHYIVTFSTYSTMYAGLASIMT-CLVFLYML 258
G+ F++YI ++ + + ++ +F Y
Sbjct: 767 IVAYGSYQSFSYYIGVLRSFHIVLGVVWVVIISFFIFPYFT 807
>gi|121712383|ref|XP_001273803.1| alpha-1,3-glucan synthase, putative [Aspergillus clavatus NRRL 1]
gi|119401955|gb|EAW12377.1| alpha-1,3-glucan synthase, putative [Aspergillus clavatus NRRL 1]
Length = 2433
Score = 35.8 bits (81), Expect = 7.8, Method: Composition-based stats.
Identities = 21/210 (10%), Positives = 44/210 (20%), Gaps = 19/210 (9%)
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
G Q + + ++ + + + +
Sbjct: 2140 GTQQAYVIALWYWGSTLTKASSQGLLSPEDNIANTWKMTAICAPIAILLWAIGLLMF--- 2196
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
R + V + L V + A + + L
Sbjct: 2197 -----FGLPNYYRQSPGKVPSFYRSVFRRKIVLWNFVVVIIQNWFLSAPYGRNWGFLWGS 2251
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILP------GVIFTWISWVVGAVL 227
+ ++ L + ILP G W +
Sbjct: 2252 AHTHNWQIVILCIVFFGFVWAAFLFILSHLSKQHSWILPVFACGLGAPRWAQIWWGVS-G 2310
Query: 228 FTHYIVTFSTYSTMYAGLASIMTCLVFLYM 257
+Y+ ST LAS +L++
Sbjct: 2311 IGYYLPWVGGGSTA-GALASRSV---WLWL 2336
>gi|317056932|ref|YP_004105399.1| hypothetical protein Rumal_2280 [Ruminococcus albus 7]
gi|315449201|gb|ADU22765.1| hypothetical protein Rumal_2280 [Ruminococcus albus 7]
Length = 526
Score = 35.8 bits (81), Expect = 8.1, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 214 VIFTWISWVVGAVLFTH--YIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILGAELNAS 271
+ W +F YI F +YST + L +++ L + + VF ++G + +
Sbjct: 20 AMIFSGLWNGIKQIFNIKNYIKVFKSYSTDFGALGWVLSILAIILVAAVFVLIGVIIIIA 79
Query: 272 MIIY 275
+ Y
Sbjct: 80 VRKY 83
>gi|325675140|ref|ZP_08154826.1| arabinosyl transferase [Rhodococcus equi ATCC 33707]
gi|325554101|gb|EGD23777.1| arabinosyl transferase [Rhodococcus equi ATCC 33707]
Length = 1106
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 57/181 (31%), Gaps = 18/181 (9%)
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
L LAAA + AL L R++ R + + A ++++
Sbjct: 419 AALVGAFTLAAAPTGLMCIAALLAGLRPITRLIVRRRHQVGTFSQLLPLAAAGTLVLVVV 478
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATML-------------ALFIGLIFVH 197
F + R NL R Y + + +F
Sbjct: 479 FADQTFSTVMEATRVRTIIGPNLEWFQDYQRYYFLFVQTTDGSLARRFAFLTMLLCLFTV 538
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLF-----THYIVTFSTYSTMYAGLASIMTCL 252
LF+ + +I + G + + V G + F T + F Y+ + LA++ +
Sbjct: 539 LFVFLRRKRIPGVAAGPSWRLMGIVFGTMFFMMFNPTKWTHHFGAYAGIAGSLAALTAVV 598
Query: 253 V 253
V
Sbjct: 599 V 599
>gi|225620426|ref|YP_002721683.1| hypothetical protein BHWA1_01509 [Brachyspira hyodysenteriae WA1]
gi|225215245|gb|ACN83979.1| hypothetical protein BHWA1_01509 [Brachyspira hyodysenteriae WA1]
Length = 1241
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 20/226 (8%), Positives = 58/226 (25%), Gaps = 14/226 (6%)
Query: 37 LSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAW---------PEVIAKPITDEILQVLA 87
+ P + L + +++ + + + I + +
Sbjct: 282 FAFAPLLFIAVVLF-LVHKDRYINHIETSFISIFVFLVLLFIGGFGYYRFIMNYEAYLYF 340
Query: 88 VPAKGLFTISALAAA--YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
P + N + + +L + + +
Sbjct: 341 PPGVASNDSIFSIIFKPFADMNIMSDIFTALANGSYLRPDMIQNLKSPFYPTLYKGMFLV 400
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
+ V V + ++ K + I Y ML + + ++ ++P
Sbjct: 401 FWPLFLVLVWCLVYRYFLCKIDKFNNDNDFITGISISYYKMLLMLAVGVMIYAYMPIRAR 460
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTC 251
+ + G + W + LF+ ++ Y +A+
Sbjct: 461 ALPPLNWGQLNEPSGWENLSYLFS--MIHRKQYGASGNDIAAAFIL 504
>gi|326913934|ref|XP_003203286.1| PREDICTED: transmembrane 9 superfamily member 2-like [Meleagris
gallopavo]
Length = 820
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 10/190 (5%)
Query: 77 PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISL-----NRAYRVVEMRSWYIT 131
+ + + A T+ A+ A +F + + N V
Sbjct: 608 IMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVRTNQIPRQ 667
Query: 132 RLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL-- 189
Y ++ F I + L ++ + + + ++ ++
Sbjct: 668 IPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILVITCS 727
Query: 190 --FIGLIFVHLFLPAAKSKIMSILPGVIFTW-ISWVVGAVLFTHYIVTFSTYSTMYAGLA 246
I L + HL + S L F+ +T + + +Y G
Sbjct: 728 EATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAIHYFFSKLQITGTASTILYFGYT 787
Query: 247 SIMTCLVFLY 256
IM + FL+
Sbjct: 788 MIMVLIFFLF 797
>gi|171683199|ref|XP_001906542.1| hypothetical protein [Podospora anserina S mat+]
gi|170941559|emb|CAP67211.1| unnamed protein product [Podospora anserina S mat+]
Length = 355
Score = 35.4 bits (80), Expect = 8.3, Method: Composition-based stats.
Identities = 18/180 (10%), Positives = 50/180 (27%), Gaps = 8/180 (4%)
Query: 70 WPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWY 129
+ +A+ + Q + L S + + + + +
Sbjct: 135 FGGSVAEATLEIRNQFIRKVYTILTVQILATTLVSSLSFMSDGYRNWIQNNPT----VLW 190
Query: 130 ITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL 189
++ S G+++L + + + + +
Sbjct: 191 LSLFGSMGFMILTYWKRHSYPTNLLFLSGFTLLEAYTISVIVSFYDSSIVLNAVVLTGGI 250
Query: 190 FIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIM 249
FI L + M L G ++ + + + ++ ST +Y LA+++
Sbjct: 251 FIFLTAFACQSKYDFTSWMPYLFGALWGLVLFGFMS----FFLPHTSTTELIYGLLAALI 306
>gi|242787775|ref|XP_002481084.1| alpha-1,3-glucan synthase Ags2 [Talaromyces stipitatus ATCC 10500]
gi|218721231|gb|EED20650.1| alpha-1,3-glucan synthase Ags2 [Talaromyces stipitatus ATCC 10500]
Length = 2413
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 18/204 (8%), Positives = 62/204 (30%), Gaps = 9/204 (4%)
Query: 54 GAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALR 113
G Q + + + IT+ + + + A+ ++ + A
Sbjct: 2122 GTQQLYVVALWYWGSSLSKQTQAGITNVQPIINSWKITAITVPIAIML--WAIGILLAFG 2179
Query: 114 ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNL 173
+ ++ S+Y + + L+ F+ +++ A
Sbjct: 2180 LPDYYRQAPGKVASFYKSIFRRKIIMWFFVTVLIQNFFLSAPYGRNWSFLWSSNHASNWQ 2239
Query: 174 LLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIV 233
++++ + + F+ + +I G W + L Y+
Sbjct: 2240 IVLLVVFFFVIVWGIMLGIMFFLSKSHSWI-LPVFAIGLGAPRWAQVWWGTSNL-GQYVP 2297
Query: 234 TFSTYSTMYAGLASIMTCLVFLYM 257
++ + ++++ ++L++
Sbjct: 2298 WAGSFVS-----GALISRSLWLWL 2316
>gi|195052400|ref|XP_001993294.1| GH13730 [Drosophila grimshawi]
gi|193900353|gb|EDV99219.1| GH13730 [Drosophila grimshawi]
Length = 955
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 14/130 (10%), Positives = 31/130 (23%), Gaps = 7/130 (5%)
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLII-WNGRIYATMLALFIGLIFVHLFL 200
V + + I L + + L + L V
Sbjct: 528 GYVMTTGYFVLVLNIVLLGKELFQMAHGLHGYAKYWENWLQWLIVFGVLLCVTPEVLWTG 587
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVL------FTHYIVTFSTYSTMYAGLASIMTCLVF 254
+ + + W+ +L F Y+ F+ + + CL+
Sbjct: 588 NLLTVPMWQHHVAAVVILLVWLELMMLVGRFPIFGVYVQMFTKVAVNFGKFLLAYICLLI 647
Query: 255 LYMLGVFFIL 264
+ L +
Sbjct: 648 AFGLSFAVLF 657
>gi|312137709|ref|YP_004005045.1| indolylacetylinositol arabinosyltransferase [Rhodococcus equi 103S]
gi|311887048|emb|CBH46357.1| putative indolylacetylinositol arabinosyltransferase [Rhodococcus
equi 103S]
Length = 1102
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 56/181 (30%), Gaps = 18/181 (9%)
Query: 91 KGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMS 150
L LAAA + AL L R++ R + + A ++++
Sbjct: 415 AALVGAFTLAAAPTGLMCIAALLAGLRPITRLIVRRRHQVGTFSQLLPLAAAGTLVLVVV 474
Query: 151 FVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATM-------------LALFIGLIFVH 197
F + R NL R Y + +F
Sbjct: 475 FADQTFSTVMEATRVRTIIGPNLEWFQDYQRYYFLFVQTTDGSLARRFAFLTMLLCLFTV 534
Query: 198 LFLPAAKSKIMSILPGVIFTWISWVVGAVLF-----THYIVTFSTYSTMYAGLASIMTCL 252
LF+ + +I + G + + V G + F T + F Y+ + LA++ +
Sbjct: 535 LFVFLRRKRIPGVAAGPSWRLMGIVFGTMFFMMFNPTKWTHHFGAYAGIAGSLAALTAVV 594
Query: 253 V 253
V
Sbjct: 595 V 595
>gi|153808576|ref|ZP_01961244.1| hypothetical protein BACCAC_02872 [Bacteroides caccae ATCC 43185]
gi|149128898|gb|EDM20115.1| hypothetical protein BACCAC_02872 [Bacteroides caccae ATCC 43185]
Length = 828
Score = 35.4 bits (80), Expect = 8.5, Method: Composition-based stats.
Identities = 27/213 (12%), Positives = 50/213 (23%), Gaps = 19/213 (8%)
Query: 36 LLSVFPF-IVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLF 94
LLS++ I LA V P A+ L
Sbjct: 613 LLSIYAIGIFLAVLLARLFSKFLVKGDDTPFVME-LPPYRMPTAKSIFRHTWEKGAQYLK 671
Query: 95 TISALAAAYFSSNGVEALR---ISLNRAYRVVEMRSWYI--TRLISFGYVLLASVTLVIM 149
+ + + E + + L I
Sbjct: 672 KMGGIIMVASVVIWFLGYYPNHDAYETVAEQQENSYIGQLGRAIEPVIEPMGFDWKLGIG 731
Query: 150 SFVFVAI-PLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS--- 205
V L ++ + + + + RI T L F ++FV ++ P +
Sbjct: 732 LISGVGAKELVVSTLGVLYVDDPDADSVSLAERIPITPLVAFCYMLFVLIYFPCIAALAA 791
Query: 206 ------KIMSILPGVIFTWISWVVGAVLFTHYI 232
L +T + + + F Y
Sbjct: 792 IKQESGSWKWALFAACYTTVLAWLVS--FAVYQ 822
>gi|290960863|ref|YP_003492045.1| hypothetical protein SCAB_65021 [Streptomyces scabiei 87.22]
gi|260650389|emb|CBG73505.1| putative phage protein [Streptomyces scabiei 87.22]
Length = 1402
Score = 35.4 bits (80), Expect = 8.6, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 59/208 (28%), Gaps = 9/208 (4%)
Query: 24 GWAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEIL 83
G A+ L+A++++ PF++ L LG V F + K ++ L
Sbjct: 443 GGFAAAQAVLNAVMALNPFVLVAIALV-ALGVALVVAYKKSETFRNIVQAAFKAVSVAAL 501
Query: 84 QVLAVPAKGLFTISALAA--AYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
+ V K + A + + + V + W G+++
Sbjct: 502 WLWNVVLKPVVGFIVTAFKWWWTAVKIYATAVGVILYGLGAVAVWLWQKAISPVIGWIVG 561
Query: 142 ASVTLVIMSFVFVAIPLA-LAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
++ ++ A V L ++ + I + G+
Sbjct: 562 GFRLWWTGVKLYFSLVGAGFRAVGAGAVWLWDVAISPTLDLIVGGFRLWWTGVKLYFGL- 620
Query: 201 PAAKSKIMSILPGVIFTWISWVVGAVLF 228
K G TW+ F
Sbjct: 621 ----VKTGFRAVGAGATWLWKTALQPAF 644
>gi|265752882|ref|ZP_06088451.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|263236068|gb|EEZ21563.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 1284
Score = 35.4 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 19/172 (11%)
Query: 35 ALLSVFPFI---VFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L+S P + + L G LG + ++ + + I D +
Sbjct: 684 TLMSFLPMLVSWIIIVGLMGILGIEFNIINIILSTFIFGIGDDFSIFIMDGLQNKYRTGR 743
Query: 91 KGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L + + +A+ + G+ L + L S + + + V+
Sbjct: 744 QLLNSHKTAIFFSAFTTVIGMGTLVFA-------------RHPALQSISLISILGMIAVV 790
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L ++ + R L FIG +F+ L +
Sbjct: 791 LVAYTLQPILFRFFITAPASKGLPPYTLTGLARTGCLFLLFFIGCLFLRLLI 842
>gi|194744650|ref|XP_001954806.1| GF18456 [Drosophila ananassae]
gi|190627843|gb|EDV43367.1| GF18456 [Drosophila ananassae]
Length = 583
Score = 35.4 bits (80), Expect = 8.7, Method: Composition-based stats.
Identities = 34/238 (14%), Positives = 65/238 (27%), Gaps = 11/238 (4%)
Query: 34 SALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
+L++F FI ++ F + K I D Q L
Sbjct: 18 FMILALFGFINIIVSMHYFTQTVISFVPDHWCYHEKLVNLTYKEIADIYSQFENPSCTRL 77
Query: 94 FTISALAAAYF---SSNGVEALR---ISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
I+ A + S+N V ++ S ++ TL
Sbjct: 78 EDINGHNATVSKEKCERWIYNYDFGYRSMNTELNWVCDSAYKARIGQSLFFIGSVVGTLF 137
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLI-----FVHLFLPA 202
+ + F G+ I T+ GL ++ +
Sbjct: 138 YGLLSDKIGRVPALILSNFCGFAGDFSTIFTKSVGTFTLCRFISGLAADTNFYLMYIIVL 197
Query: 203 AKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGV 260
+ G+ + ++FT ++ + + +Y S+ LV LY V
Sbjct: 198 EYIRPSMRTLGLNMAVGLFYCLGLVFTPWLAVLAGHWQIYLACTSLPILLVVLYYFAV 255
>gi|169597055|ref|XP_001791951.1| hypothetical protein SNOG_01307 [Phaeosphaeria nodorum SN15]
gi|160707439|gb|EAT90956.2| hypothetical protein SNOG_01307 [Phaeosphaeria nodorum SN15]
Length = 993
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 73/251 (29%), Gaps = 29/251 (11%)
Query: 23 DGWAMASHISLSALLSVFPFI-VFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDE 81
+G A+ + + + P + + Q + I + +T
Sbjct: 698 EGSTEAAQAAADIVF-LAPGLSTIVLAIKTARQIFQRMKAYIQYRIALCLHLEVYLVTSM 756
Query: 82 ILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLL 141
I+ + A+ + ++ A ++ E R + ++
Sbjct: 757 IILNETIRAELIVFLALFADLATV---------AVAYDNAHSEPRPVEWQLPKIWLISVI 807
Query: 142 ASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLP 201
+ L + ++V +R +++ + L + + ++
Sbjct: 808 LGLLLALATWV----------IRGTLFLPNGGIIVNFGAIQPILFLEVALTENWLIFVTR 857
Query: 202 AAKSKIMSILPGVIFTWISWVVGAVLFTH-----YIVTFSTYSTMY---AGLASIMTCLV 253
K+ L G I + LF Y T ++ + + + L+
Sbjct: 858 GGKTFPSFQLVGAILGVDALATIFTLFGWMSGHPYQTNPPTINSKFRDDGWVDIVTVVLI 917
Query: 254 FLYMLGVFFIL 264
+ Y +GV I+
Sbjct: 918 WAYSIGVTIII 928
>gi|225448713|ref|XP_002280844.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297736477|emb|CBI25348.3| unnamed protein product [Vitis vinifera]
Length = 524
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 20/239 (8%), Positives = 62/239 (25%), Gaps = 3/239 (1%)
Query: 27 MASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVL 86
MA ++ S +S+ ++ F+ + + + + + +
Sbjct: 215 MAPLMTFSGFMSLAYLVLGLVWFLQFVQYWKDIIHLHYHITAVIGLGMCEMAFWYFEYAN 274
Query: 87 AVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVT 145
L A + + + + L + +R +
Sbjct: 275 FNSTGNRPMGITLWAVTFSAVKKTVSRLLLLVVSMGYGVVRPTLGGITPKVLLLGFMYFV 334
Query: 146 LVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKS 205
+ + + K L + ++ I +L L + + AK
Sbjct: 335 ATEALELVEHLGNINDFSGKAKVFLVLPVALLDACFILWIFSSLSKTLEKLQMRRSMAKM 394
Query: 206 KIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFIL 264
++ + + V + + Y S ++ I + + + ++
Sbjct: 395 ELYRKFTNALAVSVLLSVAWIGYELYFNASDPLSELWRRAWIIPAF--WTLLAYIILVV 451
>gi|118399398|ref|XP_001032024.1| hypothetical protein TTHERM_00703530 [Tetrahymena thermophila]
gi|89286361|gb|EAR84361.1| hypothetical protein TTHERM_00703530 [Tetrahymena thermophila SB210]
Length = 2479
Score = 35.4 bits (80), Expect = 9.0, Method: Composition-based stats.
Identities = 20/223 (8%), Positives = 58/223 (26%), Gaps = 18/223 (8%)
Query: 43 IVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAA 102
+V + F + I ++ + + +
Sbjct: 2090 LVIIFVFHPQIVTASFSLFQCQQLGDNANPQKFSQIEPQLKCFEGEHLNWVKYLGIPSLV 2149
Query: 103 YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAY 162
+ + ++L + +++ T I+ +I + +
Sbjct: 2150 LWVFIIPLIMALALWKYKDIIDRPDIVATYGFITKGYRAEFFFWEIVIMYRKSILVIGSI 2209
Query: 163 VRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWV 222
K P L L ++++ + K L G + +
Sbjct: 2210 FWKLDPFLTGLNILLYLFFWLII------------------QQKFQPFLTGQLNKVEEYS 2251
Query: 223 VGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFILG 265
+ +F Y + + ++ +M L+ + +G + G
Sbjct: 2252 LLTSVFFIYFSLYFIVDQHGSVISILMIILLMVTYIGYYAYFG 2294
>gi|315050224|ref|XP_003174486.1| phosphate metabolism protein 7 [Arthroderma gypseum CBS 118893]
gi|311339801|gb|EFQ99003.1| phosphate metabolism protein 7 [Arthroderma gypseum CBS 118893]
Length = 1135
Score = 35.4 bits (80), Expect = 9.3, Method: Composition-based stats.
Identities = 32/256 (12%), Positives = 76/256 (29%), Gaps = 17/256 (6%)
Query: 4 YFCIVFDIIYDAIEHFVEEDG--WAMASHIS---LSALLSVFPFIVFGANLAGFLGAHQF 58
+ I+ ++ + G MA ++ + + +GF
Sbjct: 654 FLSILMALLPLVLRFLSRNQGVHTGMAIELTVQNYYFAFLFVQVFLVVSISSGFSTIIDS 713
Query: 59 VPTVI---DVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEA---- 111
+ V+ D++ P+ + +LQ ++V A L I AL + + + ++
Sbjct: 714 LKNVLSVPDLLAQNIPKASNYFFSYMVLQAMSVSAGALVQIFALISWFLLAPMLDNTARK 773
Query: 112 -LRISLNRAYRVVEMRSWYITRLISFGYVLL----ASVTLVIMSFVFVAIPLALAYVRKF 166
+ N T L S G + + +++F I +
Sbjct: 774 KWARATNLNQMQWGTFFPVYTTLASIGLIYCIISPLIMVFNVLTFGLFWIVYRYNTLYVT 833
Query: 167 FPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAV 226
L+ + + + +F K G I ++ +
Sbjct: 834 KFRFDTGGLLFPRAINQLFTGLYVMEICLIGMFFLVRDEKQEVACEGQAICMIVVLILTI 893
Query: 227 LFTHYIVTFSTYSTMY 242
LF +++ ++Y
Sbjct: 894 LFQYFLNEAFNPLSLY 909
>gi|212692254|ref|ZP_03300382.1| hypothetical protein BACDOR_01750 [Bacteroides dorei DSM 17855]
gi|212665131|gb|EEB25703.1| hypothetical protein BACDOR_01750 [Bacteroides dorei DSM 17855]
Length = 1284
Score = 35.4 bits (80), Expect = 9.4, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 19/172 (11%)
Query: 35 ALLSVFPFI---VFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L+S P + + L G LG + ++ + + I D +
Sbjct: 684 TLMSFLPMLVSWIIIVGLMGILGIEFNIINIILSTFIFGIGDDFSIFIMDGLQNKYRTGR 743
Query: 91 KGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L + + +A+ + G+ L + L S + + + V+
Sbjct: 744 QLLNSHKTAIFFSAFTTVIGMGTLVFA-------------RHPALQSISLISILGMIAVV 790
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L ++ + R L FIG +F+ L +
Sbjct: 791 LVAYTLQPILFRFFITAPASKGLPPYTLTGLARTGCLFLLFFIGCLFLRLLI 842
>gi|302501955|ref|XP_003012969.1| hypothetical protein ARB_00852 [Arthroderma benhamiae CBS 112371]
gi|291176530|gb|EFE32329.1| hypothetical protein ARB_00852 [Arthroderma benhamiae CBS 112371]
Length = 781
Score = 35.4 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 26/260 (10%), Positives = 64/260 (24%), Gaps = 14/260 (5%)
Query: 30 HISLSALLSVFPFI--VFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLA 87
+ L++ P + + + A + + +
Sbjct: 442 ASAFCTALALIPTLGNNYSFIITPVFFAMAGATWFFIKEADTFQPPPPPLMGKRPTYI-- 499
Query: 88 VPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLV 147
A + + + S + R + + +
Sbjct: 500 -KAVFVSFYLFGESIWTGSKLLLTNRRFIWLIPGYSIAFYGHRYLENGLAPAVARRYLGH 558
Query: 148 IMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKI 207
+ L + L+ + +G+ ++ + P
Sbjct: 559 SAWANIIVGGSNLGELLGALFVFLFTNLVTTPIPWVRLDAVMLLGVWYLSFWTPPPDQVA 618
Query: 208 MSILPGVIF--TWISWVVGAVLFTHYI----VTFSTYSTMYAGLASIMTCLVFLYMLGVF 261
+ + G F W G V YI + + + L ++M CL Y++
Sbjct: 619 YAWIIGATFLPISFGWAAGDVSLAAYIQAALARHESKAQNVSPLGAVMACLYTTYIVTYA 678
Query: 262 F---ILGAELNASMIIYYWR 278
+LG +++ I R
Sbjct: 679 ITSPLLGQYIDSVYIRTGGR 698
>gi|261200265|ref|XP_002626533.1| chromosome condensation protein [Ajellomyces dermatitidis SLH14081]
gi|239593605|gb|EEQ76186.1| chromosome condensation protein [Ajellomyces dermatitidis SLH14081]
Length = 578
Score = 35.4 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 43/148 (29%), Gaps = 4/148 (2%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSF 151
T + S + + ++L SF VL + + +S
Sbjct: 305 LTTGFCGSFTSFSTFMLDVFLALANDLPTPGHPSSPLSRNGGYSFMAVLAIIIYTLSLSI 364
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL--FIGLIFVHLFLPAAKSKIMS 209
+ + LA + + + + LA+ ++G +F+ ++ P +
Sbjct: 365 AALILGSHLAIFMDEYTPVIPYVFSRRCLDPIISFLAIGCWLGAVFLAIWPPDRDLGVHE 424
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFST 237
G + + L Y+
Sbjct: 425 HWRGSAVFTVVFAPLGCLLRFYVSLLLN 452
>gi|237726066|ref|ZP_04556547.1| exporter [Bacteroides sp. D4]
gi|229435874|gb|EEO45951.1| exporter [Bacteroides dorei 5_1_36/D4]
Length = 1284
Score = 35.4 bits (80), Expect = 9.5, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 19/172 (11%)
Query: 35 ALLSVFPFI---VFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L+S P + + L G LG + ++ + + I D +
Sbjct: 684 TLMSFLPMLVSWIIIVGLMGILGIEFNIINIILSTFIFGIGDDFSIFIMDGLQNKYRTGR 743
Query: 91 KGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L + + +A+ + G+ L + L S + + + V+
Sbjct: 744 QLLNSHKTAIFFSAFTTVIGMGTLVFA-------------RHPALQSISLISILGMIAVV 790
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L ++ + R L FIG +F+ L +
Sbjct: 791 LVAYTLQPILFRFFITAPASKGLPPYTLTGLARTGCLFLLFFIGCLFLRLLI 842
>gi|168021107|ref|XP_001763083.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685566|gb|EDQ71960.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 523
Score = 35.4 bits (80), Expect = 9.6, Method: Composition-based stats.
Identities = 19/241 (7%), Positives = 61/241 (25%), Gaps = 4/241 (1%)
Query: 25 WAMASHISLSALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQ 84
MA ++ A +++ + ++ + + + + + +++
Sbjct: 210 GRMAPFMTFYAFMALAYGFLGVLWFFQYMRNWKDILQLQNCISAVIGLGMSEMALWYFEY 269
Query: 85 VLAVPAKGLFTISALAAA-YFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLAS 143
+ + A + + + L + +R +
Sbjct: 270 LNFNMTGHRPMGITMWAVTVGAVKKTVSRLLILVVSMGFGVVRPTLGGLTSKVLLLGGTY 329
Query: 144 VTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAA 203
V + K L + ++ I +L L + A
Sbjct: 330 FLAAESLDVVENVNTINDPPGKERLFLVLPVAMLDAFFILWIFTSLSRTLEKLQARRRFA 389
Query: 204 KSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLYMLGVFFI 263
K ++ + + V + + Y + + I + Y+L +
Sbjct: 390 KLELYRKFTNSLAMAVVVSVAWIGYELYFKATDPFGERWQSFWIIPAF--W-YVLAFIIL 446
Query: 264 L 264
+
Sbjct: 447 V 447
>gi|237711477|ref|ZP_04541958.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229454172|gb|EEO59893.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 1284
Score = 35.4 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 19/172 (11%)
Query: 35 ALLSVFPFI---VFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L+S P + + L G LG + ++ + + I D +
Sbjct: 684 TLMSFLPMLVSWIIIVGLMGILGIEFNIINIILSTFIFGIGDDFSIFIMDGLQNKYRTGR 743
Query: 91 KGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L + + +A+ + G+ L + L S + + + V+
Sbjct: 744 QLLNSHKTAIFFSAFTTVIGMGTLVFA-------------RHPALQSISLISILGMIAVV 790
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L ++ + R L FIG +F+ L +
Sbjct: 791 LVAYTLQPILFRFFITAPASKGLPPYTLTGLARTGCLFLLFFIGCLFLRLLI 842
>gi|152994636|ref|YP_001339471.1| integral membrane sensor hybrid histidine kinase [Marinomonas sp.
MWYL1]
gi|150835560|gb|ABR69536.1| integral membrane sensor hybrid histidine kinase [Marinomonas sp.
MWYL1]
Length = 1057
Score = 35.4 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 27/198 (13%), Positives = 59/198 (29%), Gaps = 3/198 (1%)
Query: 34 SALLSVFPFIVFGANLAGFLGAHQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGL 93
+L V V + + V+ +F + +L + A
Sbjct: 15 YFILGVVGLAVAISPGYSTIIWPASGFAVVASIFFPKQAPFGIFLGSLLLNIGATWVNHH 74
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVIMSFVF 153
+L A + +++ V ++ T L+ ++ LA V ++S
Sbjct: 75 VFAWSLPALIAFGSTLQSFVGGYLVRRFVGVPFQFHRTGLV-VRFIFLAGVLSTLISASV 133
Query: 154 VAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFLPAAKSKIMSILPG 213
+ L + L N L+ I ++ ++ + F F + L G
Sbjct: 134 GSASLFSFGIIGQAELLTNWLVWWGGDMIGVLVMVPWLAVCFPKYFGNKFDHPLR--LIG 191
Query: 214 VIFTWISWVVGAVLFTHY 231
T + + + Y
Sbjct: 192 GFLTVLVITIVLSWGSSY 209
>gi|67458483|ref|YP_246107.1| TrbL/VirB6 plasmid conjugative transfer protein [Rickettsia felis
URRWXCal2]
gi|75537047|sp|Q4UNB6|Y091_RICFE RecName: Full=Uncharacterized protein RF_0091; Flags: Precursor
gi|67004016|gb|AAY60942.1| TrbL/VirB6 plasmid Conjugative transfer protein [Rickettsia felis
URRWXCal2]
Length = 977
Score = 35.4 bits (80), Expect = 9.7, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 8/180 (4%)
Query: 63 IDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRV 122
I VV G + + + + + + + + Y S+N + + L+ V
Sbjct: 646 IGVVSGLMNGNTFEFFNNYLFDAITNFSDAIIANMSGYSLYTSTNTISNPFMFLDA---V 702
Query: 123 VEMRSWYITRLISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRI 182
+ + T + +L ++ +I + + A+ + + I
Sbjct: 703 MSKIFFSQTFIAQLLSLLSLGLSGIIYFIITFIAVGIVIITALRAVAVYIMAFMATCILI 762
Query: 183 YATMLALFIGLIFVHLFLPAAKSKI---MSILPGVIFTWISWVVGAVLFTHYIVTFSTYS 239
L + L +L + I P V+ I +V LFT Y+ YS
Sbjct: 763 GIAPLFISFLLFDFTRYLFDNWVRFTIRYMIEPVVMMAGI--IVLTQLFTIYLDFVLGYS 820
>gi|327352508|gb|EGE81365.1| chromosome condensation protein [Ajellomyces dermatitidis ATCC
18188]
Length = 578
Score = 35.4 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 18/148 (12%), Positives = 43/148 (29%), Gaps = 4/148 (2%)
Query: 94 FTISALAAAYFSSNGVEALRISLNRAYRV--VEMRSWYITRLISFGYVLLASVTLVIMSF 151
T + S + + ++L SF VL + + +S
Sbjct: 305 LTTGFCGSFTSFSTFMLDVFLALANDLPTPGHPSSPLSRNGGYSFMAVLAIIIYTLSLSI 364
Query: 152 VFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLAL--FIGLIFVHLFLPAAKSKIMS 209
+ + LA + + + + LA+ ++G +F+ ++ P +
Sbjct: 365 AALILGSHLAIFMDEYTPVIPYVFSRRCLDPIISFLAIGCWLGAVFLAIWPPDRDLGVHE 424
Query: 210 ILPGVIFTWISWVVGAVLFTHYIVTFST 237
G + + L Y+
Sbjct: 425 HWRGSAVFTVVFAPLGCLLRFYVSLLLN 452
>gi|73957284|ref|XP_546816.2| PREDICTED: similar to polycystin 1-like 2 isoform a [Canis
familiaris]
Length = 2448
Score = 35.4 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 24/221 (10%), Positives = 62/221 (28%), Gaps = 13/221 (5%)
Query: 56 HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRIS 115
I ++F + ++ + + L ++ + A++ + +
Sbjct: 2191 FVVAAEAIYLLFLLYYMIVQGKLMRKQKWCYFHSKWNLLELTIILASWSALAMFAK--RA 2248
Query: 116 LNRAYRVVEMRSWYITRL----ISFGYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALG 171
+ + RS + + L + ++ V + L K
Sbjct: 2249 ILAERDIQHYRSHGEEGISFSETAAADAALGYIIAFLVLLSTVKLWHLLRLNPKMNMITS 2308
Query: 172 NLLLIIWNGR-IYATMLALFIGLIFVHLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTH 230
L + +L + + + K + L T IS +G +F +
Sbjct: 2309 ALRRAWGDISGFIIVILIMLLAYSIASNLIFGWKLRSYKTLFDAAETMISLQLG--IFNY 2366
Query: 231 YIVTFSTYSTMYAGL--ASIMTCLVFLYMLGVFFILGAELN 269
YS + S + + F+ + ++ N
Sbjct: 2367 --KEVLDYSPVLGSFLIGSCIIFMTFVVLNLFISVILVAFN 2405
>gi|319640181|ref|ZP_07994907.1| exporter [Bacteroides sp. 3_1_40A]
gi|317388168|gb|EFV69021.1| exporter [Bacteroides sp. 3_1_40A]
Length = 1284
Score = 35.4 bits (80), Expect = 9.9, Method: Composition-based stats.
Identities = 24/172 (13%), Positives = 52/172 (30%), Gaps = 19/172 (11%)
Query: 35 ALLSVFPFI---VFGANLAGFLGA-HQFVPTVIDVVFGAWPEVIAKPITDEILQVLAVPA 90
L+S P + + L G LG + ++ + + I D +
Sbjct: 684 TLMSFLPMLVSWIIIVGLMGMLGIEFNIINIILSTFIFGIGDDFSIFIMDGLQNKYRTGR 743
Query: 91 KGLFT--ISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISFGYVLLASVTLVI 148
+ L + +A+ + G+ L + L S + + + V+
Sbjct: 744 QLLNPHKTAIFFSAFTTVIGMGTLVFA-------------RHPALQSISLISILGMIAVV 790
Query: 149 MSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFVHLFL 200
+ + L ++ + R L FIG +F+ L +
Sbjct: 791 LVAYTLQPILFRFFITAPASKGLPPYTLTGLARTGGLFLLFFIGCLFLRLLI 842
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.320 0.136 0.347
Lambda K H
0.267 0.0414 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,147,313,149
Number of Sequences: 14124377
Number of extensions: 109920795
Number of successful extensions: 1443920
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 3880
Number of HSP's successfully gapped in prelim test: 72006
Number of HSP's that attempted gapping in prelim test: 1374589
Number of HSP's gapped (non-prelim): 132488
length of query: 281
length of database: 4,842,793,630
effective HSP length: 137
effective length of query: 144
effective length of database: 2,907,753,981
effective search space: 418716573264
effective search space used: 418716573264
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (20.9 bits)
S2: 80 (35.4 bits)