RPSBLAST alignment for GI: 254780367 and conserved domain: TIGR00765

>gnl|CDD|129848 TIGR00765, yihY_not_rbn, YihY family protein (not ribonuclease BN). Members of this subfamily include the largely uncharacterized BrkB (Bordetella resist killing by serum B) from Bordetella pertussis. Some members have an additional C-terminal domain. Paralogs from E. coli (yhjD) and Mycobactrium tuberculosis (Rv3335c) are part of a smaller, related subfamily that form their own cluster. Length = 259

 Score = 72.0 bits (177), Expect = 2e-13
 Identities = 51/256 (19%), Positives = 107/256 (41%), Gaps = 9/256 (3%)

Query: 18  HFVEEDGWAMASHISLSALLSVFPFIVFGANLAGFLGAHQ-FVPTVIDVVFGAWPEVIAK 76
            F E++ +  A  ++   LLS+ P +    +L       Q     + + +F  +   +  
Sbjct: 9   RFDEDELFQYAGSLAFYTLLSLVPLLAVMFSLFAAFPVFQDVSGELEEFIFPNFAPSLGD 68

Query: 77  PITDEILQVLAVPAKGLFTISALAAAYFSSNGVEALRISLNRAYRVVEMRSWYITRLISF 136
            I D I Q +   +  L  +  ++    +   +  +  +LN+ +RV   RS   +  I +
Sbjct: 69  MIKDYIEQFVK-NSNKLTAVGIVSLIVTALLLINNIDSTLNKIWRVKPRRSAIFSFAIYW 127

Query: 137 GYVLLASVTLVIMSFVFVAIPLALAYVRKFFPALGNLLLIIWNGRIYATMLALFIGLIFV 196
             + L  +       V V++ ++   +     A    L +         +L  +I    +
Sbjct: 128 TILTLGPL------LVGVSLAISSVVI-FDVFAQSFFLSVNAALLSVVPLLFTWIFFWLL 180

Query: 197 HLFLPAAKSKIMSILPGVIFTWISWVVGAVLFTHYIVTFSTYSTMYAGLASIMTCLVFLY 256
           +  +P  K K      G  F  + + +   LFT Y+ TF+TY  +Y  LA +   ++++Y
Sbjct: 181 YTIVPNKKVKHRHAFVGAFFAAVLFELAKWLFTFYVSTFATYQLIYGALAVLPFLMLWVY 240

Query: 257 MLGVFFILGAELNASM 272
           +  +  +LGAE+ +S+
Sbjct: 241 LSWLVVLLGAEITSSL 256