HHsearch alignment for GI: 254780368 and conserved domain: COG2086
>COG2086 FixA Electron transfer flavoprotein, beta subunit [Energy production and conversion].
Probab=100.00 E-value=0 Score=502.39 Aligned_cols=249 Identities=43% Similarity=0.667 Sum_probs=237.9
Q ss_pred CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 96999860303887605980788816324877332601368999999998559985289999714101588888785077
Q gi|254780368|r 1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGA 80 (249)
Q Consensus 1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGa 80 (249)
T Consensus 1 m~ilV~~k~~v~~~~~i~v~~~~~~~~~~gv~~~in~~D~~AvEeAlrLke~~~~~eV~vlt~Gp~~a~~~lr~aLAmGa 80 (260)
T COG2086 1 MKILVLIKKVVDDESKIRVDPDTGTLDRSGVPLSINPFDLNAVEEALRLKEKGYGGEVTVLTMGPPQAEEALREALAMGA 80 (260)
T ss_pred CCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCC
T ss_conf 90899999878962327981688840147886225812079999999861468886699999464533999999985488
Q ss_pred CCCEEEECC--CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEE-CCCEEEEEE
Q ss_conf 762376336--54788999999999861268649999611358886128999999857961332443343-286599998
Q gi|254780368|r 81 DRGILIESN--ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKI-IDNHAIVTR 157 (249)
Q Consensus 81 D~ai~i~d~--~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~-~~~~~~v~r 157 (249)
T Consensus 81 Draili~d~~~~~~d~~~ta~~Laa~~~~~~~~LVl~G~qa~D~~t~qvg~~lAe~Lg~P~~t~v~~i~~~d~~~v~v~R 160 (260)
T COG2086 81 DRAILITDRAFAGADPLATAKALAAAVKKIGPDLVLTGKQAIDGDTGQVGPLLAELLGWPQVTYVSKIEIVDGGKVTVER 160 (260)
T ss_pred CEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEE
T ss_conf 75999703223675589999999999987499889981344357646658999998698505337889974798799999
Q ss_pred ECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHC---CCCCCCEEEEEEECCCCCCCCEEECC
Q ss_conf 358967999963988999843556545469888998852166120498907---66668457999517885247455379
Q gi|254780368|r 158 EVGHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFA---IDLTPRLKVLRFEENRAERKGLRLYS 234 (249)
Q Consensus 158 ~~e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg---~d~~~~~~v~~~~~p~~~~~g~~~e~ 234 (249)
T Consensus 161 ~le~g~e~~e~~LPaVvtv~~~~n~PR~psl~~im~A~kk~v~~~~~~d~g~~~~~~~s~~~v~~~~~~~~r~~~~~v~~ 240 (260)
T COG2086 161 ELEGGLETVEAPLPAVVTVDLRINEPRYPSLPGIMAAKKKPVKKWSLADLGLNVGLAGSPLKVVKVTPPPERKAGVKVKD 240 (260)
T ss_pred ECCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCCCCEECCHHHHCCCCCCCCCCCEEEECCCCCCCCCCEEECC
T ss_conf 73795399971598899953555787778979998754578403457670642134688504664268764567648557
Q ss_pred -----HHHHHHHHHHHHCCC
Q ss_conf -----999999999861769
Q gi|254780368|r 235 -----TTKLIEILKSKHDLL 249 (249)
Q Consensus 235 -----~~eLv~~L~~e~~vi 249 (249)
T Consensus 241 ~~~e~a~~lv~~L~~~~~i~ 260 (260)
T COG2086 241 GPEEIAAELVEKLKEEGVIL 260 (260)
T ss_pred CHHHHHHHHHHHHHHHHCCC
T ss_conf 58999999999998732669