HHsearch alignment for GI: 254780368 and conserved domain: PRK03359
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed.
Probab=100.00 E-value=0 Score=523.98 Aligned_cols=243 Identities=23% Similarity=0.350 Sum_probs=226.4
Q ss_pred CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHH--HHHHHHHHH
Q ss_conf 969998603038876059807888163248773326013689999999985599852899997141015--888887850
Q gi|254780368|r 1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVE--EVLKNSLAM 78 (249)
Q Consensus 1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~--~~Lr~alAm 78 (249)
T Consensus 1 MkI~VcvKqVPD~~-~~~i~~~~g~l~~~~~~~~iNp~De~AlE~AlrlkE~~gg~~VtvvsvG~~~~~~~~~lr~aLAm 79 (256)
T PRK03359 1 MKIITCYKCVPDEQ-DIAVNNADGSLDFSKADAKISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLSR 79 (256)
T ss_pred CEEEEEEEECCCCC-CEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHC
T ss_conf 97999988787864-14870799939846986346865689999999988851995799999377544559999999975
Q ss_pred CCCCCEEEECC--CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEE-EECCCEEEE
Q ss_conf 77762376336--547889999999998612686499996113588861289999998579613324433-432865999
Q gi|254780368|r 79 GADRGILIESN--ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNI-KIIDNHAIV 155 (249)
Q Consensus 79 GaD~ai~i~d~--~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i-~~~~~~~~v 155 (249)
T Consensus 80 GaD~ai~i~d~~~~~~D~~~tA~~La~~i~~~~~DLVl~G~~s~D~~~gqvg~~lAe~Lg~P~vt~v~~i~~~~~~~~~v 159 (256)
T PRK03359 80 GPDELIVVIDDQFEQALPQQTASALAAAAQKAGFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKIISLTADTLTV 159 (256)
T ss_pred CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHCCCHHEEEEEEEEECCCEEEE
T ss_conf 89728997576544437799999999999872999999925102599985228999982985220077899953998999
Q ss_pred EEECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHCCCCCCCEEEEEEECCCCCCCCE-EECC
Q ss_conf 983589679999639889998435565454698889988521661204989076666845799951788524745-5379
Q gi|254780368|r 156 TREVGHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAIDLTPRLKVLRFEENRAERKGL-RLYS 234 (249)
Q Consensus 156 ~r~~e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~~~~~p~~~~~g~-~~e~ 234 (249)
T Consensus 160 ~R~~e~g~e~v~~~lPavvtv~~~~n~PR~psl~~im~AkkKpi~~~s~~dlgl~~~~~~~~~~~~~p~~~~~~~~~~eG 239 (256)
T PRK03359 160 ERELEDEVETLSIPLPAVIAVSTDINSPQIPSMKAILGAAKKPVQVWSAADIGLNAVPAWSEQQVAAPKQRERQRIVIEG 239 (256)
T ss_pred EEECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEECHHHCCCCCCCCEEEEEEECCCCCCCCEEEECC
T ss_conf 99857908999976998999988988668899799998679986373899949778882689886089866686389559
Q ss_pred -----HHHHHHHHHH
Q ss_conf -----9999999998
Q gi|254780368|r 235 -----TTKLIEILKS 244 (249)
Q Consensus 235 -----~~eLv~~L~~ 244 (249)
T Consensus 240 ~~~e~v~~lv~~Lk~ 254 (256)
T PRK03359 240 DGEEQIAAFAENLRK 254 (256)
T ss_pred CHHHHHHHHHHHHHH
T ss_conf 989999999999985