HHsearch alignment for GI: 254780368 and conserved domain: PRK12342

>PRK12342 putative electron transfer flavoprotein YdiQ; Provisional.
Probab=100.00  E-value=0  Score=511.58  Aligned_cols=243  Identities=26%  Similarity=0.365  Sum_probs=222.6

Q ss_pred             CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH--HHHHHHHHHH
Q ss_conf             96999860303887605980788816324877332601368999999998559985289999714101--5888887850
Q gi|254780368|r    1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKV--EEVLKNSLAM   78 (249)
Q Consensus         1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~--~~~Lr~alAm   78 (249)
T Consensus         1 M~I~VciKqVPD~~-~~~~~~d~-~l~~~~~~~~iNp~D~~AlE~Al~lk~~--gg~v~vvs~G~~~~~~~~~~r~alAm   76 (254)
T PRK12342          1 MKIITCFKLVPEEQ-DIVVTPEY-TLNFDNAEAKISQFDLNAIEAASQLATD--GDEIAALTVGGSLLQNSKVRKDVLSR   76 (254)
T ss_pred             CEEEEEEEECCCCC-EEEECCCC-CEEECCCCCCCCCCCHHHHHHHHHHHHC--CCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf             97999999888855-05884899-7885378655686569999999998861--99699999568802559999999973


Q ss_pred             CCCCCEEEECC--CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEE
Q ss_conf             77762376336--5478899999999986126864999961135888612899999985796133244334328659999
Q gi|254780368|r   79 GADRGILIESN--ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVT  156 (249)
Q Consensus        79 GaD~ai~i~d~--~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~  156 (249)
T Consensus        77 GaD~a~li~d~~~~g~D~~~tA~~La~~i~~~~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~i~~~~~~~~v~  156 (254)
T PRK12342         77 GPHSLYLVQDAQLEHALPLDTAKALAAAIEKIGFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVSKIQRQGNKLVVE  156 (254)
T ss_pred             CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCEEEEE
T ss_conf             79889998457656668899999999999983969999936212489885789999870997166799999719989999


Q ss_pred             EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHCCCC-CCCEEEEEEECCCCCCCC-EEECC
Q ss_conf             8358967999963988999843556545469888998852166120498907666-684579995178852474-55379
Q gi|254780368|r  157 REVGHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAIDL-TPRLKVLRFEENRAERKG-LRLYS  234 (249)
Q Consensus       157 r~~e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~-~~~~~v~~~~~p~~~~~g-~~~e~  234 (249)
T Consensus       157 R~~e~g~e~ve~~lPavvtv~~~~n~PR~psl~~im~AkkK~i~~~~~~dlg~~~~~~~~~v~~~~~Pp~~~~~~~i~eg  236 (254)
T PRK12342        157 RTLEDDVEVIELSLPAVLCVTSDINVPRIPSMKAILGAGKKPVNQWQASDIGWSQSAPLAELVSILVPPQTERKHIILDN  236 (254)
T ss_pred             EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEECHHHCCCCCCCCCEEEEEEECCCCCCCCCEEECC
T ss_conf             99179679999779989999899885577997899986699850858999497767786389997479976677668249


Q ss_pred             -----HHHHHHHHHHHHC
Q ss_conf             -----9999999998617
Q gi|254780368|r  235 -----TTKLIEILKSKHD  247 (249)
Q Consensus       235 -----~~eLv~~L~~e~~  247 (249)
T Consensus       237 d~~e~v~~Lv~~Lkee~~  254 (254)
T PRK12342        237 DSPEAIAELAEHLKKALN  254 (254)
T ss_pred             CHHHHHHHHHHHHHHHHC
T ss_conf             989999999999988659