HHsearch alignment for GI: 254780368 and conserved domain: cd01714
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=100.00 E-value=0 Score=461.06 Aligned_cols=200 Identities=46% Similarity=0.690 Sum_probs=193.3
Q ss_pred EEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCC
Q ss_conf 69998603038876059807888163248773326013689999999985599852899997141015888887850777
Q gi|254780368|r 2 KILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGAD 81 (249)
Q Consensus 2 ~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGaD 81 (249)
T Consensus 1 nI~V~vK~VPD~~~-~~~~~~~g~v~~~~~~~vin~~D~~AlE~Alrlke~-~g~~VtvlsvGp~~a~~~Lr~alAmGaD 78 (202)
T cd01714 1 NILVCVKQVPDTEE-KRVDPDTGTIDREGVPLIINPYDEYAVEEALRLKEK-YGGEVTVVSMGPPQAEEALREALAMGAD 78 (202)
T ss_pred CEEEEEEECCCCCC-EEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHC-CCCEEEEEEECCHHHHHHHHHHHHHCCC
T ss_conf 98999887878775-278389992984698435695438999999998660-3988999993747889999999970898
Q ss_pred CCEEEECC--CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEEC
Q ss_conf 62376336--5478899999999986126864999961135888612899999985796133244334328659999835
Q gi|254780368|r 82 RGILIESN--ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVTREV 159 (249)
Q Consensus 82 ~ai~i~d~--~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~r~~ 159 (249)
T Consensus 79 ~ai~i~d~~~~~~D~~~tA~~La~~i~~~~~DLIl~G~~s~D~~~g~v~~~lA~~Lg~P~vt~v~~i~~~~~~~~v~r~~ 158 (202)
T cd01714 79 RAILVSDRAFAGADTLATAKALAAAIKKIGVDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKIEIEGGKVTVEREL 158 (202)
T ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCEEEEEEEC
T ss_conf 35998065556669899999999999875998899954545799777999999994897224888999939999999984
Q ss_pred CCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEC
Q ss_conf 89679999639889998435565454698889988521661204
Q gi|254780368|r 160 GHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKK 203 (249)
Q Consensus 160 e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~ 203 (249)
T Consensus 159 ~~g~e~~~~~lPavisv~~~~n~pR~psl~~im~A~kkpi~~~s 202 (202)
T cd01714 159 EGGVETVEVKLPAVITVDLGINEPRYPSLPGIMKAKKKPIEVVS 202 (202)
T ss_pred CCEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEC
T ss_conf 89699999639999999899886577997999976799976669