HHsearch alignment of GI: 254780368 and MMDB domain: 2pfs_A_
>2pfs_A (A:) USP, universal stress protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.25A {Nitrosomonas europaea atcc 19718}
Probab=91.82 E-value=0.94 Score=24.64 Aligned_cols=100 Identities=10% Similarity=0.084 Sum_probs=62.2
Q ss_pred ECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH----------------------HHHHHHHHHHCCC-----CCEEE
Q ss_conf 32601368999999998559985289999714101----------------------5888887850777-----62376
Q gi|254780368|r 34 SMNPFDEIALEESLQLREKGIATEVIVVSIGSCKV----------------------EEVLKNSLAMGAD-----RGILI 86 (249)
Q Consensus 34 ~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~----------------------~~~Lr~alAmGaD-----~ai~i 86 (249)
.-++....|++.|+++..+ .+.+++++.+=+... .+.+.....+... .-.++
T Consensus 14 d~s~~s~~al~~a~~~a~~-~~~~i~~lhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (150)
T 2pfs_A 14 DFSSEDSQVVQKVRNLASQ-IGARLSLIHVLDNIPXPDTPYGTAIPLDTETTYDAXLDVEKQKLSQIGNTLGIDPAHRWL 92 (150)
T ss_dssp CCCTTHHHHHHHHHHHHHH-HTCEEEEEEEEC----------CCCCSSSCCCHHHHHHHHHHHHHHHHHHHTCCGGGEEE
T ss_pred CCCHHHHHHHHHHHHHHHH-CCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
T ss_conf 3998999999999999987-299068888852255544443333200069999999999999999888754987507999
Q ss_pred ECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC---CCCCEEHHHHHHHHHCCCCE
Q ss_conf 3365478899999999986126864999961135---88861289999998579613
Q gi|254780368|r 87 ESNETLEPLSIAKILREIVKKENPIIVIAGKQTT---DNESNQTGQMLAALMRWPQA 140 (249)
Q Consensus 87 ~d~~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~---D~~~g~v~~~lA~~Lg~p~v 140 (249)
.. + + .+..|...+++.++|||++|.+.- +.--|.+.-.+......|-+
T Consensus 93 ~~--g-~---~~~~i~~~a~~~~~dliv~g~~~~~~~~~~~gs~~~~li~~~~~PVl 143 (150)
T 2pfs_A 93 VW--G-E---PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAKCDVL 143 (150)
T ss_dssp EE--S-C---HHHHHHHHHHHTTCSEEEEEEC----------CHHHHHHHHCSSEEE
T ss_pred EE--C-C---HHHHHHHHHHHCCCCEEEEECCCCCCCCCEECCHHHHHHHCCCCCEE
T ss_conf 81--7-8---89999999997398379996899996424627789999853799899