HHsearch results for GI: 254780368 and protein with PDBid: 1efp_B

>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=100.00  E-value=0  Score=525.50  Aligned_cols=248  Identities=50%  Similarity=0.819  Sum_probs=239.9

Q ss_pred             CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf             96999860303887605980788816324877332601368999999998559985289999714101588888785077
Q gi|254780368|r    1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGA   80 (249)
Q Consensus         1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGa   80 (249)
                      |||+||+|||||++++++++++++.+++++++++|||||+||||+||||||+++|++|+++||||++++++||+|||||+
T Consensus         1 MkI~V~vK~VpD~~~~~~i~~~~~~~~~~~~~~~inp~D~~AlE~Al~lke~~~g~~V~v~s~G~~~~~~~lr~alamGa   80 (252)
T 1efp_B            1 MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGA   80 (252)
T ss_dssp             CEEEEECCEEECTTSCCCBCTTSSCBCCTTCCEEECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHHTC
T ss_pred             CEEEEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCC
T ss_conf             97999999677888636883899878224683246854699999999975427980999999663787999998862379


Q ss_pred             CCCEEEECC----CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEE
Q ss_conf             762376336----5478899999999986126864999961135888612899999985796133244334328659999
Q gi|254780368|r   81 DRGILIESN----ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVT  156 (249)
Q Consensus        81 D~ai~i~d~----~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~  156 (249)
                      |+++++.++    +++|+++||++||.++++.+|||||||+||+|+++||||+++|++|||||+|+|.+++++++.++++
T Consensus        81 d~a~~i~~~~~~~~~~d~~~ta~~la~~~~~~~~DLIl~G~~s~D~~~g~vg~~lAe~Lg~P~vt~v~~ie~~~~~~~v~  160 (252)
T 1efp_B           81 DRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVT  160 (252)
T ss_dssp             SEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEE
T ss_pred             CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCEEEEE
T ss_conf             82699992453466778999999999998741999999983256678884216889762898135789999829979999


Q ss_pred             EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHCCCCCCCEEEEEEECCCCCCCCEEECCHH
Q ss_conf             83589679999639889998435565454698889988521661204989076666845799951788524745537999
Q gi|254780368|r  157 REVGHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAIDLTPRLKVLRFEENRAERKGLRLYSTT  236 (249)
Q Consensus       157 r~~e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~~~~~p~~~~~g~~~e~~~  236 (249)
                      |+.++|+|++++++|||+||+.++|+||||||++||+|+|||+++|+++|+|++..|++++.++++|+.|++++++++++
T Consensus       161 r~~e~g~e~ve~~lPavitv~~~~n~PR~pslk~im~A~kk~i~~~~~~dlg~~~~~~~~~~~~~~p~~r~~~~~~~~~~  240 (252)
T 1efp_B          161 REVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGSVD  240 (252)
T ss_dssp             EEETTEEEEEEEESSEEEEECTTSCCCCCCCHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEEEECCCCCCCCEECSSHH
T ss_pred             EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEECCHHHCCCCCCCCEEEEEEECCCCCCCCEECCCHH
T ss_conf             99689489999459779996568787767898899986158841717999498878855999984799884885868999


Q ss_pred             HHHHHHHHHHCCC
Q ss_conf             9999999861769
Q gi|254780368|r  237 KLIEILKSKHDLL  249 (249)
Q Consensus       237 eLv~~L~~e~~vi  249 (249)
                      ||+++|| |++||
T Consensus       241 elv~~L~-e~gvI  252 (252)
T 1efp_B          241 ELVGKLK-EAGVI  252 (252)
T ss_dssp             HHHTTC-------
T ss_pred             HHHHHHH-HCCCC
T ss_conf             9999998-86899