HHsearch results for GI: 254780368 and protein with PDBid: 1efp_B
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=100.00 E-value=0 Score=525.50 Aligned_cols=248 Identities=50% Similarity=0.819 Sum_probs=239.9
Q ss_pred CEEEEEEEEECCCCCCEEECCCCCEEEECCCCEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCC
Q ss_conf 96999860303887605980788816324877332601368999999998559985289999714101588888785077
Q gi|254780368|r 1 MKILVPIKGVINYNTKVRIKNDYSGIETENTKISMNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAMGA 80 (249)
Q Consensus 1 M~I~V~vK~VpD~~~~i~i~~~~~~i~~~~~~~~in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAmGa 80 (249)
|||+||+|||||++++++++++++.+++++++++|||||+||||+||||||+++|++|+++||||++++++||+|||||+
T Consensus 1 MkI~V~vK~VpD~~~~~~i~~~~~~~~~~~~~~~inp~D~~AlE~Al~lke~~~g~~V~v~s~G~~~~~~~lr~alamGa 80 (252)
T 1efp_B 1 MKVLVPVKRLIDYNVKARVKSDGSGVDLANVKMSMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAMGA 80 (252)
T ss_dssp CEEEEECCEEECTTSCCCBCTTSSCBCCTTCCEEECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHHTC
T ss_pred CEEEEEEEECCCCCCEEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHCCC
T ss_conf 97999999677888636883899878224683246854699999999975427980999999663787999998862379
Q ss_pred CCCEEEECC----CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEE
Q ss_conf 762376336----5478899999999986126864999961135888612899999985796133244334328659999
Q gi|254780368|r 81 DRGILIESN----ETLEPLSIAKILREIVKKENPIIVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVT 156 (249)
Q Consensus 81 D~ai~i~d~----~~~D~~~~A~~La~~i~~~~~DLIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~ 156 (249)
|+++++.++ +++|+++||++||.++++.+|||||||+||+|+++||||+++|++|||||+|+|.+++++++.++++
T Consensus 81 d~a~~i~~~~~~~~~~d~~~ta~~la~~~~~~~~DLIl~G~~s~D~~~g~vg~~lAe~Lg~P~vt~v~~ie~~~~~~~v~ 160 (252)
T 1efp_B 81 DRAILVVAADDVQQDIEPLAVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVT 160 (252)
T ss_dssp SEEEEEECCSSTTCCCCHHHHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEE
T ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEEECCEEEEE
T ss_conf 82699992453466778999999999998741999999983256678884216889762898135789999829979999
Q ss_pred EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEECHHHHCCCCCCCEEEEEEECCCCCCCCEEECCHH
Q ss_conf 83589679999639889998435565454698889988521661204989076666845799951788524745537999
Q gi|254780368|r 157 REVGHGTMTMETPLPAVITVDLNLNEPRYISLPNIIKARKKRIEKKKATDFAIDLTPRLKVLRFEENRAERKGLRLYSTT 236 (249)
Q Consensus 157 r~~e~g~e~v~~~lPavisv~~~~n~PR~psl~~im~A~kk~i~~~~~~dlg~d~~~~~~v~~~~~p~~~~~g~~~e~~~ 236 (249)
|+.++|+|++++++|||+||+.++|+||||||++||+|+|||+++|+++|+|++..|++++.++++|+.|++++++++++
T Consensus 161 r~~e~g~e~ve~~lPavitv~~~~n~PR~pslk~im~A~kk~i~~~~~~dlg~~~~~~~~~~~~~~p~~r~~~~~~~~~~ 240 (252)
T 1efp_B 161 REVDGGLQTIAVSLPAVVTADLRLNEPRYASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVREPEGRKAGIKVGSVD 240 (252)
T ss_dssp EEETTEEEEEEEESSEEEEECTTSCCCCCCCHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEEEECCCCCCCCEECSSHH
T ss_pred EECCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEECCHHHCCCCCCCCEEEEEEECCCCCCCCEECCCHH
T ss_conf 99689489999459779996568787767898899986158841717999498878855999984799884885868999
Q ss_pred HHHHHHHHHHCCC
Q ss_conf 9999999861769
Q gi|254780368|r 237 KLIEILKSKHDLL 249 (249)
Q Consensus 237 eLv~~L~~e~~vi 249 (249)
||+++|| |++||
T Consensus 241 elv~~L~-e~gvI 252 (252)
T 1efp_B 241 ELVGKLK-EAGVI 252 (252)
T ss_dssp HHHTTC-------
T ss_pred HHHHHHH-HCCCC
T ss_conf 9999998-86899