HHSEARCH alignment of GI: 254780368 and SCOP domain: d1efva1

Alignment
>d1efva1 c.26.2.3 (A:20-207) Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.02  E-value=1.1e-08  Score=73.13  Aligned_cols=138  Identities=16%  Similarity=0.177  Sum_probs=106.2

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHH-CCCCCEEEECC--CCCCHHHHHHHHHHHHHCCCCC
Q ss_conf             26013689999999985599852899997141015888887850-77762376336--5478899999999986126864
Q gi|254780368|r   35 MNPFDEIALEESLQLREKGIATEVIVVSIGSCKVEEVLKNSLAM-GADRGILIESN--ETLEPLSIAKILREIVKKENPI  111 (249)
Q Consensus        35 in~~D~~AlE~Al~lke~~~g~~V~~lsvG~~~~~~~Lr~alAm-GaD~ai~i~d~--~~~D~~~~A~~La~~i~~~~~D  111 (249)
                      +.+.-.-+|..|-    + .|++|+++.+|+. .+.....++.. |+++.+.+.++  +...+...+.+|++++++.+|+
T Consensus        14 l~~~slE~it~A~----~-lg~~v~avv~G~~-~~~~a~~~~~~~g~~~V~~~~~~~~~~~~~~~~a~~l~~~~~~~~p~   87 (188)
T d1efva1          14 LAPITLNTITAAT----R-LGGEVSCLVAGTK-CDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILATQKQFNYT   87 (188)
T ss_dssp             ECTHHHHHHHHHH----T-TTSEEEEEEEESC-CHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHHHHHHCCS
T ss_pred             ECHHHHHHHHHHH----H-HCCCEEEEEECCC-CHHHHHHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHCCCCCC
T ss_conf             9899999999999----8-5998079998888-26789998725777347860471331133057799999874036887


Q ss_pred             EEEEEECCCCCCCEEHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCC--EEEEEEC-CCEEEEEECCCCCCC
Q ss_conf             999961135888612899999985796133244334328659999835896--7999963-988999843556545
Q gi|254780368|r  112 IVIAGKQTTDNESNQTGQMLAALMRWPQATFVSNIKIIDNHAIVTREVGHG--TMTMETP-LPAVITVDLNLNEPR  184 (249)
Q Consensus       112 LIl~G~~S~D~~~g~v~~~lA~~Lg~p~vt~v~~i~~~~~~~~v~r~~e~g--~e~v~~~-lPavisv~~~~n~PR  184 (249)
                      +||.+.-   ....-+.|++|.+||.++++++..++.++   +++|...+|  ..++++. -|+++|+..+.++|-
T Consensus        88 ~Vl~~~t---~~grdlaprlAa~l~~~~vsdv~~l~~~~---~~~r~~y~Gk~~~~v~~~~~~~i~tvr~~sf~~~  157 (188)
T d1efva1          88 HICAGAS---AFGKNLLPRVAAKLEVAPISDIIAIKSPD---TFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAA  157 (188)
T ss_dssp             EEEEESS---HHHHHHHHHHHHHHTCCCEEEECEEEETT---EEEEEETTTTEEEEEEECCSSEEEEECGGGSCCC
T ss_pred             EEEECCC---HHHHHHHHHHHHHHCCCCCCCEEEECCCC---EEEEEEECCCCEEEEEECCCCEEEEECCCCCCCC
T ss_conf             8998376---78999999999986757425617973599---0888775782149999479988999888766667


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: ETFP subunits
domain: Large, alpha subunit of electron transfer flavoprotein ETFP, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]