HHsearch alignment for GI: 254780369 and conserved domain: PRK03359

Probab=98.64  E-value=1.6e-06  Score=61.66  Aligned_cols=137  Identities=15%  Similarity=0.239  Sum_probs=100.1

Q ss_pred             ECHHHHHHHHHHHHH----CC-CEEEEEECCCH-H--HHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC--C
Q ss_conf             878999999999873----89-34799981892-6--8889987078973999944810100012322455787403--4
Q gi|254780369|r   19 LSEQTARIVTAAQKI----SH-DIHVLVLGDNI-E--NIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIAR--D   88 (318)
Q Consensus        19 l~~~slEll~~A~~l----g~-~v~avv~G~~~-~--~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~--~   88 (318)
T Consensus        34 iNp~De~AlE~AlrlkE~~gg~~VtvvsvG~~~~~~~~~lr~aLA-mGaD~ai~i~d~~~~~~D~~~tA~~La~~i~~~~  112 (256)
T PRK03359         34 ISQYDLNAIEAACQLKQQAAEAQVTALSVGGKALTNAKGRKDVLS-RGPDELIVVIDDQFEQALPQQTASALAAAAQKAG  112 (256)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHH-CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf             686568999999998885199579999937754455999999997-5897289975765444377999999999998729


Q ss_pred             CCEEECCC---CCHHHHHHHHHHHHCCCCEECCCEEE---CCC-CEEEEEEECCCEEEEEEECCCCEEEEECCCCCCC
Q ss_conf             56044157---81034467888875177410132022---468-7279741069526899977984279951686433
Q gi|254780369|r   89 YKTIMASA---NAMGKDILPRVAAMLDVMQVSEVIEI---ISP-KIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPP  159 (318)
Q Consensus        89 ~~~Vl~~~---t~~GrdlaprlAarL~~~~vsdvv~i---~~~-~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~  159 (318)
T Consensus       113 ~DLVl~G~~s~D~~~gqvg~~lAe~Lg~P~vt~v~~i~~~~~~~~~v~R~~e~g~--e~v~~-~lPavvtv~~~~n~P  187 (256)
T PRK03359        113 FDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVSKIISLTADTLTVERELEDEV--ETLSI-PLPAVIAVSTDINSP  187 (256)
T ss_pred             CCEEEEECCCCCCCCCCCCHHHHHHHCCCHHEEEEEEEEECCCEEEEEEECCCCE--EEEEE-CCCEEEEEECCCCCC
T ss_conf             9999992510259998522899998298522007789995399899999857908--99997-699899998898866