HHsearch alignment for GI: 254780369 and conserved domain: PRK03363
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional.
Probab=100.00 E-value=0 Score=656.06 Aligned_cols=301 Identities=26% Similarity=0.425 Sum_probs=262.5
Q ss_pred CEEEEEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 50023489999802975878999999999873893479998189268889987078973999944810100012322455
Q gi|254780369|r 2 TYCDMPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDF 81 (318)
Q Consensus 2 ~~~~M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~ 81 (318)
T Consensus 3 ~~~~--VwVf~e~~~~-----~~ELl~~Ar~L~~~v~a~v~~~~~---~~~~~~-~GAd~V~~v~~~~-~~~~~~~ya~~ 70 (313)
T PRK03363 3 TFSQ--VWVFSDTPSR-----LPELMNGAQALANQINAFVLNDAD---GAQAIQ-LGANHVWKLSGKP-DDRMIEDYAGV 70 (313)
T ss_pred CCCC--EEEEEECCCC-----HHHHHHHHHHHCCEEEEEEECCCC---HHHHHH-HCCCEEEEECCCC-CCCCCHHHHHH
T ss_conf 5571--8999856686-----899999999866825799965602---889997-0898999945762-23334689999
Q ss_pred HHHHCCC--C-CEEECCCCCHHHHHHHHHHHHCCCCEECCCEEEC---CCCEEEEEEECCCEEEEEEECCCCEEEEECCC
Q ss_conf 7874034--5-6044157810344678888751774101320224---68727974106952689997798427995168
Q gi|254780369|r 82 VVSIARD--Y-KTIMASANAMGKDILPRVAAMLDVMQVSEVIEII---SPKIFKRPSYTGNIIQTIETTDTYQIITIRAI 155 (318)
Q Consensus 82 l~~~~~~--~-~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~---~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~ 155 (318)
T Consensus 71 ~~~~i~~~~~~~ivL~~aT~~GrdlAprlAarl~~gl~aD~t~l~~~~~~~~~~~~~~gG~~~~~~~~~~~~~~~Tvrpg 150 (313)
T PRK03363 71 MADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSG 150 (313)
T ss_pred HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCHHHEEEEEECCCCEEEEECCC
T ss_conf 99999975999599984882178899999997398715464799865996269933355131799998899849998999
Q ss_pred CCCCCC-CCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf 643333-5566666156211102445302588544431456667000745641367777833568899999876398597
Q gi|254780369|r 156 AFPPAP-KAEKVASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIG 234 (318)
Q Consensus 156 sf~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG 234 (318)
T Consensus 151 ~f~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~vdL~~A~vVVsgGRG~~~~e~~-~l~~eLA~~LGa~vG 226 (313)
T PRK03363 151 TFDAAQPDASRTGETHTVEWQAPAV---AITRTATQARQSNSVDLDKARLVVSVGRGIGSKENI-ALAEQLCKAIGAELA 226 (313)
T ss_pred CCCCCCCCCCCCCEEEEEECCCCCC---EEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCHHH-HHHHHHHHHHCCCEE
T ss_conf 8787768889862389640237873---269999996136778866599999948765782347-999999998486003
Q ss_pred EEHHHHH-CCCCCHHHHHHCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHH
Q ss_conf 4257886-788888895401597545738999961672645555168988999766599883102764575238999999
Q gi|254780369|r 235 ATRDAVD-AGFAPNDWQIGQTGVTVSPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPE 313 (318)
Q Consensus 235 ~SRp~vD-~gw~p~~~qIG~tG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~ 313 (318)
T Consensus 227 ~SRp~~~d~GW~p~~~QVGqTGktV~P~LYIA~GISGAiQH~aGm~~S~~IVAINkDp~APIF~~ADyGIVGDl~evvP~ 306 (313)
T PRK03363 227 CSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPA 306 (313)
T ss_pred ECCCCCCCCCCCCHHHEECCCCCEECCCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHH
T ss_conf 02311134898986653116894856628999765507888866456888999828989975010787786649999999
Q ss_pred HHHCC
Q ss_conf 88609
Q gi|254780369|r 314 IEKNL 318 (318)
Q Consensus 314 l~~~l 318 (318)
T Consensus 307 L~e~l 311 (313)
T PRK03363 307 LTAAL 311 (313)
T ss_pred HHHHH
T ss_conf 99986