HHsearch alignment for GI: 254780369 and conserved domain: PRK03363

>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional.
Probab=100.00  E-value=0  Score=656.06  Aligned_cols=301  Identities=26%  Similarity=0.425  Sum_probs=262.5

Q ss_pred             CEEEEEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf             50023489999802975878999999999873893479998189268889987078973999944810100012322455
Q gi|254780369|r    2 TYCDMPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDF   81 (318)
Q Consensus         2 ~~~~M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~   81 (318)
T Consensus         3 ~~~~--VwVf~e~~~~-----~~ELl~~Ar~L~~~v~a~v~~~~~---~~~~~~-~GAd~V~~v~~~~-~~~~~~~ya~~   70 (313)
T PRK03363          3 TFSQ--VWVFSDTPSR-----LPELMNGAQALANQINAFVLNDAD---GAQAIQ-LGANHVWKLSGKP-DDRMIEDYAGV   70 (313)
T ss_pred             CCCC--EEEEEECCCC-----HHHHHHHHHHHCCEEEEEEECCCC---HHHHHH-HCCCEEEEECCCC-CCCCCHHHHHH
T ss_conf             5571--8999856686-----899999999866825799965602---889997-0898999945762-23334689999


Q ss_pred             HHHHCCC--C-CEEECCCCCHHHHHHHHHHHHCCCCEECCCEEEC---CCCEEEEEEECCCEEEEEEECCCCEEEEECCC
Q ss_conf             7874034--5-6044157810344678888751774101320224---68727974106952689997798427995168
Q gi|254780369|r   82 VVSIARD--Y-KTIMASANAMGKDILPRVAAMLDVMQVSEVIEII---SPKIFKRPSYTGNIIQTIETTDTYQIITIRAI  155 (318)
Q Consensus        82 l~~~~~~--~-~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~---~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~  155 (318)
T Consensus        71 ~~~~i~~~~~~~ivL~~aT~~GrdlAprlAarl~~gl~aD~t~l~~~~~~~~~~~~~~gG~~~~~~~~~~~~~~~Tvrpg  150 (313)
T PRK03363         71 MADTIRQHGADGLVLLPNTRRGKLLAAKLGYRLKAAVSNDASTVSVQDGKATVKHMVYGGLAIGEERIATPYAVLTISSG  150 (313)
T ss_pred             HHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEECCCCHHHEEEEEECCCCEEEEECCC
T ss_conf             99999975999599984882178899999997398715464799865996269933355131799998899849998999


Q ss_pred             CCCCCC-CCCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEE
Q ss_conf             643333-5566666156211102445302588544431456667000745641367777833568899999876398597
Q gi|254780369|r  156 AFPPAP-KAEKVASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIG  234 (318)
Q Consensus       156 sf~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG  234 (318)
T Consensus       151 ~f~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~vdL~~A~vVVsgGRG~~~~e~~-~l~~eLA~~LGa~vG  226 (313)
T PRK03363        151 TFDAAQPDASRTGETHTVEWQAPAV---AITRTATQARQSNSVDLDKARLVVSVGRGIGSKENI-ALAEQLCKAIGAELA  226 (313)
T ss_pred             CCCCCCCCCCCCCEEEEEECCCCCC---EEEEEEEEECCCCCCCCCCCCEEEECCCCCCCCHHH-HHHHHHHHHHCCCEE
T ss_conf             8787768889862389640237873---269999996136778866599999948765782347-999999998486003


Q ss_pred             EEHHHHH-CCCCCHHHHHHCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHH
Q ss_conf             4257886-788888895401597545738999961672645555168988999766599883102764575238999999
Q gi|254780369|r  235 ATRDAVD-AGFAPNDWQIGQTGVTVSPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPE  313 (318)
Q Consensus       235 ~SRp~vD-~gw~p~~~qIG~tG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~  313 (318)
T Consensus       227 ~SRp~~~d~GW~p~~~QVGqTGktV~P~LYIA~GISGAiQH~aGm~~S~~IVAINkDp~APIF~~ADyGIVGDl~evvP~  306 (313)
T PRK03363        227 CSRPVAENEKWMEHERYVGISNLMLKPELYLAVGISGQIQHMVGANASQTIFAINKDKNAPIFQYADYGIVGDAVKILPA  306 (313)
T ss_pred             ECCCCCCCCCCCCHHHEECCCCCEECCCEEEEECCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHH
T ss_conf             02311134898986653116894856628999765507888866456888999828989975010787786649999999


Q ss_pred             HHHCC
Q ss_conf             88609
Q gi|254780369|r  314 IEKNL  318 (318)
Q Consensus       314 l~~~l  318 (318)
T Consensus       307 L~e~l  311 (313)
T PRK03363        307 LTAAL  311 (313)
T ss_pred             HHHHH
T ss_conf             99986