HHsearch alignment for GI: 254780369 and conserved domain: PRK08199

Probab=95.72  E-value=0.18  Score=29.46  Aligned_cols=115  Identities=19%  Similarity=0.199  Sum_probs=70.6

Q ss_pred             HHHC--CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCH--HHHHHCCCCEE---------CCCEEEE
Q ss_conf             0007--456413677778335688999998763985974257886788888--89540159754---------5738999
Q gi|254780369|r  199 LSSA--KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPN--DWQIGQTGVTV---------SPELYIA  265 (318)
Q Consensus       199 L~~A--~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~--~~qIG~tG~~v---------~P~lYia  265 (318)
T Consensus       195 L~~AkrPvii~G-~g~~~~~a~-~~l~~lae~lg~Pv~tt~~--gkg~~~e~hp~~~G~~g~~~~~~~~~~l~~aDlvl~  270 (553)
T PRK08199        195 LAAAERPLVILG-GSGWTPAAV-ADLRAFAERWGLPVATAFR--RQDLFDNRHPNYAGDLGLGINPALAARIREADLVLA  270 (553)
T ss_pred             HHHCCCCEEEEC-CCCCCHHHH-HHHHHHHHHHCCCEEECCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEE
T ss_conf             984789889937-873554799-9999999985988895145--678888888543666764317999999984897999


Q ss_pred             EEECCHHHHHHH------HCCCCEEEEEECCCCC-CHHHCCCEEEECCHHHHHHHHHHC
Q ss_conf             961672645555------1689889997665998-831027645752389999998860
Q gi|254780369|r  266 AGISGAIQHISG------MKDSKVIVSINTDENA-PIFKISDYFIVGDIFKILPEIEKN  317 (318)
Q Consensus       266 ~GISGa~qH~~G------~~~s~~IvAIN~D~~A-pIf~~ad~giv~D~~~vlp~l~~~  317 (318)
T Consensus       271 lG~~l~~~~t~~~~~~~~~~~~~~iI~id~d~~~l~~~~~~d~~i~~d~~~~l~~L~~~  329 (553)
T PRK08199        271 VGTRLGEATTQGYTLLDIPVPRQTLVHVHPDAEELGRVYRPDLAIVADPAAFAAALAAL  329 (553)
T ss_pred             ECCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCCCCCEEEECCHHHHHHHHHCC
T ss_conf             82624766678864356788875599956898996875579745851899999999705