HHsearch alignment for GI: 254780369 and conserved domain: PRK08322

Probab=97.42  E-value=0.0008  Score=44.49  Aligned_cols=117  Identities=21%  Similarity=0.222  Sum_probs=76.1

Q ss_pred             HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCH--HHHHHCCCCE---------ECCCEEEEE
Q ss_conf             0007-456413677778335688999998763985974257886788888--8954015975---------457389999
Q gi|254780369|r  199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPN--DWQIGQTGVT---------VSPELYIAA  266 (318)
Q Consensus       199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~--~~qIG~tG~~---------v~P~lYia~  266 (318)
T Consensus       193 L~~AkrPvIi~G~g~~~~~a~-~~l~~lae~l~~PV~tt~~gk--g~~p~~hp~~~G~~g~~~~~~~~~~i~~aDlvl~i  269 (547)
T PRK08322        193 IQAAKNPLILIGAGANRKTAS-KALTEFVDKTGIPFFTTQMGK--GVIPETHPLSLGTAGLSQGDYVHCAIEHADLIINV  269 (547)
T ss_pred             HHHCCCCEEECCCCCCCHHHH-HHHHHHHHHHCCCEEEECCCC--CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEE
T ss_conf             972689789868885734099-999999998299789604677--77798874114555445669999877649868981


Q ss_pred             EECCHHHHHHHH--CCCCEEEEEECCCCCC-HHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf             616726455551--6898899976659988-310276457523899999988609
Q gi|254780369|r  267 GISGAIQHISGM--KDSKVIVSINTDENAP-IFKISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       267 GISGa~qH~~G~--~~s~~IvAIN~D~~Ap-If~~ad~giv~D~~~vlp~l~~~l  318 (318)
T Consensus       270 G~~l~~~~~~~~~~~~~~~vI~id~d~~~~~~~~~~~~~i~gD~~~~l~~l~~~l  324 (547)
T PRK08322        270 GHDVIEKPPFFMNPNGDKKVIHINFLPAEVDPVYFPQVEVVGDIANSLWQLKERL  324 (547)
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf             5425655732214789964999729988839765788225338999999999861