HHsearch alignment for GI: 254780369 and conserved domain: PRK09124

Probab=97.33  E-value=0.001  Score=43.77  Aligned_cols=113  Identities=20%  Similarity=0.218  Sum_probs=73.7

Q ss_pred             HHHCC-EEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCC--HHHHHHCCCCE---------ECCCEEEEE
Q ss_conf             00074-5641367777833568899999876398597425788678888--88954015975---------457389999
Q gi|254780369|r  199 LSSAK-IVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAP--NDWQIGQTGVT---------VSPELYIAA  266 (318)
Q Consensus       199 L~~A~-iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p--~~~qIG~tG~~---------v~P~lYia~  266 (318)
T Consensus       198 L~~A~rPvi~~G~G~~~--a~-~~l~~lAe~lg~PV~tt~~g--kg~i~~~hPl~~G~~G~~g~~~~~~~l~~aDlvl~l  272 (574)
T PRK09124        198 LNGSKAITLLCGSGCAG--AH-DELVALADTLKAPIVHALRG--KEHVEYDNPYDVGMTGLIGFSSGYHAMMNCDTLLML  272 (574)
T ss_pred             HHCCCCCEEEECCCHHH--HH-HHHHHHHHHHCCCEEEECCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEE
T ss_conf             85579978997910323--79-99999999859988960567--778887685114656667878999998438819997


Q ss_pred             EECCHHHHHHHHCCCCEEEEEECCCCCCHH-HCCCEEEECCHHHHHHHHHHCC
Q ss_conf             616726455551689889997665998831-0276457523899999988609
Q gi|254780369|r  267 GISGAIQHISGMKDSKVIVSINTDENAPIF-KISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       267 GISGa~qH~~G~~~s~~IvAIN~D~~ApIf-~~ad~giv~D~~~vlp~l~~~l  318 (318)
T Consensus       273 Gt~~--~~~~~~p~~~kvi~Id~d~~~lg~~~~~~~~i~gD~~~~L~~L~~~l  323 (574)
T PRK09124        273 GTDF--PYRQFYPTDAKIIQIDINPGSLGRRSPVDLGLVGDVKATLAALLPLL  323 (574)
T ss_pred             CCCC--CCCCCCCCCCEEEEEECCHHHHCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf             3677--75431699985999858989947767886468568999999999862