HHsearch results for GI: 254780369 and protein with PDBid: 1efp_A
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=100.00 E-value=0 Score=682.36 Aligned_cols=306 Identities=45% Similarity=0.787 Sum_probs=281.7
Q ss_pred EEEEEEEECCCEECH-HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 489999802975878-9999999998738934799981892688899870789739999448101000123224557874
Q gi|254780369|r 7 PVLLLADYNQENLSE-QTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSI 85 (318)
Q Consensus 7 ~ilV~~E~~~g~l~~-~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~ 85 (318)
+||||+||+||+|++ +++|++++||+|| +++++++|++.++.++++.+++|+|+||.++++.|.+|.++.|+.++.++
T Consensus 1 sILViaE~~~G~l~~~st~Ell~aAr~lg-dv~alv~G~~~~~~a~~l~~~~GadkV~~~d~~~l~~y~~e~~a~~l~~~ 79 (307)
T 1efp_A 1 AVLLLGEVTNGALNRDATAKAVAAVKALG-DVTVLCAGASAKAAAEEAAKIAGVAKVLVAEDALYGHRLAEPTAALIVGL 79 (307)
T ss_dssp CEEEECCBSSSCBCHHHHHHHHHHHGGGS-CEEEEEEETTCHHHHHHHHTSTTEEEEEEEECGGGTTCCHHHHHHHHHHH
T ss_pred CEEEEEEECCCEECHHHHHHHHHHHHHHC-CCEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf 98999996599988889999999998409-81799988995799999863569878999567200124413689998753
Q ss_pred CCCCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCC
Q ss_conf 03456044157810344678888751774101320224687279741069526899977984279951686433335566
Q gi|254780369|r 86 ARDYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEIISPKIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKAEK 165 (318)
Q Consensus 86 ~~~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~~~ 165 (318)
+++++++|+|+|++||||+||||+||++++++||++++.+..++|+.|+|+...++.+...++++|+||++|.+.+....
T Consensus 80 ~~~~~~vL~~~T~~GrdlaprlAarl~~gl~ad~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~~f~~~~~~~~ 159 (307)
T 1efp_A 80 AGDYSHIAAPATTDAKNVMPRVAALLDVMVLSDVSAILDADTFERPIYAGNAIQVVKSKDAKKVFTIRTASFDAAGEGGT 159 (307)
T ss_dssp HTTCSEEEEESSHHHHHHHHHHHHHTTCCEEEEESEECSSSEEEEEEGGGTEEEEEEECSSSEEEEECGGGSCCCCSSCC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCCC
T ss_conf 03456599814742125778999985788545530785398389999746159999826886079972576666556787
Q ss_pred CCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCC
Q ss_conf 66615621110244530258854443145666700074564136777783356889999987639859742578867888
Q gi|254780369|r 166 VASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFA 245 (318)
Q Consensus 166 ~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~ 245 (318)
...++..... +. ...+.+.....+.++++|++|++|||+|||++++||| +++++||++|||++|||||+||+||+
T Consensus 160 -~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~l~~A~iVVs~GRG~g~~en~-~l~~eLA~~Lga~vgaSR~~vD~gw~ 234 (307)
T 1efp_A 160 -APVTETAAAA-DP--GLSSWVADEVAESDRPELTSARRVVSGGRGLGSKESF-AIIEELADKLGAAVGASRAAVDSGYA 234 (307)
T ss_dssp -CCCBCCCCCC-CC--CSEEEEEEEECCCCSCCTTTCSEEEEECGGGCSSSTT-HHHHHHHHHHTCEEEECHHHHHTTSS
T ss_pred -CCEEEECCCC-CC--CCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCHH-HHHHHHHHHHCCCEEECHHHHHCCCC
T ss_conf -6245522346-87--7515788874201345456630899768765565206-89999999869837843778757899
Q ss_pred CHHHHHHCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 8889540159754573899996167264555516898899976659988310276457523899999988609
Q gi|254780369|r 246 PNDWQIGQTGVTVSPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 246 p~~~qIG~tG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
||+||||||||+|+|+||||||||||+|||+||++|++||||||||+||||++||||||||++||||+|+|+|
T Consensus 235 p~~~qIGqtG~~V~P~lYia~GISGa~QH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 307 (307)
T 1efp_A 235 PNDWQVGQTGKVVAPELYVAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 307 (307)
T ss_dssp CGGGBBSSSSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHTC
T ss_pred CCCCEEECCCEEECCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHHC
T ss_conf 8222670687450765899962332588887614698899983899998510079889664999999998519