HHsearch results for GI: 254780369 and protein with PDBid: 1efv_A
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=100.00 E-value=0 Score=695.06 Aligned_cols=309 Identities=41% Similarity=0.702 Sum_probs=286.1
Q ss_pred EEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf 34899998029758789999999998738934799981892688899870789739999448101000123224557874
Q gi|254780369|r 6 MPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSI 85 (318)
Q Consensus 6 M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~ 85 (318)
|++|||+||+||+|++.|+|++++||+||++++++++|.+.+..+.++++++|+|+||.++++.|..|.++.|+++++++
T Consensus 2 ~s~LV~aE~~~g~l~~~s~Ell~~A~~Lg~~v~avv~G~~~~~~a~~l~~~~Gad~V~~~~~~~~~~~~~e~~a~al~~~ 81 (315)
T 1efv_A 2 QSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILAT 81 (315)
T ss_dssp CEEEEECCEETTEECTHHHHHHHHHHTTTSEEEEEEEESCCHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHH
T ss_pred CEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 41899999479999999999999999858974899988880899999851369878999458202035603457899888
Q ss_pred CC--CCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf 03--4560441578103446788887517741013202246872797410695268999779842799516864333355
Q gi|254780369|r 86 AR--DYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEIISPKIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKA 163 (318)
Q Consensus 86 ~~--~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~ 163 (318)
++ +|++||+|+|++||||+||||+||++++++||++++.+..++||+|+|+.++++++...++++|+|+++|++.+..
T Consensus 82 ~~~~~p~~VL~~~T~~GrdlaprLAarL~~g~vsdv~~l~~~~~~~r~~~~g~~~~~~~~~~~~~~~tvr~~~f~~~~~~ 161 (315)
T 1efv_A 82 QKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATS 161 (315)
T ss_dssp HHHHCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECEEEETTEEEEEETTTTEEEEEEECCSSEEEEECGGGSCCCCSS
T ss_pred HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCC
T ss_conf 75148548996377436678999999809971516899945995999997453179996247614887415643454455
Q ss_pred CCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCC
Q ss_conf 66666156211102445302588544431456667000745641367777833568899999876398597425788678
Q gi|254780369|r 164 EKVASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAG 243 (318)
Q Consensus 164 ~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~g 243 (318)
......... ... ......+.++.......+++|++|++|||+|||++++||| +++++||++|||++|||||+||+|
T Consensus 162 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~L~~A~vVVs~GrG~~~~e~~-~~~~eLA~~LgaavGaSR~~vD~G 237 (315)
T 1efv_A 162 GGSASSEKA-SST--SPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENF-KLLYDLADQLHAAVGASRAAVDAG 237 (315)
T ss_dssp SCCCEEEEC-CCC--CCCCSEEEEEEEECCCCSCCGGGCSEEEEECGGGCSTGGG-HHHHHHHHHHTCEEEECHHHHHTT
T ss_pred CCCCEEEEC-CCC--CCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHH-HHHHHHHHHHCCCEEEEHHHHHCC
T ss_conf 687505750-346--7631101111221123665434415999658755671356-679999998568678712675489
Q ss_pred CCCHHHHHHCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 888889540159754573899996167264555516898899976659988310276457523899999988609
Q gi|254780369|r 244 FAPNDWQIGQTGVTVSPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 244 w~p~~~qIG~tG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
|+||++||||||++|+|+||||||||||+||++||++|++||||||||+||||++||||||||+++|||+|+|+|
T Consensus 238 w~p~~~qIGqtG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~aD~giVgD~~~vlp~l~e~l 312 (315)
T 1efv_A 238 FVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL 312 (315)
T ss_dssp SSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCEEECCCEECCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCHHHCCEEEECCHHHHHHHHHHHH
T ss_conf 998000870687686777699970477088887523598899983899998431289899760999999999998