HHsearch results for GI: 254780369 and protein with PDBid: 1efv_A

>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=100.00  E-value=0  Score=695.06  Aligned_cols=309  Identities=41%  Similarity=0.702  Sum_probs=286.1

Q ss_pred             EEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH
Q ss_conf             34899998029758789999999998738934799981892688899870789739999448101000123224557874
Q gi|254780369|r    6 MPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNIENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSI   85 (318)
Q Consensus         6 M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~   85 (318)
                      |++|||+||+||+|++.|+|++++||+||++++++++|.+.+..+.++++++|+|+||.++++.|..|.++.|+++++++
T Consensus         2 ~s~LV~aE~~~g~l~~~s~Ell~~A~~Lg~~v~avv~G~~~~~~a~~l~~~~Gad~V~~~~~~~~~~~~~e~~a~al~~~   81 (315)
T 1efv_A            2 QSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGIAKVLVAQHDVYKGLLPEELTPLILAT   81 (315)
T ss_dssp             CEEEEECCEETTEECTHHHHHHHHHHTTTSEEEEEEEESCCHHHHHHHHHSTTCCEEEEEECGGGTTCCHHHHHHHHHHH
T ss_pred             CEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf             41899999479999999999999999858974899988880899999851369878999458202035603457899888


Q ss_pred             CC--CCCEEECCCCCHHHHHHHHHHHHCCCCEECCCEEECCCCEEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCC
Q ss_conf             03--4560441578103446788887517741013202246872797410695268999779842799516864333355
Q gi|254780369|r   86 AR--DYKTIMASANAMGKDILPRVAAMLDVMQVSEVIEIISPKIFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAPKA  163 (318)
Q Consensus        86 ~~--~~~~Vl~~~t~~GrdlaprlAarL~~~~vsdvv~i~~~~~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~~~  163 (318)
                      ++  +|++||+|+|++||||+||||+||++++++||++++.+..++||+|+|+.++++++...++++|+|+++|++.+..
T Consensus        82 ~~~~~p~~VL~~~T~~GrdlaprLAarL~~g~vsdv~~l~~~~~~~r~~~~g~~~~~~~~~~~~~~~tvr~~~f~~~~~~  161 (315)
T 1efv_A           82 QKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATS  161 (315)
T ss_dssp             HHHHCCSEEEEESSHHHHHHHHHHHHHHTCCCEEEECEEEETTEEEEEETTTTEEEEEEECCSSEEEEECGGGSCCCCSS
T ss_pred             HHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCEEEEEECCCCEEEEECCCCCCCCCCC
T ss_conf             75148548996377436678999999809971516899945995999997453179996247614887415643454455


Q ss_pred             CCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCC
Q ss_conf             66666156211102445302588544431456667000745641367777833568899999876398597425788678
Q gi|254780369|r  164 EKVASIHKISAEVLEKYISNTRFIKEERTSLSPTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAG  243 (318)
Q Consensus       164 ~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~g  243 (318)
                      ......... ...  ......+.++.......+++|++|++|||+|||++++||| +++++||++|||++|||||+||+|
T Consensus       162 ~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~L~~A~vVVs~GrG~~~~e~~-~~~~eLA~~LgaavGaSR~~vD~G  237 (315)
T 1efv_A          162 GGSASSEKA-SST--SPVEISEWLDQKLTKSDRPELTGAKVVVSGGRGLKSGENF-KLLYDLADQLHAAVGASRAAVDAG  237 (315)
T ss_dssp             SCCCEEEEC-CCC--CCCCSEEEEEEEECCCCSCCGGGCSEEEEECGGGCSTGGG-HHHHHHHHHHTCEEEECHHHHHTT
T ss_pred             CCCCEEEEC-CCC--CCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCHHH-HHHHHHHHHHCCCEEEEHHHHHCC
T ss_conf             687505750-346--7631101111221123665434415999658755671356-679999998568678712675489


Q ss_pred             CCCHHHHHHCCCCEECCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf             888889540159754573899996167264555516898899976659988310276457523899999988609
Q gi|254780369|r  244 FAPNDWQIGQTGVTVSPELYIAAGISGAIQHISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       244 w~p~~~qIG~tG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l  318 (318)
                      |+||++||||||++|+|+||||||||||+||++||++|++||||||||+||||++||||||||+++|||+|+|+|
T Consensus       238 w~p~~~qIGqtG~~v~P~lYia~GISGa~qH~~G~~~s~~IvAIN~D~~ApIf~~aD~giVgD~~~vlp~l~e~l  312 (315)
T 1efv_A          238 FVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEIL  312 (315)
T ss_dssp             SSCGGGBBSTTSBCCCCSEEEEESCCCCHHHHTTTTTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHT
T ss_pred             CCCCCCEEECCCEECCCCEEEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCHHHCCEEEECCHHHHHHHHHHHH
T ss_conf             998000870687686777699970477088887523598899983899998431289899760999999999998