HHsearch results for GI: 254780369 and protein with PDBid: 1q1a_A

>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*

Probab=94.88  E-value=0.028  Score=33.27  Aligned_cols=65  Identities=15%  Similarity=0.087  Sum_probs=46.6

Q ss_pred             CCCEECCCEEEEEEECCHHHHHHH---H-CCCCEEEEEECCCCC---CHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf             597545738999961672645555---1-689889997665998---8310276457523899999988609
Q gi|254780369|r  254 TGVTVSPELYIAAGISGAIQHISG---M-KDSKVIVSINTDENA---PIFKISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       254 tG~~v~P~lYia~GISGa~qH~~G---~-~~s~~IvAIN~D~~A---pIf~~ad~giv~D~~~vlp~l~~~l  318 (318)
                      ....-+.+|.|.+|-|++++=..+   . +....+|-||.++-.   +-...+|+.|-||.-+++|+|.++|
T Consensus       206 ~~~~~~~Dl~lviGTSl~V~Pa~~l~~~a~~~~~~viIN~~~~~~~~~~~~~~Dl~i~g~~~evl~~L~~~L  277 (289)
T 1q1a_A          206 SGKHPQQPLVIVVGTSLAVYPFASLPEEIPRKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEEL  277 (289)
T ss_dssp             ----CCCCEEEEESCCCCEETTTHHHHHSCTTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHHH
T ss_pred             HHHCCCCCEEEEECCCCEECCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHC
T ss_conf             653045888999799953517888999996289789997987888765567657899686999999999982