HHsearch results for GI: 254780369 and protein with PDBid: 3lq1_A
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=91.43 E-value=0.72 Score=24.28 Aligned_cols=118 Identities=18% Similarity=0.083 Sum_probs=67.6
Q ss_pred HHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEH-H--HHH----CCCCCHHHHHHCCC---CEECCCEEEEEEE
Q ss_conf 000745641367777833568899999876398597425-7--886----78888889540159---7545738999961
Q gi|254780369|r 199 LSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATR-D--AVD----AGFAPNDWQIGQTG---VTVSPELYIAAGI 268 (318)
Q Consensus 199 L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SR-p--~vD----~gw~p~~~qIG~tG---~~v~P~lYia~GI 268 (318)
+..++.++.+|. ++..+.. +.+.+||+.||+-+-.+- . ... ..+.......+... .....++-|.+|-
T Consensus 221 ~~~~~~iii~~g-~~~~~~~-~~l~~lae~l~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aD~vl~lG~ 298 (578)
T 3lq1_A 221 CTGKKGVFVVGP-IDKKELE-QPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAFLKEAEIIDKLTPEVVIRFGS 298 (578)
T ss_dssp TTTSCEEEEECS-CCCTTCH-HHHHHHHHHHTCCEEECGGGSTTSBSSCCSSEECCHHHHTTSHHHHHHTCCSEEEEESS
T ss_pred HCCCCEEEEECC-CCCHHHH-HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECC
T ss_conf 548974999424-4625678-99999998517760321334666677654433564210046898862458788999788
Q ss_pred CCHHHHHHHH---CCCCEEEEEECCCCC-CHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf 6726455551---689889997665998-8310276457523899999988609
Q gi|254780369|r 269 SGAIQHISGM---KDSKVIVSINTDENA-PIFKISDYFIVGDIFKILPEIEKNL 318 (318)
Q Consensus 269 SGa~qH~~G~---~~s~~IvAIN~D~~A-pIf~~ad~giv~D~~~vlp~l~~~l 318 (318)
.-......+. ..-..+|-|+.|+.- .-+...+..+.+|...++..|.+.+
T Consensus 299 ~~~~~~~~~~~~~~~~~~~i~vd~~~~~~~~~~~~~~~i~~d~~~~~~~l~~~~ 352 (578)
T 3lq1_A 299 MPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNM 352 (578)
T ss_dssp CCSCHHHHHHHHHCCSSEEEEECTTCCCCCTTCCCSEEECSCHHHHHHHHHHHS
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHC
T ss_conf 665544456554554204899648521136653333112465888899887524