HHSEARCH alignment of GI: 254780369 and SCOP domain: d1efpb_

Alignment
>d1efpb_ c.26.2.3 (B:) Small, beta subunit of electron transfer flavoprotein ETFP {Paracoccus denitrificans [TaxId: 266]}
Probab=98.70  E-value=2.5e-06  Score=57.53  Aligned_cols=170  Identities=15%  Similarity=0.153  Sum_probs=110.4

Q ss_pred             EECHHHHHHHHHHHHH----CC-CEEEEEECCCH-HHHHHHHHCCCCCCEEEEECC--CHHHHHHHHHHHHHHHHHCC--
Q ss_conf             5878999999999873----89-34799981892-688899870789739999448--10100012322455787403--
Q gi|254780369|r   18 NLSEQTARIVTAAQKI----SH-DIHVLVLGDNI-ENIAQQAARIQGVTQVIVAQS--TIFRHKLAGPVSDFVVSIAR--   87 (318)
Q Consensus        18 ~l~~~slEll~~A~~l----g~-~v~avv~G~~~-~~~a~~~~~~~Gad~V~~~~~--~~~~~~~~~~~a~~l~~~~~--   87 (318)
                      .+++...-+|-.|-+|    ++ +|+++.+|... ++...+++.. |+|+-+.+.+  ..+....+-..+.+++..++  
T Consensus        34 viNp~D~~AlE~Al~lke~~~g~~Vtvls~Gp~~a~~~lr~alAm-GaD~avli~~~~~~~~~~d~~ata~~la~~~~~~  112 (246)
T d1efpb_          34 SMNPFDEIAVEEAIRLKEKGQAEEIIAVSIGVKQAAETLRTALAM-GADRAILVVAADDVQQDIEPLAVAKILAAVARAE  112 (246)
T ss_dssp             EECHHHHHHHHHHHHHHTTTSCSEEEEEEEESGGGHHHHHHHHHH-TCSEEEEEECCSSTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHH-CCCHHEEEEECCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf             468557999999998742289719999996474248999988860-5770048860355344658999999999987500


Q ss_pred             CCCEEECCCC---CHHHHHHHHHHHHCCCCEECCCEEEC--CCC-EEEEEEECCCEEEEEEECCCCEEEEECCCCCCCCC
Q ss_conf             4560441578---10344678888751774101320224--687-27974106952689997798427995168643333
Q gi|254780369|r   88 DYKTIMASAN---AMGKDILPRVAAMLDVMQVSEVIEII--SPK-IFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPAP  161 (318)
Q Consensus        88 ~~~~Vl~~~t---~~GrdlaprlAarL~~~~vsdvv~i~--~~~-~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~~  161 (318)
                      +|++||++.-   ...-.+.|.||.+|+.++++.+++++  ++. +++|..=+|  .++++. ..|+++|+.++..+|.-
T Consensus       113 ~~DLIl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~~i~~~~~~i~v~R~~e~g--~e~v~~-~lPavltv~~~~n~PR~  189 (246)
T d1efpb_         113 GTELIIAGKQAIDNDMNATGQMLAAILGWAQATFASKVEIEGAKAKVTREVDGG--LQTIAV-SLPAVVTADLRLNEPRY  189 (246)
T ss_dssp             TCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEEEEEEEEECSSEEEEEEEETTE--EEEEEE-ESSEEEEECTTSCCCCC
T ss_pred             CCCEEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEEECCCEEEEEEECCCC--EEEEEE-CCCEEEEEECCCCCCCC
T ss_conf             898999973302346641328999986265156799999818779999991698--899996-58769997668777665


Q ss_pred             CC------CCCCCEEEEECCCCC-CCCEEEEEEEEEE
Q ss_conf             55------666661562111024-4530258854443
Q gi|254780369|r  162 KA------EKVASIHKISAEVLE-KYISNTRFIKEER  191 (318)
Q Consensus       162 ~~------~~~~~v~~~~~~~~~-~~~~~~~~i~~~~  191 (318)
                      +.      .....++..+..... .....+++....+
T Consensus       190 pslk~im~A~kk~i~~~~~~dlgl~~~~~~~v~~~~~  226 (246)
T d1efpb_         190 ASLPNIMKAKKKPLDEKTAADYGVDVAPRLEVVSVRE  226 (246)
T ss_dssp             CCHHHHHHHTTSCEEEEEGGGGTCCCCCSEEEEEEEC
T ss_pred             CCHHHHHHHHCCCCEECCHHHCCCCCCCCEEEEEEEC
T ss_conf             5577899871588517589994977789569999846


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: ETFP subunits
domain: Small, beta subunit of electron transfer flavoprotein ETFP
species: Paracoccus denitrificans [TaxId: 266]