HHSEARCH alignment of GI: 254780369 and SCOP domain: d1pvda1

Alignment

Probab=94.23  E-value=0.034  Score=31.19  Aligned_cols=117  Identities=15%  Similarity=0.027  Sum_probs=71.6

Q ss_pred             HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCC--HHHHHHCC-CCEE---------CCCEEEE
Q ss_conf             0007-45641367777833568899999876398597425788678888--88954015-9754---------5738999
Q gi|254780369|r  199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAP--NDWQIGQT-GVTV---------SPELYIA  265 (318)
Q Consensus       199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p--~~~qIG~t-G~~v---------~P~lYia  265 (318)
                      |.+| +-++-.|+|+...... +.+.+||+.+|+-+-.|-..  .|.+|  |...+|.. |..-         ..||-|+
T Consensus        27 l~~AkrPvii~G~g~~~~~a~-~~l~~lae~~~~Pv~tt~~g--kg~~~e~hp~~~G~~~g~~~~~~~~~~~~~aDlvl~  103 (179)
T d1pvda1          27 VKDAKNPVILADACCSRHDVK-AETKKLIDLTQFPAFVTPMG--KGSISEQHPRYGGVYVGTLSKPEVKEAVESADLILS  103 (179)
T ss_dssp             HHHCSSEEEEECGGGTTTSTH-HHHHHHHHHHCCCEEECGGG--TTSSCTTSTTEEEECCSTTSCHHHHHHHHTCSEEEE
T ss_pred             HHHCCCCEEEEECCCCHHHHH-HHHHHHHHHHCCEEEECCCC--CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
T ss_conf             985789789985550143407-99999999627538854555--555444565556464334477999997642887999


Q ss_pred             EEECCHHHHHHH---HCCCCEEEEEECCCCCC-HHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf             961672645555---16898899976659988-310276457523899999988609
Q gi|254780369|r  266 AGISGAIQHISG---MKDSKVIVSINTDENAP-IFKISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       266 ~GISGa~qH~~G---~~~s~~IvAIN~D~~Ap-If~~ad~giv~D~~~vlp~l~~~l  318 (318)
                      +|-.=.-.+..+   .-+...+|-|+.|+.-= =..+.+..+++|+.+++.+|.+++
T Consensus       104 lG~~~~d~~t~~~~~~~~~~~iI~i~~d~~~i~~~~~~~v~i~~~l~~ll~~l~~~~  160 (179)
T d1pvda1         104 VGALLSDFNTGSFSYSYKTKNIVEFHSDHMKIRNATFPGVQMKFVLQKLLTNIADAA  160 (179)
T ss_dssp             ESCCCCC----------CCCEEEEEETTEEEETTEEEETCCHHHHHHHHHHHHHHHT
T ss_pred             ECCCCCCCCCCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             757766532686765699984899969999959844578249999999999999887

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Pyruvate decarboxylase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]