HHSEARCH alignment of GI: 254780369 and SCOP domain: d1q6za1

Alignment
>d1q6za1 c.31.1.3 (A:182-341) Benzoylformate decarboxylase {Pseudomonas putida [TaxId: 303]}
Probab=97.51  E-value=1.4e-05  Score=52.84  Aligned_cols=119  Identities=16%  Similarity=0.049  Sum_probs=79.4

Q ss_pred             HHHC-CEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEE-HHHHHCCCCCHHHHHHCCCCE--------ECCCEEEEEEE
Q ss_conf             0007-4564136777783356889999987639859742-578867888888954015975--------45738999961
Q gi|254780369|r  199 LSSA-KIVISGGKSFGSMENFHKLLLPLAKKLGAAIGAT-RDAVDAGFAPNDWQIGQTGVT--------VSPELYIAAGI  268 (318)
Q Consensus       199 L~~A-~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~S-Rp~vD~gw~p~~~qIG~tG~~--------v~P~lYia~GI  268 (318)
                      |..| +-|+=.|+|+...+.+ +.+.+||++||+-+-+| ...-..-+-.|..++|.-|..        =..++.|++|.
T Consensus        16 l~~A~rPvii~G~g~~~~~~~-~~l~~lae~l~~pv~~t~~~~~~~~~~~~p~~~G~~~~~~~~~~~~l~~aDlil~lG~   94 (160)
T d1q6za1          16 LNSASNPAIVLGPDVDAANAN-ADCVMLAERLKAPVWVAPSAPRCPFPTRHPCFRGLMPAGIAAISQLLEGHDVVLVIGA   94 (160)
T ss_dssp             HHHCSSCEEEECHHHHHTTCH-HHHHHHHHHHTCCEEECSSCSBCCSCTTSTTEEEECCSCHHHHHHHHTTCSEEEEESS
T ss_pred             HHHCCCEEEEECCCCCCCCCC-HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEC
T ss_conf             981899799989581413251-6899999865953886310036633444333000056576799999952995999912


Q ss_pred             CCHHHHHHHH----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf             6726455551----6898899976659988310276457523899999988609
Q gi|254780369|r  269 SGAIQHISGM----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       269 SGa~qH~~G~----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l  318 (318)
                      +=--++..+.    .....||.|+.|++.--....|++|+||+.++|++|+++|
T Consensus        95 ~l~~~~~~~~~~~~~~~~~ii~v~~d~~~~~~~~~~~~i~~D~~~~l~~L~~~l  148 (160)
T d1q6za1          95 PVFRYHQYDPGQYLKPGTRLISVTCDPLEAARAPMGDAIVADIGAMASALANLV  148 (160)
T ss_dssp             CTTCCCSCCCSCSSCTTCEEEEEESCHHHHHHCSSSEEEESCHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECCHHHHCCCCCCEEEEECHHHHHHHHHHHC
T ss_conf             643333332211124675599851899995887899069859999999999851


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Pyruvate oxidase and decarboxylase, middle domain
domain: Benzoylformate decarboxylase
species: Pseudomonas putida [TaxId: 303]