HHSEARCH alignment of GI: 254780369 and SCOP domain: d1s5pa_

Alignment
>d1s5pa_ c.31.1.5 (A:) NAD-dependent deacetylase CobB {Escherichia coli [TaxId: 562]}
Probab=95.80  E-value=0.0078  Score=35.30  Aligned_cols=58  Identities=21%  Similarity=0.330  Sum_probs=46.8

Q ss_pred             CCEEEEEEECCHHHHHHHH-----CCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf             7389999616726455551-----6898899976659988310276457523899999988609
Q gi|254780369|r  260 PELYIAAGISGAIQHISGM-----KDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       260 P~lYia~GISGa~qH~~G~-----~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l  318 (318)
                      .++.|.+|-|++++=...+     +.-..+|-||.+| .+.-+.+|+-|-||..|+||+|.++|
T Consensus       168 aDlllviGTSl~V~pa~~l~~~a~~~g~~iiiIN~~~-t~~~~~~~~~i~g~a~e~l~~l~~~l  230 (235)
T d1s5pa_         168 ADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEP-SQVGNEFAEKYYGPASQVVPEFVEKL  230 (235)
T ss_dssp             CSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSS-CC---CCSEEEESCHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCC-CCCCCCCCEEEECCHHHHHHHHHHHH
T ss_conf             7989998669831678899999998598499989999-99987226899698999999999999


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: Sir2 family of transcriptional regulators
domain: NAD-dependent deacetylase CobB
species: Escherichia coli [TaxId: 562]