HHSEARCH alignment of GI: 254780369 and SCOP domain: d1uana_

Alignment

Probab=93.13  E-value=0.13  Score=27.55  Aligned_cols=92  Identities=14%  Similarity=0.008  Sum_probs=48.7

Q ss_pred             EEEEEEEEECCCEECHHHHHHHHHHHHHCCCEEEEEECCCH----------HHHHHHHHCCCCCCEEEEECCCHHHHHHH
Q ss_conf             34899998029758789999999998738934799981892----------68889987078973999944810100012
Q gi|254780369|r    6 MPVLLLADYNQENLSEQTARIVTAAQKISHDIHVLVLGDNI----------ENIAQQAARIQGVTQVIVAQSTIFRHKLA   75 (318)
Q Consensus         6 M~ilV~~E~~~g~l~~~slEll~~A~~lg~~v~avv~G~~~----------~~~a~~~~~~~Gad~V~~~~~~~~~~~~~   75 (318)
                      |+|||++-|.+...--. --.|.+-.+-|.+|.++++..+.          ...+..+.+..|++.+...+-+...-...
T Consensus         2 ~~VLvi~aHPDDe~lg~-GGtiak~~~~G~~V~vv~~T~G~~~~~~~~~~R~~E~~~a~~~lG~~~~~~l~~~d~~l~~~   80 (227)
T d1uana_           2 LDLLVVAPHPDDGELGC-GGTLARAKAEGLSTGILDLTRGEMGSKGTPEEREKEVAEASRILGLDFRGNLGFPDGGLADV   80 (227)
T ss_dssp             EEEEEEESSTTHHHHHH-HHHHHHHHHTTCCEEEEEEECCTTTCCSCHHHHHHHHHHHHHHHTCSEEEEEEECTTCCCCC
T ss_pred             CEEEEEEECCCHHHHHH-HHHHHHHHHCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEEEECCCCCCCC
T ss_conf             64999974887578878-99999999769939999974897888776156677777666423533110122214554344


Q ss_pred             HHHHHHHHHHCC--CCCEEECCCCC
Q ss_conf             322455787403--45604415781
Q gi|254780369|r   76 GPVSDFVVSIAR--DYKTIMASANA   98 (318)
Q Consensus        76 ~~~a~~l~~~~~--~~~~Vl~~~t~   98 (318)
                      ......+.++++  +|++|+.++..
T Consensus        81 ~~~~~~l~~~i~~~~PdiV~t~~~~  105 (227)
T d1uana_          81 PEQRLKLAQALRRLRPRVVFAPLEA  105 (227)
T ss_dssp             HHHHHHHHHHHHHHCEEEEEEECSC
T ss_pred             HHHHHHHHHHEECCCCCEEEECCCC
T ss_conf             3541013420203553189816765

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: LmbE-like
superfamily: LmbE-like
family: LmbE-like
domain: Hypothetical protein TT1542
species: Thermus thermophilus [TaxId: 274]