HHSEARCH alignment of GI: 254780369 and SCOP domain: d3clsc1

Alignment
>d3clsc1 c.26.2.3 (C:1-262) Small, beta subunit of electron transfer flavoprotein ETFP {Methylophilus methylotrophus [TaxId: 17]}
Probab=98.75  E-value=5.8e-07  Score=61.53  Aligned_cols=139  Identities=16%  Similarity=0.200  Sum_probs=104.0

Q ss_pred             ECHHHHHHHHHHHHH----CC--CEEEEEECCC-HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC--CC
Q ss_conf             878999999999873----89--3479998189-268889987078973999944810100012322455787403--45
Q gi|254780369|r   19 LSEQTARIVTAAQKI----SH--DIHVLVLGDN-IENIAQQAARIQGVTQVIVAQSTIFRHKLAGPVSDFVVSIAR--DY   89 (318)
Q Consensus        19 l~~~slEll~~A~~l----g~--~v~avv~G~~-~~~~a~~~~~~~Gad~V~~~~~~~~~~~~~~~~a~~l~~~~~--~~   89 (318)
                      +++...-+|-.|-+|    |+  +|+++.+|.. .+....+++.. |+|+.+.+.++.+....+-..+.+|+..++  +|
T Consensus        35 iNp~D~~AlE~Al~lke~~gg~~~Vtvvt~Gp~~a~~~Lr~alAm-GaD~avli~d~~~~~~d~~~tA~~lA~~i~~~~~  113 (262)
T d3clsc1          35 LNEWDDFSLEEAMKIKESSDTDVEVVVVSVGPDRVDESLRKCLAK-GADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAP  113 (262)
T ss_dssp             ECHHHHHHHHHHHHHHHHCSSCCEEEEEEESCTTHHHHHHHHHHT-TCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCC
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHC-CCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf             686259999999999854798359999961663678999999860-7973699960455661288899999998623488


Q ss_pred             CEEECCC---CCHHHHHHHHHHHHCCCCEECCCEEEC--C-CC--EEEEEEECCCEEEEEEECCCCEEEEECCCCCCCC
Q ss_conf             6044157---810344678888751774101320224--6-87--2797410695268999779842799516864333
Q gi|254780369|r   90 KTIMASA---NAMGKDILPRVAAMLDVMQVSEVIEII--S-PK--IFKRPSYTGNIIQTIETTDTYQIITIRAIAFPPA  160 (318)
Q Consensus        90 ~~Vl~~~---t~~GrdlaprlAarL~~~~vsdvv~i~--~-~~--~~~rp~fgG~~~a~v~~~~~~~viTvr~~sf~~~  160 (318)
                      ++||++.   ....--+.|.+|..|+.|+++.+++++  . +.  +.+|..-+| ...+++. ..|+++|+.++..+|-
T Consensus       114 DLIl~G~~s~D~~~gqvg~~lAe~Lg~P~vt~v~~i~~~~~~~~~~v~R~~e~g-~~e~v~~-~lPavitv~~~~n~PR  190 (262)
T d3clsc1         114 DMVFAGVQSSDQAYASTGISVASYLNWPHAAVVADLQYKPGDNKAVIRRELEGG-MLQEVEI-NCPAVLTIQLGINKPR  190 (262)
T ss_dssp             SEEEEESCCTTTCCCCHHHHHHHHHTCCEEEEEEEEECCTTCSEEEEEEEETTT-EEEEEEE-ESSCEEEECTTSSCCT
T ss_pred             CEEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEEECCC-EEEEEEE-CCCEEEEEECCCCCCC
T ss_conf             689996321477756377999987388647788787332799549999994799-1899996-6858999705767656


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: ETFP subunits
domain: Small, beta subunit of electron transfer flavoprotein ETFP
species: Methylophilus methylotrophus [TaxId: 17]