HHSEARCH alignment of GI: 254780369 and SCOP domain: d3clsd2

Alignment
>d3clsd2 c.31.1.2 (D:196-318) C-terminal domain of the electron transfer flavoprotein alpha subunit {Methylophilus methylotrophus [TaxId: 17]}
Probab=100.00  E-value=0  Score=395.32  Aligned_cols=122  Identities=40%  Similarity=0.667  Sum_probs=119.4

Q ss_pred             CCCHHHCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCHHHHHHCCCCEE-CCCEEEEEEECCHHHH
Q ss_conf             667000745641367777833568899999876398597425788678888889540159754-5738999961672645
Q gi|254780369|r  196 PTDLSSAKIVISGGKSFGSMENFHKLLLPLAKKLGAAIGATRDAVDAGFAPNDWQIGQTGVTV-SPELYIAAGISGAIQH  274 (318)
Q Consensus       196 ~v~L~~A~iVVsgGRGi~~~enf~~l~~~LA~~LgaavG~SRp~vD~gw~p~~~qIG~tG~~v-~P~lYia~GISGa~qH  274 (318)
                      .+||++|++|||+|||++++||| +++++||+.|||++|||||+||+||+|++|||||||++| +|+||||||||||+||
T Consensus         1 dvdL~~A~vVV~~GrG~~~~e~~-~~~~eLA~~lga~vg~SRp~vd~gw~~~~~qIG~sG~~v~~P~lYia~GISGa~QH   79 (123)
T d3clsd2           1 DIDITTVDFIMSIGRGIGEETNV-EQFRELADEAGATLCCSCPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQH   79 (123)
T ss_dssp             SCCTTSCSEEEEECGGGCSGGGH-HHHHHHHHHHTCEEEECHHHHHTTSSCGGGBBSSSSBCCTTCSEEEEESCCCCHHH
T ss_pred             CCCCCCCCEEEECCCCCCCHHHH-HHHHHHHHHHHCCEEECCHHHHCCCCCHHHEEECCCCCCCCCCEEEEECCCCHHHH
T ss_conf             98755299999878877987889-99999999860320553688876887744068467934169858999763226888


Q ss_pred             HHHHCCCCEEEEEECCCCCCHHHCCCEEEECCHHHHHHHHHHCC
Q ss_conf             55516898899976659988310276457523899999988609
Q gi|254780369|r  275 ISGMKDSKVIVSINTDENAPIFKISDYFIVGDIFKILPEIEKNL  318 (318)
Q Consensus       275 ~~G~~~s~~IvAIN~D~~ApIf~~ad~giv~D~~~vlp~l~~~l  318 (318)
                      ++||++|++|||||+||+||||++||||||||++||||+|+|+|
T Consensus        80 ~~Gm~~s~~IVAIN~D~~ApIf~~adygiVgD~~evlp~L~~~l  123 (123)
T d3clsd2          80 MAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL  123 (123)
T ss_dssp             HHHHTTCSEEEEECSCTTCGGGGTCSEEECSCHHHHHHHHHHHC
T ss_pred             HHHCCCCCEEEEECCCCCCCCHHHCCEEEEEEHHHHHHHHHHHC
T ss_conf             87616898899974899998412389888702999999999529


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: DHS-like NAD/FAD-binding domain
superfamily: DHS-like NAD/FAD-binding domain
family: C-terminal domain of the electron transfer flavoprotein alpha subunit
domain: C-terminal domain of the electron transfer flavoprotein alpha subunit
species: Methylophilus methylotrophus [TaxId: 17]