HHsearch alignment for GI: 254780370 and conserved domain: COG0114
>COG0114 FumC Fumarase [Energy production and conversion].
Probab=100.00 E-value=0 Score=379.01 Aligned_cols=408 Identities=20% Similarity=0.284 Sum_probs=335.5
Q ss_pred HHHHCCCCCCCCHHHHHHHHCCCHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEECCC
Q ss_conf 3332033238434699998425507-899999999999999999999879999899999999999999666459800156
Q gi|254780370|r 10 VNQMWGGRFSSSPSWIMEKINVSID-FDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDGSFVFSR 88 (473)
Q Consensus 10 ~~~lW~grf~~~~~~~~~~~~~s~~-~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~~~~~~~ 88 (473)
T Consensus 17 ad~~wg----AQTqRs~~nF~ig~~~mp~~~I~Al~~lKkaaA~~N~~LG~L~~~~a~aI~~Aadev~~Gk~d~~FPl~V 92 (462)
T COG0114 17 ADALWG----AQTQRSLENFPIGGEKMPREIIRALGLLKKAAAQVNADLGLLDPEKADAIIAAADEVLAGKHDDHFPLDV 92 (462)
T ss_pred HHHHHH----HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 788899----9999998637865332849999999999999999889827999899999999999997586667787688
Q ss_pred CC---C-----HHHHHHHHHHHHHHH-CCCC--CCC------CCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q ss_conf 64---6-----379999999973111-0234--201------44101123788799999999-99998677889999974
Q gi|254780370|r 89 DL---E-----DIHMNIEARLTSLIG-SIAG--KMH------TARSRNDQVALDLRLWIKEK-TLEITNDLKKLLTILLD 150 (473)
Q Consensus 89 ~~---e-----dvh~~iE~~l~~~~G-~~~~--~lH------~grSrND~~~t~~rl~lr~~-l~~l~~~l~~l~~~L~~ 150 (473)
T Consensus 93 wQTGSGTqsNMN~NEVIAnrA~e~~gg~~g~~~~VHPNDhVN~sQSSNDtfPTAmhIAa~~~v~~~LiPaL~~L~~~L~~ 172 (462)
T COG0114 93 WQTGSGTQSNMNVNEVIANRASELLGGELGSKKPVHPNDHVNMSQSSNDTFPTAMHIAAVLAVVNRLIPALKHLIKTLAA 172 (462)
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 75599863446289999999999837545778887998667765656762036999999999998757999999999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHH-------HHHH
Q ss_conf 477301452001665301133444567888888786206989998745423356532033566678998-------9631
Q gi|254780370|r 151 KAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRH-------FTAK 223 (473)
Q Consensus 151 ~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~-------~~a~ 223 (473)
T Consensus 173 Ka~~~~~iVKiGRTHLqDAtPlTlGQE~sGy~~ql~~~~~~i~~~l~~l~eLAiGGTAV-GTGlNa~p~f~ekva~~i~~ 251 (462)
T COG0114 173 KAEEFADVVKIGRTHLQDATPLTLGQEFSGYAAQLEHALERIEASLPHLYELAIGGTAV-GTGLNAHPEFGEKVAEELAE 251 (462)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCHHHHHHHHHHH
T ss_conf 99998645532731034457632443567899999999999999989999870577230-46768993478999999999
Q ss_pred HCCCC-CCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEECCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 03876-434785673027886424677768876648999999999841---24561540455456530044433601389
Q gi|254780370|r 224 ELGFR-EPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWST---PQFNFVRLSDAFSTGSSIMPQKRNPDGAE 299 (473)
Q Consensus 224 ~LGf~-~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss---~e~~~i~l~~~~~~GSSiMPqKrNP~~~E 299 (473)
T Consensus 252 ~TG~~F~~a~NkF~al~~hd~lv~~~Gal~~lA~~L~KIAnDiR~l~SGPr~GLgEi~lP-enePGSSIMPGKVNPtq~E 330 (462)
T COG0114 252 LTGLPFVTAPNKFEALAAHDALVEASGALRTLAVSLMKIANDIRWLGSGPRCGLGEIELP-ENEPGSSIMPGKVNPTQCE 330 (462)
T ss_pred HHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCCCCCCCHHHH
T ss_conf 758975048847887650068999867899999999999888878706887775421057-7899766789998942799
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHH----HHHHHHHHHHHHHHHHHH-HHCCCEECCCHHHHCCCCCCC
Q ss_conf 987668999752335876740484000010010055----798899999986567652-305866652101211237844
Q gi|254780370|r 300 LVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKE----PVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKSHS 374 (473)
Q Consensus 300 ~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDlq~~~~----~l~~ai~~~~~~L~l~~~-li~~l~vn~erm~~~~~~~~~ 374 (473)
T Consensus 331 A~tmv~~QV~Gnd~ai~~ags~---G-nFELNv~~Pvi~~N~LqS~~LLada~~~f~~~ci~gie~n~~~i~~~l~~Slm 406 (462)
T COG0114 331 ALTMVAAQVIGNDAAIAFAGSQ---G-NFELNVFKPVIAYNFLQSVRLLADAMRSFADHCIVGIEPNEERIKELLERSLM 406 (462)
T ss_pred HHHHHHHHHHCCHHHHHHHHCC---C-CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHH
T ss_conf 9999999997555888875405---7-42200102899999999999999999999987661351388999999861705
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHCCCHHHHHHCCHHHHH
Q ss_conf 3999999999853999799999999999999982989689899999940011326899965999999
Q gi|254780370|r 375 TATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSI 441 (473)
Q Consensus 375 ~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~~l~el~~~~~~~~~~~~~~di~~~ldp~~~v 441 (473)
T Consensus 407 LVTaLnp----~I------GYdkAa~IAK~A~keg~tlreaa~----~~G~lte~efd~~v~Pe~mv 459 (462)
T COG0114 407 LVTALNP----HI------GYDKAAKIAKKAHKEGTTLREAAL----ELGLLSEEEFDKLVDPEKMV 459 (462)
T ss_pred HHHHCCC----CC------CHHHHHHHHHHHHHCCCCHHHHHH----HCCCCCHHHHHHHCCHHHHC
T ss_conf 7886054----00------438999999999877982999998----83888999999863998826