HHsearch alignment for GI: 254780370 and conserved domain: TIGR00838
>TIGR00838 argH argininosuccinate lyase; InterPro: IPR009049 This entry represents argininosuccinate lyase, but may include examples of avian delta crystallins, in which argininosuccinate lyase activity may or may not be present and the biological role is to provide the optically clear cellular protein of the eye lens. ; GO: 0004056 argininosuccinate lyase activity, 0042450 arginine biosynthetic process via ornithine.
Probab=100.00 E-value=0 Score=1232.45 Aligned_cols=455 Identities=51% Similarity=0.836 Sum_probs=451.1
Q ss_pred HCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC-CEECCCCCC
Q ss_conf 2033238434699998425507899999999999999999999879999899999999999999666459-800156646
Q gi|254780370|r 13 MWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIEGLKVIRAEIVDG-SFVFSRDLE 91 (473)
Q Consensus 13 lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~gii~~~~~~~i~~al~~i~~~~~~~-~~~~~~~~e 91 (473)
T Consensus 1 LW~GRf~~~~~~~~~~f~~Sl~FD~~l~~~Di~~~~AH~~~L~k~GiLt~Ee~~~l~~gL~~l~~e~~~~P~~~~~~~~E 80 (469)
T TIGR00838 1 LWGGRFTGGTDPAVAKFNASLSFDKELAEADIEGSIAHTKMLKKAGILTEEEAAKLIEGLNELKEEVREGPKFNLDVDLE 80 (469)
T ss_pred CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
T ss_conf 96542245700799960487578999999721335999999875279888899999999999999886088878961710
Q ss_pred HHHHHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q ss_conf 379999999973111-0234201441011237887999999999999867788999997447730145200166530113
Q gi|254780370|r 92 DIHMNIEARLTSLIG-SIAGKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQ 170 (473)
Q Consensus 92 dvh~~iE~~l~~~~G-~~~~~lH~grSrND~~~t~~rl~lr~~l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~ 170 (473)
T Consensus 81 DiH~a~E~~Li~~~G~d~ggklHTGRSRNDQVATDlrl~lr~~v~~~~~~l~~~~~~L~e~Ae~~~~~~mPGYTHLQrAQ 160 (469)
T TIGR00838 81 DIHMAIERELIDRVGEDLGGKLHTGRSRNDQVATDLRLYLRDHVREIAEALLDLQKVLIELAEKHVETLMPGYTHLQRAQ 160 (469)
T ss_pred HHHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCC
T ss_conf 35679988887623701013124678764178998999999999999999999999999986128736614851013501
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHH
Q ss_conf 34445678888887862069899987454233565320335666789989631038764347856730278864246777
Q gi|254780370|r 171 PVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILECLSH 250 (473)
Q Consensus 171 P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT~~~idr~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~ 250 (473)
T Consensus 161 Pi~lAHhLLAY~~~l~RD~~RL~d~~kR~n~SPLGsGAlAGt~f~iDR~~~A~lLGF~~~~~NSlDaVSdRDFi~E~l~~ 240 (469)
T TIGR00838 161 PITLAHHLLAYAEMLERDYERLQDALKRVNVSPLGSGALAGTSFPIDREYTAELLGFDAVTENSLDAVSDRDFIIELLFV 240 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 05699999999989998899999999885048865503206898768888976318678875204665207899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCH
Q ss_conf 68876648999999999841245615404554565300444336013899876689997523358767404840000100
Q gi|254780370|r 251 SAICAMHMSRLAEEIILWSTPQFNFVRLSDAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDM 330 (473)
Q Consensus 251 l~~~~~~l~rla~Dl~~~ss~e~~~i~l~~~~~~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~p~~~~rDl 330 (473)
T Consensus 241 ~a~~m~hLSR~aEelIlw~s~EFgfieL~D~~stGSSiMPQKKNPD~aELiRGK~Grv~G~L~g~L~~lKalP~aYNrDl 320 (469)
T TIGR00838 241 AALIMVHLSRLAEELILWSSQEFGFIELPDEFSTGSSIMPQKKNPDVAELIRGKTGRVIGNLTGLLTILKALPLAYNRDL 320 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99997417689899999844687606745732005768888777207999987552689999999999711233235100
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 10055798899999986567652305866652101211237844399999999985399979999999999999998298
Q gi|254780370|r 331 QEDKEPVFDALETLQIIILAISAMIEDLTVNKDRLQEAATKSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQC 410 (473)
Q Consensus 331 q~~~~~l~~ai~~~~~~L~l~~~li~~l~vn~erm~~~~~~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~~g~ 410 (473)
T Consensus 321 QEdkE~LFD~v~t~~~~~~~~~~~l~~i~vn~er~~e~A~~~f~~ATdLADyLV~k~GVPFR~AH~ivG~~V~~~~e~G~ 400 (469)
T TIGR00838 321 QEDKEPLFDAVKTVELSLEVMTGMLDTIKVNKERMEEAASAGFSNATDLADYLVRKRGVPFREAHHIVGELVATAIERGK 400 (469)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 13783678899999999999999983081587899998644887078899999834799806778999999999997278
Q ss_pred --------CHHHCCHHHHHHHHHCCCHH-HHHHCCHHHHHHHCCCCCCCCH---HHHHHHHHHHHHHHH
Q ss_conf --------96898999999400113268-9996599999962148999998---999999999999999
Q gi|254780370|r 411 --------ELAKLPLAMLQQISPVITSA-VYDILKVESSISSRKSFGGTCA---AEVLKQVTYWRNRIQ 467 (473)
Q Consensus 411 --------~l~el~~~~~~~~~~~~~~d-i~~~ldp~~~v~~R~s~GGtap---~~V~~~i~~~r~~L~ 467 (473)
T Consensus 401 ~PGd~~~~~L~~lt~ee~~~~~~~~~ed~v~~~L~~~~~V~~R~~~GGtapGrv~~V~~~I~~aK~~l~ 469 (469)
T TIGR00838 401 SPGDVDASGLEELTLEELQKFSEEFEEDKVYEALDPEESVEKRDAYGGTAPGRVEEVEKAIEEAKARLA 469 (469)
T ss_pred CCCCCCCCHHHHCCHHHHHHHCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 999865101231367999974213573357774287999970257887881069999999999987509