HHsearch alignment for GI: 254780370 and conserved domain: TIGR00928

>TIGR00928 purB adenylosuccinate lyase; InterPro: IPR004769 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes. Adenylosuccinate lyase is involved in purine ribonucleotide biosynthesis.; GO: 0004018 adenylosuccinate lyase activity, 0009152 purine ribonucleotide biosynthetic process.
Probab=100.00  E-value=0  Score=541.71  Aligned_cols=410  Identities=26%  Similarity=0.343  Sum_probs=353.1

Q ss_pred             CCCCCC--CCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHH
Q ss_conf             964223--2023332033238434699998425507899999999999999999999879-------9998999999999
Q gi|254780370|r    1 MSKKIK--SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQG-------IISSEEAQKIIEG   71 (473)
Q Consensus         1 m~~~~~--~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~g-------ii~~~~~~~i~~a   71 (473)
T Consensus         1 ~~~RY~~~~~EM~~iWs--------------------e~~k~~~~l~VE~a~~~A~a~lGP~I~~v~~i~~~~~~~~~~k   60 (469)
T TIGR00928         1 LDERYGDKTPEMRAIWS--------------------EENKFKKWLDVEVALLRALAELGPVITEVPVIPAEAAKEIKEK   60 (469)
T ss_pred             CCCCCCCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCC
T ss_conf             98765666635452206--------------------5789999999999999997410873010466438899998579


Q ss_pred             ------------HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH------CCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             ------------99999666459800156646379999999973111------023420144101123788799999999
Q gi|254780370|r   72 ------------LKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIG------SIAGKMHTARSRNDQVALDLRLWIKEK  133 (473)
Q Consensus        72 ------------l~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G------~~~~~lH~grSrND~~~t~~rl~lr~~  133 (473)
T Consensus        61 ~~a~~~~~~~~rikeIE~~t----------~HDv-~A~~~~l~E~~~~~~eL~~~~~~iH~G~TS~Di~Dta~aLllr~s  129 (469)
T TIGR00928        61 IVASFDDVDLERIKEIEAVT----------KHDV-KAVVKALAEKCGEAVELGAEGEYIHFGATSNDIVDTALALLLRDS  129 (469)
T ss_pred             CEEEECHHHHHHHHHHHHHH----------CCHH-HHHHHHHHHHHHHHCCHHHCCEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf             52631456688687763232----------4529-989989977400000322235015314644448887899999998


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             -9999867788999997447730145200166530113344456788888878620698999874542335653203356
Q gi|254780370|r  134 -TLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGT  212 (473)
Q Consensus       134 -l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT  212 (473)
T Consensus       130 ~~~ii~~~l~~l~~~L~~~A~e~kd~~m~GRTHGq~A~PtT~G~~~A~w~~E~~R~~~rL~~~~~~~~vg~i-~Ga~-GT  207 (469)
T TIGR00928       130 RLEIILPKLKKLIDILKDKAEEHKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLKQAKERIKVGGI-SGAV-GT  207 (469)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCC-CH
T ss_conf             999879999999999999765309678841357824344869999999999999999999988861665742-2542-14


Q ss_pred             CCCC------CH-------HHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
Q ss_conf             6678------99-------8963103876434785673027886424677768876648999999999841245615404
Q gi|254780370|r  213 SFPI------DR-------HFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS  279 (473)
Q Consensus       213 ~~~i------dr-------~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~  279 (473)
T Consensus       208 ~a~~~~~~~G~~~~~~~~E~~V~~~LGL~-~~~~stGQi~~RD~~a~~~~~LA~lA~~l~k~A~~iR~lq~~e~~ev~--  284 (469)
T TIGR00928       208 YAAAGPLGDGDRDWLEEVEERVTELLGLK-PVPISTGQIIQRDRHAELLDALALLAATLEKFAVEIRLLQRTEVLEVE--  284 (469)
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHEE--
T ss_conf             76234457885799999999999870872-256747620000456899999988604866864788997603620111--


Q ss_pred             CCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHCCCHHHHHH---HHHHHHHHHHHHHHHH
Q ss_conf             5545----653004443360138998766899975233587674048-4000010010055---7988999999865676
Q gi|254780370|r  280 DAFS----TGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGL-PLAYSKDMQEDKE---PVFDALETLQIIILAI  351 (473)
Q Consensus       280 ~~~~----~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~-p~~~~rDlq~~~~---~l~~ai~~~~~~L~l~  351 (473)
T Consensus       285 E~F~P~gQ~GSSaMPHKrNPI~~E~~~GlaRv~r~~~~~~~---~~~p~lW~ERDlt~SsveR~~Lp~~~~~~d~~L~~~  361 (469)
T TIGR00928       285 EKFGPKGQVGSSAMPHKRNPIDSERVCGLARVIRSYVIPAL---ENVPVLWHERDLTDSSVERVILPDSFILADIILKTL  361 (469)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             02468888777788899988416556579999999999999---708985002531111367888658999999999998


Q ss_pred             HHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH------CCCCHHHCCHHHHHHH
Q ss_conf             5230586665210121123--7844399999999985399979999999999999998------2989689899999940
Q gi|254780370|r  352 SAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEK------NQCELAKLPLAMLQQI  423 (473)
Q Consensus       352 ~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~------~g~~l~el~~~~~~~~  423 (473)
T Consensus       362 ~~~~~~L~vypeni~rnL~~~~gl~~~~~vl~~lv-~~G~gRe~aye~v~~~A~~a~~v~~e~~~~~~l~~~~~~~-~~~  439 (469)
T TIGR00928       362 LKVVKKLVVYPENIKRNLELTLGLIASERVLIALV-ERGMGREEAYEIVRELAMKAAEVLKEEVEERDLLEFLLED-EEI  439 (469)
T ss_pred             HHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC-CCC
T ss_conf             75675034068899987300266002258999996-3158850168999999999999997316723689999727-456


Q ss_pred             HHCC-CHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             0113-2689996599999962148999998999999
Q gi|254780370|r  424 SPVI-TSAVYDILKVESSISSRKSFGGTCAAEVLKQ  458 (473)
Q Consensus       424 ~~~~-~~di~~~ldp~~~v~~R~s~GGtap~~V~~~  458 (473)
T Consensus       440 ~~~~~~~e~~~~~~P~~y~-------G~a~~~ve~v  468 (469)
T TIGR00928       440 TKYLTEEELAELLDPETYI-------GNAREIVERV  468 (469)
T ss_pred             CCCCCHHHHHHHCCHHHHH-------CCHHHHHHHC
T ss_conf             6125868999850936651-------4445554303