HHsearch alignment for GI: 254780370 and conserved domain: TIGR00928
>TIGR00928 purB adenylosuccinate lyase; InterPro: IPR004769 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes. Adenylosuccinate lyase is involved in purine ribonucleotide biosynthesis.; GO: 0004018 adenylosuccinate lyase activity, 0009152 purine ribonucleotide biosynthetic process.
Probab=100.00 E-value=0 Score=541.71 Aligned_cols=410 Identities=26% Similarity=0.343 Sum_probs=353.1
Q ss_pred CCCCCC--CCHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHH
Q ss_conf 964223--2023332033238434699998425507899999999999999999999879-------9998999999999
Q gi|254780370|r 1 MSKKIK--SNEVNQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQG-------IISSEEAQKIIEG 71 (473)
Q Consensus 1 m~~~~~--~~~~~~lW~grf~~~~~~~~~~~~~s~~~D~~l~~~di~~~~Ah~~~l~~~g-------ii~~~~~~~i~~a 71 (473)
T Consensus 1 ~~~RY~~~~~EM~~iWs--------------------e~~k~~~~l~VE~a~~~A~a~lGP~I~~v~~i~~~~~~~~~~k 60 (469)
T TIGR00928 1 LDERYGDKTPEMRAIWS--------------------EENKFKKWLDVEVALLRALAELGPVITEVPVIPAEAAKEIKEK 60 (469)
T ss_pred CCCCCCCCCHHHHHHCC--------------------HHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHCC
T ss_conf 98765666635452206--------------------5789999999999999997410873010466438899998579
Q ss_pred ------------HHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHH------CCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ------------99999666459800156646379999999973111------023420144101123788799999999
Q gi|254780370|r 72 ------------LKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIG------SIAGKMHTARSRNDQVALDLRLWIKEK 133 (473)
Q Consensus 72 ------------l~~i~~~~~~~~~~~~~~~edvh~~iE~~l~~~~G------~~~~~lH~grSrND~~~t~~rl~lr~~ 133 (473)
T Consensus 61 ~~a~~~~~~~~rikeIE~~t----------~HDv-~A~~~~l~E~~~~~~eL~~~~~~iH~G~TS~Di~Dta~aLllr~s 129 (469)
T TIGR00928 61 IVASFDDVDLERIKEIEAVT----------KHDV-KAVVKALAEKCGEAVELGAEGEYIHFGATSNDIVDTALALLLRDS 129 (469)
T ss_pred CEEEECHHHHHHHHHHHHHH----------CCHH-HHHHHHHHHHHHHHCCHHHCCEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 52631456688687763232----------4529-989989977400000322235015314644448887899999998
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf -9999867788999997447730145200166530113344456788888878620698999874542335653203356
Q gi|254780370|r 134 -TLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGT 212 (473)
Q Consensus 134 -l~~l~~~l~~l~~~L~~~A~~~~~t~mpg~TH~Q~A~P~T~g~~l~~~~~~l~rd~~rL~~~~~~~~~~pLG~~A~~GT 212 (473)
T Consensus 130 ~~~ii~~~l~~l~~~L~~~A~e~kd~~m~GRTHGq~A~PtT~G~~~A~w~~E~~R~~~rL~~~~~~~~vg~i-~Ga~-GT 207 (469)
T TIGR00928 130 RLEIILPKLKKLIDILKDKAEEHKDTVMLGRTHGQHAEPTTLGKKFALWADEMKRQLERLKQAKERIKVGGI-SGAV-GT 207 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCC-CH
T ss_conf 999879999999999999765309678841357824344869999999999999999999988861665742-2542-14
Q ss_pred CCCC------CH-------HHHHHHCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
Q ss_conf 6678------99-------8963103876434785673027886424677768876648999999999841245615404
Q gi|254780370|r 213 SFPI------DR-------HFTAKELGFREPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS 279 (473)
Q Consensus 213 ~~~i------dr-------~~~a~~LGf~~~~~ns~dav~sRd~~~e~~~~l~~~~~~l~rla~Dl~~~ss~e~~~i~l~ 279 (473)
T Consensus 208 ~a~~~~~~~G~~~~~~~~E~~V~~~LGL~-~~~~stGQi~~RD~~a~~~~~LA~lA~~l~k~A~~iR~lq~~e~~ev~-- 284 (469)
T TIGR00928 208 YAAAGPLGDGDRDWLEEVEERVTELLGLK-PVPISTGQIIQRDRHAELLDALALLAATLEKFAVEIRLLQRTEVLEVE-- 284 (469)
T ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHEE--
T ss_conf 76234457885799999999999870872-256747620000456899999988604866864788997603620111--
Q ss_pred CCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHCCCHHHHHH---HHHHHHHHHHHHHHHH
Q ss_conf 5545----653004443360138998766899975233587674048-4000010010055---7988999999865676
Q gi|254780370|r 280 DAFS----TGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGL-PLAYSKDMQEDKE---PVFDALETLQIIILAI 351 (473)
Q Consensus 280 ~~~~----~GSSiMPqKrNP~~~E~ir~~a~~~~g~~~~~~~~~~~~-p~~~~rDlq~~~~---~l~~ai~~~~~~L~l~ 351 (473)
T Consensus 285 E~F~P~gQ~GSSaMPHKrNPI~~E~~~GlaRv~r~~~~~~~---~~~p~lW~ERDlt~SsveR~~Lp~~~~~~d~~L~~~ 361 (469)
T TIGR00928 285 EKFGPKGQVGSSAMPHKRNPIDSERVCGLARVIRSYVIPAL---ENVPVLWHERDLTDSSVERVILPDSFILADIILKTL 361 (469)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 02468888777788899988416556579999999999999---708985002531111367888658999999999998
Q ss_pred HHHHCCCEECCCHHHHCCC--CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH------CCCCHHHCCHHHHHHH
Q ss_conf 5230586665210121123--7844399999999985399979999999999999998------2989689899999940
Q gi|254780370|r 352 SAMIEDLTVNKDRLQEAAT--KSHSTATDLADWLVSHAGLPFREAHYITGCTVSLAEK------NQCELAKLPLAMLQQI 423 (473)
Q Consensus 352 ~~li~~l~vn~erm~~~~~--~~~~~AT~lAd~Lv~~~GipFReAH~iVg~lV~~A~~------~g~~l~el~~~~~~~~ 423 (473)
T Consensus 362 ~~~~~~L~vypeni~rnL~~~~gl~~~~~vl~~lv-~~G~gRe~aye~v~~~A~~a~~v~~e~~~~~~l~~~~~~~-~~~ 439 (469)
T TIGR00928 362 LKVVKKLVVYPENIKRNLELTLGLIASERVLIALV-ERGMGREEAYEIVRELAMKAAEVLKEEVEERDLLEFLLED-EEI 439 (469)
T ss_pred HHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC-CCC
T ss_conf 75675034068899987300266002258999996-3158850168999999999999997316723689999727-456
Q ss_pred HHCC-CHHHHHHCCHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf 0113-2689996599999962148999998999999
Q gi|254780370|r 424 SPVI-TSAVYDILKVESSISSRKSFGGTCAAEVLKQ 458 (473)
Q Consensus 424 ~~~~-~~di~~~ldp~~~v~~R~s~GGtap~~V~~~ 458 (473)
T Consensus 440 ~~~~~~~e~~~~~~P~~y~-------G~a~~~ve~v 468 (469)
T TIGR00928 440 TKYLTEEELAELLDPETYI-------GNAREIVERV 468 (469)
T ss_pred CCCCCHHHHHHHCCHHHHH-------CCHHHHHHHC
T ss_conf 6125868999850936651-------4445554303