RPSBLAST alignment of GI: 254780370 and protein with PDBid: 1yis
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478
Score = 146 bits (370), Expect = 8e-36
Identities = 58/431 (13%), Positives = 130/431 (30%), Gaps = 31/431 (7%)
Query: 54 LAKQGI--ISSEEAQKIIEGLKVIRAEIVDGSFVFSRDLEDIH--MNIEARLTSLIGSIA 109
+ G+ ++ + ++ V + S + + H M L + A
Sbjct: 45 EKELGLKQVTQDAIDEMKSNRDVFDWPFIR-----SEERKLKHDVMAHNHAFGKLCPTAA 99
Query: 110 GKMHTARSRNDQVALDLRLWIKEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTA 169
G +H + + ++ I ++ L + ++ + G TH QTA
Sbjct: 100 GIIHLGATSCFVQDNADLIAYRDSIDHILKRFATVIDRLAAFSLKNKEVVTVGRTHYQTA 159
Query: 170 QPVTFGHHCMAYVEMFGRDISRFFDSIER----LDECPLGAAALAGTSFPIDRHFTAKEL 225
VT G + + + + ++ + G T F D
Sbjct: 160 SLVTVGKRGVLWAQELLMAFQSLSEFRDKMRFRGIKGATGTQDSFLTLFAGDESKVEALD 219
Query: 226 GF------REPTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWSTPQFNFVRLS 279
R + + ++ ++ +I +
Sbjct: 220 ELVTKKANFSNRFLITGQTYSRQQDSQLVFSLSLLGAAAKKVCTDIRVLQAFGELLEPFE 279
Query: 280 DAFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYSKDMQEDKEPVF- 338
GSS MP K+NP +E A + ++ A LTI+ L + D + +
Sbjct: 280 K-DQIGSSAMPYKKNPMKSERCCALSRKLINAPQEALTILADQGLERTLDDSAGRRMLIP 338
Query: 339 DALETLQIIILAISAMIEDLTVNKDRLQE--AATKSHSTATDLADWLVSHAGLPFREAHY 396
D L T + ++ + + E L+V D +++ + L G+ ++AH
Sbjct: 339 DVLLTAEALLTTLQNIFEGLSVQTDNVKKIVEDEIAFLGLEKAMMMLTEE-GVDRQQAHA 397
Query: 397 ITG-CTVSLAEKNQCELAKLPLAMLQQISPVITSAVYDILKVESSISSRKSFGGTCAAEV 455
+ + + + + M + V ++ + +F G C ++
Sbjct: 398 VIRKTALEAKQLQATQKVDIRQTMADPFFDSVRDRVVGLVN------NPINFTGRCVSQT 451
Query: 456 LKQVTYWRNRI 466
+
Sbjct: 452 ESFIAKELKPT 462