RPSBLAST alignment of GI: 254780370 and protein with PDBid: 3c8t

>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451

 Score =  168 bits (426), Expect = 2e-42
 Identities = 96/438 (21%), Positives = 167/438 (38%), Gaps = 20/438 (4%)

Query: 11  NQMWGGRFSSSPSWIMEKINVSIDFDKKLFEQDILGSKVHTTMLAKQGIISSEEAQKIIE 70
           + ++G  F+      M ++  +  F  +  E ++  ++      A+ GII  + A  I  
Sbjct: 5   SPLYGRSFADDK---MRELFSAQSFISRCVETEVALAR----AQARLGIIPEDAAAGITA 57

Query: 71  GLKVIRAEIVDGSFVFSRDLEDIHMNIEARLTSLIGSIAGKMHTARSRNDQVALDLRLWI 130
             +    E+             I   +E  L++  G     +H   +  D +     L I
Sbjct: 58  AARTFAPEMERLRDDTEIVGYPILPLVEQ-LSAHAGEAGKYLHWGATTQDIMDTATVLQI 116

Query: 131 KEKTLEITNDLKKLLTILLDKAEEHHNTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDIS 190
           ++    I+  ++ +   L   A  H +T M G THLQ A PVTFG+    ++  F R  +
Sbjct: 117 RDGLALISRRIESVRKALAALARNHRDTPMAGRTHLQHALPVTFGYKAAVWLSAFDRHAA 176

Query: 191 RFFDSIERLDECP----LGAAALAGTSFPIDRHFTAKELGFREPTRNSIDSVSDRDFILE 246
           R  +   R+         G  A  GT     +   A+EL    P+   I   S RD + E
Sbjct: 177 RLEEISPRVLVVEFSGASGTLASLGTRGLDVQRELARELNLGVPS---ITWHSARDAVAE 233

Query: 247 CLSHSAICAMHMSRLAEEIILWSTPQFNFVRL-SDAFSTGSSIMPQKRNPDGAELVRAKT 305
            +   A+ +  + +LA +I +  T +   V          SS MPQK+NP   EL+ A  
Sbjct: 234 TVQFLALVSGSLGKLAMDISIMMTTELGEVAEPFVRHRGASSTMPQKQNPVSCELILAGA 293

Query: 306 GRINGALLSLLTIMKGLPLAYSKDMQEDKEPVFDALETLQIIILAISAMIEDLTVNKDRL 365
             +     S+L  M       +     +   V +       I+     M+  L V  DR+
Sbjct: 294 RIVRNHATSMLDAMIHDFERATGPWHLEWSAVPEGFAVASGILYQAEFMLGGLQVFPDRM 353

Query: 366 QEAATKSHS--TATDLADWLVSHAGLPFREAHYITGCTVSLAEKNQCELAKLPLAMLQQI 423
           +E    S     A  +   L  H     +EAH I       A +++  L ++   M +  
Sbjct: 354 RENLDHSRGLIVAEAVMMALAPH--TGRKEAHDIVYLGCRRAVEDKTGLFEVLRTMPEVA 411

Query: 424 SPVITSAVYDILKVESSI 441
            P+   A+ D+    + +
Sbjct: 412 KPLGEEALRDLTDPRNYL 429