RPSBLAST alignment of GI: 254780370 and protein with PDBid: 3gtd

>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, cytoplasm, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Length = 482
 Score =  249 bits (638), Expect = 8e-67
 Identities = 67/385 (17%), Positives = 129/385 (33%), Gaps = 41/385 (10%)

Query: 55  AKQGIISSEEAQKIIEGLKVIRAEIVDGSFVF----SRDLEDIHMNIEARLTSLIGSIAG 110
            + G +  + A  I + +  I A   + +F      +      +MN+   + S+      
Sbjct: 81  YEFGDLEYKIATSIDKAIDRILAGEFEDNFPLVVWQTGSGTQTNMNMNEVIASIANEELT 140

Query: 111 -------------KMHTARSRNDQVALDLRLWIKEKTLE-ITNDLKKLLTILLDKAEEHH 156
                         ++  +S ND     + +     T + +   L  LLT L DK+++  
Sbjct: 141 GKKGGKFPVHPNDHVNKGQSSNDSFPTAMHIATVLATKQQLIPALNNLLTYLQDKSKDWD 200

Query: 157 NTIMPGFTHLQTAQPVTFGHHCMAYVEMFGRDISRFFDSIERLDECPLGAAALAGTSFPI 216
             I  G THLQ A P+T       Y+      + R  D+++++     G  A+       
Sbjct: 201 KIIKIGRTHLQDATPLTLKQEFSGYITQIEYALERIEDALKKVYLLAQGGTAVGTGINSK 260

Query: 217 DRHFTAKELGFRE-------PTRNSIDSVSDRDFILECLSHSAICAMHMSRLAEEIILWS 269
                       E          N  +S++  D ++E        A+ + ++A +I L  
Sbjct: 261 IGFDIKFAQKVAEFTQQPFKTAPNKFESLAAHDALVEFSGTLNTIAVSLMKIANDIRLLG 320

Query: 270 TPQFNFVRLSD--AFSTGSSIMPQKRNPDGAELVRAKTGRINGALLSLLTIMKGLPLAYS 327
           +     +          GSSIMP K NP   E +     ++ G  +++        L  +
Sbjct: 321 SGPRCGLGELHLPENEPGSSIMPGKVNPTQVEALTMVCTQVMGNHVTVTIAGSNGHLELN 380

Query: 328 KDMQEDKEPVFDALETLQIIILAISA-MIEDLTVNKDRLQEAATKS------------HS 374
                    +  ++E L   + +     ++ L  N  R+     KS            + 
Sbjct: 381 VFKPVIIYNILQSIELLSDSVNSFVTHCVKGLEPNIARINTLRDKSLMLVTVLNPHIGYD 440

Query: 375 TATDLADWLVSHAGLPFREAHYITG 399
            A  +A       G+  +EA     
Sbjct: 441 NAAKIAKEAH-KYGITLKEAAKKLN 464