HHsearch alignment for GI: 254780371 and conserved domain: COG0019
>COG0019 LysA Diaminopimelate decarboxylase [Amino acid transport and metabolism].
Probab=100.00 E-value=0 Score=715.18 Aligned_cols=389 Identities=42% Similarity=0.702 Sum_probs=366.7
Q ss_pred CCCEEECCEEEECCCCHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEE
Q ss_conf 87166688589878429999997499789977999999999999861447978999641079999999999739928986
Q gi|254780371|r 2 SAFKYFEGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIV 81 (431)
Q Consensus 2 ~~~~~~~~~l~i~~~~l~~La~~~gTP~yV~d~~~i~~n~~~l~~a~~~~~~~i~yAvKaN~~~~il~~l~~~G~g~dv~ 81 (431)
T Consensus 2 ~~~~~~~~~l~~~~~~~~~l~~~~gTP~yvyd~~~l~~~~~~~~~a~~~~~~~i~yAvKAn~~~~il~~l~~~g~g~Dv~ 81 (394)
T COG0019 2 TFFRNKDGELTIEGVDLPALAEEFGTPVYVYDEATLRRNARELKSAFPGSGAKVFYAVKANSNPAILRLLAEEGSGFDVA 81 (394)
T ss_pred CCCCCCCCCEEECCCCHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEC
T ss_conf 50001455302346457878503699889984799999999999861567815999974689879999999738886534
Q ss_pred CHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCC
Q ss_conf 89998652212578431244477542012444420687233332202467687741133442158998723778674433
Q gi|254780371|r 82 SEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKK 161 (431)
Q Consensus 82 S~~El~~al~~G~~~~~Ii~~g~~k~~~~l~~ai~~gv~~i~vDs~~el~~l~~~a~~~~~~~~I~lRinp~~~~~~~~~ 161 (431)
T Consensus 82 S~gEl~~al~aG~~~~~I~f~g~~ks~~ei~~a~e~gi~~i~vdS~~El~~l~~~a~~~--~~~v~lRInP~~~~~th~~ 159 (394)
T COG0019 82 SLGELELALAAGFPPERIVFSGPAKSEEEIAFALELGIKLINVDSEEELERLSAIAPGL--VARVSLRINPGVSAGTHEY 159 (394)
T ss_pred CHHHHHHHHHCCCCHHEEEECCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCC--CCEEEEEECCCCCCCCCCC
T ss_conf 89999999983999220999189999999999998699389979999999999864566--7449999889987775866
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH-CCCCCCCEEEECCCC
Q ss_conf 3223344456887111134577764156322002335564156442048999999998876531-026665268806873
Q gi|254780371|r 162 ISTGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLR-SNGHNIQHIDVGGGL 240 (431)
Q Consensus 162 ~~tg~~~sKFGi~~~~~~~~~~~~~~~~~l~l~GlH~H~GS~~~~~~~~~~~~~~~~~~~~~l~-~~g~~~~~ldiGGGf 240 (431)
T Consensus 160 ~~tg~~~sKFG~~~~~a~~~~~~~~~~~~l~~~Glh~HiGSq~~d~~~~~~a~~~~~~~~~~~~~~~g~~l~~inlGGG~ 239 (394)
T COG0019 160 IATGGKSSKFGISPEEALDVLERAAKLLGLELVGLHFHIGSQITDLDPFEEALAKVEELFGRLAEELGIQLEWLNLGGGL 239 (394)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 67786302369898898999999864678824899985178788808999999999999999887508874089966985
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCC--CCCEEEEEECCEECCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCHHHC
Q ss_conf 00026654553114565556542102--4530344101112036632588876403468974220055300011001110
Q gi|254780371|r 241 GIAYHSDHRPPSSSDYASLIHQYFGN--LQCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPTLYD 318 (431)
Q Consensus 241 ~i~y~~~~~~~~~~~~~~~i~~~~~~--~~~~l~~EPGR~lva~ag~ll~~V~~vK~~~~~~~~~vD~g~~~~~~p~~~~ 318 (431)
T Consensus 240 gi~Y~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~EPGR~iv~~aG~Lvt~V~~~k~~~~~~~v~vD~gm~~~~rpaly~ 319 (394)
T COG0019 240 GITYEDEYDPPDLAAYAKALKEAFGEYAEDVELILEPGRAIVANAGVLVTEVLDVKENGERNFVIVDGGMNDLMRPALYG 319 (394)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHCCEEEEEEEEEEEEECCCEEEEECCHHHCCCCHHHCC
T ss_conf 76878878840199999999999851567865998377577515436999999999707726999803442386777758
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCC-CCCEEEEECCCCHHHHHHCCCCCCCCCEEEEE
Q ss_conf 2465322223467776158999810005666656210056688-88899996797023334027788986659999
Q gi|254780371|r 319 AYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPR-PGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMV 393 (431)
Q Consensus 319 ~~~~i~~~~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~-~GD~l~i~~~GAY~~s~~s~fn~~p~p~~v~v 393 (431)
T Consensus 320 a~~~~~~-~~~~~~~~~~~~~v~G~~CesgD~~~~d~~lp~~~~~GD~l~i~~aGAY~~sm~s~yN~~~~~~ev~v 394 (394)
T COG0019 320 AYHHIRL-NRTDEDAEREEYDVVGPTCESGDVLARDRALPEPLKVGDLLVILDAGAYGASMSSNYNGRPRPAEVLV 394 (394)
T ss_pred CCCCCCC-CCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCEEEC
T ss_conf 7443312-45667887379999878768887771212378768989999990463267766043569899853559