HHsearch alignment for GI: 254780371 and conserved domain: PRK03646
>PRK03646 dadX alanine racemase; Reviewed.
Probab=99.63 E-value=3.2e-13 Score=109.91 Aligned_cols=298 Identities=15% Similarity=0.142 Sum_probs=181.3
Q ss_pred CE-EEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCC----CHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCCCCCEEE
Q ss_conf 78-9977999999999999861447978999641079----9999999997399-2898689998652212578431244
Q gi|254780371|r 28 PF-YCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANS----NQAVIKTLAHLGS-GLDIVSEGELRRALAAPVPAERIVF 101 (431)
Q Consensus 28 P~-yV~d~~~i~~n~~~l~~a~~~~~~~i~yAvKaN~----~~~il~~l~~~G~-g~dv~S~~El~~al~~G~~~~~Ii~ 101 (431)
T Consensus 3 p~~a~IdL~al~~N~~~lr~~~~--~~~i~aVVKAnAYGhG~~~va~~l--~g~~~faVa~~~Ea~~LR~~gi~~pIlvl 78 (355)
T PRK03646 3 PIQASLDLQALKQNLSIVREAAP--GARVWSVVKANAYGHGIERIWSAL--GATDGFAVLNLEEAITLRERGWKGPILML 78 (355)
T ss_pred CEEEEEEHHHHHHHHHHHHHHCC--CCEEEEEEEECCCCCCHHHHHHHH--HCCCEEEEEEHHHHHHHHHCCCCCCEEEE
T ss_conf 78999969999999999985589--986999995344648799999998--38997999469999999964999977975
Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 47754201244442068723333220246768774113344215899872377867443332233444568871111345
Q gi|254780371|r 102 SGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSL 181 (431)
Q Consensus 102 ~g~~k~~~~l~~ai~~gv~~i~vDs~~el~~l~~~a~~~~~~~~I~lRinp~~~~~~~~~~~tg~~~sKFGi~~~~~~~~ 181 (431)
T Consensus 79 ~g~-~~~~~~~~~~~~~l-~~~i~s~~~l~~l~~~--~~~~~~~vhlki------------DTGM--~RlG~~~~e~~~~ 140 (355)
T PRK03646 79 EGF-FHAQELELYDQHRL-TTCVHSNWQLKALQNA--RLKAPLDIYLKV------------NSGM--NRLGFQPERVQTV 140 (355)
T ss_pred CCC-CCHHHHHHHHHCCC-EEEECCHHHHHHHHHH--CCCCCCEEEEEE------------ECCC--CCCCCCHHHHHHH
T ss_conf 388-99899999998198-6875819999999863--517994699999------------0798--7789885789999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC-CCCCCCCCCHHHHHHHH
Q ss_conf 77764156322002335564156442048999999998876531026665268806873000-26654553114565556
Q gi|254780371|r 182 YAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA-YHSDHRPPSSSDYASLI 260 (431)
Q Consensus 182 ~~~~~~~~~l~l~GlH~H~GS~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ldiGGGf~i~-y~~~~~~~~~~~~~~~i 260 (431)
T Consensus 141 ~~~l~~~~~l~~~gi~SHfa~a-d~~~~~~~Q~~~F~~~~~~l---~~~~~lanSa~~l~~p~~~~d~vR~Gi~lYG~~- 215 (355)
T PRK03646 141 WQQLRAMGNVGEMTLMSHFARA-DHPDGISEAMARIEQAAEGL---ECERSLSNSAATLWHPQAHSDWVRPGIILYGAS- 215 (355)
T ss_pred HHHHHHCCCCCEEEEEEEECCC-CCCHHHHHHHHHHHHHHHCC---CCCEEEECCHHHHCCCCCCCCEEEEEEEEECCC-
T ss_conf 9999848998758999862457-88067999999999997267---866545287999789856797463237835688-
Q ss_pred HHHHCCCCCEEEEEECCE-ECCCCCEEEEEEEEECCCC-------CC--------CCEEECCCCCCCCCCHHHCCCCCCC
Q ss_conf 542102453034410111-2036632588876403468-------97--------4220055300011001110246532
Q gi|254780371|r 261 HQYFGNLQCKIILEPGRF-LVADVGILVTKVISIKKSA-------DK--------TFVILDVAMNDFMRPTLYDAYHEIN 324 (431)
Q Consensus 261 ~~~~~~~~~~l~~EPGR~-lva~ag~ll~~V~~vK~~~-------~~--------~~~~vD~g~~~~~~p~~~~~~~~i~ 324 (431)
T Consensus 216 --------p~~~~~~~~~~~LkPvmsl~a~i~~vk~l~~G~~VgYg~t~~a~~~~~ia~vpiGYaDG~---------~R- 277 (355)
T PRK03646 216 --------PSGQWRDIANTGLRPVMTLSSEIIGVQTLPAGERVGYGGRYTARREQRIGIVAAGYADGY---------PR- 277 (355)
T ss_pred --------CCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC---------CC-
T ss_conf --------664444442347722089999999999816899546787524247569999840413563---------43-
Q ss_pred CCCCCCC-CCCEEEEEEEEEECCCCCEEEEEE-ECCCCCCCCEEEEECCC
Q ss_conf 2223467-776158999810005666656210-05668888899996797
Q gi|254780371|r 325 YIVNPAG-DRLHIHADIVGPICETGDFIALNR-KIALPRPGDLLYIEKTG 372 (431)
Q Consensus 325 ~~~~~~~-~~~~~~~~i~G~~C~~~D~l~~~~-~lp~l~~GD~l~i~~~G 372 (431)
T Consensus 278 ~~sn~~~V~i~G~~~pivGrI~M--D~~~vDvt~~~~~~~Gd~V~l~G~~ 325 (355)
T PRK03646 278 HAPTGTPVLVDGVRTRTVGTVSM--DMLAVDLTPCPQAGIGTPVELWGKE 325 (355)
T ss_pred CCCCCCEEEECCEEEEEECEECC--CEEEEECCCCCCCCCCCEEEEECCC
T ss_conf 35799789999999547677645--5689988899878999999998999