HHsearch alignment for GI: 254780371 and conserved domain: PRK05354
>PRK05354 arginine decarboxylase; Provisional.
Probab=100.00 E-value=1.5e-44 Score=322.80 Aligned_cols=420 Identities=22% Similarity=0.288 Sum_probs=323.7
Q ss_pred CCEEEC-CEEEEC-------CCCHHHHHHH-----CCCCEEEEEHHHHHHHHHHHHHHCCC--------CCCEEEEEEEC
Q ss_conf 716668-858987-------8429999997-----49978997799999999999986144--------79789996410
Q gi|254780371|r 3 AFKYFE-GSLHAE-------NVSLEKLAHV-----VQTPFYCYSTTAIEKNYLTFSNAFDG--------MDTMVCYALKA 61 (431)
Q Consensus 3 ~~~~~~-~~l~i~-------~~~l~~La~~-----~gTP~yV~d~~~i~~n~~~l~~a~~~--------~~~~i~yAvKa 61 (431)
T Consensus 27 yF~In~~G~v~V~P~~~~~~~idL~~lv~~l~~~G~~~P~llRF~dIL~~ri~~l~~aF~~Ai~e~~Y~g~y~gVyPIKV 106 (634)
T PRK05354 27 YFSINDAGHVSVSPDGDRPGAIDLAELVKELRARGLRLPLLLRFPDILQDRVRSLNAAFKKAIEEYGYQGDYQGVYPIKV 106 (634)
T ss_pred CEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEE
T ss_conf 53077983589931898888747999999999769999779964699999999999999999998298886630422343
Q ss_pred CCCHHHHHHHHHCC----CCEEEECHHHHHHHHHCCCCCCC-EEECCCCCCCHHHHHHH---HCCCC-CCCCCCCHHHHH
Q ss_conf 79999999999739----92898689998652212578431-24447754201244442---06872-333322024676
Q gi|254780371|r 62 NSNQAVIKTLAHLG----SGLDIVSEGELRRALAAPVPAER-IVFSGVGKTIDEIDLAL---QSGIY-CFNVESESELKT 132 (431)
Q Consensus 62 N~~~~il~~l~~~G----~g~dv~S~~El~~al~~G~~~~~-Ii~~g~~k~~~~l~~ai---~~gv~-~i~vDs~~el~~ 132 (431)
T Consensus 107 NQ~r~VVeeI~~~G~~~~~GLEAGSKpEL~a~la~~~~~~aliiCNG-yKD~eyI~LAl~a~klG~~v~iViEk~~EL~~ 185 (634)
T PRK05354 107 NQQRHVVEEIVASGKPYNLGLEAGSKPELMAVLALANDPGSLIVCNG-YKDREYIRLALIGRKLGHKVFIVIEKLSELEL 185 (634)
T ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECC-CCCHHHHHHHHHHHHCCCCEEEEECCHHHHHH
T ss_conf 65289999999727656555535868999999862379995599568-27699999999999769966999746899999
Q ss_pred HHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC-HHHHHHHHHHCCCCCHHHH
Q ss_conf 877411334421589987237786744333223344456887111134577764156322-0023355641564420489
Q gi|254780371|r 133 LNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYASTLPGVK-ISGVDMHIGSQIDQIESFH 211 (431)
Q Consensus 133 l~~~a~~~~~~~~I~lRinp~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~~~~~~~~~l~-l~GlH~H~GS~~~~~~~~~ 211 (431)
T Consensus 186 il~~a~~l~v~P~iGvR~kL~s~gsGk-W~~SgGd~sKFGLs~~eil~~v~~Lk~~~~ld~L~LLHfHiGSQI~~I~~ik 264 (634)
T PRK05354 186 ILEEAKELGVKPRLGVRARLASQGSGK-WQSSGGEKSKFGLSATEILEAVERLREAGLLDCLQLLHFHLGSQIANIRDIK 264 (634)
T ss_pred HHHHHHHCCCCCCEEEEEEECCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCHHHHH
T ss_conf 999999749998505799862565761-0677874121588899999999998865845324331132455553499999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC------CCCHHHHHHHHHHHH-------CCCCCEEEEEECCE
Q ss_conf 99999998876531026665268806873000266545------531145655565421-------02453034410111
Q gi|254780371|r 212 KAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYHSDHR------PPSSSDYASLIHQYF-------GNLQCKIILEPGRF 278 (431)
Q Consensus 212 ~~~~~~~~~~~~l~~~g~~~~~ldiGGGf~i~y~~~~~------~~~~~~~~~~i~~~~-------~~~~~~l~~EPGR~ 278 (431)
T Consensus 265 ~av~Ea~r~Y~eL~~~Ga~i~ylDvGGGLgVDYdGs~s~~~~S~NYsl~EYa~dVV~~v~~~c~~~~vphP~IvtESGRA 344 (634)
T PRK05354 265 TAVREAARIYVELRKLGAPIKYLDVGGGLGVDYDGTRSQSDSSVNYSLQEYANDVVYTLKEICEEKGVPHPTIISESGRA 344 (634)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHH
T ss_conf 99999999999999758985178515862667677665886676769999899999999999997599999178535610
Q ss_pred ECCCCCEEEEEEEEECCCCCCCC--E----------------EEC-----------------------------------
Q ss_conf 20366325888764034689742--2----------------005-----------------------------------
Q gi|254780371|r 279 LVADVGILVTKVISIKKSADKTF--V----------------ILD----------------------------------- 305 (431)
Q Consensus 279 lva~ag~ll~~V~~vK~~~~~~~--~----------------~vD----------------------------------- 305 (431)
T Consensus 345 i~AhhsvLv~~Vl~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~E~y~Da~~~~~e~~~~F~~G~lsL~~RA~a 424 (634)
T PRK05354 345 ITAHHAVLVFNVLGVERVEYEEPPAPAEDAPPLLQNLWETLQEIDRRNLQEIYHDAQQDLEEALSLFALGYLSLQERAWA 424 (634)
T ss_pred EEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 10244589986113456887788989877679999999999853778899999999999999999984788579999999
Q ss_pred ---------------------------------------CCC-CCCCCCHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEC
Q ss_conf ---------------------------------------530-0011001110246532222346777615899981000
Q gi|254780371|r 306 ---------------------------------------VAM-NDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPIC 345 (431)
Q Consensus 306 ---------------------------------------~g~-~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~i~G~~C 345 (431)
T Consensus 425 E~l~~~i~~~i~~~~~~~~~~~~el~~L~~~Lad~Y~~NFSvFQSlPD~WaIdQlFPImPih-RL~E~Ptr~a~l~DiTC 503 (634)
T PRK05354 425 EQLYWAICREIQKLLDPKNAHRPELDELQERLADKYYVNFSLFQSLPDAWAIDQLFPVMPLH-RLDEEPTRRAVLADITC 503 (634)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEEEHHHHCCCCHHHHCCCCCCCCCC-CCCCCCCCCEEEEEECC
T ss_conf 99999999999997523678968999999987655587325751473077752666422330-25888775448862054
Q ss_pred CCCCEEEE---------EEECCCCCCCC--EEEEECCCCHHHHHHCCCCCCCCCEEEEEE---CCEE--EEEEECCCHHH
Q ss_conf 56666562---------10056688888--999967970233340277889866599998---8968--99982489889
Q gi|254780371|r 346 ETGDFIAL---------NRKIALPRPGD--LLYIEKTGAYGAVQSGTYNSRLLIPEIMVN---GSQF--HIIRPRMTFQE 409 (431)
Q Consensus 346 ~~~D~l~~---------~~~lp~l~~GD--~l~i~~~GAY~~s~~s~fn~~p~p~~v~v~---~g~~--~~ir~ret~ed 409 (431)
T Consensus 504 DSDGkI~~fi~~~~v~~tLpLH~~~~~e~YylG~FLvGAYQEiLGdlHNLFGdt~~v~V~~~~~g~~~i~~~i~Gdtv~d 583 (634)
T PRK05354 504 DSDGKIDQFIDGQGIKTTLPLHPLDPGEPYYLGFFLVGAYQEILGDMHNLFGDTNAVHVRVDEDGGYEIEHVIEGDTVAD 583 (634)
T ss_pred CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCHHH
T ss_conf 78886533007888746756999999997679876300768876001430799877999986999889987506885999
Q ss_pred HHH-CCCCCHHHHHCCC
Q ss_conf 973-0888568862343
Q gi|254780371|r 410 LIE-LDSIPAWLQKTPK 425 (431)
Q Consensus 410 ~~~-~~~~p~~~~~~~~ 425 (431)
T Consensus 584 VL~yv~yd~~~l~~~~r 600 (634)
T PRK05354 584 VLEYVQYDPEELLERLR 600 (634)
T ss_pred HHHHCCCCHHHHHHHHH
T ss_conf 99873879999999999