HHsearch alignment for GI: 254780371 and conserved domain: TIGR01108
>TIGR01108 oadA oxaloacetate decarboxylase alpha subunit; InterPro: IPR005776 This family describes the bacterial oxaloacetate decarboxylase alpha subunit and its equivalents in archaea . The oxaloacetate decarboxylase Na+ pump is the paradigm of the family of Na+ transport decarboxylases that present in bacteria and archaea. It a multi subunit enzyme consisting of a peripheral alpha-subunit and integral membrane subunits beta and gamma. The energy released by the decarboxylation reaction of oxaloacetate is coupled to Na+ ion pumping across the membrane.; GO: 0008948 oxaloacetate decarboxylase activity, 0006814 sodium ion transport.
Probab=90.44 E-value=0.7 Score=26.04 Aligned_cols=218 Identities=15% Similarity=0.201 Sum_probs=120.4
Q ss_pred EECCCCHHHHHHHHHCCC-C--------EEEE------CHHHHHHHHHCCCCCCCE--EECCCCC----------CCHHH
Q ss_conf 410799999999997399-2--------8986------899986522125784312--4447754----------20124
Q gi|254780371|r 59 LKANSNQAVIKTLAHLGS-G--------LDIV------SEGELRRALAAPVPAERI--VFSGVGK----------TIDEI 111 (431)
Q Consensus 59 vKaN~~~~il~~l~~~G~-g--------~dv~------S~~El~~al~~G~~~~~I--i~~g~~k----------~~~~l 111 (431)
T Consensus 18 mRteDMLPi~~~LD~vGfwSLEvWGGATFDaC~RFL~EDPW~RLR~lk~~~pnT~L~MLLRGQNLlGYRHYADDVVe~FV 97 (616)
T TIGR01108 18 MRTEDMLPILEKLDDVGFWSLEVWGGATFDACIRFLNEDPWERLRELKKALPNTKLQMLLRGQNLLGYRHYADDVVEAFV 97 (616)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHH
T ss_conf 57313689998750249556520244105578442488855899999973578751234204542344158436899999
Q ss_pred HHHHHCCCCCC-CCCCCHHHHHHHH---HHCCCCC-CEEEEEEEECCCCCCCCC-CCCCCCCCCCC-----------CC-
Q ss_conf 44420687233-3322024676877---4113344-215899872377867443-33223344456-----------88-
Q gi|254780371|r 112 DLALQSGIYCF-NVESESELKTLNQ---RAVSLGK-KAPIAFRVNPDINANTHK-KISTGKKEDKF-----------GI- 173 (431)
Q Consensus 112 ~~ai~~gv~~i-~vDs~~el~~l~~---~a~~~~~-~~~I~lRinp~~~~~~~~-~~~tg~~~sKF-----------Gi- 173 (431)
T Consensus 98 ~~a~~NG~DVFRiFDALND~RNl~~ai~a~Kk~g~dHvQg~iSYTtS-PvHTl~~yl~la~~L~~~G~DSI~IKDMaGlL 176 (616)
T TIGR01108 98 KKAVENGLDVFRIFDALNDPRNLQKAIEAAKKHGADHVQGAISYTTS-PVHTLEKYLELAKELLEMGVDSICIKDMAGLL 176 (616)
T ss_pred HHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC-CHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 99997598089951245887789999999997389789999712468-43678889999999998188605520200464
Q ss_pred CCCCCHHHHHHHHHCCC-CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC----C----
Q ss_conf 71111345777641563-22002335564156442048999999998876531026665268806873000----2----
Q gi|254780371|r 174 PIHQIHSLYAYASTLPG-VKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIA----Y---- 244 (431)
Q Consensus 174 ~~~~~~~~~~~~~~~~~-l~l~GlH~H~GS~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ldiGGGf~i~----y---- 244 (431)
T Consensus 177 TP~~AYELV~alK~~~~n~pv-hLH~H~TtG-mA~~AllkA~EAG~d~iDTA------isS~S~gtSHPptE~lv~~L~~ 248 (616)
T TIGR01108 177 TPKVAYELVSALKKEFGNLPV-HLHSHATTG-MAEMALLKAIEAGADMIDTA------ISSMSGGTSHPPTETLVAALRG 248 (616)
T ss_pred CHHHHHHHHHHHHHHCCCEEE-EEECCCCHH-HHHHHHHHHHHCCCCCCHHC------CCCCCCCCCCCHHHHHHHHHHC
T ss_conf 415899999999742397468-863247233-79999998887078800200------5523478888747999999705
Q ss_pred CCCCCCCC------HHHHHHHHHHHHCCC-CCEEEEEECCEECCCCCEEEEEEEE
Q ss_conf 66545531------145655565421024-5303441011120366325888764
Q gi|254780371|r 245 HSDHRPPS------SSDYASLIHQYFGNL-QCKIILEPGRFLVADVGILVTKVIS 292 (431)
Q Consensus 245 ~~~~~~~~------~~~~~~~i~~~~~~~-~~~l~~EPGR~lva~ag~ll~~V~~ 292 (431)
T Consensus 249 ~gyD~gld~~~L~~i~~YFr~VRkKY~~fle~~~-------~~~D~RiLv~QvPG 296 (616)
T TIGR01108 249 TGYDTGLDIELLLEIADYFRKVRKKYSQFLESQL-------KGPDSRILVSQVPG 296 (616)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-------CCCCCEEEEEECCC
T ss_conf 7874310279999999999999999988607677-------78884489973688