HHsearch alignment for GI: 254780371 and conserved domain: TIGR03099
>TIGR03099 dCO2ase_PEP1 pyridoxal-dependent decarboxylase, exosortase system type 1 associated. The sequences in this family contain the pyridoxal binding domain (pfam02784) and C-terminal sheet domain (pfam00278) of a family of Pyridoxal-dependent decarboxylases. Characterized enzymes in this family decarboxylate substrates such as ornithine, diaminopimelate and arginine. The genes of the family modeled here, with the exception of those observed in certain Burkholderia species, are all found in the context of exopolysaccharide biosynthesis loci containing the exosortase/PEP-CTERM protein sorting system. More specifically, these are characteristic of the type 1 exosortase system represented by the Genome Property GenProp0652. The substrate of these enzymes may be a precursor of the carrier or linker which is hypothesized to release the PEP-CTERM protein from the exosortase enzyme. These enzymes are apparently most closely related to the diaminopimelate decarboxylase modeled by TIGR01048
Probab=100.00 E-value=0 Score=738.69 Aligned_cols=385 Identities=31% Similarity=0.479 Sum_probs=357.1
Q ss_pred CEEECCEEEECCCCHHHHHHHCC-CCEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEC
Q ss_conf 16668858987842999999749-97899779999999999998614479789996410799999999997399289868
Q gi|254780371|r 4 FKYFEGSLHAENVSLEKLAHVVQ-TPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAVIKTLAHLGSGLDIVS 82 (431)
Q Consensus 4 ~~~~~~~l~i~~~~l~~La~~~g-TP~yV~d~~~i~~n~~~l~~a~~~~~~~i~yAvKaN~~~~il~~l~~~G~g~dv~S 82 (431)
T Consensus 1 ~~~~~g~l~i~g~~~~~la~~~g~TPlyVyd~~~l~~~~~~l~~a~p~-~~~i~YAvKaN~~~~il~~l~~~G~g~DvaS 79 (398)
T TIGR03099 1 FTIKNGCLCVGGIPLTELAARAGGTPFYAYDRGLVSERVAALRKALPE-ELAIHYAVKANPMPALLAHMAPLVDGFDVAS 79 (398)
T ss_pred CEEECCEEEECCEEHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCC-CCEEEEEEECCCCHHHHHHHHHCCCCEEEEC
T ss_conf 917999999999669999998789998996699999999999985799-9849999602899999999998199299969
Q ss_pred HHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCC
Q ss_conf 99986522125784312444775420124444206872333322024676877411334421589987237786744333
Q gi|254780371|r 83 EGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKI 162 (431)
Q Consensus 83 ~~El~~al~~G~~~~~Ii~~g~~k~~~~l~~ai~~gv~~i~vDs~~el~~l~~~a~~~~~~~~I~lRinp~~~~~~~~~~ 162 (431)
T Consensus 80 ~gEl~~al~~G~~~~~Ii~~gp~K~~~~l~~A~~~gv-~i~vDS~~El~~i~~~a~~~~~~~~i~lRinp~~~~~~~~-~ 157 (398)
T TIGR03099 80 AGELAVALDTGYDPGCISFAGPGKTDAELRRALAAGV-LINVESLRELNRLAALSEALGLRARVAVRVNPDFELKGSG-M 157 (398)
T ss_pred HHHHHHHHHCCCCCHHEEECCCCCCHHHHHHHHHCEE-EEEECCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCC-E
T ss_conf 9999999984999100177899879799998875605-9964446889999998876599606998616887668786-0
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH-HCCCCCCCEEEECCCCC
Q ss_conf 22334445688711113457776415632200233556415644204899999999887653-10266652688068730
Q gi|254780371|r 163 STGKKEDKFGIPIHQIHSLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQL-RSNGHNIQHIDVGGGLG 241 (431)
Q Consensus 163 ~tg~~~sKFGi~~~~~~~~~~~~~~~~~l~l~GlH~H~GS~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~ldiGGGf~ 241 (431)
T Consensus 158 ~~~~~~sKFGi~~~~~~~~l~~~~~~-~l~~~Glh~HiGS~~~~~~~~~~a~~~~~~~~~~l~~~~g~~l~~idiGGGf~ 236 (398)
T TIGR03099 158 KMGGGAKQFGIDAEQVPAALAFIKAA-DLDFQGFHIFAGSQNLNAEAIIEAQAKTLALALRLAESAPAPVRVINIGGGFG 236 (398)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHC-CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC
T ss_conf 12888554678999999999999866-99299989926989889699999999999999999997599752776257657
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCC-----CCEEEEEECCEECCCCCEEEEEEEEECCCCCCCCEEECCCCCCCCCCH-
Q ss_conf 00266545531145655565421024-----530344101112036632588876403468974220055300011001-
Q gi|254780371|r 242 IAYHSDHRPPSSSDYASLIHQYFGNL-----QCKIILEPGRFLVADVGILVTKVISIKKSADKTFVILDVAMNDFMRPT- 315 (431)
Q Consensus 242 i~y~~~~~~~~~~~~~~~i~~~~~~~-----~~~l~~EPGR~lva~ag~ll~~V~~vK~~~~~~~~~vD~g~~~~~~p~- 315 (431)
T Consensus 237 v~y~~~~~~~d~~~~~~~i~~~~~~~~~~~~~~~l~~EPGR~lva~ag~llt~V~~~K~~~~~~~~~~D~G~~~~l~~~~ 316 (398)
T TIGR03099 237 IPYFPGNPPLDLAPVGAALAALFARLRDALPEVEILLELGRYLVGEAGIYVCRVIDRKISRGETFLVTDGGLHHHLSASG 316 (398)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCCCC
T ss_conf 67789998869999999999999987612798779990670320067189999999984398179994784302533343
Q ss_pred ----HHCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEECCCCHHHHHH-CCCCCCCCCEE
Q ss_conf ----1102465322223467776158999810005666656210056688888999967970233340-27788986659
Q gi|254780371|r 316 ----LYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIALPRPGDLLYIEKTGAYGAVQS-GTYNSRLLIPE 390 (431)
Q Consensus 316 ----~~~~~~~i~~~~~~~~~~~~~~~~i~G~~C~~~D~l~~~~~lp~l~~GD~l~i~~~GAY~~s~~-s~fn~~p~p~~ 390 (431)
T Consensus 317 ~~~~~~~~~~p~~~~~-~~~~~~~~~~~v~Gp~C~s~D~l~~~~~LP~l~~GD~L~i~~~GAY~~s~s~~~fn~~p~paE 395 (398)
T TIGR03099 317 NFGQVIRRNYPVVIGN-RIGGAVREIASIVGPLCTPLDLLAEKGTLPVAEPGDLVVIFQSGAYGASASPLAFLGHPEAVE 395 (398)
T ss_pred CHHHHHCCCCEEEECC-CCCCCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 1034310255056146-788987558999912888446888377168899999999948454068762404039999868
Q ss_pred EEE
Q ss_conf 999
Q gi|254780371|r 391 IMV 393 (431)
Q Consensus 391 v~v 393 (431)
T Consensus 396 vlv 398 (398)
T TIGR03099 396 LLV 398 (398)
T ss_pred EEC
T ss_conf 869