PSIBLAST alignment of GI: 254780371 and protein with PDB id: 1knw
>gi|39654106|pdb|1KNW|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase Length = 425
>gi|39654107|pdb|1KO0|A Chain A, Crystal Structure Of A D,L-Lysine Complex Of Diaminopimelate Decarboxylase Length = 425
Score = 222 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 111/416 (26%), Positives = 172/416 (41%), Gaps = 29/416 (6%)
Query: 8 EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYALKANSNQAV 67
+ L AEN L +L P + Y I + FD +V +A KA SN +
Sbjct: 9 DTDLTAEN--LLRLPAEFGCPVWVYDAQIIRRQIAALKQ-FD----VVRFAQKACSNIHI 61
Query: 68 IKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGIYCFNVESE 127
++ + G +D VS GE+ RALAA + + T D ID A + +
Sbjct: 62 LRLMREQGVKVDSVSLGEIERALAAGYNPQTH-PDDIVFTADVIDQATLERVSELQIPVN 120
Query: 128 SELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIHSLYAYAST 187
+ + + + + RVNP +K +TG + K GI + +
Sbjct: 121 AGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR 180
Query: 188 LPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGGLGIAYH-- 245
+ I I + ++ + +Q+ G ++Q I GGGL + Y
Sbjct: 181 HHLQLV-----GIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQDLQAISAGGGLSVPYQQG 235
Query: 246 ----SDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADKTF 301
+ A K+ +EPGRFLVA G+L+T+V S+K+ + F
Sbjct: 236 EEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQSGVLITQVRSVKQMGSRHF 295
Query: 302 VILDVAMNDFMRPTLYDAYHEI---NYIVNPAGDRLHIHADIVGPICETGDFIALN---- 354
V++D ND MRP +Y +YH I + + GP+CE+GD
Sbjct: 296 VLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGN 355
Query: 355 ---RKIALPRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTF 407
R + + GD L + TGAYGA S YNSR L+PE++ + Q +IR R T
Sbjct: 356 VETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTI 411