PSIBLAST alignment of GI: 254780371 and protein with PDB id: 3n2b
>gi|297787806|pdb|3N2B|A Chain A, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae. Length = 441
>gi|297787807|pdb|3N2B|B Chain B, 1.8 Angstrom Resolution Crystal Structure Of Diaminopimelate Decarboxylase (Lysa) From Vibrio Cholerae. Length = 441
Score = 309 bits (791), Expect = 5e-82, Method: Composition-based stats.
Identities = 180/420 (42%), Positives = 255/420 (60%), Gaps = 5/420 (1%)
Query: 1 MSAFKYF-EGSLHAENVSLEKLAHVVQTPFYCYSTTAIEKNYLTFSNAFDGMDTMVCYAL 59
M F Y +G L AE V L LA+ TP Y YS +E+++ F + ++CYA+
Sbjct: 25 MDYFNYQEDGQLWAEQVPLADLANQYGTPLYVYSRATLERHWHAFDKSVGDYPHLICYAV 84
Query: 60 KANSNQAVIKTLAHLGSGLDIVSEGELRRALAAPVPAERIVFSGVGKTIDEIDLALQSGI 119
KANSN V+ TLA LGSG DIVS GEL R LAA ++VFSGVGKT E+ ALQ I
Sbjct: 85 KANSNLGVLNTLARLGSGFDIVSVGELERVLAAGGDPSKVVFSGVGKTEAEMKRALQLKI 144
Query: 120 YCFNVESESELKTLNQRAVSLGKKAPIAFRVNPDINANTHKKISTGKKEDKFGIPIHQIH 179
CFNVESE EL+ LN+ A LG KAPI+ R+NPD++A TH ISTG +++KFGI +
Sbjct: 145 KCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAA 204
Query: 180 SLYAYASTLPGVKISGVDMHIGSQIDQIESFHKAFKLLRDLTQQLRSNGHNIQHIDVGGG 239
+Y A +LP + + G+D HIGSQ+ + F A L L L++ G +I+H+DVGGG
Sbjct: 205 QVYRLAHSLPNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVGGG 264
Query: 240 LGIAYHSDHRPPSSSDYASLIHQYFGNLQCKIILEPGRFLVADVGILVTKVISIKKSADK 299
LG+ Y + P S +L+ + + ++I EPGR + A+ G+LVTKV +K + K
Sbjct: 265 LGVVYRDELPPQPSEYAKALLDRLERHRDLELIFEPGRAIAANAGVLVTKVEFLKHTEHK 324
Query: 300 TFVILDVAMNDFMRPTLYDAYHEINYIVNPAGDRLHIHADIVGPICETGDFIALNRKIAL 359
F I+D AMND +RP LY A+ +I + G+ D+VGP+CET DF+ +R + +
Sbjct: 325 NFAIIDAAMNDLIRPALYQAWQDIIPLRPRQGEA--QTYDLVGPVCETSDFLGKDRDL-V 381
Query: 360 PRPGDLLYIEKTGAYGAVQSGTYNSRLLIPEIMVNGSQFHIIRPRMTFQELIELD-SIPA 418
+ GDLL + +GAYG S YN+R + E+MV+G++ +++R R L L+ +P
Sbjct: 382 LQEGDLLAVRSSGAYGFTMSSNYNTRPRVAEVMVDGNKTYLVRQREELSSLWALESVLPE 441